View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9603_low_14 (Length: 226)
Name: NF9603_low_14
Description: NF9603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9603_low_14 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 26611049 - 26611275
Alignment:
| Q |
1 |
aattaaaactt-aaattaatatttttcactctgtacacaacacacatgcataaactttctctgcaacaaaacacattggaaaaaggaagtgaagctcaat |
99 |
Q |
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| T |
26611049 |
aattaaaactttaaattaatatttttcactctgtacacaacacacatgcataaactttctctgcaacaaaacacattggaaaaaggaagtgaaactcaat |
26611148 |
T |
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| Q |
100 |
aaatttttgagctcattctcctgtttgtgaccaaagctgccagcctcagcatgcaccctctttgaatcaattatataatttcttcttttcatgcatggag |
199 |
Q |
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| T |
26611149 |
aaatttttgagctcattctcctgtttgtgaccaaagctgccagcctcagcatgcaccctctttgaatcaattatataatttcttcttttcatgcatggag |
26611248 |
T |
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| Q |
200 |
gaaaaaaggccatttgatgatgatcat |
226 |
Q |
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||||||||||||||||||||||||||| |
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| T |
26611249 |
gaaaaaaggccatttgatgatgatcat |
26611275 |
T |
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