View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9608_low_18 (Length: 241)

Name: NF9608_low_18
Description: NF9608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9608_low_18
NF9608_low_18
[»] chr8 (21 HSPs)
chr8 (1-223)||(5758850-5759072)
chr8 (55-223)||(20531766-20531931)
chr8 (87-223)||(14882219-14882355)
chr8 (89-223)||(14894587-14894721)
chr8 (22-223)||(11431071-11431270)
chr8 (107-223)||(13673629-13673745)
chr8 (107-223)||(21203567-21203683)
chr8 (107-223)||(21213983-21214099)
chr8 (128-223)||(32008313-32008408)
chr8 (107-223)||(21333416-21333532)
chr8 (41-210)||(23015435-23015603)
chr8 (70-223)||(31991898-31992040)
chr8 (142-223)||(33774650-33774731)
chr8 (142-223)||(9325769-9325850)
chr8 (169-223)||(25506948-25507002)
chr8 (166-223)||(20707620-20707677)
chr8 (70-132)||(31999699-31999762)
chr8 (70-115)||(14882146-14882191)
chr8 (70-115)||(14894496-14894541)
chr8 (70-115)||(13673809-13673854)
chr8 (70-115)||(33774590-33774635)
[»] chr3 (21 HSPs)
chr3 (1-220)||(20292605-20292824)
chr3 (75-223)||(13120425-13120573)
chr3 (75-223)||(13113296-13113444)
chr3 (87-223)||(2490058-2490194)
chr3 (107-223)||(18560391-18560507)
chr3 (70-223)||(51979211-51979364)
chr3 (107-223)||(5656370-5656486)
chr3 (107-223)||(9536375-9536491)
chr3 (107-223)||(9546797-9546913)
chr3 (107-223)||(19828762-19828878)
chr3 (78-223)||(24763007-24763153)
chr3 (142-223)||(4370478-4370559)
chr3 (142-223)||(4380224-4380305)
chr3 (142-223)||(20745586-20745667)
chr3 (142-223)||(4783534-4783615)
chr3 (148-216)||(12376060-12376128)
chr3 (70-115)||(4783430-4783475)
chr3 (75-115)||(2490018-2490058)
chr3 (91-139)||(4370550-4370598)
chr3 (91-139)||(4380296-4380344)
chr3 (75-115)||(18560543-18560583)
[»] chr5 (36 HSPs)
chr5 (3-223)||(42091108-42091328)
chr5 (75-223)||(20763807-20763955)
chr5 (55-223)||(31916259-31916424)
chr5 (75-223)||(27274841-27274989)
chr5 (55-223)||(4038623-4038788)
chr5 (91-223)||(21680986-21681119)
chr5 (91-223)||(22173977-22174110)
chr5 (99-223)||(18219909-18220033)
chr5 (107-223)||(37299523-37299639)
chr5 (107-223)||(37549313-37549429)
chr5 (107-223)||(37652111-37652227)
chr5 (107-223)||(13572404-13572520)
chr5 (107-223)||(30944538-30944654)
chr5 (107-223)||(30953960-30954076)
chr5 (41-223)||(206106-206287)
chr5 (107-223)||(8766189-8766305)
chr5 (107-223)||(33938546-33938662)
chr5 (107-223)||(33948946-33949062)
chr5 (70-223)||(20896398-20896552)
chr5 (70-223)||(20905188-20905343)
chr5 (75-223)||(19889014-19889150)
chr5 (142-223)||(18210602-18210683)
chr5 (147-223)||(21752514-21752590)
chr5 (147-223)||(21761937-21762013)
chr5 (70-206)||(34131146-34131270)
chr5 (129-223)||(18389545-18389639)
chr5 (142-223)||(18360545-18360626)
chr5 (169-223)||(37817026-37817080)
chr5 (148-222)||(23379100-23379174)
chr5 (135-223)||(31104881-31104969)
chr5 (107-154)||(37817082-37817129)
chr5 (75-116)||(18210455-18210496)
chr5 (75-116)||(18219793-18219834)
chr5 (75-116)||(22173893-22173934)
chr5 (70-115)||(30944441-30944486)
chr5 (70-115)||(30953863-30953908)
[»] chr6 (16 HSPs)
chr6 (1-222)||(791614-791836)
chr6 (75-223)||(1595903-1596051)
chr6 (86-220)||(24505876-24506010)
chr6 (55-223)||(16320757-16320922)
chr6 (22-223)||(30658548-30658748)
chr6 (89-223)||(12991027-12991161)
chr6 (89-223)||(26021655-26021789)
chr6 (75-223)||(26161364-26161513)
chr6 (50-223)||(17823558-17823730)
chr6 (107-223)||(16897147-16897263)
chr6 (107-223)||(16907800-16907916)
chr6 (70-223)||(16923035-16923190)
chr6 (184-223)||(18712754-18712793)
chr6 (70-115)||(12990952-12990997)
chr6 (70-115)||(26021564-26021609)
chr6 (148-223)||(27788080-27788155)
[»] scaffold0031 (1 HSPs)
scaffold0031 (70-223)||(112236-112389)
[»] chr4 (34 HSPs)
chr4 (86-223)||(12865806-12865943)
chr4 (9-223)||(53946686-53946898)
chr4 (70-223)||(16211629-16211783)
chr4 (55-210)||(16628993-16629145)
chr4 (91-223)||(3488388-3488521)
chr4 (75-223)||(7847216-7847365)
chr4 (91-221)||(3497655-3497786)
chr4 (107-223)||(17829052-17829168)
chr4 (107-223)||(17838443-17838559)
chr4 (107-223)||(3606518-3606634)
chr4 (107-223)||(6691456-6691572)
chr4 (107-223)||(6701862-6701978)
chr4 (107-223)||(16248525-16248641)
chr4 (142-223)||(5293948-5294029)
chr4 (142-223)||(5303562-5303643)
chr4 (142-223)||(21845434-21845515)
chr4 (142-223)||(21854863-21854944)
chr4 (142-223)||(21901297-21901378)
chr4 (142-223)||(21910726-21910807)
chr4 (142-223)||(27681610-27681691)
chr4 (142-223)||(27691221-27691302)
chr4 (92-223)||(16472117-16472249)
chr4 (144-223)||(2829019-2829098)
chr4 (165-223)||(44888214-44888272)
chr4 (148-223)||(11476561-11476636)
chr4 (22-140)||(44888285-44888401)
chr4 (140-223)||(6406334-6406417)
chr4 (70-115)||(17828955-17829000)
chr4 (70-115)||(17838346-17838391)
chr4 (41-114)||(2829116-2829187)
chr4 (91-139)||(21845506-21845554)
chr4 (91-139)||(21854935-21854983)
chr4 (91-139)||(21901369-21901417)
chr4 (91-139)||(21910798-21910846)
[»] chr1 (22 HSPs)
chr1 (70-223)||(20328827-20328980)
chr1 (37-223)||(21821865-21822048)
chr1 (92-223)||(49332803-49332934)
chr1 (75-223)||(21782168-21782317)
chr1 (90-223)||(20308281-20308414)
chr1 (90-223)||(20311760-20311893)
chr1 (1-223)||(18097326-18097534)
chr1 (142-223)||(26193959-26194040)
chr1 (70-223)||(27065547-27065689)
chr1 (70-205)||(20318503-20318626)
chr1 (153-223)||(12418310-12418380)
chr1 (166-223)||(25867726-25867783)
chr1 (166-223)||(22960352-22960409)
chr1 (107-161)||(25867775-25867829)
chr1 (165-223)||(37011484-37011542)
chr1 (70-134)||(12418375-12418440)
chr1 (129-224)||(18062718-18062813)
chr1 (75-140)||(26193904-26193969)
chr1 (22-146)||(37011536-37011658)
chr1 (92-161)||(22960401-22960470)
chr1 (148-223)||(1186931-1187006)
chr1 (75-115)||(20308433-20308473)
[»] scaffold0809 (1 HSPs)
scaffold0809 (37-223)||(98-279)
[»] scaffold0058 (4 HSPs)
scaffold0058 (75-223)||(57624-57772)
scaffold0058 (107-223)||(58774-58890)
scaffold0058 (86-223)||(24275-24399)
scaffold0058 (165-223)||(67075-67133)
[»] chr2 (18 HSPs)
chr2 (75-223)||(22688132-22688280)
chr2 (70-221)||(573709-573860)
chr2 (75-223)||(12570032-12570181)
chr2 (99-223)||(32937883-32938008)
chr2 (107-223)||(9503477-9503593)
chr2 (107-223)||(9514843-9514959)
chr2 (107-223)||(18650490-18650606)
chr2 (107-223)||(18662560-18662676)
chr2 (142-223)||(5337893-5337974)
chr2 (142-223)||(5347789-5347870)
chr2 (70-223)||(45190296-45190437)
chr2 (129-223)||(18660819-18660913)
chr2 (142-223)||(4456295-4456376)
chr2 (142-223)||(4457359-4457440)
chr2 (142-223)||(4466984-4467065)
chr2 (75-223)||(16934751-16934886)
chr2 (75-223)||(17005411-17005546)
chr2 (41-223)||(3606351-3606519)
[»] scaffold1411 (1 HSPs)
scaffold1411 (75-223)||(86-234)
[»] scaffold0553 (1 HSPs)
scaffold0553 (70-210)||(1311-1451)
[»] scaffold0303 (1 HSPs)
scaffold0303 (75-223)||(12334-12482)
[»] chr7 (25 HSPs)
chr7 (75-223)||(27987962-27988110)
chr7 (70-220)||(19585226-19585376)
chr7 (87-210)||(19799166-19799289)
chr7 (107-223)||(6544105-6544221)
chr7 (78-216)||(10415083-10415223)
chr7 (107-223)||(44896645-44896761)
chr7 (107-223)||(44906996-44907112)
chr7 (107-220)||(5926158-5926271)
chr7 (107-220)||(6533809-6533922)
chr7 (142-223)||(43982574-43982655)
chr7 (142-223)||(8500205-8500286)
chr7 (142-223)||(8510675-8510756)
chr7 (142-223)||(24541402-24541483)
chr7 (89-174)||(45552649-45552734)
chr7 (129-223)||(5382484-5382578)
chr7 (129-223)||(5392138-5392232)
chr7 (129-223)||(26348865-26348959)
chr7 (129-223)||(26363885-26363979)
chr7 (129-223)||(11627134-11627228)
chr7 (149-223)||(12769589-12769663)
chr7 (70-115)||(19799289-19799334)
chr7 (70-115)||(24541282-24541327)
chr7 (129-223)||(9006374-9006468)
chr7 (70-115)||(45552752-45552797)
chr7 (91-139)||(43982646-43982694)
[»] scaffold0014 (5 HSPs)
scaffold0014 (75-223)||(114972-115121)
scaffold0014 (107-223)||(234889-235005)
scaffold0014 (86-223)||(153985-154114)
scaffold0014 (166-223)||(146175-146231)
scaffold0014 (75-139)||(146233-146297)
[»] scaffold0141 (1 HSPs)
scaffold0141 (75-223)||(18208-18356)
[»] scaffold0265 (1 HSPs)
scaffold0265 (37-223)||(10761-10944)
[»] scaffold0068 (1 HSPs)
scaffold0068 (91-223)||(33332-33465)
[»] scaffold1468 (1 HSPs)
scaffold1468 (92-223)||(784-915)
[»] scaffold0254 (1 HSPs)
scaffold0254 (107-223)||(8557-8673)
[»] scaffold0590 (3 HSPs)
scaffold0590 (142-223)||(9744-9825)
scaffold0590 (75-115)||(9912-9952)
scaffold0590 (89-139)||(9816-9866)
[»] scaffold1705 (2 HSPs)
scaffold1705 (142-223)||(110-191)
scaffold1705 (87-138)||(183-234)
[»] scaffold0122 (1 HSPs)
scaffold0122 (55-223)||(22834-22987)
[»] scaffold0016 (1 HSPs)
scaffold0016 (148-222)||(13291-13365)
[»] scaffold0018 (2 HSPs)
scaffold0018 (169-223)||(54094-54148)
scaffold0018 (169-223)||(58046-58100)


Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 5759072 - 5758850
Alignment:
Q  1 tgattgacccatgcaaagatgctttcctgaacgtacattcatgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggttgcttatg 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  5759072 tgattgacccatgcaaagatgctttcctggacgtacattcatgtcacaatgtagcttgcatgttcttgttcatgttcttgataattctgggttgcttatg 5758973  T
Q  101 aacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgt 200  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5758972 aacaaccttctgaactcttatcataacgttctgatcaactctctgatcaacattctgaactaactttctgaacttcagaattggttcatggattcaatgt 5758873  T
Q  201 cctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||||    
T  5758872 cctttgatttcatgtatcttggt 5758850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 55 - 223
Target Start/End: Original strand, 20531766 - 20531931
Alignment:
Q  55 cttgcatgttcttggtcatattcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacatt 154  Q
    |||||||||||||   ||| |||||||| | ||| ||||||||||||||||||||||||||  | |||| |||||||||||||||| |||||||||||||    
T  20531766 cttgcatgttctt---catgttcttgatgaatctaggttgcttatgaacaaccttctgaactatcatcagaacgttctgatcaactctctgatcaacatt 20531862  T
Q  155 ctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  20531863 ctgaactaactttctgaacttcagaattagttcatggattcaatgtcctttgatttcatgcatcttggt 20531931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 14882219 - 14882355
Alignment:
Q  87 ctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggtt 186  Q
    ||||||||||| ||||| ||||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||| || |||    
T  14882219 ctgggttgcttctgaacgaccttctgaactctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaacttcagagttagtt 14882318  T
Q  187 catggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  14882319 catggattcaatgtcctttgattttatgcatcttggt 14882355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 89 - 223
Target Start/End: Original strand, 14894587 - 14894721
Alignment:
Q  89 gggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttca 188  Q
    ||||||||| ||||| ||||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||| || |||||    
T  14894587 gggttgcttctgaacgaccttctgaactctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaacttcagagttagttca 14894686  T
Q  189 tggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||| ||| ||||||||    
T  14894687 tggattcaatgtcctttgattttatgcatcttggt 14894721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 223
Target Start/End: Original strand, 11431071 - 11431270
Alignment:
Q  22 ctttcctgaacgtacattcatgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggtt-gcttatgaacaaccttctgaacactta 120  Q
    |||||||| || || ||| |||||||  ||||| ||||||||||||   ||| |||||||| |||||| ||| |||||||||||||||| ||||   | |    
T  11431071 ctttcctggacatatatttatgtcacgttgtagtttgcatgttctt---catgttcttgatgattctgagtttgcttatgaacaaccttatgaattatca 11431167  T
Q  121 tcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatctt 220  Q
    ||| |||||||||||||||| | | |||||||||||||||||| ||||||||||| |||||| ||||||||| |||||||||||||||||| ||||||||    
T  11431168 tcagaacgttctgatcaactctttaatcaacattctgaactaactttctgaactttagaattagttcatggactcaatgtcctttgatttcttgtatctt 11431267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 13673745 - 13673629
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||    
T  13673745 cttctgaactctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttttgaacttcagaattagttcatggattcaatgtcctttg 13673646  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  13673645 attttatgcatcttggt 13673629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 21203567 - 21203683
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  21203567 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 21203666  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  21203667 attttatgcatcttggt 21203683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 21213983 - 21214099
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  21213983 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 21214082  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  21214083 attttatgcatcttggt 21214099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 32008313 - 32008408
Alignment:
Q  128 gttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  32008313 gttctgatcaactttctgatcaacattctgaactaactttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 32008408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 21333532 - 21333416
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| ||| |||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  21333532 cttctgagctctcatcagaacgttctgatcaactttctaatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 21333433  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  21333432 attttatgcatcttggt 21333416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 210
Target Start/End: Original strand, 23015435 - 23015603
Alignment:
Q  41 atgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggtt-gcttatgaacaaccttctgaacacttatcataacgttctgatcaac 139  Q
    |||||||  ||||| ||||||||||||   ||| |||||||| ||| |||||| ||||||||||||| || ||||   | |||| |||||||||||||||    
T  23015435 atgtcacgttgtagtttgcatgttctt---catgttcttgatgattatgggtttgcttatgaacaactttatgaattatcatcagaacgttctgatcaac 23015531  T
Q  140 tat-ctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgattt 210  Q
    |   ||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||    
T  23015532 ttcactgatcaacattctgaactaactttttgaacttcagaattagttcatggattcaatgtcctttgattt 23015603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 223
Target Start/End: Original strand, 31991898 - 31992040
Alignment:
Q  70 tcatattcttgat-aattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttc 168  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||  | |||| |||||||||            |||||||||||||||||| ||||    
T  31991898 tcatgttcttgatgaattctgggttgcttatgaacaaccttctgaactatcatcagaacgttctg------------atcaacattctgaactaactttc 31991985  T
Q  169 tgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  31991986 tgaactttagaattagttcatggattcaatgtcctttgattttatgcatcttggt 31992040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 33774650 - 33774731
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  33774650 tctgatcaacattctgaactaactttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 33774731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 9325769 - 9325850
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  9325769 tctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttgattttatgcatcttggt 9325850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 25507002 - 25506948
Alignment:
Q  169 tgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  25507002 tgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 25506948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 20707677 - 20707620
Alignment:
Q  166 ttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||| |||||||||||    
T  20707677 ttctgaactttagaattagttcatgaattcaatgtcctttgatttcttgtatcttggt 20707620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 31999699 - 31999762
Alignment:
Q  70 tcatattcttgat-aattctgggttgcttatgaacaaccttctgaacacttatcataacgttct 132  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||  | |||| ||||||||    
T  31999699 tcatgttcttgatgaattctgggttgcttatgaacaaccttctgaactatcatcagaacgttct 31999762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 14882146 - 14882191
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||| |||||||||| |||||||||||| |||||||||||||||||    
T  14882146 tcatgttcttgataaatctgggttgcttctgaacaaccttctgaac 14882191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 14894496 - 14894541
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||| |||||||||| |||||||||||| |||||||||||||||||    
T  14894496 tcatgttcttgataaatctgggttgcttctgaacaaccttctgaac 14894541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 115
Target Start/End: Complemental strand, 13673854 - 13673809
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||| |||||||||| |||| ||||||| |||||||||||||||||    
T  13673854 tcatgttcttgataaatctgagttgcttctgaacaaccttctgaac 13673809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 33774590 - 33774635
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||| |||||||| | |||||||||||||||||||||||| |||||    
T  33774590 tcatgttcttgatgaatctgggttgcttatgaacaaccttttgaac 33774635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 164; Significance: 9e-88; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 20292824 - 20292605
Alignment:
Q  1 tgattgacccatgcaaagatgctttcctgaacgtacattcatgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggttgcttatg 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| || |||||||| ||||||||||||| |||    
T  20292824 tgattgacccatgcaaagatgctttcctggacgtacattcatgttccaatgtagcttgcatgttcttggttatgttcttgatgattctgggttgctaatg 20292725  T
Q  101 aacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgt 200  Q
    ||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  20292724 aacaaccttctgaactcttatcaaaacgttctgatcaactctctgatcaacattctgaactaactttttgaacttcagaattagttcatggattcaatgt 20292625  T
Q  201 cctttgatttcatgtatctt 220  Q
    |||||||||||||| |||||    
T  20292624 cctttgatttcatgcatctt 20292605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 13120425 - 13120573
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaact 174  Q
    |||||||| | ||||||||||||||||||||||||||||||  | |||| |||||||||||| ||| |||||||||||||||||||||| ||||||||||    
T  13120425 ttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttctgatcgactctctgatcaacattctgaactaactttctgaact 13120524  T
Q  175 tcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  13120525 tcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 13120573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 13113296 - 13113444
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaact 174  Q
    |||||||| | ||||||||||||||||||||||||||||||  | |||| |||||||||||| ||| ||||||||||||||| |||||| ||||||||||    
T  13113296 ttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttctgatcgactctctgatcaacattcttaactaactttctgaact 13113395  T
Q  175 tcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  13113396 tcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 13113444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 2490058 - 2490194
Alignment:
Q  87 ctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggtt 186  Q
    |||| |||||| ||||| ||||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||    
T  2490058 ctggattgcttctgaacgaccttctgaactctcatcagaacgttctgatcaactctctgatcaacattctgaactaactttctgaacttcagaattagtt 2490157  T
Q  187 catggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  2490158 catggattcaatgtcctttgattttatgcatcttggt 2490194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 18560507 - 18560391
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    |||||||||  | |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  18560507 cttctgaactatcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaacttcagaattagttcatggattcaatgtcctttg 18560408  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  18560407 attttatgcatcttggt 18560391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 70 - 223
Target Start/End: Original strand, 51979211 - 51979364
Alignment:
Q  70 tcatattcttgataattctggg-ttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttc 168  Q
    |||| |||||||| ||||| || |||||||||||||||||||||||   | |||| |||||||||| ||||| | ||||||||||||||| |||| ||||    
T  51979211 tcatgttcttgatgattctaggcttgcttatgaacaaccttctgaattatcatcagaacgttctgaccaactctttgatcaacattctgatctaactttc 51979310  T
Q  169 tgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||| |||||||||||||||||||||||| ||| |||||||||||    
T  51979311 tgaacttcagaattagttcatggattcaatgtcctttga-ttcttgtatcttggt 51979364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 5656370 - 5656486
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  5656370 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 5656469  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  5656470 attttatgcatcttggt 5656486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 9536491 - 9536375
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  9536491 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 9536392  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  9536391 attttatgcatcttggt 9536375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 9546913 - 9546797
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  9546913 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 9546814  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  9546813 attttatgcatcttggt 9546797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 19828762 - 19828878
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||||| || |||| |||||| ||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  19828762 cttctgaactctcatcagaacgttttgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 19828861  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  19828862 attttatgcatcttggt 19828878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 78 - 223
Target Start/End: Complemental strand, 24763153 - 24763007
Alignment:
Q  78 ttgataattctgggtt-gcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttc 176  Q
    ||||| |||||||||| |||||||||||| ||| ||||  || |||| ||||||||||||||||  |||| ||||||||||||| || ||||||||||||    
T  24763153 ttgatgattctgggtttgcttatgaacaatcttatgaaatctcatcagaacgttctgatcaactcactgaccaacattctgaacgaactttctgaacttc 24763054  T
Q  177 agaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    | |||| ||||||| ||||||||||||||||||||||| ||||||||    
T  24763053 aaaattagttcatgaattcaatgtcctttgatttcatgcatcttggt 24763007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 4370559 - 4370478
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||| ||||||||    
T  4370559 tctgatcaacattctgaactaattttctgaacttcagaattagttcatggattcaaagtcctttgattttatgcatcttggt 4370478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 4380305 - 4380224
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||| ||||||||    
T  4380305 tctgatcaacattctgaactaattttctgaacttcagaattagttcatggattcaaagtcctttgattttatgcatcttggt 4380224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 20745586 - 20745667
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  20745586 tctgatcaacattctgaactaactttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 20745667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 4783534 - 4783615
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||| ||| ||||||||    
T  4783534 tctgatcaacattctgaactaactttctgaacttcagagttagttcatggattcaatgtcctttgattttatgcatcttggt 4783615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 12376128 - 12376060
Alignment:
Q  148 caacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgta 216  Q
    |||| ||||||||||| |||||||||||||||||| ||||| | |||||||||||| ||||||| ||||    
T  12376128 caaccttctgaactaactttctgaacttcagaattagttcacgaattcaatgtcctatgatttcgtgta 12376060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 4783430 - 4783475
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||| |||||||||| |||||||||||| |||||||||||||||||    
T  4783430 tcatgttcttgataaatctgggttgcttctgaacaaccttctgaac 4783475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 2490018 - 2490058
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||||||| | |||||||||||| |||||||||||||||||    
T  2490018 ttcttgatgaatctgggttgcttctgaacaaccttctgaac 2490058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 4370598 - 4370550
Alignment:
Q  91 gttgcttatgaacaaccttctgaacacttatcataacgttctgatcaac 139  Q
    ||||||| ||||||||||||||| | || |||| |||||||||||||||    
T  4370598 gttgcttctgaacaaccttctgagctctcatcagaacgttctgatcaac 4370550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 4380344 - 4380296
Alignment:
Q  91 gttgcttatgaacaaccttctgaacacttatcataacgttctgatcaac 139  Q
    ||||||| ||||||||||||||| | || |||| |||||||||||||||    
T  4380344 gttgcttctgaacaaccttctgagctctcatcagaacgttctgatcaac 4380296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 18560583 - 18560543
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||||||||| ||||||| |||| |||||||||||||||||    
T  18560583 ttcttgataaatctgggtagcttctgaacaaccttctgaac 18560543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 157; Significance: 1e-83; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 3 - 223
Target Start/End: Original strand, 42091108 - 42091328
Alignment:
Q  3 attgacccatgcaaagatgctttcctgaacgtacattcatgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggttgcttatgaa 102  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||| || |||||| | |||||||||||||||||||    
T  42091108 attgacccatgcaaagatgctttcctggacgtacattcatgtcccaatgtaacttgcatgttcttggttatgttcttggtgattctgggttgcttatgaa 42091207  T
Q  103 caaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcc 202  Q
    ||||||||||||| || |||| |||||| ||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  42091208 caaccttctgaactctcatcagaacgttttgatcaactctctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcc 42091307  T
Q  203 tttgatttcatgtatcttggt 223  Q
    |||||||||||| ||||||||    
T  42091308 tttgatttcatgcatcttggt 42091328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 75 - 223
Target Start/End: Complemental strand, 20763955 - 20763807
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaact 174  Q
    |||||||| | |||||||||||||||||||||||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  20763955 ttcttgatgaatctgggttgcttatgaacaaccttctgaactctcatcagaacgttctgatcaactctctgatcaacattctgaactaactttctgaact 20763856  T
Q  175 tcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  20763855 tcagaattagttcatggattcaatgtcctttgatttcatgcatcttggt 20763807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 55 - 223
Target Start/End: Complemental strand, 31916424 - 31916259
Alignment:
Q  55 cttgcatgttcttggtcatattcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacatt 154  Q
    |||||||||||||   ||| |||||||| | ||||||||||||||||||||||||||||||  | |||| |||||||||||||||| |||||||||||||    
T  31916424 cttgcatgttctt---catgttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttctgatcaactctctgatcaacatt 31916328  T
Q  155 ctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  31916327 ctgaactaactttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 31916259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 27274841 - 27274989
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaact 174  Q
    |||||||| | ||||||||||||||||||||||||||||||  | |||| ||||||||||| ||||  ||||||||||||||||||||| ||||||||||    
T  27274841 ttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttctgattaacttcctgatcaacattctgaactaactttctgaact 27274940  T
Q  175 tcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  27274941 tcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 27274989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 55 - 223
Target Start/End: Original strand, 4038623 - 4038788
Alignment:
Q  55 cttgcatgttcttggtcatattcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacatt 154  Q
    |||||||||||||   ||| || ||||| | ||||||||||||||||||||| ||||||||  | |||| |||||||||||||||| |||||||||||||    
T  4038623 cttgcatgttctt---catgtttttgatgaatctgggttgcttatgaacaactttctgaactatcatcagaacgttctgatcaactctctgatcaacatt 4038719  T
Q  155 ctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||  ||| ||||||||    
T  4038720 ctgaactaactttctgaacttcagaattagttcatggattcaatgtcctttgattatatgcatcttggt 4038788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 21681119 - 21680986
Alignment:
Q  91 gttgcttatgaacaaccttctgaacacttatcataacgttctgatcaa-ctatctgatcaacattctgaactaattttctgaacttcagaattggttcat 189  Q
    ||||||| ||||||||||||||| | || |||| |||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| ||||||    
T  21681119 gttgcttctgaacaaccttctgagctctcatcagaacgttctgatcaaactctctgatcaacattctgaactaactttctgaacttcagaattagttcat 21681020  T
Q  190 ggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||| ||| ||||||||    
T  21681019 ggattcaatgtcctttgattttatgcatcttggt 21680986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 22173977 - 22174110
Alignment:
Q  91 gttgcttatgaacaaccttctgaacacttatcataacgttctgatcaa-ctatctgatcaacattctgaactaattttctgaacttcagaattggttcat 189  Q
    ||||||| ||||||||||||||| | || |||| |||||||||||||| || |||||||||||||||||||||| ||||||||||||||| || ||||||    
T  22173977 gttgcttctgaacaaccttctgagctctcatcagaacgttctgatcaaactctctgatcaacattctgaactaactttctgaacttcagagttagttcat 22174076  T
Q  190 ggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||| ||||||||||||    
T  22174077 ggattcaatgtcctttgattttatgtatcttggt 22174110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 18219909 - 18220033
Alignment:
Q  99 tgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaat 198  Q
    ||||||||||||||| | || |||| |||||||||||||||  |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  18219909 tgaacaaccttctgagctctcatcagaacgttctgatcaacgttctgatcaacattctgaactaactttctgaacttcagaattagttcatggattcaat 18220008  T
Q  199 gtcctttgatttcatgtatcttggt 223  Q
    |||||||||||| ||| ||||||||    
T  18220009 gtcctttgattttatgcatcttggt 18220033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 37299523 - 37299639
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  37299523 cttctgaactctcatcagaacgttctgatcaactctctgatcaacattctgaactaactttctgaacttcagaattagttcatggattcaatgtcctttg 37299622  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  37299623 attttatgcatcttggt 37299639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 37549313 - 37549429
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  37549313 cttctgaactctcatcagaacgttctgatcaactctctgatcaacattctgaactaactttctgaacttcagaattagttcatggattcaatgtcctttg 37549412  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  37549413 attttatgcatcttggt 37549429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 37652111 - 37652227
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  37652111 cttctgaactctcatcagaacgttctgatcaactctctgatcaacattctgaactaactttctgaacttcagaattagttcatggattcaatgtcctttg 37652210  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  37652211 attttatgcatcttggt 37652227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 13572404 - 13572520
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||    
T  13572404 cttctgaactctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaacttcataattagttcatggattcaatgtcctttg 13572503  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  13572504 attttatgcatcttggt 13572520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 30944538 - 30944654
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||    
T  30944538 cttctgaactctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttttgaacttcagaattagttcatggattcaatgtcctttg 30944637  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  30944638 attttatgcatcttggt 30944654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 30953960 - 30954076
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||    
T  30953960 cttctgaactctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttttgaacttcagaattagttcatggattcaatgtcctttg 30954059  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  30954060 attttatgcatcttggt 30954076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 41 - 223
Target Start/End: Original strand, 206106 - 206287
Alignment:
Q  41 atgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggtt-gcttatgaacaaccttctgaacacttatcataacgttctgatcaac 139  Q
    |||||||  ||||| ||||||||||||   ||| |||||||| |||||||||| | |||||||||||||||||||   | |||| |||||||||||||||    
T  206106 atgtcacgttgtagtttgcatgttctt---catgttcttgatgattctgggtttgtttatgaacaaccttctgaattatcatcagaacgttctgatcaac 206202  T
Q  140 tatc--tgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    | ||  || ||||| || |||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  206203 t-tcattggtcaactttttgaactaactttttgaacttcagaattagttcatggattcaatgtcctttgatttcatgtatcttggt 206287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 8766189 - 8766305
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  8766189 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 8766288  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  8766289 attttatgcatcttggt 8766305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 33938662 - 33938546
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  33938662 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 33938563  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  33938562 attttatgcatcttggt 33938546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 33949062 - 33948946
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  33949062 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 33948963  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  33948962 attttatgcatcttggt 33948946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 70 - 223
Target Start/End: Complemental strand, 20896552 - 20896398
Alignment:
Q  70 tcatattcttgataattctgggttg-cttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttc 168  Q
    |||| |||||||| ||||||||||  ||||||||||||||| |||||  | |||| ||||||||||| ||||  ||||||||||||||||||||| |||     
T  20896552 tcatgttcttgatgattctgggtttacttatgaacaaccttatgaactttcatcagaacgttctgataaactcactgatcaacattctgaactaactttt 20896453  T
Q  169 tgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||| ||||||| |||||| ||||||||||||| | |||||||||    
T  20896452 tgaacttcagaattagttcatgaattcaacgtcctttgatttcttctatcttggt 20896398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 70 - 223
Target Start/End: Original strand, 20905188 - 20905343
Alignment:
Q  70 tcatattcttgataattctgggtt-gcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaa-tttt 167  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||||  | |||| ||||||||||||||||  ||||| |||||||| |||||| | ||    
T  20905188 tcatgttcttgatgattctgggtttgcttatgaacaaccttctgaactttcatcaaaacgttctgatcaactcactgataaacattctaaactaactgtt 20905287  T
Q  168 ctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
     ||| |||||||||| ||||||| ||||| |||||||||||||| |||||||||||    
T  20905288 atgaccttcagaattagttcatgaattcattgtcctttgatttcttgtatcttggt 20905343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 19889014 - 19889150
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaact 174  Q
    |||||||| | ||||||||||||||||||||||||||||||  | |||| |||||||||            |||||||||||||||||| ||||||||||    
T  19889014 ttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttctg------------atcaacattctgaactaactttctgaact 19889101  T
Q  175 tcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  19889102 tcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 19889150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 18210602 - 18210683
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  18210602 tctgatcaacattctgaactaactttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 18210683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 21752590 - 21752514
Alignment:
Q  147 tcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  21752590 tcaacattctgaactaattttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 21752514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 21762013 - 21761937
Alignment:
Q  147 tcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  21762013 tcaacattctgaactaattttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 21761937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 206
Target Start/End: Original strand, 34131146 - 34131270
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttct 169  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | |||| |||||||||            |||||||||||||||||| |||||    
T  34131146 tcatgttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttctg------------atcaacattctgaactaactttct 34131233  T
Q  170 gaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||||||||| |||||||||||||||||||||||    
T  34131234 gaacttcagaattagttcatggattcaatgtcctttg 34131270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 18389639 - 18389545
Alignment:
Q  129 ttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||| ||||  ||||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  18389639 ttctgaacaaccttctgagcaacattctgatctaactttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 18389545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 18360626 - 18360545
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  18360626 tctgagcaacattctgatctaactttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 18360545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 37817080 - 37817026
Alignment:
Q  169 tgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  37817080 tgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 37817026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 23379100 - 23379174
Alignment:
Q  148 caacattctgaactaattttctgaacttcagaattggttcatggattcaa-tgtcctttgatttcatgtatcttgg 222  Q
    ||||||||| |||||| |||||||||| |||| || ||||||| |||||| |||||||||||||| ||||||||||    
T  23379100 caacattctaaactaactttctgaact-cagagttagttcatgaattcaaatgtcctttgatttcttgtatcttgg 23379174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 31104969 - 31104881
Alignment:
Q  135 tcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatgga-ttcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||| ||||| |||||||||||||||| ||||||||| ||||| || ||||||| | || |||||| ||||||||| |||||| ||||    
T  31104969 tcaactttctgagcaacattctgaactaactttctgaac-tcagagttagttcatgaatttaaatgtcatttgatttcttgtatcatggt 31104881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 37817129 - 37817082
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacatt 154  Q
    ||||||||| || |||| |||||||||||||||| |||||||||||||    
T  37817129 cttctgaactctcatcagaacgttctgatcaactttctgatcaacatt 37817082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 18210455 - 18210496
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaaca 116  Q
    |||||||| | |||||||||||| ||||||||||||||||||    
T  18210455 ttcttgatgaatctgggttgcttctgaacaaccttctgaaca 18210496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 18219793 - 18219834
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaaca 116  Q
    |||||||| | |||||||||||| ||||||||||||||||||    
T  18219793 ttcttgatgaatctgggttgcttctgaacaaccttctgaaca 18219834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 22173893 - 22173934
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaaca 116  Q
    |||||||| | |||||||||||| ||||||||||||||||||    
T  22173893 ttcttgatgaatctgggttgcttctgaacaaccttctgaaca 22173934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 30944441 - 30944486
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||| |||||||||| |||| ||||||| |||||||||||||||||    
T  30944441 tcatgttcttgataaatctgagttgcttctgaacaaccttctgaac 30944486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 30953863 - 30953908
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||| |||||||||| |||| ||||||| |||||||||||||||||    
T  30953863 tcatgttcttgataaatctgagttgcttctgaacaaccttctgaac 30953908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 5e-80; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 791614 - 791836
Alignment:
Q  1 tgattgacccatgcaaagatgctttcctgaacgtacattcatgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggtt-gcttat 99  Q
    |||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||| |||||||| |||||||||| ||||||    
T  791614 tgattgacccatgcaatgatgctttcctggacgtacattcatgtcccaatgtagcttgcatcttcttggtcatgttcttgatgattctgggtttgcttat 791713  T
Q  100 gaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatg 199  Q
    ||||||||||||||||  | |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||     
T  791714 gaacaaccttctgaactatcatcagaacgttctgatcaactctctgatcaacattctgaactaactttctgaacttcagaattagttcatggattcaata 791813  T
Q  200 tcctttgatttcatgtatcttgg 222  Q
    || ||||||||| ||||||||||    
T  791814 tcttttgatttcttgtatcttgg 791836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 75 - 223
Target Start/End: Complemental strand, 1596051 - 1595903
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaact 174  Q
    |||||||| | ||||||||||||||||||||||||||||||  | |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  1596051 ttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttctgatcaactctctgatcaacattctgaactaactttctgaact 1595952  T
Q  175 tcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  1595951 tcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 1595903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 24505876 - 24506010
Alignment:
Q  86 tctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggt 185  Q
    ||||||||||||||||||||||||| ||||  | |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  24505876 tctgggttgcttatgaacaaccttcggaactatcatcagaacgttctgatcaactctctgatcaacattctgaactaactttctgaacttcagaattggt 24505975  T
Q  186 tcatggattcaatgtcctttgatttcatgtatctt 220  Q
    ||||||||||||||||||||||||| |||||||||    
T  24505976 tcatggattcaatgtcctttgattttatgtatctt 24506010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 55 - 223
Target Start/End: Complemental strand, 16320922 - 16320757
Alignment:
Q  55 cttgcatgttcttggtcatattcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacatt 154  Q
    |||||||||||||   || ||||||||| | ||||||||||||||||||||||||||||||  | |||| |||||||||||||||| |||||||||||||    
T  16320922 cttgcatgttctt---cacattcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttctgatcaactctctgatcaacatt 16320826  T
Q  155 ctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  16320825 ctgaaatacctttctgaacttcagaattagttcatggattcaatgtcctttgatttaatgcatcttggt 16320757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 223
Target Start/End: Original strand, 30658548 - 30658748
Alignment:
Q  22 ctttcctgaacgtacattcatgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggtt-gcttatgaacaaccttctgaacactta 120  Q
    |||||||| || || ||| |||||||  ||||| ||||||||||||   ||| |||||||| |||||||||| |||||||||||||||||||||   | |    
T  30658548 ctttcctggacatatatttatgtcacgttgtagtttgcatgttctt---catgttcttgatgattctgggtttgcttatgaacaaccttctgaattatca 30658644  T
Q  121 tcataacgttctgatcaactat-ctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatct 219  Q
    ||| ||||||||||||||||   ||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30658645 tcagaacgttctgatcaacttcactgatcaactttctgaactaactttctgaacttcagaattagttcatggattcaatgtcctttgatttcatgtatct 30658744  T
Q  220 tggt 223  Q
    ||||    
T  30658745 tggt 30658748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 89 - 223
Target Start/End: Original strand, 12991027 - 12991161
Alignment:
Q  89 gggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttca 188  Q
    ||||||||| ||||| ||||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||| || |||||    
T  12991027 gggttgcttctgaacgaccttctgaactctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaacttcagagttagttca 12991126  T
Q  189 tggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||| ||| ||||||||    
T  12991127 tggattcaatgtcctttgattttatgcatcttggt 12991161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 89 - 223
Target Start/End: Original strand, 26021655 - 26021789
Alignment:
Q  89 gggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttca 188  Q
    ||||||||| ||||| ||||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||| || |||||    
T  26021655 gggttgcttctgaacgaccttctgaactctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaacttcagagttagttca 26021754  T
Q  189 tggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||| ||| ||||||||    
T  26021755 tggattcaatgtcctttgattttatgcatcttggt 26021789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 75 - 223
Target Start/End: Complemental strand, 26161513 - 26161364
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacactt-atcataacgttctgatcaactatctgatcaacattctgaactaattttctgaac 173  Q
    |||||||| | ||| ||||||||||| |||||||||||||| ||| |||| |||||||||||||||| |||||||||||||||||||||| |||||||||    
T  26161513 ttcttgatgaatctaggttgcttatggacaaccttctgaactcttcatcagaacgttctgatcaactctctgatcaacattctgaactaactttctgaac 26161414  T
Q  174 ttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||| ||    ||||||||||||||||||||||||| ||||||||    
T  26161413 ttcagaattagtatgaggattcaatgtcctttgatttcatgcatcttggt 26161364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 50 - 223
Target Start/End: Complemental strand, 17823730 - 17823558
Alignment:
Q  50 tgtagcttgcatgttcttggtcatattcttgataattctgggtt-gcttatgaacaaccttctgaacacttatcataacgttctgatcaactat-ctgat 147  Q
    ||||| ||||||||||||   ||| |||||||| ||| |||||| |||||||||||||||||||||   | |||| ||||||||||||||||   |||||    
T  17823730 tgtagtttgcatgttctt---catgttcttgatgattatgggtttgcttatgaacaaccttctgaattatcatcaaaacgttctgatcaacttcactgat 17823634  T
Q  148 caacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  17823633 caactttctaaactaactttctgaacttcagaattagttcatggattcaatgtcctttgatttcatgcatcttggt 17823558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 16897263 - 16897147
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  16897263 cttctgaactctgatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 16897164  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  16897163 attttatgcatcttggt 16897147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 16907916 - 16907800
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  16907916 cttctgaactctgatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 16907817  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  16907816 attttatgcatcttggt 16907800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 223
Target Start/End: Complemental strand, 16923190 - 16923035
Alignment:
Q  70 tcatattcttgataattctgggt-tgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatc--tgatcaacattctgaactaattt 166  Q
    |||| |||||||| ||| ||||| ||||||||||||||||| ||||   | |||| |||||||||||||||| ||  || ||||| ||||||||||| ||    
T  16923190 tcatgttcttgatgattttgggtgtgcttatgaacaaccttttgaattatcatcagaacgttctgatcaact-tcattggtcaactttctgaactaactt 16923092  T
Q  167 tctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  16923091 tctgaacttcagaattagttcatggatttaatgtcatttgatttcatgtatcttggt 16923035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 18712754 - 18712793
Alignment:
Q  184 gttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  18712754 gttcatggattcaatgtcctttgatttcatgcatcttggt 18712793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 12990952 - 12990997
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||| |||||||||| ||||||||| || |||||||||||||||||    
T  12990952 tcatgttcttgataaatctgggttgtttctgaacaaccttctgaac 12990997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 26021564 - 26021609
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||| |||||||||| |||| ||||||| |||||||||||||||||    
T  26021564 tcatgttcttgataaatctgagttgcttctgaacaaccttctgaac 26021609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 27788080 - 27788155
Alignment:
Q  148 caacattctgaactaattttctgaacttcagaattggttcatggattcaa-tgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||| |||| ||| |||||| |||| || | ||||| |||||| |||||||||||||| |||||||||||    
T  27788080 caacattctgatctaactttatgaact-cagagttagatcatgaattcaaatgtcctttgatttcttgtatcttggt 27788155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 70 - 223
Target Start/End: Original strand, 112236 - 112389
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttct 169  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | |||| |||||||||||||||| |||||||||||||||||||||| |||||    
T  112236 tcatgttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttctgatcaactttctgatcaacattctgaactaactttct 112335  T
Q  170 gaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  112336 gaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 112389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 9e-51; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 86 - 223
Target Start/End: Complemental strand, 12865943 - 12865806
Alignment:
Q  86 tctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggt 185  Q
    ||||||||||||||||||||||||||||||  | |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||    
T  12865943 tctgggttgcttatgaacaaccttctgaactatcatcagaacgttctgatcaactctctgatcaacattctgaactaactttctgaacttcagaattagt 12865844  T
Q  186 tcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  12865843 tcatggattcaatgtcctttgattttatgcatcttggt 12865806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 53946686 - 53946898
Alignment:
Q  9 ccatgcaaagatgctttcctgaacgtacattcatgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggtt-gcttatgaacaacc 107  Q
    |||||||||  | |||||||| || || ||| |||||||  ||||| ||||||||||||   ||| |||||||| ||| |||||| ||||||||||||||    
T  53946686 ccatgcaaatgtactttcctggacatatatttatgtcacgttgtagtttgcatgttctt---catgttcttgatgattttgggtttgcttatgaacaacc 53946782  T
Q  108 ttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttga 207  Q
    |||||||   | |||| |||||||||||||||| | |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||    
T  53946783 ttctgaattatcatcagaacgttctgatcaactctttgatcaacattctgaactaactttctgaacttcagaattagttcatggattcaatgtcttttga 53946882  T
Q  208 tttcatgtatcttggt 223  Q
    |||| |||||||||||    
T  53946883 tttcttgtatcttggt 53946898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 70 - 223
Target Start/End: Original strand, 16211629 - 16211783
Alignment:
Q  70 tcatattcttgataattctgggtt-gcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttc 168  Q
    |||| |||||||| |||||||||| |||||||||||||||||| |||  | ||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  16211629 tcatgttcttgatgattctgggtttgcttatgaacaaccttctaaactatcatcataacgttctgatcaactctctgatcaacattctgaactaactttc 16211728  T
Q  169 tgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||| |||| ||||||| ||| |||||||||||||||| |||||||||||    
T  16211729 tgaacttcataattagttcatgaatttaatgtcctttgatttcttgtatcttggt 16211783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 210
Target Start/End: Complemental strand, 16629145 - 16628993
Alignment:
Q  55 cttgcatgttcttggtcatattcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacatt 154  Q
    |||||||||||||   ||| |||||||| | ||||||||||||||||||||||||||||||  | |||| ||| |||||||||||| |||||||||| ||    
T  16629145 cttgcatgttctt---catgttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacattctgatcaactctctgatcaacctt 16629049  T
Q  155 ctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgattt 210  Q
    ||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||    
T  16629048 ctgaactaactttctgagcttcagaattagttcatggattcaatgtcctttgattt 16628993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 3488388 - 3488521
Alignment:
Q  91 gttgcttatgaacaaccttctgaacacttatcataacgttctgatcaa-ctatctgatcaacattctgaactaattttctgaacttcagaattggttcat 189  Q
    ||||||| ||||||||||||||| | || |||| |||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| ||||||    
T  3488388 gttgcttctgaacaaccttctgagctctcatcagaacgttctgatcaaactctctgatcaacattctgaactaactttctgaacttcagaattagttcat 3488487  T
Q  190 ggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||| ||| ||||||||    
T  3488488 ggattcaatgtcctttgattttatgcatcttggt 3488521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 7847216 - 7847365
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacactt-atcataacgttctgatcaactatctgatcaacattctgaactaattttctgaac 173  Q
    |||||||| | ||||||||||| ||||||||||||||||||  || |||| ||||||||||||||||  |||||||||||| |||||||| |||||||||    
T  7847216 ttcttgatgaatctgggttgctgatgaacaaccttctgaactattcatcagaacgttctgatcaactcactgatcaacattttgaactaactttctgaac 7847315  T
Q  174 ttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||| ||||||| ||||||||||||||||||| ||| ||||||||    
T  7847316 ttcagaattagttcatgaattcaatgtcctttgattttatgcatcttggt 7847365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 3497655 - 3497786
Alignment:
Q  91 gttgcttatgaacaaccttctgaacacttatcataacgttctgatcaa-ctatctgatcaacattctgaactaattttctgaacttcagaattggttcat 189  Q
    ||||||| ||||||||||||||| | || |||| |||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| ||||||    
T  3497655 gttgcttctgaacaaccttctgagctctcatcagaacgttctgatcaaactctctgatcaacattctgaactaactttctgaacttcagaattagttcat 3497754  T
Q  190 ggattcaatgtcctttgatttcatgtatcttg 221  Q
    ||||||||||||||||||||| ||| ||||||    
T  3497755 ggattcaatgtcctttgattttatgcatcttg 3497786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 17829052 - 17829168
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||    
T  17829052 cttctgaactctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttttgaacttcagaattagttcatggattcaatgtcctttg 17829151  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  17829152 attttatgcatcttggt 17829168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 17838443 - 17838559
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||    
T  17838443 cttctgaactctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttttgaacttcagaattagttcatggattcaatgtcctttg 17838542  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  17838543 attttatgcatcttggt 17838559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 3606518 - 3606634
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    |||||||||  | |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||    
T  3606518 cttctgaactatcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaacttcagagttagttcatggattcaatgtcctttg 3606617  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  3606618 attttatgcatcttggt 3606634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 6691572 - 6691456
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  6691572 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 6691473  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  6691472 attttatgcatcttggt 6691456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 6701978 - 6701862
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  6701978 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 6701879  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  6701878 attttatgcatcttggt 6701862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 16248641 - 16248525
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  16248641 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 16248542  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  16248541 attttatgcatcttggt 16248525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 5293948 - 5294029
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  5293948 tctgatcaacattctgaactaattttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 5294029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 5303562 - 5303643
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  5303562 tctgatcaacattctgaactaattttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 5303643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 21845515 - 21845434
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  21845515 tctgatcaacattctgaactaattttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 21845434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 21854944 - 21854863
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  21854944 tctgatcaacattctgaactaattttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 21854863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 21901378 - 21901297
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  21901378 tctgatcaacattctgaactaattttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 21901297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 21910807 - 21910726
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  21910807 tctgatcaacattctgaactaattttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 21910726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 27681610 - 27681691
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  27681610 tctgatcaacattctgaactaattttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 27681691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 27691221 - 27691302
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  27691221 tctgatcaacattctgaactaattttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 27691302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 223
Target Start/End: Complemental strand, 16472249 - 16472117
Alignment:
Q  92 ttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactat-ctgatcaacattctgaactaattttctgaacttcagaattggttcatg 190  Q
    |||||| ||||||||| |||||||  | |||| ||||||||||||||||   ||||||||| |||||||| || ||| |||||||||||||| |||||||    
T  16472249 ttgcttgtgaacaaccatctgaactatcatcagaacgttctgatcaacttcactgatcaactttctgaacaaactttatgaacttcagaattagttcatg 16472150  T
Q  191 gattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||| ||| |||||||    
T  16472149 gattcaatgtcctttgatttcttgtgtcttggt 16472117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 2829098 - 2829019
Alignment:
Q  144 tgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||| || |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2829098 tgatcaactttttgaactaactttctgaacttcagaattagttcatggattcaatgtcctttgatttcatgtatcttggt 2829019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 44888272 - 44888214
Alignment:
Q  165 tttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44888272 tttctgaacttcagaattagttcatggattcaatgtcctttgatttcatgtatcttggt 44888214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 11476636 - 11476561
Alignment:
Q  148 caacattctgaactaattttctgaacttcagaattggttcatggattcaa-tgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||| |||||||||| |||| || ||||||| |||||| |||||||||||||| |||||||||||    
T  11476636 caacattctgaactaactttctgaact-cagagttagttcatgaattcaaatgtcctttgatttcttgtatcttggt 11476561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 44888401 - 44888285
Alignment:
Q  22 ctttcctgaacgtacattcatgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggttg-cttatgaacaaccttctgaacactta 120  Q
    |||||||| || || ||| |||||||  ||||| ||||||||||||   ||| |||||||| ||||||||||  ||||||||||||||||||||   | |    
T  44888401 ctttcctggacatatatttatgtcacgttgtagtttgcatgttctt---catgttcttgatgattctgggttttcttatgaacaaccttctgaattatca 44888305  T
Q  121 tcataacgttctgatcaact 140  Q
    ||| ||||||||||||||||    
T  44888304 tcaaaacgttctgatcaact 44888285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 6406334 - 6406417
Alignment:
Q  140 tatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaa-tgtcctttgatttcatgtatcttggt 223  Q
    ||||||| |||||||||||||||| ||| |||||| || | || ||||||| |||||| |||||||||||||| |||||||||||    
T  6406334 tatctgagcaacattctgaactaactttttgaact-catagttagttcatgaattcaaatgtcctttgatttcttgtatcttggt 6406417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 17828955 - 17829000
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||| |||||||||| |||| ||||||| |||||||||||||||||    
T  17828955 tcatgttcttgataaatctgagttgcttctgaacaaccttctgaac 17829000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 17838346 - 17838391
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||| |||||||||| |||| ||||||| |||||||||||||||||    
T  17838346 tcatgttcttgataaatctgagttgcttctgaacaaccttctgaac 17838391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 2829187 - 2829116
Alignment:
Q  41 atgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggtt-gcttatgaacaaccttctgaa 114  Q
    |||||||  ||||| ||||||||||||   ||| |||||||| |||||||||| | |||||||||||||||||||    
T  2829187 atgtcacgttgtagtttgcatgttctt---catgttcttgatgattctgggtttggttatgaacaaccttctgaa 2829116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 21845554 - 21845506
Alignment:
Q  91 gttgcttatgaacaaccttctgaacacttatcataacgttctgatcaac 139  Q
    ||||||| ||||||||||||||| | || |||| |||||||||||||||    
T  21845554 gttgcttctgaacaaccttctgagctctcatcagaacgttctgatcaac 21845506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 21854983 - 21854935
Alignment:
Q  91 gttgcttatgaacaaccttctgaacacttatcataacgttctgatcaac 139  Q
    ||||||| ||||||||||||||| | || |||| |||||||||||||||    
T  21854983 gttgcttctgaacaaccttctgagctctcatcagaacgttctgatcaac 21854935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 21901417 - 21901369
Alignment:
Q  91 gttgcttatgaacaaccttctgaacacttatcataacgttctgatcaac 139  Q
    ||||||| ||||||||||||||| | || |||| |||||||||||||||    
T  21901417 gttgcttctgaacaaccttctgagctctcatcagaacgttctgatcaac 21901369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 21910846 - 21910798
Alignment:
Q  91 gttgcttatgaacaaccttctgaacacttatcataacgttctgatcaac 139  Q
    ||||||| ||||||||||||||| | || |||| |||||||||||||||    
T  21910846 gttgcttctgaacaaccttctgagctctcatcagaacgttctgatcaac 21910798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 9e-51; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 70 - 223
Target Start/End: Original strand, 20328827 - 20328980
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttct 169  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | |||| |||||| ||||||||| |||||||||||||||||||||| |||||    
T  20328827 tcatgttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttttgatcaactttctgatcaacattctgaactaactttct 20328926  T
Q  170 gaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  20328927 gaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 20328980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 37 - 223
Target Start/End: Original strand, 21821865 - 21822048
Alignment:
Q  37 attcatgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggtt-gcttatgaacaaccttctgaacacttatcataacgttctgat 135  Q
    |||||||||||| ||||  ||||||||||||   ||| |||||||| |||||||||| ||||||||||||||||||||||  | |||| |||||||||||    
T  21821865 attcatgtcaca-tgtacgttgcatgttctt---catgttcttgatgattctgggtttgcttatgaacaaccttctgaactttcatcaaaacgttctgat 21821960  T
Q  136 caactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||| |  ||||| ||||||||||||||||||| |||||||||||||| ||||||| ||||| |||||||||||||| |||||||||||    
T  21821961 caattcactgataaacattctgaactaattttatgaacttcagaattagttcatgaattcattgtcctttgatttcttgtatcttggt 21822048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 92 - 223
Target Start/End: Complemental strand, 49332934 - 49332803
Alignment:
Q  92 ttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatgg 191  Q
    |||||||||||||||||||||||   | |||| |||||||||||| ||| | |||||||||||||||||||| |||||||||||||||||| ||||||||    
T  49332934 ttgcttatgaacaaccttctgaattatcatcagaacgttctgatccactctttgatcaacattctgaactaactttctgaacttcagaattagttcatgg 49332835  T
Q  192 attcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||| || ||||||||    
T  49332834 attcaatgtcctttgatttcttgcatcttggt 49332803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 75 - 223
Target Start/End: Complemental strand, 21782317 - 21782168
Alignment:
Q  75 ttcttgataattctgggtt-gcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaac 173  Q
    |||||||| |||||||||| |||||||||||||||||| |||  | |||| |||||| |||||||||  ||||||||||||||||||||| |||||||||    
T  21782317 ttcttgatgattctgggtttgcttatgaacaaccttctaaactttcatcagaacgttttgatcaactcactgatcaacattctgaactaactttctgaac 21782218  T
Q  174 ttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||| |||| ||||||| |||||| ||||||||||||| | |||||||||    
T  21782217 ttcataattagttcatgaattcaacgtcctttgatttcttctatcttggt 21782168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 20308414 - 20308281
Alignment:
Q  90 ggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcat 189  Q
    |||||||| ||||| ||||||||||| || | || || ||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||    
T  20308414 ggttgcttctgaacgaccttctgaactctcaacagaatgttctgatcaactctctgatcaacattctgaactaactttctgaacttcagaattagttcat 20308315  T
Q  190 ggattcaatgtcctttgatttcatgtatcttggt 223  Q
     |||  ||||||||||||||| ||| ||||||||    
T  20308314 tgatcaaatgtcctttgattttatgcatcttggt 20308281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 20311893 - 20311760
Alignment:
Q  90 ggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcat 189  Q
    |||||||| ||||| ||||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||| ||||||    
T  20311893 ggttgcttctgaacgaccttctgaactctcatcagaacgttctgatcaactctctgatcaacattctgaactaactttctaaacttcagaattagttcat 20311794  T
Q  190 ggattcaatgtcctttgatttcatgtatcttggt 223  Q
     |||  |||||| |||||||| ||| ||||||||    
T  20311793 tgatcaaatgtcttttgattttatgcatcttggt 20311760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 18097326 - 18097534
Alignment:
Q  1 tgattgacccatgcaaagatgctttcctgaacgtacattcatgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggtt-gcttat 99  Q
    ||||||| ||||||||   | |||||||| || |||||| |||||||  ||||| ||||||||||||   ||| |||||||| |||||| ||| | ||||    
T  18097326 tgattgatccatgcaactgtactttcctggacatacatttatgtcacgttgtagtttgcatgttctt---catgttcttgatgattctgagtttgtttat 18097422  T
Q  100 gaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatg 199  Q
    |||||||||||||||| || |||| ||||||||||||||||            ||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  18097423 gaacaaccttctgaactctcatcagaacgttctgatcaact------------ttctgaactaactttctgaacttcagaattagttaatggattcaatg 18097510  T
Q  200 tcctttgatttcatgtatcttggt 223  Q
    | |||||||||| |||||||||||    
T  18097511 ttctttgatttcttgtatcttggt 18097534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 26193959 - 26194040
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  26193959 tctgatcaactttctgaactaactttctgaacttcagaattagttcatggattcaatgtcctttgatttcatgcatcttggt 26194040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 70 - 223
Target Start/End: Complemental strand, 27065689 - 27065547
Alignment:
Q  70 tcatattcttgat-aattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttc 168  Q
    |||| |||||||| |||| ||||||||||||||||||||||||||||  | |||| |||||||||||            |||||||||||||||| ||||    
T  27065689 tcatgttcttgatgaattatgggttgcttatgaacaaccttctgaactatcatcagaacgttctgat------------caacattctgaactaactttc 27065602  T
Q  169 tgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||| |||||||||||||||||| |||||||| ||| ||||||||    
T  27065601 tgaacttcagaattagttcatggattcaatgtcttttgattttatgcatcttggt 27065547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 205
Target Start/End: Original strand, 20318503 - 20318626
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttct 169  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | |||| |||||||||            |||||||||||||||||| |||||    
T  20318503 tcatgttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttctg------------atcaacattctgaactaactttct 20318590  T
Q  170 gaacttcagaattggttcatggattcaatgtccttt 205  Q
    |||| |||||||| ||||||||||||||||||||||    
T  20318591 gaacatcagaattagttcatggattcaatgtccttt 20318626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 12418380 - 12418310
Alignment:
Q  153 ttctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||| || |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  12418380 ttctgaacaaactttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 12418310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 25867783 - 25867726
Alignment:
Q  166 ttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  25867783 ttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 25867726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 22960409 - 22960352
Alignment:
Q  166 ttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||| || ||||||| |||||||||||||||||||| |||||||||||    
T  22960409 ttctgaacttcagagttagttcatgaattcaatgtcctttgatttcttgtatcttggt 22960352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 25867829 - 25867775
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaact 161  Q
    ||||||||| || |||| |||||||||||||||| ||||||||||||||||||||    
T  25867829 cttctgaactctcatcagaacgttctgatcaactttctgatcaacattctgaact 25867775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 37011542 - 37011484
Alignment:
Q  165 tttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||| |||| |||| ||||||||||||||||||||||| ||| ||||||||||||    
T  37011542 tttctgaatttcaaaattagttcatggattcaatgtcctttgttttaatgtatcttggt 37011484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 12418440 - 12418375
Alignment:
Q  70 tcatattcttgat-aattctgggttgcttatgaacaaccttctgaacacttatcataacgttctga 134  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||  | |||| ||||||||||    
T  12418440 tcatgttcttgatgaattctgggttgcttatgaacaaccttctgaactatcatcagaacgttctga 12418375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 18062718 - 18062813
Alignment:
Q  129 ttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaa-tgtcctttgatttcatgtatcttggtt 224  Q
    |||||||||||| | ||| |||||||||||||||  ||| ||||| ||||| || ||||||| |||||| |||||||| ||||| ||||||||||||    
T  18062718 ttctgatcaactttatgagcaacattctgaactatctttttgaac-tcagagttagttcatgaattcaagtgtccttttatttcttgtatcttggtt 18062813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 26193904 - 26193969
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaact 140  Q
    |||||||| | ||||||||||||||||||||||||||  ||  | |||| ||||||||||||||||    
T  26193904 ttcttgatgaatctgggttgcttatgaacaaccttctagactatcatcagaacgttctgatcaact 26193969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 37011658 - 37011536
Alignment:
Q  22 ctttcctgaacgtacattcatgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggtt-gcttatgaacaaccttctgaacactta 120  Q
    |||||||| || || ||| |||||||  ||||| ||||||||||||   ||| |||||||| ||| | |||| ||||| |||||||||||||||   | |    
T  37011658 ctttcctggacatatatttatgtcacgttgtagtttgcatgttctt---catgttcttgatgattttaggtttgcttaagaacaaccttctgaattatca 37011562  T
Q  121 tcataacgttctgatcaactatctga 146  Q
    ||| |||||||||||||||| |||||    
T  37011561 tcagaacgttctgatcaactttctga 37011536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 22960470 - 22960401
Alignment:
Q  92 ttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaact 161  Q
    ||||||||||||| ||||||||||  | |||| ||||||||   |||||  |||||||||||||||||||    
T  22960470 ttgcttatgaacacccttctgaactttcatcagaacgttctagccaactcgctgatcaacattctgaact 22960401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 1186931 - 1187006
Alignment:
Q  148 caacattctgaactaattttctgaacttcagaattggttcatggattcaa-tgtcctttgatttcatgtatcttggt 223  Q
    ||||||| |||||||| |||||||||| || | || ||||||| || ||| |||||||||||||| |||||||||||    
T  1186931 caacattttgaactaactttctgaact-caaagttagttcatgaatccaaatgtcctttgatttcttgtatcttggt 1187006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 20308473 - 20308433
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||||||| | |||||||||||| |||||||||||||||||    
T  20308473 ttcttgatgaatctgggttgcttctgaacaaccttctgaac 20308433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 37 - 223
Target Start/End: Original strand, 98 - 279
Alignment:
Q  37 attcatgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatc 136  Q
    |||||||||| |||||| |||||||||||||   ||| |||||||| | ||||||||||||||||||||||||||||||  | |||| ||||||||||||    
T  98 attcatgtca-aatgta-cttgcatgttctt---catgttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttctgatc 192  T
Q  137 aactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||  || ||| ||||||||    
T  193 aactctctgatcaacattctgaactaactttctgaacttcagaattagttcatggattcaatgtcctttggatttatgcatcttggt 279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 101; Significance: 3e-50; HSPs: 4)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 57624 - 57772
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaact 174  Q
    |||||||| | ||||||||||||||||||||||||||||||  | |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  57624 ttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttctgatcaactctctgatcaacattctgaactaactttctgaact 57723  T
Q  175 tcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||| ||||||||||||||||||||||| ||| ||| ||||||||    
T  57724 tcagaattagttcatggattcaatgtcctttgcttttatgcatcttggt 57772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 58774 - 58890
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    |||||||||  | |||| |||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  58774 cttctgaactatcatcagaacgttctgatcaactttctgatcaacattctaaactaactttctgaacttcagaattagttcatggattcaatgtcctttg 58873  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  58874 attttatgcatcttggt 58890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 86 - 223
Target Start/End: Original strand, 24275 - 24399
Alignment:
Q  86 tctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggt 185  Q
    ||||||||||||||||| ||||||||||||  | |||| |||||||||||||||| |||||||||||             ||||||||||||||||| ||    
T  24275 tctgggttgcttatgaataaccttctgaactatcatcagaacgttctgatcaactctctgatcaaca-------------ttctgaacttcagaattagt 24361  T
Q  186 tcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||| ||| ||| ||||||||    
T  24362 tcatggattcaatgtcctttgcttttatgcatcttggt 24399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 67075 - 67133
Alignment:
Q  165 tttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  67075 tttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 67133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 3e-50; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 22688132 - 22688280
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaact 174  Q
    |||||||| | ||||||||||||||||||||||||||||||  | |||| || ||||||||||||| |||||||||||||||||||||| ||| ||||||    
T  22688132 ttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaatgttctgatcaactctctgatcaacattctgaactaactttatgaact 22688231  T
Q  175 tcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  22688232 tcagaattagttcatggattcaatgtcctttgatttcatgcatcttggt 22688280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 70 - 221
Target Start/End: Complemental strand, 573860 - 573709
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttct 169  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | |||| |||||||| ||||||| |||||||||||||||||||||| |||||    
T  573860 tcatgttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttctaatcaactctctgatcaacattctgaactaactttct 573761  T
Q  170 gaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttg 221  Q
    ||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||    
T  573760 gaacttcagaattagttcatggattcattgtcctttgattttatgcatcttg 573709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 75 - 223
Target Start/End: Complemental strand, 12570181 - 12570032
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaaca-cttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaac 173  Q
    |||||||| | ||||||||||||||||||||||||||||||  || |||| |||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  12570181 ttcttgatgaatctgggttgcttatgaacaaccttctgaacttctcatcagaacgttctgatcaactctctgatcaacattttgaactaactttctgaac 12570082  T
Q  174 ttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    || |||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  12570081 tttagaattagttaatggattcaatgtcctttgatttcatgcatcttggt 12570032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 32937883 - 32938008
Alignment:
Q  99 tgaacaaccttctgaacacttatcataacgttctgatcaa-ctatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaa 197  Q
    ||||||||||||||| | || |||| |||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  32937883 tgaacaaccttctgagctctcatcagaacgttctgatcaaactctctgatcaacattctgaactaactttctgaacttcagaattagttcatggattcaa 32937982  T
Q  198 tgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||| ||| ||||||||    
T  32937983 tgtcctttgattttatgcatcttggt 32938008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 9503477 - 9503593
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  9503477 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 9503576  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  9503577 attttatgcatcttggt 9503593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 9514843 - 9514959
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  9514843 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 9514942  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  9514943 attttatgcatcttggt 9514959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 18650606 - 18650490
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  18650606 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 18650507  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  18650506 attttatgcatcttggt 18650490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 18662676 - 18662560
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  18662676 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 18662577  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  18662576 attttatgcatcttggt 18662560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 5337893 - 5337974
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  5337893 tctgatcaacattctgaactaattttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 5337974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 5347789 - 5347870
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  5347789 tctgatcaacattctgaactaattttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 5347870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 223
Target Start/End: Complemental strand, 45190437 - 45190296
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttct 169  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | |||| |||||||||||||||            |||||||||||| |||||    
T  45190437 tcatgttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttctgatcaac------------attctgaactaactttct 45190350  T
Q  170 gaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||| ||||||||    
T  45190349 gaacttcagaattagttcatggattcaatgtcttttgattttatgcatcttggt 45190296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 18660913 - 18660819
Alignment:
Q  129 ttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||| ||||  ||||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  18660913 ttctgaacaaccttctgagcaacattctgatctaactttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 18660819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 4456376 - 4456295
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||| |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  4456376 tctgaacaaccttctgaactgattttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 4456295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 4457440 - 4457359
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||| |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  4457440 tctgaacaaccttctgaactgattttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 4457359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 4467065 - 4466984
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||| |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  4467065 tctgaacaaccttctgaactgattttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 4466984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 16934751 - 16934886
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaact 174  Q
    |||||||| | |||||||||| |||||||||||||||||||  | |||| |||||||||||||||| ||| |||||||             |||||||||    
T  16934751 ttcttgatgaatctgggttgcctatgaacaaccttctgaactatcatcagaacgttctgatcaactctctaatcaaca-------------ttctgaact 16934837  T
Q  175 tcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  16934838 tcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 16934886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 17005411 - 17005546
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaact 174  Q
    |||||||| | |||||||||| |||||||||||||||||||  | |||| |||||||||||||||| ||| |||||||             |||||||||    
T  17005411 ttcttgatgaatctgggttgcctatgaacaaccttctgaactatcatcagaacgttctgatcaactctctaatcaaca-------------ttctgaact 17005497  T
Q  175 tcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  17005498 tcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 17005546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 223
Target Start/End: Original strand, 3606351 - 3606519
Alignment:
Q  41 atgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggtt-gcttatgaacaaccttctgaacacttatcataacgttctgatcaac 139  Q
    |||||||  ||||| ||||||||||||   ||| |||||||| |||||||||| |||||||||||||||||||||   | |||| |||||||||||||||    
T  3606351 atgtcacgttgtagtttgcatgttctt---catgttcttgatgattctgggtttgcttatgaacaaccttctgaattatcatcagaacgttctgatcaac 3606447  T
Q  140 tat-ctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |   |||||||||             |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  3606448 ttcactgatcaac-------------tttctgaacttcagaattagttcgtggattcaatgtcctttgatttcatgtatcttggt 3606519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1411 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold1411
Description:

Target: scaffold1411; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 86 - 234
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaact 174  Q
    |||||||| | ||||||||||||||||||||||||||||||  | |||| ||||||||||| ||||  ||||||||||||||||||||| ||||||||||    
T  86 ttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttctgattaacttcctgatcaacattctgaactaactttctgaact 185  T
Q  175 tcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  186 tcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 1311 - 1451
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttct 169  Q
    ||||||||||||| | || |||||||||||||||||||||||||||  | |||| |||||||||||||||| |||||||||||||||||||||| |||||    
T  1311 tcatattcttgatgaatcagggttgcttatgaacaaccttctgaactatcatcagaacgttctgatcaactttctgatcaacattctgaactaactttct 1410  T
Q  170 gaacttcagaattggttcatggattcaatgtcctttgattt 210  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  1411 gaacctcagaattagttcatggattcaatgtcctttgattt 1451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 12334 - 12482
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaact 174  Q
    |||||||| | ||||||||||||||||||||||||||||||  | |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  12334 ttcttgatgaatctgggttgcttatgaacaaccttctgaactatcatcagaacgttctgatcaactctctgatcaacattctgaactaactttctgaact 12433  T
Q  175 tcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||  |||||||||||||||||||||||||| ||  ||||||||    
T  12434 tcagaattacttcatggattcaatgtcctttgattttatccatcttggt 12482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 8e-48; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 75 - 223
Target Start/End: Complemental strand, 27988110 - 27987962
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaact 174  Q
    |||||||| | ||||||||||||||||||||||||||| ||  | |||| || ||||||||||||| |||||||||||||||||||||| ||||||||||    
T  27988110 ttcttgatgaatctgggttgcttatgaacaaccttctggactatcatcaaaatgttctgatcaactctctgatcaacattctgaactaactttctgaact 27988011  T
Q  175 tcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  27988010 tcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 27987962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 70 - 220
Target Start/End: Complemental strand, 19585376 - 19585226
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttct 169  Q
    |||| |||||||| | |||||||||||||||||||||||| |||||  | |||| |||||||||||||||| ||||||||||||| |||||||| |||||    
T  19585376 tcatgttcttgatgaatctgggttgcttatgaacaaccttttgaactatcatcagaacgttctgatcaactctctgatcaacattttgaactaactttct 19585277  T
Q  170 gaacttcagaattggttcatggattcaatgtcctttgatttcatgtatctt 220  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||| |||||    
T  19585276 gaacttcagaattagttcatggattcaatgtcatttgattttatgcatctt 19585226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 210
Target Start/End: Complemental strand, 19799289 - 19799166
Alignment:
Q  87 ctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggtt 186  Q
    ||||||||||| ||||| ||||||||||| || |||| |||||||||||||||| | |||||||||||||||||||| ||||||||| ||||| || |||    
T  19799289 ctgggttgcttctgaacgaccttctgaactctcatcaaaacgttctgatcaactttttgatcaacattctgaactaactttctgaacatcagagttagtt 19799190  T
Q  187 catggattcaatgtcctttgattt 210  Q
    ||||||||||||||||||||||||    
T  19799189 catggattcaatgtcctttgattt 19799166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 6544221 - 6544105
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  6544221 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 6544122  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  6544121 attttatgcatcttggt 6544105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 78 - 216
Target Start/End: Complemental strand, 10415223 - 10415083
Alignment:
Q  78 ttgataattctgggttg-cttatgaacaaccttctgaacacttatcataacgttctgatcaactat-ctgatcaacattctgaactaattttctgaactt 175  Q
    ||||| ||||||||||  ||||||||||||||||||||   | |||| |||||||||||| ||| | ||||||||| ||||||||||| |||||||||||    
T  10415223 ttgatgattctgggtttacttatgaacaaccttctgaattatcatcagaacgttctgatcgactttactgatcaactttctgaactaactttctgaactt 10415124  T
Q  176 cagaattggttcatggattcaatgtcctttgatttcatgta 216  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  10415123 cagaattagttcatggattcaatgtcctttgatttcatgta 10415083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 44896761 - 44896645
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  44896761 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 44896662  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  44896661 attttatgcatcttggt 44896645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 44907112 - 44906996
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  44907112 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 44907013  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  44907012 attttatgcatcttggt 44906996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 107 - 220
Target Start/End: Complemental strand, 5926271 - 5926158
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  5926271 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 5926172  T
Q  207 atttcatgtatctt 220  Q
    |||| ||| |||||    
T  5926171 attttatgcatctt 5926158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 107 - 220
Target Start/End: Complemental strand, 6533922 - 6533809
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  6533922 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 6533823  T
Q  207 atttcatgtatctt 220  Q
    |||| ||| |||||    
T  6533822 attttatgcatctt 6533809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 43982655 - 43982574
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  43982655 tctgatcaacattctgaactaattttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 43982574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 8500286 - 8500205
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  8500286 tctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttgattttatgcatcttggt 8500205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 8510756 - 8510675
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  8510756 tctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttgattttatgcatcttggt 8510675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 24541402 - 24541483
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||| ||| ||||||||    
T  24541402 tctgatcaacattctgaactaactttctgaacttcagagttagttcatggattcaatgtcctttgattttatgcatcttggt 24541483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 45552734 - 45552649
Alignment:
Q  89 gggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaact 174  Q
    ||||||||| ||||| ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  45552734 gggttgcttctgaacgaccttctgaactctcatcataacgttctgatcaactctctgatcaacattctgaactaactttctgaact 45552649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 5382484 - 5382578
Alignment:
Q  129 ttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||| ||||  ||||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  5382484 ttctgaacaaccttctgagcaacattctgatctaactttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 5382578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 5392138 - 5392232
Alignment:
Q  129 ttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||| ||||  ||||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  5392138 ttctgaacaaccttctgagcaacattctgatctaactttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 5392232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 26348865 - 26348959
Alignment:
Q  129 ttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||| ||||  ||||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  26348865 ttctgaacaaccttctgagcaacattctgatctaactttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 26348959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 26363885 - 26363979
Alignment:
Q  129 ttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||| ||||  ||||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  26363885 ttctgaacaaccttctgagcaacattctgatctaactttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 26363979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 11627134 - 11627228
Alignment:
Q  129 ttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||| ||||  ||||| ||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||||||    
T  11627134 ttctgaacaaccttctgagcaacattctgatctaagtttctgaacttcagaattagttcatggatttaatgtcctttgattttatgcatcttggt 11627228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 12769663 - 12769589
Alignment:
Q  149 aacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||| ||| |||||||||||||| ||||||| ||||||| |||||||||||| ||||| |||||    
T  12769663 aacattctgaactaactttatgaacttcagaattagttcatgaattcaatttcctttgatttcttgtatgttggt 12769589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 115
Target Start/End: Complemental strand, 19799334 - 19799289
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||| |||||||||| |||||||||||| |||||||||||||||||    
T  19799334 tcatgttcttgataaatctgggttgcttctgaacaaccttctgaac 19799289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 24541282 - 24541327
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||| |||||||||| |||||||||||| |||||||||||||||||    
T  24541282 tcatgttcttgataaatctgggttgcttctgaacaaccttctgaac 24541327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 9006468 - 9006374
Alignment:
Q  129 ttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattc-aatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||| | ||| ||||||||| |||||| ||||||||| ||| | || ||||||  |||| ||| |||||||||||| |||||||||||    
T  9006468 ttctgatcaactttttgagcaacattctaaactaactttctgaac-tcaaacttagttcattaattcaaatatcctttgatttcttgtatcttggt 9006374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 115
Target Start/End: Complemental strand, 45552797 - 45552752
Alignment:
Q  70 tcatattcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||| |||||||||| ||| |||||||| |||||||||||||||||    
T  45552797 tcatgttcttgataaatcttggttgcttctgaacaaccttctgaac 45552752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 43982694 - 43982646
Alignment:
Q  91 gttgcttatgaacaaccttctgaacacttatcataacgttctgatcaac 139  Q
    ||||||| ||||||||||||||| | || |||| |||||||||||||||    
T  43982694 gttgcttctgaacaaccttctgagctctcatcagaacgttctgatcaac 43982646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 94; Significance: 5e-46; HSPs: 5)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 114972 - 115121
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacactt-atcataacgttctgatcaactatctgatcaacattctgaactaattttctgaac 173  Q
    |||||||| | ||||||||||||||||||||| || ||||| ||| |||| |||||||||||||||| |||||||||||||||||||||| ||||||| |    
T  114972 ttcttgatgaatctgggttgcttatgaacaacattttgaactcttcatcagaacgttctgatcaactctctgatcaacattctgaactaactttctgatc 115071  T
Q  174 ttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  115072 ttcagaattagttcatgaattcaatgtcctttgatttcatgcatcttggt 115121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 234889 - 235005
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||||| || |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  234889 cttctgaactctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaacttcagaattagttcatggattcaatgtcctttg 234988  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  234989 attttatgcatcttggt 235005  T

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Target: scaffold0014; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 223
Target Start/End: Original strand, 153985 - 154114
Alignment:
Q  86 tctgggttgcttatgaacaaccttctgaacactt-atcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattgg 184  Q
    |||| ||||||||||||||||||| ||||| ||| |||| |||||||||||||||| |||||||||||||||||||          |||||||||||| |    
T  153985 tctgagttgcttatgaacaaccttatgaactcttcatcagaacgttctgatcaactctctgatcaacattctgaac---------aaacttcagaattag 154075  T
Q  185 ttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  154076 ttcatggattcaatgtcctttgttttcatgcatcttggt 154114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 146231 - 146175
Alignment:
Q  166 ttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  146231 ttctgaactttagaattagttcatggatt-aatgtcctttgatttcatgcatcttggt 146175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 146297 - 146233
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaac 139  Q
    |||||||| | | ||||||||||||||||||| ||| |||| || |||| |||||||||||||||    
T  146297 ttcttgatgaatatgggttgcttatgaacaactttcggaactctcatcagaacgttctgatcaac 146233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 75 - 223
Target Start/End: Complemental strand, 18356 - 18208
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaact 174  Q
    |||||||| | ||||||||||||||||||||||||||||||    |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  18356 ttcttgatgaatctgggttgcttatgaacaaccttctgaacttacatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaact 18257  T
Q  175 tcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
     ||||||| ||||||||||| ||||||||||||||| ||| ||||||||    
T  18256 ccagaattagttcatggatttaatgtcctttgattttatgcatcttggt 18208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 37 - 223
Target Start/End: Complemental strand, 10944 - 10761
Alignment:
Q  37 attcatgtcacaatgtagcttgcatgttcttggtcatattcttgataattctgggtt-gcttatgaacaaccttctgaacacttatcataacgttctgat 135  Q
    |||||||||||| ||||  ||||||||||||   ||| |||||||| |||||||||| ||||||||||||||||||||||  | |||| |||||||||||    
T  10944 attcatgtcaca-tgtacgttgcatgttctt---catgttcttgatgattctgggtttgcttatgaacaaccttctgaactttcatcaaaacgttctgat 10849  T
Q  136 caactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||| |  ||||| ||||||||||||||||||| |||||||||||||| ||||||| ||||| |||||||||||||| |||||||||||    
T  10848 caattcactgataaacattctgaactaattttatgaacttcagaattagttcatgaattcattgtcctttgatttcttgtatcttggt 10761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 33332 - 33465
Alignment:
Q  91 gttgcttatgaacaaccttctgaacacttatcataacgttctgatcaa-ctatctgatcaacattctgaactaattttctgaacttcagaattggttcat 189  Q
    ||||||| ||||||||||||||| | || |||| |||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| ||||||    
T  33332 gttgcttctgaacaaccttctgagctctcatcagaacgttctgatcaaactctctgatcaacattctgaactaactttctgaacttcagaattagttcat 33431  T
Q  190 ggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||||||||||||||| ||| ||||||||    
T  33432 ggattcaatgtcctttgattttatgcatcttggt 33465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1468 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold1468
Description:

Target: scaffold1468; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 92 - 223
Target Start/End: Complemental strand, 915 - 784
Alignment:
Q  92 ttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatgg 191  Q
    |||||||||||||||||||||||   | |||| |||||||||||| ||| | |||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  915 ttgcttatgaacaaccttctgaattatcatcagaacgttctgatccactctttgatcaacattctgaactaactttctgaactttagaattagttcatgg 816  T
Q  192 attcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||| || ||||||||    
T  815 attcaatgtcctttgatttcttgcatcttggt 784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 8557 - 8673
Alignment:
Q  107 cttctgaacacttatcataacgttctgatcaactatctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttg 206  Q
    ||||||| | || |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  8557 cttctgagctctcatcagaacgttctgatcaactttctgatcaacattctgaactaactttctgaactttagaattagttcatggattcaatgtcctttg 8656  T
Q  207 atttcatgtatcttggt 223  Q
    |||| ||| ||||||||    
T  8657 attttatgcatcttggt 8673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 62; Significance: 7e-27; HSPs: 3)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 9825 - 9744
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||| ||| ||||||||    
T  9825 tctgatcaacattctgaactaactttctgaacttcagagttagttcatggattcaatgtcctttgattttatgcatcttggt 9744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 9952 - 9912
Alignment:
Q  75 ttcttgataattctgggttgcttatgaacaaccttctgaac 115  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  9952 ttcttgataaatctgggttgcttctgaacaaccttctgaac 9912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 9866 - 9816
Alignment:
Q  89 gggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaac 139  Q
    ||||||||| ||||| ||||||||||| || |||| |||||||||||||||    
T  9866 gggttgcttctgaacgaccttctgaactctcatcagaacgttctgatcaac 9816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1705 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold1705
Description:

Target: scaffold1705; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 191 - 110
Alignment:
Q  142 tctgatcaacattctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    ||||||||| |||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  191 tctgatcaagattctgaattaactttctgaacttcagaattagttcatggattcaatgtcctttgattttatgcatcttggt 110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1705; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 234 - 183
Alignment:
Q  87 ctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaa 138  Q
    ||||||||||| ||||||||||||||||| || |||| ||||||||||||||    
T  234 ctgggttgcttctgaacaaccttctgaactctcatcagaacgttctgatcaa 183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 223
Target Start/End: Complemental strand, 22987 - 22834
Alignment:
Q  55 cttgcatgttcttggtcatattcttgataattctgggttgcttatgaacaaccttctgaacacttatcataacgttctgatcaactatctgatcaacatt 154  Q
    |||||||||||||   ||| |||||||| | |||||||||||||||||||||| |||||||  | |||| |||||||||||||||| |||||            
T  22987 cttgcatgttctt---catgttcttgatgaatctgggttgcttatgaacaaccgtctgaactatcatcagaacgttctgatcaactctctga-------- 22899  T
Q  155 ctgaactaattttctgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
        ||||| |||||||||||||||||| ||||||||||||||||||||||| ||| ||| || |||||    
T  22898 ----actaactttctgaacttcagaattagttcatggattcaatgtcctttgtttttatgcattttggt 22834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 13365 - 13291
Alignment:
Q  148 caacattctgaactaattttctgaacttcagaattggttcatggattcaa-tgtcctttgatttcatgtatcttgg 222  Q
    ||||||||| |||||| |||||||||| |||| || ||||||| |||||| |||||||||||||| ||||||||||    
T  13365 caacattctaaactaactttctgaact-cagagttagttcatgaattcaaatgtcctttgatttcttgtatcttgg 13291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 54148 - 54094
Alignment:
Q  169 tgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||| ||| ||| ||| |||||||||||||||| |||||||||||    
T  54148 tgaacttcagaattagtttatgaatttaatgtcctttgatttcttgtatcttggt 54094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 58100 - 58046
Alignment:
Q  169 tgaacttcagaattggttcatggattcaatgtcctttgatttcatgtatcttggt 223  Q
    |||||||||||||| ||| ||| ||| |||||||||||||||| |||||||||||    
T  58100 tgaacttcagaattagtttatgaatttaatgtcctttgatttcttgtatcttggt 58046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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