View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9605_7 (Length: 359)
Name: NF9605_7
Description: NF9605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9605_7 |
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Alignment Details
Target: chr6 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 109 - 351
Target Start/End: Original strand, 33756982 - 33757224
Alignment:
| Q |
109 |
gccgtgaaagttagttatggcgacggagcaaccaccggtgacacttccggcatccgtagaaaatctaataaaccaagtatgcgtgaaacaatcacagcca |
208 |
Q |
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| T |
33756982 |
gccgtgaaagtttgttatggcgacggagcaaccaccggtgacacttccggcatccgtagaaaatctaataaaccaaatatgcgtgaaacaatcacaacca |
33757081 |
T |
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| Q |
209 |
ccactcgatccttcaacgatacgactcctcgcaacgatggcagaaaatcaagctcttcaaattctcaatgttatttccaatacaccaattcgaaccactt |
308 |
Q |
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| T |
33757082 |
ccactcgatccttcaacgatacgactcctcgcaacgatggcagaaaatcaagctcttcaaattctcaatgttatttccaatacaccaattcgaaccactt |
33757181 |
T |
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| Q |
309 |
ttaatgctttcactctcttcatgattaataaacattcttctca |
351 |
Q |
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| T |
33757182 |
ttaatgctttcactctcttcatgattaataaacattcttctca |
33757224 |
T |
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