View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9605_11 (Length: 315)
Name: NF9605_11
Description: NF9605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9605_11 |
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Alignment Details
Target: chr1 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 30 - 310
Target Start/End: Original strand, 14192354 - 14192634
Alignment:
| Q |
30 |
aatacatggacaggtttctgcgtcaagaaaaccagcagcatgaaccagaactattcatgacaatgttaagggcatgtaacgtagatattcccatatttga |
129 |
Q |
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| T |
14192354 |
aatacatgaacaggtttctgcttcaagaaaaccagcagaatgtaccaggaacattcgacacaaggttaagtgcatgtagcgaagatattcccatatttga |
14192453 |
T |
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| Q |
130 |
aatagacacccgcgcaagctatgatgctagcatcttaggttcagaattaactgcagatgttatcgggagaacaatgatattggatggttgttttctgtta |
229 |
Q |
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| T |
14192454 |
aatagacatccgcgcaagctatgatggtagcatcttaggttcagaattaactacagatgttatcgggagaaaaatgatattggatggttgttttctgtta |
14192553 |
T |
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| Q |
230 |
cagtttctcagtaaacttaatcagccagcaatagatgccgaagacccaatatttgaaaccagggaaaagatctgtgctgct |
310 |
Q |
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||| ||||||||| |||| | || ||| |||||||| || ||||||||||||||||||||||||||||||| ||||||||| |
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| T |
14192554 |
cagcttctcagtagacttgaacacccaacaatagatccccaagacccaatatttgaaaccagggaaaagatgtgtgctgct |
14192634 |
T |
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