View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9604_low_1 (Length: 690)
Name: NF9604_low_1
Description: NF9604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9604_low_1 |
 | |
|
| [»] scaffold0400 (3 HSPs) |
| | |
|
| [»] scaffold0365 (3 HSPs) |
| | |
|
| [»] scaffold0289 (2 HSPs) |
| | |
|
Alignment Details
Target: scaffold0400 (Bit Score: 572; Significance: 0; HSPs: 3)
Name: scaffold0400
Description:
Target: scaffold0400; HSP #1
Raw Score: 572; E-Value: 0
Query Start/End: Original strand, 18 - 677
Target Start/End: Original strand, 13329 - 13988
Alignment:
| Q |
18 |
aggtcaagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaatt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| || |||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
13329 |
aggtcaagttgtagctgtgaagaaacttcatttattagaacatgaagaaatgtctaatatgaaagcattcaataatgagatccatgctttgacagaaatt |
13428 |
T |
|
| Q |
118 |
cgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacattt |
217 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
13429 |
cgacatcgcaacattgtgaagttatacggcttttgttcacatcgactacactcatttttggtttatgaatttttggagaagggtagcatgtacaacattt |
13528 |
T |
|
| Q |
218 |
tgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctc |
317 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |
|
|
| T |
13529 |
tgaaggacaatgaacaagctgctgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgattgttc |
13628 |
T |
|
| Q |
318 |
gcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaat |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
13629 |
ccctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatatgtagctcatgtctcagacttcggaacatccaagttcctaaat |
13728 |
T |
|
| Q |
418 |
cccaattcatccaatatgacttcttttgcaggcacctttggatatgcagctccaggtcaattccttttcttttatattaattaaaggttataataatttg |
517 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13729 |
cccaattcatccaacatgacttcttttgcaggcacctttggatatgcagctccaggtcaattccttttcttttatattaattaaaggttataataatttg |
13828 |
T |
|
| Q |
518 |
tagttcatttttagtacttacatgtaaaatgtaattatttcacaactatgaaatctacatatcatgctatttttacagaatccaatttttcatgtgataa |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
13829 |
tagttcatttttagtacttacatgtaaaatgtaattatttcacaactatgaaatctacatatcatgctatttttacagaatcatatttttcacgtgataa |
13928 |
T |
|
| Q |
618 |
ctctttttaaatttctacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13929 |
ctctttttaaatttccacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
13988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 22 - 489
Target Start/End: Original strand, 7033 - 7500
Alignment:
| Q |
22 |
caagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaattcgac |
121 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||| ||| | || ||||||||||| ||| ||| ||||||||| ||||| || ||||| || | |
|
|
| T |
7033 |
caagttgtagcggtgaagaaactccattcattacaaaatggagagacgtccaatctgaaagctttcgcaagtgagatccaagctttaactgaaatccggc |
7132 |
T |
|
| Q |
122 |
atcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacattttgaa |
221 |
Q |
| |
|
|||| |||||||||| ||||||||||| ||||||||||| | | |||||||||||||||||||| ||||||||||| || || ||||||| |||||||| |
|
|
| T |
7133 |
atcgaaacattgtgaagttatacgggtattgttcacatccattgcactcatttttggtttatgagttcttggagaaaggcagtgtggacaagattttgaa |
7232 |
T |
|
| Q |
222 |
ggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctcgcct |
321 |
Q |
| |
|
|||||||| ||||| | | || ||||||||| |||||| ||| |||||||| | |||||||||| |||| |||| ||||||| | ||||| ||| |
|
|
| T |
7233 |
agacaatgaccaagcaattaagttgaattggaataggagggtaaatgccattaaaggtgtagctaatgctttatgctatatgcatcacaattgctcacct |
7332 |
T |
|
| Q |
322 |
cctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaatccca |
421 |
Q |
| |
|
| ||||||||||| ||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||| |||||| ||||||| || |||||| |
|
|
| T |
7333 |
tcaattgttcatcgtgatatatccagcaagaatgttgttttggatttggaatatgtggctcatgtctcagacttcggaacagccaagtttcttaatcccg |
7432 |
T |
|
| Q |
422 |
attcatccaatatgacttcttttgcaggcacctttggatatgcagctccaggtcaattccttttcttt |
489 |
Q |
| |
|
|||| |||||| ||| | ||||| ||| |||||||||||||| ||||||||| |||| ||||||||| |
|
|
| T |
7433 |
attcttccaattggacctgttttgtaggaacctttggatatgctgctccaggttaatttcttttcttt |
7500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 633 - 677
Target Start/End: Original strand, 7571 - 7615
Alignment:
| Q |
633 |
tacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
7571 |
tacagaacttgcatacacaatggaagtaaatgagaagtgtgatgt |
7615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365 (Bit Score: 572; Significance: 0; HSPs: 3)
Name: scaffold0365
Description:
Target: scaffold0365; HSP #1
Raw Score: 572; E-Value: 0
Query Start/End: Original strand, 18 - 677
Target Start/End: Original strand, 13972 - 14631
Alignment:
| Q |
18 |
aggtcaagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaatt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| || |||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
13972 |
aggtcaagttgtagctgtgaagaaacttcatttattagaacatgaagaaatgtctaatatgaaagcattcaataatgagatccatgctttgacagaaatt |
14071 |
T |
|
| Q |
118 |
cgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacattt |
217 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
14072 |
cgacatcgcaacattgtgaagttatacggcttttgttcacatcgactacactcatttttggtttatgaatttttggagaagggtagcatgtacaacattt |
14171 |
T |
|
| Q |
218 |
tgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctc |
317 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |
|
|
| T |
14172 |
tgaaggacaatgaacaagctgctgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgattgttc |
14271 |
T |
|
| Q |
318 |
gcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaat |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
14272 |
ccctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatatgtagctcatgtctcagacttcggaacatccaagttcctaaat |
14371 |
T |
|
| Q |
418 |
cccaattcatccaatatgacttcttttgcaggcacctttggatatgcagctccaggtcaattccttttcttttatattaattaaaggttataataatttg |
517 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14372 |
cccaattcatccaacatgacttcttttgcaggcacctttggatatgcagctccaggtcaattccttttcttttatattaattaaaggttataataatttg |
14471 |
T |
|
| Q |
518 |
tagttcatttttagtacttacatgtaaaatgtaattatttcacaactatgaaatctacatatcatgctatttttacagaatccaatttttcatgtgataa |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
14472 |
tagttcatttttagtacttacatgtaaaatgtaattatttcacaactatgaaatctacatatcatgctatttttacagaatcatatttttcacgtgataa |
14571 |
T |
|
| Q |
618 |
ctctttttaaatttctacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14572 |
ctctttttaaatttccacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
14631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 22 - 489
Target Start/End: Original strand, 7677 - 8144
Alignment:
| Q |
22 |
caagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaattcgac |
121 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||| ||| | || ||||||||||| ||| ||| ||||||||| ||||| || ||||| || | |
|
|
| T |
7677 |
caagttgtagcggtgaagaaactccattcattacaaaatggagagacgtccaatctgaaagctttcgcaagtgagatccaagctttaactgaaatccggc |
7776 |
T |
|
| Q |
122 |
atcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacattttgaa |
221 |
Q |
| |
|
|||| |||||||||| ||||||||||| ||||||||||| | | |||||||||||||||||||| ||||||||||| || || ||||||| |||||||| |
|
|
| T |
7777 |
atcgaaacattgtgaagttatacgggtattgttcacatccattgcactcatttttggtttatgagttcttggagaaaggcagtgtggacaagattttgaa |
7876 |
T |
|
| Q |
222 |
ggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctcgcct |
321 |
Q |
| |
|
|||||||| ||||| | | || ||||||||| |||||| ||| |||||||| | |||||||||| |||| |||| ||||||| | ||||| ||| |
|
|
| T |
7877 |
agacaatgaccaagcaattaagttgaattggaataggagggtaaatgccattaaaggtgtagctaatgctttatgctatatgcatcacaattgctcacct |
7976 |
T |
|
| Q |
322 |
cctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaatccca |
421 |
Q |
| |
|
| ||||||||||| ||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||| |||||| ||||||| || |||||| |
|
|
| T |
7977 |
tcaattgttcatcgtgatatatccagcaagaatgttgttttggatttggaatatgtggctcatgtctcagacttcggaacagccaagtttcttaatcccg |
8076 |
T |
|
| Q |
422 |
attcatccaatatgacttcttttgcaggcacctttggatatgcagctccaggtcaattccttttcttt |
489 |
Q |
| |
|
|||| |||||| ||| | ||||| ||| |||||||||||||| ||||||||| |||| ||||||||| |
|
|
| T |
8077 |
attcttccaattggacctgttttgtaggaacctttggatatgctgctccaggttaatttcttttcttt |
8144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 633 - 677
Target Start/End: Original strand, 8215 - 8259
Alignment:
| Q |
633 |
tacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
8215 |
tacagaacttgcatacacaatggaagtaaatgagaagtgtgatgt |
8259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 464; Significance: 0; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 18 - 677
Target Start/End: Complemental strand, 14532316 - 14531638
Alignment:
| Q |
18 |
aggtcaagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaatt |
117 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
14532316 |
aggtcaagttgttgctgtgaagaaacttcactcattacaaaatgaagaaatgtctaatctgaaagcattcacaaatgagatccatgctttgaaagaaatt |
14532217 |
T |
|
| Q |
118 |
cgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacattt |
217 |
Q |
| |
|
||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
14532216 |
cgacatcgcaatattgtgaagttatacggcttttgttcacatcgactacactcatttttggtttatgaattcttggaaaagggtagcatggacaacattt |
14532117 |
T |
|
| Q |
218 |
tgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctc |
317 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| |||| |||||| |||||||||||||| |
|
|
| T |
14532116 |
tgaaggacaatgaacaagctgctgaatttgattggaataggagggtgaatgtcattaaagatatagctaatgctttatgctatctacatcatgactgctc |
14532017 |
T |
|
| Q |
318 |
gcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaat |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| |
|
|
| T |
14532016 |
acctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagacttcggaacatccaagtttctgaat |
14531917 |
T |
|
| Q |
418 |
cccaattcatccaatatgacttcttttgcaggcacctttggatatgcagctccaggtcaattccttttcttttatattaattaaaggttataataatttg |
517 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
14531916 |
cccaactcatccaatatgacttcttttgcaggcacctttggatatgcagctccaggtcaattccttttcttttatattaatt-aaggttataatattttg |
14531818 |
T |
|
| Q |
518 |
tagttcatttttagtacttacatgtaaaatgtaattatttcacaactatgaaa--------------------tctacatatcatgctatttttacagaa |
597 |
Q |
| |
|
|| ||||| ||| ||| ||||||||||||||||||||||| | |||||| || | || |||| ||||||||||||||||| |
|
|
| T |
14531817 |
ta-ttcataattaatacctacatgtaaaatgtaattatttcgcgactatgtaagtactaaagattttctagattttatatataatgctatttttacagaa |
14531719 |
T |
|
| Q |
598 |
tccaatttttcatgtgataactc-tttttaaatttctacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14531718 |
tcctatttttcacgtgataactcttttttaaatttctacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
14531638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 18 - 677
Target Start/End: Original strand, 15037560 - 15038217
Alignment:
| Q |
18 |
aggtcaagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaatt |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
15037560 |
aggtcaagttgtagctgtgaagaaacttcattcattacaaaatgaggaaatgtctaatctgaaatctttcacaaatgagatccatgctttgacagaaatt |
15037659 |
T |
|
| Q |
118 |
cgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacattt |
217 |
Q |
| |
|
||||||||||||||||| | |||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
15037660 |
cgacatcgcaacattgttaagttatatgggttttgttcacatcgactacactcgtttttggtttatgaattcttggcgaagggtagcatggacaacattt |
15037759 |
T |
|
| Q |
218 |
tgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctc |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| ||||||||||||||| || || |
|
|
| T |
15037760 |
tgaaggacaatgaacaagctggtgaatttgattggaataagagagtgaatatcattaaggatatagctaatgctttatgctatctgcatcatgattgttc |
15037859 |
T |
|
| Q |
318 |
gcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaat |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
15037860 |
ccctcctattgttcatcgagatatatccagcaagaatgttattttggatatggaatatgtagctcatgtctcagactttggaacatctaagtttctaaat |
15037959 |
T |
|
| Q |
418 |
cccaattcatccaatatgacttcttttgcaggcacctttggatatgcagctccaggtcaattccttttcttttatattaattaaaggttataataatttg |
517 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||| ||||||||| |||| |
|
|
| T |
15037960 |
cccaactcatccaatatgtcttcttttgcaggcacctttggatatgctgctccaggtcaattccctt--ttttatattaattaaa-gttataatattttg |
15038056 |
T |
|
| Q |
518 |
tagttcatttttagtacttacatgtaaaatgtaattatttcacaactatgaaatctacatatcatgctatttttacagaatccaatttttcatgtgat-a |
616 |
Q |
| |
|
|| || || ||||||||||||| |||||||| ||||||||||||| | | ||||||||| ||||| | | |||| |||||| |||||||| |||| | |
|
|
| T |
15038057 |
tactttatctttagtacttacaggtaaaatgaaattatttcacaattgtctaatctacatttcatgttttgtttatggaatcctatttttcacatgataa |
15038156 |
T |
|
| Q |
617 |
actctttttaaatttctacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15038157 |
aatctttttaaatttctacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
15038217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 18 - 677
Target Start/End: Original strand, 15011541 - 15012207
Alignment:
| Q |
18 |
aggtcaagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaatt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
15011541 |
aggtcaagttgtagctgtgaagaaacttcactcattacaaaatgaagaaatgccaaatcggaaagctttcacaaatgagatccatgctttgacagaaatt |
15011640 |
T |
|
| Q |
118 |
cgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacattt |
217 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
15011641 |
cgacatcgcaacattgtgaagttatacggcttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcttggacaacattt |
15011740 |
T |
|
| Q |
218 |
tgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctc |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15011741 |
tgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatattattaaagatatagctaatgccttattctatctgcatcatgactgctc |
15011840 |
T |
|
| Q |
318 |
gcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaat |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
15011841 |
gcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatatgtagctcatgtctcagactttggaacatctaagtttctaaat |
15011940 |
T |
|
| Q |
418 |
cccaattcatccaatatgacttcttttgcaggcacctttggatatgcagctccaggtcaattccttttc--------ttttatattaattaaaggttata |
509 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
15011941 |
cccaattcatccaatatgacttcttttgcaggcacctttggatatgccgctccaggtcaattccttttcattcttttttttatattaatt-aaggttata |
15012039 |
T |
|
| Q |
510 |
ataatttgtagttcatttttagtacttacatgtaaaatgtaattatttcacaactatgaaatctacatatcatgctatttttacagaatccaatttttca |
609 |
Q |
| |
|
|| |||||||||| || ||||||| ||||||||||||| | |||| ||||| | | ||||||||| ||||| | | |||| |||| ||||| || |
|
|
| T |
15012040 |
at-atttgtagtttatctttagtagttacatgtaaaatagagttataacacaattgtctaatctacatttcatgttttgtttatggaattatattttaca |
15012138 |
T |
|
| Q |
610 |
tgtgataactctt-tttaaatttctacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
|||||||||| ||| ||| | ||||||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
15012139 |
cacgataactcttctttgaatgtttacagaacttgcatacacaatggaagtaaataagaaatgcgatgt |
15012207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 18 - 677
Target Start/End: Original strand, 15002648 - 15003319
Alignment:
| Q |
18 |
aggtcaagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaatt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||| | ||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
15002648 |
aggtcaagttgtagctgtgaagaaacttcactcattacaaaatgaagaaatgccaaataggaaagctttcacaaatgagatccatgctttgacagaaatt |
15002747 |
T |
|
| Q |
118 |
cgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacattt |
217 |
Q |
| |
|
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
15002748 |
cgacatcgcaacattgtgaagttatacggcttttgttcacatcgactacactcatttttggtttatgaattcttggcgaagggtagcatggacaacattt |
15002847 |
T |
|
| Q |
218 |
tgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctc |
317 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| || || |
|
|
| T |
15002848 |
tgaaggacaatgaacaagctggcgaatttgattggaataagagggtgaatatcattaaagatgtagctaatgctttatgctatctgcatcatgattgttc |
15002947 |
T |
|
| Q |
318 |
gcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaat |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||| |
|
|
| T |
15002948 |
ccctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatatgtagctcatgtctcagattttggaacatctaagtttctaaat |
15003047 |
T |
|
| Q |
418 |
cccaattcatccaatatgacttcttttgcaggcacctttggatatgcagctccaggtcaattccttttc-------------ttttatattaattaaagg |
504 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
15003048 |
cccaattcgtccaatatgacttcttttgcaggcacctttggatatgctgctccaggtcaattccttttcattctttttttttttttatattaatt-aagg |
15003146 |
T |
|
| Q |
505 |
ttataataatttgtagttcatttttagtacttacatgtaaaatgtaattatttcacaactatgaaatctacatatcatgctatttttacagaatccaatt |
604 |
Q |
| |
|
||||||| |||||||||| || ||||||| ||||||||||||| | |||| ||||| | | | ||||||| ||||| | | |||| |||| ||| |
|
|
| T |
15003147 |
ttataat-atttgtagtttatctttagtagttacatgtaaaatagagttataacacaattgtctactctacatttcatgttttgtttatggaattatatt |
15003245 |
T |
|
| Q |
605 |
tttcatgtgataactctt-tttaaatttctacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
|| || |||||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15003246 |
ttacacacgataactcttctttgaatgtttacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
15003319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 18 - 677
Target Start/End: Original strand, 15032993 - 15033638
Alignment:
| Q |
18 |
aggtcaagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaatt |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
15032993 |
aggtcaagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatgcctaatctgaaagctttcacaaatgagatccatgctttgacagaaatt |
15033092 |
T |
|
| Q |
118 |
cgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacattt |
217 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
15033093 |
cgacatcgcaacattgtgaagttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacatcattt |
15033192 |
T |
|
| Q |
218 |
tgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctc |
317 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| ||||||| || | |||||||||||||||||||| |||| |||| |||||||||| || || |
|
|
| T |
15033193 |
tgaaggacaatgaacaagctcctgaatttgattggaataggagggtggatgttattaaagatatagctaatgctttatgctatatgcatcatgattgttc |
15033292 |
T |
|
| Q |
318 |
gcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaat |
417 |
Q |
| |
|
||| | ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || ||| |
|
|
| T |
15033293 |
accttcaattgttcatcgcgatatatccagcaagaatgtcattttggatttggaatatgtagctcatgtctcagactttggaacatctaagtttctcaat |
15033392 |
T |
|
| Q |
418 |
cccaattcatccaatatgacttcttttgcaggcacctttggatatgcagctccaggtcaattccttttcttttatattaattaaaggttataataatttg |
517 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| ||||| | |||| ||||||| ||||||| |||| |||| |
|
|
| T |
15033393 |
cccaattcatccaatatgacttcttttgcaggcacttttggatatactgctccaggtgaattc----tttttttcattaatt-aaggttaaaatattttg |
15033487 |
T |
|
| Q |
518 |
tagttcatttttagtac-ttacatgtaaaatgtaattatttcacaactatgaaatctacatatcatgctat-ttttacagaatccaatttttcatgtgat |
615 |
Q |
| |
|
||||| || |||||||| ||||||||||||| |||||||||||| |||||||||| | ||| | | |||| || ||||| |||||||| || |
|
|
| T |
15033488 |
tagtttatctttagtactttacatgtaaaatctaattatttcac-------aaatctacatttaatgttttgtttttca-aatcctatttttca---cat |
15033576 |
T |
|
| Q |
616 |
aactctttttaaatttctacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
|| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15033577 |
aaatatttgtaaatttctacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
15033638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 18 - 490
Target Start/End: Original strand, 15017656 - 15018128
Alignment:
| Q |
18 |
aggtcaagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaatt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
15017656 |
aggtcaagttgtagctgtgaagaaacttcatttattacaaaatgaagaaatgtctaatatgaaagctttcacaaatgagattcatgctttgacagaaatt |
15017755 |
T |
|
| Q |
118 |
cgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacattt |
217 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
15017756 |
cgacatcgcaacattgtgaagttatacgggttttgtttacatcgactacactcatttttggtttatgaattcttggagaagggtagtgtggacatcattt |
15017855 |
T |
|
| Q |
218 |
tgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctc |
317 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| || || |
|
|
| T |
15017856 |
tgaaggacaatgaacaagctgctgaatttgattggaataagagggtgaatattattaaagatatagctaatgccttatgctatctgcatcatgattgttc |
15017955 |
T |
|
| Q |
318 |
gcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaat |
417 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||| |
|
|
| T |
15017956 |
ccctcctatagttcatcgagatatatccagcaagaatgttattttggatttggaatatgtagctcatgtctcagattttggaacatctaagtttctaaat |
15018055 |
T |
|
| Q |
418 |
cccaattcatccaatatgacttcttttgcaggcacctttggatatgcagctccaggtcaattccttttctttt |
490 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||| |||| |
|
|
| T |
15018056 |
cccaattcatccaatatgacttcttttgcaggcacctttggatatgctgctccaggtcagtcccttttttttt |
15018128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 19 - 677
Target Start/End: Original strand, 15041129 - 15041778
Alignment:
| Q |
19 |
ggtcaagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaattc |
118 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||| ||| ||||| ||| |||||||||| ||||| || ||| | |||| ||||| ||||||||| | |
|
|
| T |
15041129 |
ggtcaagtggtagctgtgaagaaactccattcactaccaaatggagatgtatctaatctaaaagcttttgcaagttagattagtgcttagacagaaatcc |
15041228 |
T |
|
| Q |
119 |
gacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacatttt |
218 |
Q |
| |
|
|||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15041229 |
gacatcgcaacattgtaaagttatatgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacatttt |
15041328 |
T |
|
| Q |
219 |
gaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctcg |
318 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||| |||| |||||| |||||||| || || |
|
|
| T |
15041329 |
gaaggacaatgaacaagctagtgaatttgattggaatagaagggtgaatgtcattaaagatatagctaatgctttatgctatctacatcatgattgttcc |
15041428 |
T |
|
| Q |
319 |
cctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaatc |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
15041429 |
cctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatatgtagctcatgtctcagactttggaacatctaagtttttaaatc |
15041528 |
T |
|
| Q |
419 |
ccaattcatccaatatgacttcttttgcag--gcacctttggatatgcagctccaggtcaattccttttcttttatattaattaaaggttataataattt |
516 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||| || |||||| |||||| || ||||||||||||| |||||||||||| ||| |
|
|
| T |
15041529 |
ccaattcatccaatatgacttcttttgcaggcgcacctttggatatgctgcaccaggtgaattccctt--ttttatattaatt-aaggttataatatttt |
15041625 |
T |
|
| Q |
517 |
gtagttcatttttagtacttacatgtaaaatgtaattatttcacaactatgaaatctacatatcatgctatttttacagaatccaatttttcatgtgata |
616 |
Q |
| |
|
|||| | | |||||||||||||||||||||||||| |||| | | |||||||||| ||||| | | |||| |||||| ||| |||| ||||| |
|
|
| T |
15041626 |
gtagctta-------tacttacatgtaaaatgtaattattttacaattgttaaatctacatttcatgttttgtttatggaatcctattattcacatgata |
15041718 |
T |
|
| Q |
617 |
actctttttaaatttctacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
15041719 |
aatctttttaaatttctacagaacttgcatacacaatggaagt-aatgagaaatgtgatgt |
15041778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 18 - 677
Target Start/End: Complemental strand, 14522195 - 14521538
Alignment:
| Q |
18 |
aggtcaagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaatt |
117 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||| ||| ||||| ||| |||||||||| ||||| || || |||||| ||||||||||||||| |
|
|
| T |
14522195 |
aggtcaagtggtagctgtgaagaaactccattcactaccaaatggagatgtatctaatctaaaagcttttgcaggtgagattagtgctttgacagaaatc |
14522096 |
T |
|
| Q |
118 |
cgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacattt |
217 |
Q |
| |
|
||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
14522095 |
cgacatcgcaacattgtaaagttatatgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcttggacaacattt |
14521996 |
T |
|
| Q |
218 |
tgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctc |
317 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
14521995 |
tgaaggacaatgaacaagctagtgaatttgattggagtaggagggtgaatatcattaaagatatagctaatgctttattctatctacatcatgactgctc |
14521896 |
T |
|
| Q |
318 |
gcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaat |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
14521895 |
acctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatgtgtagctcatgtctcagactttggaacatctaagtttctaaat |
14521796 |
T |
|
| Q |
418 |
cccaattcatccaatatgacttcttttgcaggcacctttggatatgcagctccaggtcaattccttttct-tttatattaattaaaggttataataattt |
516 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| | |||||||||| | ||| |||| | |||| |
|
|
| T |
14521795 |
cccaattcatcgaatatgacttcttttgcaggcacctttggatatgctgctccaggtcaactccttttttgtttatattaact-aagtttat-agcattt |
14521698 |
T |
|
| Q |
517 |
gtagttcatttttagtacttacatgtaaaatgtaattatttcacaactatgaaatctacatatcatgctatttttacagaatccaatttttcatgtgata |
616 |
Q |
| |
|
||||| || |||||| |||| |||||||||||| |||||||||| | | | |||| || ||||| | | ||||| ||| || |||||||| |||| |
|
|
| T |
14521697 |
ttagtttatctttagtgtttacttgtaaaatgtaactatttcacaattgtctagtctatatttcatg-tttatttacggaa-cctatttttcacacgata |
14521600 |
T |
|
| Q |
617 |
actctt-tttaaatttctacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
|||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14521599 |
actcttctttaaatgtttacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
14521538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 18 - 474
Target Start/End: Original strand, 14468344 - 14468803
Alignment:
| Q |
18 |
aggtcaagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaatt |
117 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||| |||||| || |||||||||||||| ||| ||||||||| ||||| |||||||| |
|
|
| T |
14468344 |
aggtcaagttgtagctgtgaagaaactccattcattacaaaatggagaaatgtccaatctgaaagcatttgcaagtgagatccaagctttaacagaaatc |
14468443 |
T |
|
| Q |
118 |
cgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacattt |
217 |
Q |
| |
|
|||||||| |||||||||| ||||| ||| | ||||||||||| | | |||||||||||||||||||| |||||||| ||||||||| ||||||| |||| |
|
|
| T |
14468444 |
cgacatcgaaacattgtgaagttatgcggttattgttcacatccattgcactcatttttggtttatgagttcttggaaaagggtagcgtggacaagattt |
14468543 |
T |
|
| Q |
218 |
tgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctc |
317 |
Q |
| |
|
|||| || |||| |||||| | ||||| ||||||| |||||||||| ||||||| ||| |||||||||| ||| ||| |||||||||| |||| |
|
|
| T |
14468544 |
tgaaagaagatgagcaagctactatgtttgactggaataggagggtgaatgtcattaaggatgtagctaatgcactatactacatgcatcatgatcgctc |
14468643 |
T |
|
| Q |
318 |
gcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaat |
417 |
Q |
| |
|
|| | ||||||||||| ||||||||||| |||||| || |||||||||||||||| || |||||||||||||| || |||||| | ||||| || ||| |
|
|
| T |
14468644 |
accatcaattgttcatcgcgatatatccagtaagaatattgttttggatttggaatatgtggctcatgtctcagatttcggaacagctaagtttctcaat |
14468743 |
T |
|
| Q |
418 |
cccaattcatccaatatgacttc---ttttgcaggcacctttggatatgcagctccaggt |
474 |
Q |
| |
|
|||||| | |||||| ||| || ||||| ||||||||||||||| | ||||||||| |
|
|
| T |
14468744 |
cccaatgcttccaattggacctctaattttgtaggcacctttggatacactgctccaggt |
14468803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 25 - 420
Target Start/End: Original strand, 14483299 - 14483694
Alignment:
| Q |
25 |
gttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaattcgacatc |
124 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |||||| || ||||||||||| || ||| ||||||||| |||| ||||||| ||||||| |
|
|
| T |
14483299 |
gttgtagctgtgaagaaactccattcattacaaaatggagaaatgtccaatctgaaagcttttgcaagtgagatccaacctttagcagaaatccgacatc |
14483398 |
T |
|
| Q |
125 |
gcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacattttgaagga |
224 |
Q |
| |
|
| |||||||||| ||||||||||| ||||||||||| | | |||||||||||||||||||| ||||||||||||||||| |||| || |||||||| || |
|
|
| T |
14483399 |
gaaacattgtgaagttatacgggtattgttcacatctattgcactcatttttggtttatgagttcttggagaagggtagtctggataagattttgaaaga |
14483498 |
T |
|
| Q |
225 |
caatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctcgcctcct |
324 |
Q |
| |
|
| |||| |||||| || |||| ||||||| |||||||| | |||||||||| |||||||||| |||| ||| |||||||||| |||| ||| | |
|
|
| T |
14483499 |
cgatgagcaagctactgtgtttggctggaataggagggtgattgccattaaagatgtagctaatgctttatactacatgcatcatgatcgctcaccttca |
14483598 |
T |
|
| Q |
325 |
attgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaatccc |
420 |
Q |
| |
|
|| |||||||| ||||||||||| |||||| || |||||||||||||||| || |||||||||||||| || |||||| | ||||| || |||||| |
|
|
| T |
14483599 |
atagttcatcgcgatatatccagtaagaatattgttttggatttggaatatgtggctcatgtctcagatttcggaacagctaagtttcttaatccc |
14483694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 25 - 489
Target Start/End: Original strand, 14504530 - 14504997
Alignment:
| Q |
25 |
gttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaattcgacatc |
124 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |||||| || ||| ||||||| || ||| |||||| | ||||| ||||||| ||||||| |
|
|
| T |
14504530 |
gttgtagctgtgaagaaactccattcattacaaaatggagaaatgtccaatttgaaagcttttgcaagtgagataaaagctttaacagaaagccgacatc |
14504629 |
T |
|
| Q |
125 |
gcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacattttgaagga |
224 |
Q |
| |
|
| |||||||||| ||||||||||| ||||||||||| | | |||||||||||||||||||| |||||||||||||| || |||| || |||||||| || |
|
|
| T |
14504630 |
gaaacattgtgaagttatacgggtattgttcacatccattgcactcatttttggtttatgagttcttggagaagggcagtctggataagattttgaaaga |
14504729 |
T |
|
| Q |
225 |
caatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctcgcctcct |
324 |
Q |
| |
|
| |||| ||||| | ||||||||||||||||||||||| |||||||||| |||||||||| |||| ||| |||||||||| |||| ||| | |
|
|
| T |
14504730 |
cgatgagcaagccactatgtttgattggaataagagggtgaaatccattaaagatgtagctaatgctttatactacatgcatcatgatcgctcacctgca |
14504829 |
T |
|
| Q |
325 |
attgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaatcccaatt |
424 |
Q |
| |
|
||||||||||| |||||||| || |||||| || |||||||||||||||| || ||||||||||| || || |||||| | ||||| || |||||| || |
|
|
| T |
14504830 |
attgttcatcgcgatatatcgagtaagaatattgttttggatttggaatatgtggctcatgtctcggatttcggaacagctaagtttcttaatcccgatg |
14504929 |
T |
|
| Q |
425 |
catccaatatgacttct---tttgcaggcacctttggatatgcagctccaggtcaattccttttcttt |
489 |
Q |
| |
|
| |||||| ||| ||| |||| |||||| |||||||| | ||||||||| |||| | ||||||| |
|
|
| T |
14504930 |
cttccaattggacctctaactttgtaggcacgtttggatacactgctccaggttaatttcctttcttt |
14504997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 633 - 677
Target Start/End: Original strand, 14468896 - 14468940
Alignment:
| Q |
633 |
tacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14468896 |
tacagaacttgcatacacaatggaagtaaatgagaagtgtgatgt |
14468940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 632 - 677
Target Start/End: Original strand, 14505147 - 14505192
Alignment:
| Q |
632 |
ctacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
14505147 |
ctacagaacttgcatatacaatggaagtaaatgagaagtgtgatgt |
14505192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 113; Significance: 7e-57; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 18 - 402
Target Start/End: Original strand, 14606445 - 14606829
Alignment:
| Q |
18 |
aggtcaagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaatt |
117 |
Q |
| |
|
||||||||| || |||||||| || || |||||| || ||||| ||||| | ||||| ||| ||||||||||||||||||| ||| |||| |||||| |
|
|
| T |
14606445 |
aggtcaagtagttgctgtgaaaaagctccattcagtagcaaatggagaaaatccaaatctaaaatcattcacaaatgagatccaagctctgaccgaaatt |
14606544 |
T |
|
| Q |
118 |
cgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacattt |
217 |
Q |
| |
|
|||||||| || ||||||| ||| || || ||||| |||||| || ||||||||||||||||| || | ||||| ||||| |||| || |||| |
|
|
| T |
14606545 |
cgacatcgtaatattgtgaagttgtatggattttgctcacattcacagttgtcatttttggtttatgagtttgtagagaaaggtagtttggaaaagattt |
14606644 |
T |
|
| Q |
218 |
tgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctc |
317 |
Q |
| |
|
|||| || ||||| |||| || ||||||||||||||||||||||||| ||||||||||| |||| ||||| |||| ||| |||||||||| ||||| |
|
|
| T |
14606645 |
tgaaagatgatgaagaagcaattgcatttgattggaataagagggtgaatgtcattaaagatgtagccaatgctttatgctacatgcatcatgattgctc |
14606744 |
T |
|
| Q |
318 |
gcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaaca |
402 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||| || || |||||| ||||| || | ||||||||| |||||||||||| |
|
|
| T |
14606745 |
gcctccaattgttcatcgagatatatcaagcaagaatattcttctggattcggaatgtgtgggtcatgtctctgactttggaaca |
14606829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 18 - 402
Target Start/End: Original strand, 16025622 - 16026006
Alignment:
| Q |
18 |
aggtcaagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaatt |
117 |
Q |
| |
|
||||||||| || |||||||| || || |||||| || ||||| ||||| | ||||| ||| ||||||||||||||||||| ||| |||| |||||| |
|
|
| T |
16025622 |
aggtcaagtagttgctgtgaaaaagctccattcagtagcaaatggagaaaatccaaatctaaaatcattcacaaatgagatccaagctctgaccgaaatt |
16025721 |
T |
|
| Q |
118 |
cgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaattcttggagaagggtagcatggacaacattt |
217 |
Q |
| |
|
|||||||| || ||||||| ||| || || ||||| |||||| || ||||||||||||||||| || | ||||| ||||| |||| || |||| |
|
|
| T |
16025722 |
cgacatcgtaatattgtgaagttgtatggattttgctcacattcacagttgtcatttttggtttatgagtttgtagagaaaggtagtttggaaaagattt |
16025821 |
T |
|
| Q |
218 |
tgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctc |
317 |
Q |
| |
|
|||| || ||||| |||| || ||||||||||||||||||||||||| ||||||||||| |||| ||||| |||| ||| |||||||||| ||||| |
|
|
| T |
16025822 |
tgaaagatgatgaagaagcaattgcatttgattggaataagagggtgaatgtcattaaagatgtagccaatgctttatgctacatgcatcatgattgctc |
16025921 |
T |
|
| Q |
318 |
gcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaaca |
402 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||| || || |||||| ||||| || | ||||||||| |||||||||||| |
|
|
| T |
16025922 |
gcctccaattgttcatcgagatatatcaagcaagaatattcttctggattcggaatgtgtgggtcatgtctctgactttggaaca |
16026006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 85 - 474
Target Start/End: Original strand, 17849136 - 17849525
Alignment:
| Q |
85 |
ttcacaaatgagatccatgctttgacagaaattcgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatg |
184 |
Q |
| |
|
||||||| ||||||||| ||||||| ||||||||||||||| |||||||||| | | || || ||||||| ||| || | ||||||||||||||| | |
|
|
| T |
17849136 |
ttcacaagtgagatccaagctttgatagaaattcgacatcgtaacattgtgaagctgtatggattttgtttgcattcacgattctcatttttggtttacg |
17849235 |
T |
|
| Q |
185 |
aattcttggagaagggtagcatggacaacattttgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagc |
284 |
Q |
| |
|
| ||| ||| || || || | || ||||||||||| || |||| ||||| || |||||||||||||||| |||||||| ||||||||||| |||| |
|
|
| T |
17849236 |
atttcatgggaaaaggaagtgtagataacattttgaaagatgatgatcaagcaattgcatttgattggaataagcgggtgaatgtcattaaagatgtagc |
17849335 |
T |
|
| Q |
285 |
taatgccttattctatctgcatcatgactgctcgcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcat |
384 |
Q |
| |
|
|||||| ||| ||| |||||||| | ||||| ||||| |||||||||||||||||||| ||||||||| | || | || |||||||| ||||||||| |
|
|
| T |
17849336 |
taatgctctatgttatatgcatcatcattgctcacctccgattgttcatcgagatatatcaagcaagaatatacttctagacttggaatatgtagctcat |
17849435 |
T |
|
| Q |
385 |
gtctcagactttggaacatccaagttcctaaatcccaattcatccaatatgacttcttttgcaggcacctttggatatgcagctccaggt |
474 |
Q |
| |
|
||||| |||||||||| | | || | |||||||| ||||| ||||| ||| || |||||||| ||| |||||||||| ||||||||| |
|
|
| T |
17849436 |
gtctctgactttggaatagctaaacttctaaatcctgattcaaccaattggacctcatttgcaggaaccattggatatgctgctccaggt |
17849525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 89 - 474
Target Start/End: Complemental strand, 15664742 - 15664357
Alignment:
| Q |
89 |
caaatgagatccatgctttgacagaaattcgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaatt |
188 |
Q |
| |
|
||||||||||||| | | ||||||||||||| ||||| |||||||||| | |||| || ||||||||||| || || ||||||||||| || || |
|
|
| T |
15664742 |
caaatgagatccaagttctgacagaaattcggcatcgtaacattgtgaagctatatggattttgttcacacacacacttgtcgtttttggtttacgagtt |
15664643 |
T |
|
| Q |
189 |
cttggagaagggtagcatggacaacattttgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaat |
288 |
Q |
| |
|
| ||||||| ||||| |||| || |||||||| || ||||| |||| || ||||| |||||| |||||||||||| | |||||||||||||| ||| |
|
|
| T |
15664642 |
catggagaaaggtagtttggaaaagattttgaatgatgatgaagaagcaattgcatttggttggaaaaagagggtgaatgttattaaagatatagcgaat |
15664543 |
T |
|
| Q |
289 |
gccttattctatctgcatcatgactgctcgcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtct |
388 |
Q |
| |
|
|| |||| |||| |||| ||||| ||| | ||||| |||||||||||||||||||| ||||||||| || || ||||||| ||||| || ||| ||||| |
|
|
| T |
15664542 |
gctttatgctatatgcaccatgattgcacccctccaattgttcatcgagatatatcaagcaagaatattcttctggatttagaatatgtggcttgtgtct |
15664443 |
T |
|
| Q |
389 |
cagactttggaacatccaagttcctaaatcccaattcatccaatatgacttcttttgcaggcacctttggatatgcagctccaggt |
474 |
Q |
| |
|
||||||||||||| | ||| | || ||||| |||||| |||| ||| || ||||||||||||| ||||||||| |||||||| |
|
|
| T |
15664442 |
cagactttggaacggctaagcttcttaatcctaattcagacaattggacctcatttgcaggcacctatggatatgcttctccaggt |
15664357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 85 - 402
Target Start/End: Original strand, 16173165 - 16173482
Alignment:
| Q |
85 |
ttcacaaatgagatccatgctttgacagaaattcgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatg |
184 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||||||||| || ||||||| | || || ||||| |||||| || |||||||||||||||| |
|
|
| T |
16173165 |
ttcacaaatgagatccaagctttgactgaaattcgacatcgtaatattgtgaatctgtatggattttgctcacattcacagttgtcatttttggtttatg |
16173264 |
T |
|
| Q |
185 |
aattcttggagaagggtagcatggacaacattttgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagc |
284 |
Q |
| |
|
| || | ||||| ||||| |||| || |||||||| || ||||| |||| || |||| ||||||| ||| |||||||| ||||||||||| |||| |
|
|
| T |
16173265 |
agtttgtagagaaaggtagtttggaaaagattttgaaagatgatgaagaagcaattgcatttaattggaaaaagcgggtgaatgtcattaaagatgtagc |
16173364 |
T |
|
| Q |
285 |
taatgccttattctatctgcatcatgactgctcgcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcat |
384 |
Q |
| |
|
|||||| |||| |||| |||| ||||| ||||||||||| |||||||||||||||||||| ||||||||| || || |||||| |||| || |||||| |
|
|
| T |
16173365 |
taatgctttatgctatatgcaccatgattgctcgcctccaattgttcatcgagatatatcaagcaagaatattcttctggattccgaatgtgtggctcat |
16173464 |
T |
|
| Q |
385 |
gtctcagactttggaaca |
402 |
Q |
| |
|
||||| |||||||||||| |
|
|
| T |
16173465 |
gtctctgactttggaaca |
16173482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 243 - 479
Target Start/End: Complemental strand, 15676423 - 15676187
Alignment:
| Q |
243 |
atttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctcgcctcctattgttcatcgagatata |
342 |
Q |
| |
|
|||||||||||||||| |||||||| | ||||||||| |||||||||| |||| |||| |||| ||||| ||||| ||||| |||||||||||||||||| |
|
|
| T |
15676423 |
atttgattggaataagcgggtgaatgttattaaagatgtagctaatgctttatactatatgcaccatgattgctcacctccaattgttcatcgagatata |
15676324 |
T |
|
| Q |
343 |
tccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaatcccaattcatccaatatgacttctt |
442 |
Q |
| |
|
|| ||||||||| | | ||||||| ||||| || |||| ||||||||||||||||| | | ||| | |||||||| |||||| |||| |||| || | |
|
|
| T |
15676323 |
tcaagcaagaatatcctactggatttagaatatgtggctcgtgtctcagactttggaatagctaagcttctaaatcctaattcaaccaacttgacatcat |
15676224 |
T |
|
| Q |
443 |
ttgcaggcacctttggatatgcagctccaggtcaatt |
479 |
Q |
| |
|
||||||| |||| ||||||||| ||||||||| |||| |
|
|
| T |
15676223 |
ttgcaggtacctatggatatgctgctccaggttaatt |
15676187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 169 - 402
Target Start/End: Original strand, 16103581 - 16103814
Alignment:
| Q |
169 |
tcatttttggtttatgaattcttggagaagggtagcatggacaacattttgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaata |
268 |
Q |
| |
|
||||||||||||||||| ||| | ||||| ||||| |||| || ||||||||||| ||||| |||| || ||||||||||| ||||| |||||| |
|
|
| T |
16103581 |
tcatttttggtttatgagttcgtagagaaaggtagtttggagaaaattttgaaggatgatgaagaagcaattgcgtttgattggaacaagagagtgaatg |
16103680 |
T |
|
| Q |
269 |
tcattaaagatatagctaatgccttattctatctgcatcatgactgctcgcctcctattgttcatcgagatatatccagcaagaatgttattttggattt |
368 |
Q |
| |
|
|| |||||||| |||||||||| |||| ||| |||||||||| ||||||||||| |||||||| |||||||||| ||||||||| || || ||||||| |
|
|
| T |
16103681 |
tccttaaagatgtagctaatgctttatgctacatgcatcatgattgctcgcctccaattgttcacagagatatatcaagcaagaatattcttctggattt |
16103780 |
T |
|
| Q |
369 |
ggaatacgtagctcatgtctcagactttggaaca |
402 |
Q |
| |
|
||||| || |||| |||||| |||||||||||| |
|
|
| T |
16103781 |
agaatatgtggctcgtgtctcggactttggaaca |
16103814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 243 - 481
Target Start/End: Complemental strand, 17825444 - 17825206
Alignment:
| Q |
243 |
atttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctcgcctcctattgttcatcgagatata |
342 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||| | ||||| ||||| |||||||||||||||||| |
|
|
| T |
17825444 |
atttgactggaataagagggtgaatgccattaaagatatagctaatgctgtatgttatatgcatcatcattgctcacctccaattgttcatcgagatata |
17825345 |
T |
|
| Q |
343 |
tccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaacatccaagttcctaaatcccaattcatccaatatgacttctt |
442 |
Q |
| |
|
|| ||||||||| | || | |||||||||| || ||||||||||| |||||||||| | | ||| | || ||||| ||||| ||||| ||| || | |
|
|
| T |
17825344 |
tcaagcaagaatatacttctaaatttggaatatgtggctcatgtctctgactttggaatagctaagcttcttaatcctgattcaaccaattggacctcat |
17825245 |
T |
|
| Q |
443 |
ttgcaggcacctttggatatgcagctccaggtcaattcc |
481 |
Q |
| |
|
||||||| ||| |||||||||| || |||||| |||||| |
|
|
| T |
17825244 |
ttgcaggaaccattggatatgctgcaccaggtaaattcc |
17825206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 633 - 677
Target Start/End: Complemental strand, 15664273 - 15664229
Alignment:
| Q |
633 |
tacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
15664273 |
tacagaacttgcatacacaatggaagtaaatgagaagtgtgatgt |
15664229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 243 - 357
Target Start/End: Original strand, 31058953 - 31059067
Alignment:
| Q |
243 |
atttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctcgcctcctattgttcatcgagatata |
342 |
Q |
| |
|
|||||||||| | |||||||||||| | |||||| | | || ||||| || | ||| |||||||||| |||||||||||||| ||||||| |||||| |
|
|
| T |
31058953 |
atttgattgggaaaagagggtgaatgttgttaaaggtgtggccaatgctttgtcctacttgcatcatgattgctcgcctcctataattcatcgcgatata |
31059052 |
T |
|
| Q |
343 |
tccagcaagaatgtt |
357 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
31059053 |
tcaagcaagaatgtt |
31059067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 31159588 - 31159701
Alignment:
| Q |
243 |
atttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctcgcctcctattgttcatcgagatata |
342 |
Q |
| |
|
|||||||||| | |||||||||||| | |||||| | | || ||||| || | ||| |||||||||| || || ||||||||||||||||| |||||| |
|
|
| T |
31159588 |
atttgattgggaaaagagggtgaatgttgttaaaggtgtggccaatgctttgtcctacttgcatcatgattgttctcctcctattgttcatcgtgatata |
31159687 |
T |
|
| Q |
343 |
tccagcaagaatgt |
356 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
31159688 |
tcgagcaagaatgt |
31159701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 31241691 - 31241804
Alignment:
| Q |
243 |
atttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctcgcctcctattgttcatcgagatata |
342 |
Q |
| |
|
|||||||||| | |||||||||||| | |||||| | | || ||||| || | ||| |||||||||| || || ||||||||||||||||| |||||| |
|
|
| T |
31241691 |
atttgattgggaaaagagggtgaatgttgttaaaggtgtggccaatgctttgtcctacttgcatcatgattgttctcctcctattgttcatcgtgatata |
31241790 |
T |
|
| Q |
343 |
tccagcaagaatgt |
356 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
31241791 |
tcgagcaagaatgt |
31241804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 354
Target Start/End: Original strand, 31103397 - 31103508
Alignment:
| Q |
243 |
atttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctcgcctcctattgttcatcgagatata |
342 |
Q |
| |
|
|||||||||| | |||||||||||| | |||||| | | || ||||| || | ||| |||||||||| ||||| ||||||||| ||||||| |||||| |
|
|
| T |
31103397 |
atttgattgggaaaagagggtgaatgttgttaaaggtgtcgccaatgctttgtcctacttgcatcatgattgctcacctcctattattcatcgtgatata |
31103496 |
T |
|
| Q |
343 |
tccagcaagaat |
354 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
31103497 |
tcgagcaagaat |
31103508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 31140756 - 31140869
Alignment:
| Q |
243 |
atttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctcgcctcctattgttcatcgagatata |
342 |
Q |
| |
|
|||||||||| | |||||||||||| | |||||| | | || ||||| || | ||| |||||||||| || || ||||||||| ||||||| |||||| |
|
|
| T |
31140756 |
atttgattgggaaaagagggtgaatgttgttaaaggtgtggccaatgctttgtcctacttgcatcatgattgttctcctcctattattcatcgtgatata |
31140855 |
T |
|
| Q |
343 |
tccagcaagaatgt |
356 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
31140856 |
tcaagcaagaatgt |
31140869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 357
Target Start/End: Original strand, 31184477 - 31184591
Alignment:
| Q |
243 |
atttgattggaataagagggtgaatatcattaaagatatagctaatgccttattctatctgcatcatgactgctcgcctcctattgttcatcgagatata |
342 |
Q |
| |
|
|||||||||| | |||||||||||| | |||||| | | || ||||| || | ||| ||||||| || ||||| ||||||||||||||||| |||||| |
|
|
| T |
31184477 |
atttgattgggaaaagagggtgaatgttgttaaaggtgtcgccaatgctttgtcctacttgcatcacgattgctcacctcctattgttcatcgtgatata |
31184576 |
T |
|
| Q |
343 |
tccagcaagaatgtt |
357 |
Q |
| |
|
|| || || |||||| |
|
|
| T |
31184577 |
tcgagtaaaaatgtt |
31184591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 17825602 - 17825553
Alignment:
| Q |
85 |
ttcacaaatgagatccatgctttgacagaaattcgacatcgcaacattgt |
134 |
Q |
| |
|
||||||| ||||||||| || ||||||||||||||||||| |||||||| |
|
|
| T |
17825602 |
ttcacaagtgagatccaagcactgacagaaattcgacatcgtaacattgt |
17825553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 633 - 677
Target Start/End: Complemental strand, 15676103 - 15676059
Alignment:
| Q |
633 |
tacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
||||||| ||||||||||||||||||| |||| ||| |||||||| |
|
|
| T |
15676103 |
tacagaatttgcatacacaatggaagtgaatgtgaagtgtgatgt |
15676059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 633 - 677
Target Start/End: Complemental strand, 17825063 - 17825019
Alignment:
| Q |
633 |
tacagaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
||||||| ||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
17825063 |
tacagaatatgcatacacaatgcaagtgaatgagaaatgtgatgt |
17825019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289 (Bit Score: 95; Significance: 4e-46; HSPs: 2)
Name: scaffold0289
Description:
Target: scaffold0289; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 89 - 471
Target Start/End: Complemental strand, 13901 - 13519
Alignment:
| Q |
89 |
caaatgagatccatgctttgacagaaattcgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaatt |
188 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||| | |||||||||| | |||| || | ||||||||| || || ||||||||||| || || |
|
|
| T |
13901 |
caaatgagatcaaagctttgacagaaattcgacattgtaacattgtgaagctatatggatattgttcacactcacacttgtcgtttttggtttacgagtt |
13802 |
T |
|
| Q |
189 |
cttggagaagggtagcatggacaacattttgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaat |
288 |
Q |
| |
|
| ||||||| ||||| |||| || |||||||| || ||||| |||| || ||||| |||||| |||||||||||| | |||||||||||||| ||| |
|
|
| T |
13801 |
catggagaaaggtagtctggaaaagattttgaaagatgatgaagaagcaattgcatttggttggaaaaagagggtgaatgttattaaagatatagcgaat |
13702 |
T |
|
| Q |
289 |
gccttattctatctgcatcatgactgctcgcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtct |
388 |
Q |
| |
|
|| |||| |||| |||| ||||| ||| | ||||| |||||||||||||||||||| ||||||||| || || ||||||| ||||| || |||| ||||| |
|
|
| T |
13701 |
gctttatgctatatgcaccatgattgcacccctccaattgttcatcgagatatatcaagcaagaatattcttctggatttagaatatgtggctcgtgtct |
13602 |
T |
|
| Q |
389 |
cagactttggaacatccaagttcctaaatcccaattcatccaatatgacttcttttgcaggcacctttggatatgcagctcca |
471 |
Q |
| |
|
| |||||||||||| | ||| | || || | |||||| |||| ||| || ||||||||||||| ||||||||| |||||| |
|
|
| T |
13601 |
cggactttggaacagctaagcttcttgatgctaattcagacaattggacctcatttgcaggcacctatggatatgctgctcca |
13519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 89 - 374
Target Start/End: Complemental strand, 5068 - 4783
Alignment:
| Q |
89 |
caaatgagatccatgctttgacagaaattcgacatcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatgaatt |
188 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||| | |||||||||| | |||| || | ||||||||| || || ||||||||||| || || |
|
|
| T |
5068 |
caaatgagatcaaagctttgacagaaattcgacattgtaacattgtgaagctatatggatattgttcacactcacacttgtcgtttttggtttacgagtt |
4969 |
T |
|
| Q |
189 |
cttggagaagggtagcatggacaacattttgaaggacaatgaacaagctggtgaatttgattggaataagagggtgaatatcattaaagatatagctaat |
288 |
Q |
| |
|
| ||||||| ||||| |||| || |||||||| || ||||| |||| || ||||| |||||| |||||||||||| | |||||||||||||| ||| |
|
|
| T |
4968 |
catggagaaaggtagtctggaaaagattttgaaagatgatgaagaagcaattgcatttggttggaaaaagagggtgaatgttattaaagatatagcgaat |
4869 |
T |
|
| Q |
289 |
gccttattctatctgcatcatgactgctcgcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaata |
374 |
Q |
| |
|
|| |||| |||| |||| ||||| ||| | ||||| |||||||||||||||||||| ||||||||| || || ||||||| ||||| |
|
|
| T |
4868 |
gctttatgctatatgcaccatgattgcacccctccaattgttcatcgagatatatcaagcaagaatattcttctggatttagaata |
4783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 65; Significance: 3e-28; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 302 - 474
Target Start/End: Original strand, 17028665 - 17028837
Alignment:
| Q |
302 |
tgcatcatgactgctcgcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaac |
401 |
Q |
| |
|
||||| |||| ||||| ||| | ||||||||||| ||||||||||| ||||||||| |||||||||||||||| || |||||||||||||| || ||||| |
|
|
| T |
17028665 |
tgcatgatgattgctcaccttcaattgttcatcgtgatatatccagtaagaatgttgttttggatttggaatatgttgctcatgtctcagatttcggaac |
17028764 |
T |
|
| Q |
402 |
atccaagttcctaaatcccaattcatccaatatgacttcttttgcaggcacctttggatatgcagctccaggt |
474 |
Q |
| |
|
| | ||||| || |||| | |||| |||||| ||| |||||| ||||||||||||||| | ||||||||| |
|
|
| T |
17028765 |
agctaagtttcttaatctcgattcttccaattggaccgcttttgtaggcacctttggatacactgctccaggt |
17028837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 302 - 474
Target Start/End: Original strand, 17559101 - 17559273
Alignment:
| Q |
302 |
tgcatcatgactgctcgcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaac |
401 |
Q |
| |
|
||||| |||| ||||| ||| | ||||||||||| ||||||||||| ||||||||| |||||||||||||||| || |||||||||||||| || ||||| |
|
|
| T |
17559101 |
tgcatgatgattgctcaccttcaattgttcatcgtgatatatccagtaagaatgttgttttggatttggaatatgttgctcatgtctcagatttcggaac |
17559200 |
T |
|
| Q |
402 |
atccaagttcctaaatcccaattcatccaatatgacttcttttgcaggcacctttggatatgcagctccaggt |
474 |
Q |
| |
|
| | ||||| || |||| | |||| |||||| ||| |||||| ||||||||||||||| | ||||||||| |
|
|
| T |
17559201 |
agctaagtttcttaatctcgattcttccaattggaccgcttttgtaggcacctttggatacactgctccaggt |
17559273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 22 - 185
Target Start/End: Original strand, 17027434 - 17027597
Alignment:
| Q |
22 |
caagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaattcgac |
121 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| || ||||| || ||| ||||||| || ||| ||||||| | ||||| |||||||| |||| |
|
|
| T |
17027434 |
caagttgtagctgtgaagaaactccattcattacaacgtggagaaacgtccaatttgaaagcttttgcaagtgagatcaaagctttaacagaaatccgac |
17027533 |
T |
|
| Q |
122 |
atcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatga |
185 |
Q |
| |
|
|| | ||||||| | ||||||||||| ||||||||||| | | ||||||||||| |||||||| |
|
|
| T |
17027534 |
atagaaacattgctaagttatacgggtattgttcacatccattgcactcatttttagtttatga |
17027597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 22 - 185
Target Start/End: Original strand, 17557926 - 17558089
Alignment:
| Q |
22 |
caagttgtagctgtgaagaaacttcattcattacaaaatgaagaaatatctaatctgaaagcattcacaaatgagatccatgctttgacagaaattcgac |
121 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| || ||||| || ||| ||||||| || ||| ||||||| | ||||| |||||||| |||| |
|
|
| T |
17557926 |
caagttgtagctgtgaagaaactccattcattacaacgtggagaaacgtccaatttgaaagcttttgcaagtgagatcaaagctttaacagaaatccgac |
17558025 |
T |
|
| Q |
122 |
atcgcaacattgtgaggttatacgggttttgttcacatcgactacactcatttttggtttatga |
185 |
Q |
| |
|
|| | ||||||| | ||||||||||| ||||||||||| | | ||||||||||| |||||||| |
|
|
| T |
17558026 |
atagaaacattgctaagttatacgggtattgttcacatccattgcactcatttttagtttatga |
17558089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 636 - 677
Target Start/End: Original strand, 17028971 - 17029012
Alignment:
| Q |
636 |
agaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
17028971 |
agaacttgcatacacaatggaagtaaatgagagatgtgatgt |
17029012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 636 - 677
Target Start/End: Original strand, 17559407 - 17559448
Alignment:
| Q |
636 |
agaacttgcatacacaatggaagtaaatgagaaatgtgatgt |
677 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
17559407 |
agaacttgcatacacaatggaagtaaatgagagatgtgatgt |
17559448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 37027592 - 37027692
Alignment:
| Q |
302 |
tgcatcatgactgctcgcctcctattgttcatcgagatatatccagcaagaatgttattttggatttggaatacgtagctcatgtctcagactttggaac |
401 |
Q |
| |
|
||||||||| ||| | ||||||||||||||||| || ||||| ||||| |||||| |||| |||||||| | | |||| | |||||||||||||||| |
|
|
| T |
37027592 |
tgcatcatggttgcgctcctcctattgttcatcgcgacatatcgagcaaaaatgttcttttagatttggattgtgaagcttacatctcagactttggaac |
37027691 |
T |
|
| Q |
402 |
a |
402 |
Q |
| |
|
| |
|
|
| T |
37027692 |
a |
37027692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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