View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9612A_low_142 (Length: 250)

Name: NF9612A_low_142
Description: NF9612A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9612A_low_142
NF9612A_low_142
[»] chr5 (21 HSPs)
chr5 (41-238)||(3639753-3639949)
chr5 (40-202)||(19456228-19456389)
chr5 (40-202)||(27498748-27498911)
chr5 (40-202)||(30485845-30486008)
chr5 (41-202)||(15641123-15641285)
chr5 (40-202)||(38684225-38684387)
chr5 (96-202)||(25586949-25587054)
chr5 (96-202)||(37495064-37495169)
chr5 (40-202)||(8484678-8484841)
chr5 (61-202)||(32059478-32059620)
chr5 (40-200)||(18207226-18207387)
chr5 (61-202)||(19145450-19145591)
chr5 (152-202)||(930615-930665)
chr5 (96-202)||(12398523-12398628)
chr5 (40-202)||(11926518-11926682)
chr5 (96-191)||(27487630-27487724)
chr5 (40-90)||(5067391-5067441)
chr5 (41-139)||(7085644-7085743)
chr5 (40-89)||(22693066-22693115)
chr5 (41-89)||(21236380-21236428)
chr5 (40-88)||(37495186-37495234)
[»] chr6 (12 HSPs)
chr6 (40-202)||(34147363-34147526)
chr6 (40-202)||(34159979-34160142)
chr6 (41-202)||(11448888-11449050)
chr6 (96-202)||(9690713-9690818)
chr6 (40-202)||(15360115-15360278)
chr6 (40-202)||(28672084-28672247)
chr6 (40-166)||(3222653-3222779)
chr6 (40-202)||(9238992-9239155)
chr6 (40-196)||(654163-654320)
chr6 (61-166)||(12390478-12390584)
chr6 (41-139)||(21148529-21148627)
chr6 (96-202)||(12591654-12591759)
[»] chr4 (21 HSPs)
chr4 (40-202)||(40058869-40059032)
chr4 (40-202)||(34844775-34844938)
chr4 (40-202)||(27528812-27528975)
chr4 (40-202)||(52983636-52983799)
chr4 (40-202)||(33696296-33696459)
chr4 (96-202)||(25852231-25852336)
chr4 (96-202)||(33992643-33992748)
chr4 (96-202)||(34835546-34835651)
chr4 (40-166)||(5609219-5609346)
chr4 (40-202)||(32986214-32986377)
chr4 (49-139)||(53787083-53787175)
chr4 (40-202)||(19660549-19660712)
chr4 (40-161)||(20566408-20566530)
chr4 (40-168)||(32990486-32990615)
chr4 (96-202)||(13771557-13771663)
chr4 (41-202)||(46714409-46714572)
chr4 (111-202)||(43719154-43719245)
chr4 (116-202)||(1985853-1985939)
chr4 (96-202)||(13584329-13584434)
chr4 (96-202)||(32942387-32942492)
chr4 (116-202)||(49287875-49287961)
[»] chr3 (24 HSPs)
chr3 (40-202)||(18176904-18177067)
chr3 (40-202)||(15566517-15566679)
chr3 (40-202)||(30257641-30257804)
chr3 (41-202)||(53233928-53234090)
chr3 (40-202)||(26174130-26174293)
chr3 (40-202)||(35492928-35493091)
chr3 (40-202)||(40133466-40133629)
chr3 (61-201)||(45272454-45272595)
chr3 (40-202)||(52821653-52821815)
chr3 (40-202)||(53424194-53424356)
chr3 (96-202)||(26108309-26108414)
chr3 (96-202)||(30807228-30807333)
chr3 (96-202)||(40940842-40940947)
chr3 (41-202)||(8456168-8456330)
chr3 (61-202)||(25289752-25289894)
chr3 (41-202)||(45529772-45529934)
chr3 (116-202)||(49167073-49167159)
chr3 (96-202)||(46576365-46576470)
chr3 (41-139)||(1692914-1693012)
chr3 (40-202)||(49258279-49258442)
chr3 (40-161)||(8097296-8097418)
chr3 (64-202)||(21362960-21363099)
chr3 (96-197)||(39041927-39042027)
chr3 (40-89)||(53848451-53848500)
[»] chr2 (17 HSPs)
chr2 (96-202)||(14946796-14946902)
chr2 (40-187)||(15037991-15038139)
chr2 (40-202)||(44946070-44946233)
chr2 (40-202)||(30466847-30467010)
chr2 (96-202)||(27290605-27290710)
chr2 (40-145)||(34516431-34516536)
chr2 (61-202)||(24196021-24196161)
chr2 (40-202)||(13266507-13266669)
chr2 (41-187)||(17324798-17324944)
chr2 (96-202)||(10582065-10582170)
chr2 (40-202)||(11941227-11941390)
chr2 (41-139)||(35171880-35171979)
chr2 (62-202)||(5394034-5394175)
chr2 (111-201)||(40591201-40591290)
chr2 (96-202)||(33827648-33827753)
chr2 (111-200)||(28194223-28194311)
chr2 (98-202)||(8192428-8192531)
[»] chr7 (25 HSPs)
chr7 (40-202)||(7175879-7176042)
chr7 (40-202)||(7275298-7275461)
chr7 (40-202)||(22119909-22120072)
chr7 (40-202)||(40542927-40543090)
chr7 (41-202)||(27704023-27704184)
chr7 (40-202)||(2751292-2751455)
chr7 (40-202)||(21835172-21835335)
chr7 (61-202)||(2103076-2103218)
chr7 (41-202)||(10091209-10091371)
chr7 (40-202)||(11997870-11998033)
chr7 (42-202)||(22703507-22703668)
chr7 (40-166)||(654722-654848)
chr7 (40-202)||(28089837-28090003)
chr7 (116-202)||(42814885-42814971)
chr7 (40-89)||(27312287-27312336)
chr7 (98-202)||(17212074-17212177)
chr7 (61-202)||(23012546-23012688)
chr7 (96-202)||(19421252-19421357)
chr7 (96-202)||(9718062-9718167)
chr7 (96-202)||(21217908-21218013)
chr7 (96-202)||(42913588-42913693)
chr7 (152-202)||(47380919-47380969)
chr7 (40-89)||(31197725-31197774)
chr7 (61-89)||(8943439-8943467)
chr7 (98-202)||(23330816-23330919)
[»] chr1 (19 HSPs)
chr1 (61-202)||(8077664-8077806)
chr1 (40-202)||(4621254-4621417)
chr1 (40-202)||(15059419-15059582)
chr1 (40-202)||(24674410-24674573)
chr1 (102-202)||(1138596-1138695)
chr1 (41-202)||(7766745-7766907)
chr1 (40-202)||(24122040-24122203)
chr1 (61-202)||(32729562-32729703)
chr1 (40-200)||(9500372-9500533)
chr1 (42-202)||(1378915-1379075)
chr1 (40-139)||(30677256-30677356)
chr1 (116-210)||(45859137-45859230)
chr1 (40-202)||(27454881-27455046)
chr1 (124-176)||(12993946-12993998)
chr1 (96-166)||(8254827-8254896)
chr1 (96-202)||(46607827-46607932)
chr1 (129-202)||(24216995-24217068)
chr1 (41-89)||(23734248-23734296)
chr1 (41-89)||(23741440-23741488)
[»] chr8 (17 HSPs)
chr8 (40-202)||(2618207-2618370)
chr8 (40-202)||(4718666-4718829)
chr8 (40-202)||(34237672-34237835)
chr8 (40-202)||(39349277-39349440)
chr8 (96-202)||(3734698-3734803)
chr8 (96-202)||(27746410-27746515)
chr8 (40-202)||(21603251-21603414)
chr8 (40-202)||(28193495-28193658)
chr8 (49-127)||(2166793-2166871)
chr8 (40-200)||(8765543-8765704)
chr8 (97-202)||(14632975-14633079)
chr8 (40-166)||(15259423-15259550)
chr8 (96-161)||(21667612-21667676)
chr8 (40-166)||(6953025-6953151)
chr8 (96-139)||(28964117-28964159)
chr8 (112-202)||(36848839-36848929)
chr8 (40-89)||(2639428-2639477)
[»] scaffold0019 (1 HSPs)
scaffold0019 (40-200)||(161828-161989)
[»] scaffold0576 (1 HSPs)
scaffold0576 (40-202)||(5099-5262)
[»] scaffold0623 (1 HSPs)
scaffold0623 (61-202)||(1094-1236)
[»] scaffold0366 (2 HSPs)
scaffold0366 (61-202)||(9337-9479)
scaffold0366 (96-202)||(12075-12180)
[»] scaffold0459 (1 HSPs)
scaffold0459 (96-202)||(10768-10873)
[»] scaffold0070 (1 HSPs)
scaffold0070 (40-166)||(40378-40504)
[»] scaffold0028 (1 HSPs)
scaffold0028 (105-202)||(27793-27890)
[»] scaffold0217 (1 HSPs)
scaffold0217 (40-201)||(7326-7488)
[»] scaffold0026 (1 HSPs)
scaffold0026 (62-202)||(97405-97546)
[»] scaffold0199 (1 HSPs)
scaffold0199 (129-202)||(8514-8587)
[»] scaffold0102 (1 HSPs)
scaffold0102 (40-89)||(39223-39272)


Alignment Details
Target: chr5 (Bit Score: 158; Significance: 3e-84; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 41 - 238
Target Start/End: Complemental strand, 3639949 - 3639753
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcggggctgagctaaagccagagcatagctccgtatggacttagtccaccgaaatta 140  Q
    ||||||| |||| |||||| |||| ||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3639949 caagaatcgactaatctgaggggatcaatctcactgtccacttgcggggctgagctaaagccagagcatagctccgtatggacttagtccaccgaaatta 3639850  T
Q  141 ccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacctccaaatgagttaaaatactcacaatattgttcaac 238  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3639849 ccaccaaagataatcgaacctaagacctggagaagagcaaactccaaaatctcaagccaacc-ccaaatgagttaaaatactcacaatattgttcaac 3639753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 19456228 - 19456389
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcggggctgag-ctaaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    |||||||| |||| ||| || |||||||||| |||||||||||||||||||   |  ||||||||||||| ||||| |||||||||||| ||||||||||    
T  19456228 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaat 19456326  T
Q  139 taccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |  ||||| ||   ||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  19456327 tggcaccagag-ggatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 19456389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 27498748 - 27498911
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||  |||||||||||| |||||||||    
T  27498748 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctatgtatggacttagcccaccgaaa 27498846  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |  ||| ||||||||||||| ||  ||||||||||    
T  27498847 ttggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagattccaagccaacc 27498911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 30486008 - 30485845
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcggggc--tgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||   |    ||||||||||||| ||||| |||||||||||| |||||||||    
T  30486008 ccaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggcatcgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 30485910  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |    | ||||||||||||| ||| ||||||||||    
T  30485909 ttgacaccagagtgaatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaacc 30485845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 15641123 - 15641285
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    ||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| ||||||||||    
T  15641123 caagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaat 15641221  T
Q  139 taccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |  | ||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  15641222 tggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 15641285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 38684387 - 38684225
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcggggctgagct-aaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    |||||||| |||| ||| || |||||||||| |||||| |||||||||||    | | |||||||||||| ||||| |||||||||||| ||||||||||    
T  38684387 ccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggcccgtttaaagccagagca-agctctgtatggacttagcccaccgaaat 38684289  T
Q  139 taccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| |||| |||||    
T  38684288 tggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaacc 38684225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 25587054 - 25586949
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| |||    
T  25587054 taaagccagagca-agctctgtatggacttagcccaccgaaattggcaccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaa 25586956  T
Q  196 gccaacc 202  Q
    |||||||    
T  25586955 gccaacc 25586949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 37495169 - 37495064
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| ||||| |||||||||||| ||||| |||||  ||||| ||  |||||||||| |||| |   || ||||||||||||| |||||||    
T  37495169 taaagccagagca-agctctgtatggacttagcccaccaaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaa 37495071  T
Q  196 gccaacc 202  Q
    |||||||    
T  37495070 gccaacc 37495064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 8484678 - 8484841
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| ||||| |||||| |||||||||    
T  8484678 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatgaacttagcccaccgaaa 8484776  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||| ||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  8484777 ttggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaacc 8484841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 202
Target Start/End: Original strand, 32059478 - 32059620
Alignment:
Q  61 gggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaa 158  Q
    |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||||  ||||| |   |||||||    
T  32059478 gggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaattggcaccagaaggaatcgaa 32059576  T
Q  159 cctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||| |||| |   || ||||||||||||| ||| ||||||||||    
T  32059577 cctgagacctttggaggagcaaactccaagatcccaagccaacc 32059620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 200
Target Start/End: Complemental strand, 18207387 - 18207226
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  ||    |||||||||| || ||||| |||||||||||| |||||||||    
T  18207387 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggcctcgtttaaagccagaaca-agctctgtatggacttagcccaccgaaa 18207289  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaa 200  Q
    ||  ||||  ||  |||||||||| |||| |   || ||||||||||||| ||| ||| ||||    
T  18207288 ttggcaccggagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaa 18207226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 202
Target Start/End: Original strand, 19145450 - 19145591
Alignment:
Q  61 gggaccaatcacaccgcccacttgcggggctgagc---taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcga 157  Q
    |||||||||| ||||||||||||||||||  || |   ||||||||||||| ||||| |||||||||| | |||||||||||  ||||| ||  ||||||    
T  19145450 gggaccaatcccaccgcccacttgcgggg--gaccatttaaagccagagcaaagctctgtatggactt-gcccaccgaaattggcaccagagggaatcga 19145546  T
Q  158 acctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||  |||| | |||| ||||| ||||||| ||| |||| |||||    
T  19145547 accggagaccttgagaggagcatactccaagatcccaagtcaacc 19145591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 930615 - 930665
Alignment:
Q  152 aatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||||||||| |||||| |||| |||||||||| |||||||||||||||||    
T  930615 aatcgaacctgagactttgagaggagcaaactctaaaatctcaagccaacc 930665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 12398523 - 12398628
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| ||||| ||||| |||||| |||||||||||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| |||    
T  12398523 taaagccagagca-agctctgtatgaacttaggccaccgaaattgacaccatagggaatcgaacctgagacctttggaggagcaaactccaagatcccaa 12398621  T
Q  196 gccaacc 202  Q
    |||||||    
T  12398622 gccaacc 12398628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 11926518 - 11926682
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcggggctgagc---taaagccagagcatagctccgtatggacttagtccaccgaa 136  Q
    |||||||| |||| ||| || |||||||||| |||| |||||||||||||     |   ||||||||||||| ||||| |||||||||||| ||||||||    
T  11926518 ccaagaatcgactaatccgaggggaccaatcccaccacccacttgcggggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaa 11926616  T
Q  137 attaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||  ||||| ||  |||| ||||| |||| |   || ||||||||||||| ||| ||| ||||||    
T  11926617 attggcaccagagggaatctaacctgagacctctggaggagcaaactccaagatcccaaaccaacc 11926682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 191
Target Start/End: Original strand, 27487630 - 27487724
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatc 191  Q
    |||||| |||||| ||||| ||||||||||||||||||||||||  |||||||    ||| ||||| |||| |   ||||||||||||||||||||    
T  27487630 taaagctagagca-agctctgtatggacttagtccaccgaaattggcaccaaatgggatcaaacctgagacctctggaagagcaaactccaaaatc 27487724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 5067441 - 5067391
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcggggc 90  Q
    |||||||| |||| ||| || |||||||||| |||||||||||||||||||    
T  5067441 ccaagaatcgactaatcagaggggaccaatcccaccgcccacttgcggggc 5067391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 7085644 - 7085743
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    ||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||| ||||||| ||||| |||||||||||| ||||||||||    
T  7085644 caagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagtcagagca-agctctgtatggacttagcccaccgaaat 7085742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 22693115 - 22693066
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg 89  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||    
T  22693115 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggg 22693066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 21236380 - 21236428
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg 89  Q
    ||||||| |||| |||||| ||||| |||| ||||||||||||||||||    
T  21236380 caagaatcgactaatctgaggggactaatcccaccgcccacttgcgggg 21236428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 37495234 - 37495186
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcggg 88  Q
    |||||||| |||| ||| || |||||||||| |||||||||||||||||    
T  37495234 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggg 37495186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 34147526 - 34147363
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  34147526 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 34147428  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| ||||||   |||||||||||||||| ||| ||||||||||    
T  34147427 ttggcaccagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaacc 34147363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 34160142 - 34159979
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  34160142 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 34160044  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| ||||||   |||||||||||||||| ||| ||||||||||    
T  34160043 ttggcaccagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaacc 34159979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 11449050 - 11448888
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    ||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| ||||||||||    
T  11449050 caagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaat 11448952  T
Q  139 taccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |  ||||| ||| |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  11448951 tggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 11448888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 9690713 - 9690818
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccacca-aagataatcgaacctaagacttggagaagagcaaactccaaaatctca 194  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||  ||| | |||| ||||||||||||||| |   |||||||||||||||||||||||    
T  9690713 taaagccagagca-agctctgtatggacttagcccaccgaaattgacactagaaga-aatcgaacctaagacctctggaagagcaaactccaaaatctca 9690810  T
Q  195 agccaacc 202  Q
    | ||||||    
T  9690811 aaccaacc 9690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 15360115 - 15360278
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||| ||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  15360115 ccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 15360213  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  15360214 ttggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaacc 15360278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 28672247 - 28672084
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcg--gggctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| |||||||||||||||  ||||     |||||||| | || ||||| |||||||||||| ||||| |||    
T  28672247 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgaggggcccgtttaaagccaaaaca-agctctgtatggacttagcccaccaaaa 28672149  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  ||||||||||||||| |  ||| ||||||||||||| |||||||| |||||    
T  28672148 ttgacaccagagggaatcgaacctaagacctctagaggagcaaactccaagatctcaagtcaacc 28672084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 3222653 - 3222779
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcggggctgag-ctaaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    |||||||| |||| ||| || |||||||||| |||||||||||||||||||   |  ||||| ||||||| ||||| |||||||||||| ||||||||||    
T  3222653 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggccccgtttaaagacagagca-agctctgtatggacttagcccaccgaaat 3222751  T
Q  139 taccaccaaagataatcgaacctaagac 166  Q
    |  ||||| ||  |||||||||| ||||    
T  3222752 tggcaccagagggaatcgaacctgagac 3222779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 9239155 - 9238992
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |  |  |||||||| |||| |||||  ||||||||||  |||||||||    
T  9239155 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagccaaagca-agctctatatggacttaacccaccgaaa 9239057  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  9239056 ttggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 9238992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 654163 - 654320
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcggg-gctgagct-aaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||| ||| |||| ||| || |||||||||| ||||||||||||||||| ||   | | |||||||||||| ||||| |||||||||||| |||||||||    
T  654163 ccaataatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 654261  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaag 196  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||    
T  654262 ttggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaag 654320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 12390584 - 12390478
Alignment:
Q  61 gggaccaatcacaccgcccacttgcgggg---ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcga 157  Q
    |||||||||| ||||||||||||||||||   |||   ||||||||||||| ||||| |||||||||||| |||||||||||  ||||| ||  ||||||    
T  12390584 gggaccaatcccaccgcccacttgcgggggccctgtt-taaagccagagca-agctctgtatggacttagcccaccgaaattggcaccagagggaatcga 12390487  T
Q  158 acctaagac 166  Q
    |||| ||||    
T  12390486 acctgagac 12390478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 21148529 - 21148627
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcggggctgag-ctaaagccagagcatagctccgtatggacttagtccaccgaaatt 139  Q
    ||||||| |||| ||| || |||||||||| |||||||||||||||||||   |  ||||| ||||||| ||||| |||||||||||| ||| |||||||    
T  21148529 caagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggccccgtttaaagtcagagca-agctctgtatggacttagcccatcgaaatt 21148627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 12591759 - 12591654
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| ||||| |||||||||||| |||| ||||||  ||| | ||  |||||||||| |||| |   || ||||||||||||| ||| |||    
T  12591759 taaagccagagca-agctctgtatggacttagcccactgaaattggcacgagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaa 12591661  T
Q  196 gccaacc 202  Q
    |||||||    
T  12591660 gccaacc 12591654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 40058869 - 40059032
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  40058869 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 40058967  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||| |||||||||| |||| |  ||| ||||||||||||| ||| ||||||||||    
T  40058968 ttggcaccagagagaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaacc 40059032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 34844775 - 34844938
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  34844775 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 34844873  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||| |||||||||| |||| |   || ||||||||||||| ||||||||| ||||    
T  34844874 ttggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatctcaagcaaacc 34844938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 27528812 - 27528975
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  27528812 ccaagaatcgactaatccgaggggaccaatctcaccgcccacttgcgggggccccgtataaagccagagca-agctctgtatggacttagcccaccgaaa 27528910  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  27528911 ttggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 27528975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 52983799 - 52983636
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||| ||||    
T  52983799 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccactgaaa 52983701  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||||||||||||||    
T  52983700 ttggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaacc 52983636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 33696296 - 33696459
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| ||  ||||||||| ||||||||||||||||||  |  |  ||||||||||||| ||||| |||||||||||| |||||||||    
T  33696296 ccaagaattgactaatccgagaggaccaatctcaccgcccacttgcgggggccccatttaaagccagagca-agctctgtatggacttagcccaccgaaa 33696394  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  ||| |||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  33696395 ttggcaccagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 33696459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 25852336 - 25852231
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| |||    
T  25852336 taaagccagagca-agctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaa 25852238  T
Q  196 gccaacc 202  Q
    |||||||    
T  25852237 gccaacc 25852231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 33992748 - 33992643
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| ||||  |||||||||||| |||||||||||  ||||| ||| ||||||||||||||| |   || ||||||||||||| ||| |||    
T  33992748 taaagccagagca-agctatgtatggacttagcccaccgaaattggcaccagagagaatcgaacctaagacctctggaggagcaaactccaagatcccaa 33992650  T
Q  196 gccaacc 202  Q
     ||||||    
T  33992649 accaacc 33992643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 34835651 - 34835546
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    |||||||||| ||||||||||||||||||||| |||||||||||  ||||| ||  |||||||| | |||| |  ||| |||||||||| || ||| |||    
T  34835651 taaagccaga-catagctccgtatggacttagcccaccgaaattgacaccagagggaatcgaacatgagaccttaagaggagcaaactctaagatcccaa 34835553  T
Q  196 gccaacc 202  Q
    |||||||    
T  34835552 gccaacc 34835546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 5609219 - 5609346
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||| ||||| ||||| ||||||||||||  |  |  ||||||||||||| ||||| |||||||||||| |||||||||    
T  5609219 ccaagaatcgactaatccgaggggatcaatcccaccgtccacttgcgggggccccatttaaagccagagca-agctctgtatggacttagcccaccgaaa 5609317  T
Q  138 ttaccaccaaagataatcgaacctaagac 166  Q
    ||  ||||| ||| |||||||||| ||||    
T  5609318 ttggcaccagagagaatcgaacctgagac 5609346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 32986377 - 32986214
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| ||||  || || |||||||||| ||||||||||||||||||  |  |  ||||| ||||||| ||||| |||||||||||| |||||||||    
T  32986377 ccaagaatcgactattccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagagca-agctctgtatggacttagcccaccgaaa 32986279  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  ||| |||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  32986278 ttggcaccagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 32986214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 53787083 - 53787175
Alignment:
Q  49 gactgatctgatgggaccaatcacaccgcccacttgcgggg-ctgagct-aaagccagagcatagctccgtatggacttagtccaccgaaatt 139  Q
    |||| |||||| ||||| |||| ||||||||| |||||||| ||  | | |||||||||||||||||||| |||||||||| |||||||||||    
T  53787083 gactaatctgaggggactaatcccaccgcccatttgcgggggctccgtttaaagccagagcatagctccgcatggacttagcccaccgaaatt 53787175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 19660549 - 19660712
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg---ctgagctaaagccagagcatagctccgtatggacttagtccaccgaa 136  Q
    |||||||| |||| ||| || |||| ||||| ||||||||||||||||||   |||   ||||||||||||| ||||| |||||||||||  ||||||||    
T  19660549 ccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccctgtt-taaagccagagca-agctctgtatggacttatcccaccgaa 19660646  T
Q  137 attaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||  || || ||| |||| ||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  19660647 atttgcatcagagagaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaacc 19660712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 161
Target Start/End: Complemental strand, 20566530 - 20566408
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgc-ggggctgag-ctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| |||||| |||||||||| || ||||||||||| ||||||  |  ||||||||||||| ||||| |||||||||| | |||||||||    
T  20566530 ccaagaatcgactaatctgaggggaccaatcccagcgcccacttgcgggggctccgtttaaagccagagca-agctctgtatggactttgcccaccgaaa 20566432  T
Q  138 ttaccaccaaagataatcgaacct 161  Q
    ||  ||||| ||  ||||||||||    
T  20566431 ttggcaccagagggaatcgaacct 20566408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 168
Target Start/End: Complemental strand, 32990615 - 32990486
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| ||||  || || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  32990615 ccaagaatcgactagtccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 32990517  T
Q  138 ttaccaccaaagataatcgaacctaagactt 168  Q
    ||  ||| ||||  |||||||||| ||||||    
T  32990516 ttggcactaaagggaatcgaacctgagactt 32990486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 13771557 - 13771663
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    |||||||||||||||||| ||||||||||||| ||||||| |||  || || ||  |||||||  | |||| | |||| ||||||||| ||| ||| |||    
T  13771557 taaagccagagcatagcttcgtatggacttagcccaccgagattgacatcagagggaatcgaatttgagaccttgagatgagcaaacttcaagatcccaa 13771656  T
Q  196 gccaacc 202  Q
    |||||||    
T  13771657 gccaacc 13771663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 46714572 - 46714409
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    ||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     |||||| || ||| ||||| |||||||||||| ||||||||||    
T  46714572 caagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcaagggca-agctctgtatggacttagcccaccgaaat 46714474  T
Q  139 taccaccaaa-gataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |  ||||||| |  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  46714473 tggcaccaaagggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 46714409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 43719154 - 43719245
Alignment:
Q  111 gctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||| |||||||||||| |||||||||||| ||| | ||| |||||||||| | || |   || ||||||||||||| ||||||| ||||||    
T  43719154 gctctgtatggacttagcccaccgaaattagcactagagagaatcgaacctgaaacctctggaggagcaaactccaagatctcaaaccaacc 43719245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 1985939 - 1985853
Alignment:
Q  116 gtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||||||||||| ||| |||||||  ||||||||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  1985939 gtatggacttagcccatcgaaattcgcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 1985853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 13584329 - 13584434
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| |||||  ||||||||||| ||| |||||||  ||||| ||  |||||||| | ||||||   || ||||||||||||| ||||||     
T  13584329 taaagccagagca-agctctctatggacttagcccatcgaaattgacaccagagggaatcgaacttgagacttttggaggagcaaactccaatatctcag 13584427  T
Q  196 gccaacc 202  Q
    |||||||    
T  13584428 gccaacc 13584434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 32942492 - 32942387
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||| | ||||| |||||||||||| |||||||||||  || || ||| |||||||||| | || |   || ||| ||||||||| |||||||    
T  32942492 taaagccagagta-agctctgtatggacttagcccaccgaaattggcatcagagagaatcgaaccttaaacctctggaggagtaaactccaagatctcaa 32942394  T
Q  196 gccaacc 202  Q
    |||||||    
T  32942393 gccaacc 32942387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 49287961 - 49287875
Alignment:
Q  116 gtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||||||||||| |||||||||||  ||||| ||| |||||||||| |||| |   || ||||||||||||| ||| ||| ||||||    
T  49287961 gtatggacttagcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaacc 49287875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 18176904 - 18177067
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| ||||||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| ||||||||||||||||||||||    
T  18176904 ccaagaatcgactaatccgatgggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagtccaccgaaa 18177002  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| | || |   |||||||||||||||| |||||||| |||||    
T  18177003 ttggcaccagagggaatcgaacctgatacctctggaagagcaaactccaagatctcaagtcaacc 18177067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 15566517 - 15566679
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcggggctgagct-aaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    |||||||| |||| |||||| |||||||||| ||||||||||||||||||    | | |||||||||||| ||||| |||||||||||| ||||||||||    
T  15566517 ccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggcccgtttaaagccagagca-agctctgtatggacttagcccaccgaaat 15566615  T
Q  139 taccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |  ||| | ||  |||||||||| |||| |   || ||||||||||||| ||||||||||||||    
T  15566616 tggcactagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaacc 15566679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 30257804 - 30257641
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||  ||||||||||||||||||  |  |  ||||||||||||| ||||| |||||||||||||||| |||||    
T  30257804 ccaagaatcgactaatccgaggggaccaatgccaccgcccacttgcgggggccccatttaaagccagagca-agctctgtatggacttagtccatcgaaa 30257706  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||||||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  30257705 ttggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaacc 30257641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 53233928 - 53234090
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    ||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     || |||||||||| ||||| |||||||||||| ||||||||||    
T  53233928 caagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttagagccagagca-agctctgtatggacttagcccaccgaaat 53234026  T
Q  139 taccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |  ||||| ||| |||||||||| ||||||   || ||||||||||||| ||| ||||||||||    
T  53234027 tggcaccagagagaatcgaacctgagacttctggaggagcaaactccaagatcccaagccaacc 53234090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 26174293 - 26174130
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |  |  ||||||||||||| ||||| |||||||||||  |||||||||    
T  26174293 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctatttaaagccagagca-agctctgtatggacttaacccaccgaaa 26174195  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  26174194 ttggcaccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 26174130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 35493091 - 35492928
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  35493091 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 35492993  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  35492992 ttggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 35492928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 40133466 - 40133629
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||  || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  40133466 ccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 40133564  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||||||| ||||||||||    
T  40133565 ttgacaccagagggaatcgaacctgagacctttggaggagcaaactccaaaatcccaagccaacc 40133629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 201
Target Start/End: Original strand, 45272454 - 45272595
Alignment:
Q  61 gggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaa 158  Q
    |||||||||| ||||||||||||||||||  |     ||||||||||||| |||||||||||||||||| |||||||||||  ||||| ||  |||||||    
T  45272454 gggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctccgtatggacttagcccaccgaaattggcaccagagggaatcgaa 45272552  T
Q  159 cctaagacttggagaagagcaaactccaaaatctcaagccaac 201  Q
     || |||| |   || ||||||||||||| ||| |||||||||    
T  45272553 actgagacatctggaggagcaaactccaagatcccaagccaac 45272595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 52821653 - 52821815
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcggggctgagct-aaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    |||||||| |||| ||| || |||||||||| |||||||||||| ||||||   | | |||||||||||| ||||| ||||||||||||  |||||||||    
T  52821653 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttacggggccccgtttaaagccagagca-agctctgtatggacttagctcaccgaaat 52821751  T
Q  139 taccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| |||| |||||    
T  52821752 tggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaacc 52821815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 53424194 - 53424356
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcggggctgagct-aaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    |||||||| |||| ||| || |||||||||| |||||| |||||||||||    | | ||||||| |||| | ||| |||||||||||| ||||||||||    
T  53424194 ccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggcccgtttaaagccatagcaaa-ctctgtatggacttagcccaccgaaat 53424292  T
Q  139 taccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |  ||||||||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  53424293 tggcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 53424356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 26108414 - 26108309
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| |||    
T  26108414 taaagccagagca-agctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaa 26108316  T
Q  196 gccaacc 202  Q
    |||||||    
T  26108315 gccaacc 26108309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 30807228 - 30807333
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| |||    
T  30807228 taaagccagagca-agctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaa 30807326  T
Q  196 gccaacc 202  Q
    |||||||    
T  30807327 gccaacc 30807333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 40940947 - 40940842
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| |||    
T  40940947 taaagtcagagca-agctctgtatggacttagtccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaa 40940849  T
Q  196 gccaacc 202  Q
    |||||||    
T  40940848 gccaacc 40940842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 8456168 - 8456330
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    ||||||| |||| ||| || |||||||||| ||| ||||||||||||||  |     ||||||||||||| ||||| |||||||||||| ||||||||||    
T  8456168 caagaatcgactaatccgaggggaccaatcccactgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaat 8456266  T
Q  139 taccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |  ||||| ||  |||||||||| |||| |   || |||||||||| || ||| ||||||||||    
T  8456267 tggcaccagagggaatcgaacctgagacctctggaggagcaaactcgaagatcccaagccaacc 8456330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 202
Target Start/End: Original strand, 25289752 - 25289894
Alignment:
Q  61 gggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaa 158  Q
    |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||||  ||| | ||  |||||||    
T  25289752 gggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaattggcactagagggaatcgaa 25289850  T
Q  159 cctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||| |||| |   || ||||||||||||| ||| ||||||||||    
T  25289851 cctgagacctctggaggagcaaactccaagatcccaagccaacc 25289894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 45529772 - 45529934
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    ||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| ||| ||||||    
T  45529772 caagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagca-agctctgtatggacttagcccatcgaaat 45529870  T
Q  139 taccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |  | ||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  45529871 tggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 45529934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 49167159 - 49167073
Alignment:
Q  116 gtatggacttagtccaccgaaattaccaccaaagataatcgaacctaaga-cttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||||||||||||||||||||||||  ||||| ||| |||||||||| | | ||| | || ||||||||||||| ||||||||||||||    
T  49167159 gtatggacttagtccaccgaaattgacaccagagagaatcgaacctgatatctttg-gaggagcaaactccaagatctcaagccaacc 49167073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 46576470 - 46576365
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| ||||| |||||||||||| |||| ||||||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| |||    
T  46576470 taaagccagagca-agctctgtatggacttagcccactgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaa 46576372  T
Q  196 gccaacc 202  Q
    |||||||    
T  46576371 gccaacc 46576365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 139
Target Start/End: Complemental strand, 1693012 - 1692914
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    ||||||| |||| |||||| ||| | |||| ||||||||||||||||||  |||  |||||||||||||| || || |||| ||||||||||||||||||    
T  1693012 caagaatcgactaatctgagggggcaaatcccaccgcccacttgcgggggcctgt-ctaaagccagagca-agttctgtatagacttagtccaccgaaat 1692915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 49258279 - 49258442
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||| ||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  49258279 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 49258377  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||| | ||  |||||||||| |||| |   || ||||||||| ||| ||| ||||||||||    
T  49258378 ttggcactagagggaatcgaacctgagacctctggaggagcaaactgcaagatcccaagccaacc 49258442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 161
Target Start/End: Original strand, 8097296 - 8097418
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     |||||||||||||| |||| |||||||||||| ||| |||||    
T  8097296 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcat-gctctgtatggacttagcccatcgaaa 8097394  T
Q  138 ttaccaccaaagataatcgaacct 161  Q
    ||| ||| | ||  ||||||||||    
T  8097395 ttagcacaagagggaatcgaacct 8097418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 21363099 - 21362960
Alignment:
Q  64 accaatcacaccgcccacttgcgggg-ctgagct-aaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacct 161  Q
    ||||||| |||||||||||||||||| ||  | | |||||||||||| ||||| |||||||||||| | |||||||||  ||||| ||  ||||||||||    
T  21363099 accaatcccaccgcccacttgcgggggctccgtttaaagccagagca-agctctgtatggacttagcctaccgaaattgacaccagagggaatcgaacct 21363001  T
Q  162 aagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
     |||| |   || ||||||||||||| ||| |||| |||||    
T  21363000 gagacctctggaggagcaaactccaagatcccaagtcaacc 21362960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 39041927 - 39042027
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| ||||| | |||||||||| |||||||||||  ||||| ||| |||||||| | |||| |   || ||||||||||||| ||| |||    
T  39041927 taaagccagagca-agctctgcatggacttagcccaccgaaattggcaccagagagaatcgaacttgagacctctggaggagcaaactccaagatcccaa 39042025  T
Q  196 gc 197  Q
    ||    
T  39042026 gc 39042027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 53848451 - 53848500
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg 89  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||    
T  53848451 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggg 53848500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 14946902 - 14946796
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||  ||||| ||| |||||||||||| || | |||| ||||||||| ||| |||||||    
T  14946902 taaagctagagcatagctccgtatggacttagcccactgaaattgacaccagagaaaatcgaacctaaaaccttgagaggagcaaacttcaagatctcaa 14946803  T
Q  196 gccaacc 202  Q
    | |||||    
T  14946802 gtcaacc 14946796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 187
Target Start/End: Complemental strand, 15038139 - 15037991
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgc-ggggctgag-ctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| |||||| |||||||||| |||||||||||||| ||||||  |  |||||||| |||| ||||| |||||||||||| |||||||||    
T  15038139 ccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccaaagca-agctctgtatggacttagcccaccgaaa 15038041  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaa 187  Q
    ||  ||||||||  |||||||||| |||| |   || |||||||||||||    
T  15038040 ttggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaa 15037991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 44946070 - 44946233
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| || || |||||||||||| |||||||||    
T  44946070 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagca-agttctgtatggacttagcccaccgaaa 44946168  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||||||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  44946169 ttggcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 44946233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 30466847 - 30467010
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||| ||||||||||||||  | |   ||||||||||||| ||||| |||||||||||| |||||||||    
T  30466847 ccaagaatcgactaatccgaagggaccaatcccactgcccacttgcgggggcccggtttaaagccagagca-agctctgtatggacttagcccaccgaaa 30466945  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  || || ||| |||||||||| |||| |  ||| || |||||||||| ||| ||| ||||||    
T  30466946 ttggcagcagagagaatcgaacctgagacctctagaggaacaaactccaatatcccaaaccaacc 30467010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 27290710 - 27290605
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||  |||| |||  |||||||||| |||| |   || ||||||||||||| ||| |||    
T  27290710 taaagccagagca-agctctgtatggacttagcccaccgaaattggcaccgaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaa 27290612  T
Q  196 gccaacc 202  Q
    |||||||    
T  27290611 gccaacc 27290605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 34516431 - 34516536
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgc-ggggctgagctaaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    |||||||| |||| ||| || |||||||||| |||||||||||||| |||||     |||||| |||||| ||||| |||||||||||| ||||||||||    
T  34516431 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcaggggcccgtttaaagcgagagca-agctctgtatggacttagcccaccgaaat 34516529  T
Q  139 taccacc 145  Q
    |||||||    
T  34516530 taccacc 34516536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 202
Target Start/End: Complemental strand, 24196161 - 24196021
Alignment:
Q  61 gggaccaatcacaccgcccacttgcggggctgagctaaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacc 160  Q
    |||||||||| |||||||||||||||||||     ||||||||||||| || || |||||||||||| |||||||||||  ||||| ||  |||||||||    
T  24196161 gggaccaatcccaccgcccacttgcggggcccgtttaaagccagagca-agttctgtatggacttagcccaccgaaatttgcaccagagggaatcgaacc 24196063  T
Q  161 taagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    | | || |   || |||| ||| |||||||| ||||||||||    
T  24196062 tgaaacctctggaggagcgaaccccaaaatcccaagccaacc 24196021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 13266669 - 13266507
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcggggctgagct-aaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    |||||||| |||| || ||| |||||||||| ||   ||||||||||||||   | | |||||||||||| ||||| ||||||||||||||||||| |||    
T  13266669 ccaagaatcgactaatttgaggggaccaatcccattacccacttgcggggccccgtttaaagccagagca-agctctgtatggacttagtccaccggaat 13266571  T
Q  139 taccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |  ||||| ||  |||||||| | |||| |  | | ||||||| ||||| ||||||||||||||    
T  13266570 tggcaccagagtgaatcgaacatgagacctctaaaggagcaaattccaagatctcaagccaacc 13266507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 187
Target Start/End: Complemental strand, 17324944 - 17324798
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg-ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaatt 139  Q
    ||||||| |||| || ||| ||||| |||| ||||||||||||| |||| |  |  ||||||||||||| ||||| |||||||||||| |||||||||||    
T  17324944 caagaatcgactaatttgaggggactaatcccaccgcccacttgtgggggcccatttaaagccagagca-agctctgtatggacttagcccaccgaaatt 17324846  T
Q  140 accaccaaagataatcgaacctaagacttggagaagagcaaactccaa 187  Q
      ||||| ||  |||||||||| |||| |   || |||||||||||||    
T  17324845 ggcaccagagggaatcgaacctgagacctctggaggagcaaactccaa 17324798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 10582065 - 10582170
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    |||||| |||||| ||||| |||||||||||| |||||||||||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| |||    
T  10582065 taaagctagagca-agctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaa 10582163  T
Q  196 gccaacc 202  Q
    |||||||    
T  10582164 gccaacc 10582170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 11941227 - 11941390
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||  ||||| |||    
T  11941227 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagca-agctctgtatggacttaacccaccaaaa 11941325  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  ||| |||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  11941326 ttggcaccatagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 11941390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 139
Target Start/End: Complemental strand, 35171979 - 35171880
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    ||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| ||||||||||    
T  35171979 caagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaat 35171881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 202
Target Start/End: Complemental strand, 5394175 - 5394034
Alignment:
Q  62 ggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaac 159  Q
    ||||||||| |||||||||||||||| |  |  |  ||||| ||||||| | ||| |||||||||||| ||| |||||||  ||||| ||  ||||||||    
T  5394175 ggaccaatcccaccgcccacttgcggcggccccatttaaagtcagagcaaa-ctctgtatggacttagcccatcgaaattgacaccagagggaatcgaac 5394077  T
Q  160 ctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    || |||| |   || ||||||||||||| ||||||||||||||    
T  5394076 ctgagacctttggaggagcaaactccaagatctcaagccaacc 5394034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 40591290 - 40591201
Alignment:
Q  111 gctccgtatggacttagtccaccgaaattaccacca-aagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaac 201  Q
    |||| |||||||||| | ||||||||||| |||||| |||| |||| ||||| |||||| |||| ||||| ||||||| |||||||||||||    
T  40591290 gctctgtatggactt-gcccaccgaaattgccaccagaaga-aatcaaacctgagactttgagaggagcacactccaagatctcaagccaac 40591201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 33827648 - 33827753
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| ||||| |||||||||||| ||| |||||||  ||||| ||  |||||||||| |||| |   || |||||| |||||| ||| |||    
T  33827648 taaagccagagca-agctctgtatggacttagcccaacgaaattggcaccagagggaatcgaacctgagacctctggaggagcaatctccaagatcccaa 33827746  T
Q  196 gccaacc 202  Q
    |||||||    
T  33827747 gccaacc 33827753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 28194223 - 28194311
Alignment:
Q  111 gctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaa 200  Q
    |||| |||||||||| | |||||||||||  ||||| ||| ||||||||||||||| |  ||| ||||| ||||||| ||| ||||||||    
T  28194223 gctctgtatggactt-gcccaccgaaattggcaccagagagaatcgaacctaagaccttaagaggagcacactccaagatcccaagccaa 28194311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 8192428 - 8192531
Alignment:
Q  98 aagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagc 197  Q
    ||||||||||| |||||  ||||||||| | ||||||| |||  ||||| ||  |||||||||| |||| | |||| ||||| ||||||| ||| |||||    
T  8192428 aagccagagcaaagctctatatggactt-gcccaccgacattggcaccagagggaatcgaacctgagaccttgagaggagcacactccaagatcccaagc 8192526  T
Q  198 caacc 202  Q
    |||||    
T  8192527 caacc 8192531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 7175879 - 7176042
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg---ctgagctaaagccagagcatagctccgtatggacttagtccaccgaa 136  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||   |||   ||||||||||||| ||||| |||||||||||| ||||||||    
T  7175879 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcctgtt-taaagccagagca-agctctgtatggacttagcccaccgaa 7175976  T
Q  137 attaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  7175977 attggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 7176042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 7275461 - 7275298
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg---ctgagctaaagccagagcatagctccgtatggacttagtccaccgaa 136  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||   |||   ||||||||||||| ||||| |||||||||||| ||||||||    
T  7275461 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtt-taaagccagagca-agctctgtatggacttagcccaccgaa 7275364  T
Q  137 attaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  7275363 attggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 7275298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 22120072 - 22119909
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  22120072 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 22119974  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  22119973 ttggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 22119909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 40542927 - 40543090
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  40542927 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 40543025  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  40543026 ttggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 40543090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 27704184 - 27704023
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcggggct-gagctaaagccagagcatagctccgtatggacttagtccaccgaaatt 139  Q
    ||||||| |||| |||||| |||| |||||||||| ||||||||||||| |  |  |||||||| |||| |||||  ||||||||||| |||||||||||    
T  27704184 caagaatcgactaatctgaggggatcaatcacaccacccacttgcgggggtccatttaaagccaaagca-agctctctatggacttagcccaccgaaatt 27704086  T
Q  140 accaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
      ||||||||  |||||||||| |||| |    | ||||||||| ||| ||||||||||||||    
T  27704085 ggcaccaaaggaaatcgaacctgagacctctgtaggagcaaacttcaagatctcaagccaacc 27704023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 2751455 - 2751292
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||| ||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  2751455 ccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 2751357  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  2751356 ttggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaacc 2751292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 21835335 - 21835172
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  21835335 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 21835237  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||  |   || ||||||||||||| ||| ||||||||||    
T  21835236 ttggcaccagagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaacc 21835172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 202
Target Start/End: Complemental strand, 2103218 - 2103076
Alignment:
Q  61 gggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaa 158  Q
    |||||||||| ||||||||||||||||||  |  |  ||||||||||||| ||||| |||||||||||| |||||||||||  | ||| ||  |||||||    
T  2103218 gggaccaatcccaccgcccacttgcgggggccccatttaaagccagagca-agctctgtatggacttagcccaccgaaattggctccagagggaatcgaa 2103120  T
Q  159 cctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||| |||| |   || ||||||||||||| ||| ||||||||||    
T  2103119 cctgagacctctggaggagcaaactccaagatcccaagccaacc 2103076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 10091371 - 10091209
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    ||||||| |||| ||| || |||| ||||| ||||||||||||||||||  |  |  ||||||||||||| ||||| |||||||||||| ||||||||||    
T  10091371 caagaatcgactaatccgaggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagca-agctctgtatggacttagcccaccgaaat 10091273  T
Q  139 taccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |  | ||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  10091272 tggctccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 10091209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 11998033 - 11997870
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg-ctgagct-aaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||  || |||||||||| |||||||||||||||||| |  || | |||||||||||| ||||  |||||||||||| | |||||||    
T  11998033 ccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggcccagtttaaagccagagca-agctatgtatggacttagccaaccgaaa 11997935  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |  ||| ||||||||||||| ||| ||||||||||    
T  11997934 ttggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaacc 11997870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 22703668 - 22703507
Alignment:
Q  42 aagaatggactgatctgatgggaccaatcacaccgcccacttgcggggctgagct--aaagccagagcatagctccgtatggacttagtccaccgaaatt 139  Q
    |||||| |||| ||| || |||||||||| |||||||||||||||||| |    |  |||||||||||| ||||  |||||||||||| |||||||||||    
T  22703668 aagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagca-agctttgtatggacttagcccaccgaaatt 22703570  T
Q  140 accaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
      ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  22703569 gacaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 22703507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 654722 - 654848
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcggggctgagct-aaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    |||||||  |||| ||| || |||||||||| ||||||||||||||||||    | | |||||||||||| ||||| |||||||||||| ||||||||||    
T  654722 ccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcgggggcccgtttaaagccagagca-agctctgtatggacttagcccaccgaaat 654820  T
Q  139 taccaccaaagataatcgaacctaagac 166  Q
    |  ||||| ||  |||||||||| ||||    
T  654821 tggcaccagagggaatcgaacctgagac 654848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 28090003 - 28089837
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg-ctgagctaaagccagagcatagctcc----gtatggacttagtccaccg 134  Q
    |||||||| |||| ||| || |||||||||| || ||||||||||||||| |  |  ||||||||||||| |||||     |||||||||||| ||||||    
T  28090003 ccaagaatcgactaatccgaggggaccaatctcatcgcccacttgcgggggcccatttaaagccagagca-agctcactttgtatggacttagcccaccg 28089905  T
Q  135 aaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||||  ||||| ||   ||||||||| |||| |   || ||||||||||||| ||||||||||||||    
T  28089904 aaattgacaccagagggtatcgaacctgagacatctggaggagcaaactccaagatctcaagccaacc 28089837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 42814971 - 42814885
Alignment:
Q  116 gtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||||||||||| |||||||||||  ||||| ||  |||||||||| ||||||  ||| ||||||||||||| ||| |||| |||||    
T  42814971 gtatggacttagcccaccgaaattgacaccagagggaatcgaacctgagacttcaagaggagcaaactccaagatcccaagtcaacc 42814885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 27312336 - 27312287
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg 89  Q
    |||||||| |||| |||||| |||||||||| ||||||||||||||||||    
T  27312336 ccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggg 27312287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 17212177 - 17212074
Alignment:
Q  98 aagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagc 197  Q
    ||||||||||| | ||| |||||||||||| |||||||||||  ||||| ||| ||| |||||| |||| |   || ||||||||||||| ||| |||||    
T  17212177 aagccagagca-atctctgtatggacttagcccaccgaaattggcaccagagagaattgaacctgagacctctggaggagcaaactccaagatcccaagc 17212079  T
Q  198 caacc 202  Q
    |||||    
T  17212078 caacc 17212074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 202
Target Start/End: Original strand, 23012546 - 23012688
Alignment:
Q  61 gggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaa 158  Q
    |||||||||| ||||||||||||| ||||  |  |  ||||||||||||| ||||| |||||||||||| |||||||||||  ||| | ||  |||| ||    
T  23012546 gggaccaatcccaccgcccacttgtgggggccccatttaaagccagagca-agctctgtatggacttagcccaccgaaattggcactagagggaatcaaa 23012644  T
Q  159 cctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||||||| |   ||  |||||||||||| ||| ||||||||||    
T  23012645 cctaagacctctggagaagcaaactccaagatcccaagccaacc 23012688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 19421357 - 19421252
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccacca-aagataatcgaacctaagacttggagaagagcaaactccaaaatctca 194  Q
    ||||| ||||||| ||||| |||||||||||| ||| |||||||  ||||| |||| |||||||||| |||| |  ||| ||||||||||||| ||| ||    
T  19421357 taaagtcagagca-agctctgtatggacttagcccatcgaaattgacaccagaaga-aatcgaacctgagacctctagaggagcaaactccaagatccca 19421260  T
Q  195 agccaacc 202  Q
    ||||||||    
T  19421259 agccaacc 19421252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 9718062 - 9718167
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| |||||  ||||||||||| ||| |||||||  ||||| ||  |||||||| | ||||||   || ||||||||||||| ||||||     
T  9718062 taaagccagagca-agctctctatggacttagcccatcgaaattgacaccagagggaatcgaacttgagacttttggaggagcaaactccaatatctcag 9718160  T
Q  196 gccaacc 202  Q
    |||||||    
T  9718161 gccaacc 9718167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 21217908 - 21218013
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    |||||| |||||| ||||| |||||||||||| |||||||||||  || || ||  |||||||||| |||| |   || ||||||||||||| ||| |||    
T  21217908 taaagctagagca-agctctgtatggacttagcccaccgaaattggcatcagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaa 21218006  T
Q  196 gccaacc 202  Q
    |||||||    
T  21218007 gccaacc 21218013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 42913588 - 42913693
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| || ||||||||||||||  ||| |||||||  ||||| |   |||||||||| |||| |  ||| ||||||||||||| ||| |||    
T  42913588 taaagccagagca-agttccgtatggacttatcccatcgaaattggcaccatatgaaatcgaacctgagacctctagaggagcaaactccaagatcccaa 42913686  T
Q  196 gccaacc 202  Q
    |||||||    
T  42913687 gccaacc 42913693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 47380969 - 47380919
Alignment:
Q  152 aatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||||||||||| |  | |||||||||||||| ||||||||||||||||||    
T  47380969 aatcgaacctaaaatcttgagaagagcaaactacaaaatctcaagccaacc 47380919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 31197774 - 31197725
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg 89  Q
    |||||||| |||| |||||| |||||||||| ||||| ||||||||||||    
T  31197774 ccaagaatcgactaatctgaggggaccaatcccaccgaccacttgcgggg 31197725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 89
Target Start/End: Original strand, 8943439 - 8943467
Alignment:
Q  61 gggaccaatcacaccgcccacttgcgggg 89  Q
    |||||||||||||||||||||||||||||    
T  8943439 gggaccaatcacaccgcccacttgcgggg 8943467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 202
Target Start/End: Original strand, 23330816 - 23330919
Alignment:
Q  98 aagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagc 197  Q
    ||||||||||| ||||| |||||||||| | |||||||||||  ||||  ||  | |||||||| |||| | |||| ||||| |||| |||||| |||||    
T  23330816 aagccagagcaaagctctgtatggactt-gcccaccgaaattggcaccggagggagtcgaacctgagaccttgagaggagcacactctaaaatcccaagc 23330914  T
Q  198 caacc 202  Q
    |||||    
T  23330915 caacc 23330919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 202
Target Start/End: Complemental strand, 8077806 - 8077664
Alignment:
Q  61 gggaccaatcacaccgcccacttgcgggg---ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcga 157  Q
    |||||||||| ||||||||||||||||||   |||   ||||||||||||| ||||| |||||||||||| |||||||||||  ||||| ||| ||||||    
T  8077806 gggaccaatcccaccgcccacttgcgggggccctgtt-taaagccagagca-agctctgtatggacttagcccaccgaaattggcaccagagagaatcga 8077709  T
Q  158 acctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||| |||| |   || ||||||||||||| ||| ||||||||||    
T  8077708 acctgagacctctggaggagcaaactccaagatcccaagccaacc 8077664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 4621254 - 4621417
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  4621254 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 4621352  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  4621353 ttggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 4621417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 15059419 - 15059582
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||  || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  15059419 ccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcggggaccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 15059517  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||| |||||||||| |||| |   || ||||||||||||| ||  ||||||||||    
T  15059518 ttggcaccagagagaatcgaacctgagacctctggaggagcaaactccaagattccaagccaacc 15059582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 24674573 - 24674410
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||  || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  24674573 ccaagaatcgactaatacgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 24674475  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  24674474 ttggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 24674410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 1138695 - 1138596
Alignment:
Q  102 cagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaac 201  Q
    ||||||| ||||| |||||||||| |||||||||||||  ||| | ||| | ||||||||||||| | |||| ||||| ||||||| |||||||||||||    
T  1138695 cagagcaaagctctgtatggactt-gtccaccgaaattggcactagagagattcgaacctaagaccttgagaggagcacactccaagatctcaagccaac 1138597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 7766745 - 7766907
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaat 138  Q
    ||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||| ||||||| ||||| |||||||||||| ||||||||||    
T  7766745 caagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagtcagagca-agctctgtatggacttagcccaccgaaat 7766843  T
Q  139 taccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    || ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||| ||||    
T  7766844 tagcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagctaacc 7766907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 24122203 - 24122040
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcggg-gctgagct-aaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||| ||   | | |||||||||||| ||||| |||||||||||| |||||||||    
T  24122203 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 24122105  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || |||||||| |||| ||| ||||||||||    
T  24122104 ttggcaccagagggaatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaacc 24122040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 202
Target Start/End: Complemental strand, 32729703 - 32729562
Alignment:
Q  61 gggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaa 158  Q
    |||| ||||| ||||||||||||||||||  |  |  ||||||||||||| ||||| |||||||||| | |||||||||||  ||||| ||  |||||||    
T  32729703 gggatcaatcccaccgcccacttgcggggaccccatttaaagccagagca-agctctgtatggactt-gcccaccgaaattggcaccatagggaatcgaa 32729606  T
Q  159 cctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||| |||||| |||| |||||||||| || ||| ||||||||||    
T  32729605 cctgagactttgagaggagcaaactcgaagatcccaagccaacc 32729562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 200
Target Start/End: Original strand, 9500372 - 9500533
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg-ctgagct-aaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || | |||||||| ||||||||||||| |||| ||  | | |||||||||||| ||||| |||||||||||| |||||||||    
T  9500372 ccaagaatcgactaatccgaagagaccaatctcaccgcccacttgtgggggctccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 9500470  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaa 200  Q
    ||  ||||| ||| |||||||||| |||| |    | ||||||||||||| ||| ||||||||    
T  9500471 ttggcaccagagagaatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaa 9500533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 1379075 - 1378915
Alignment:
Q  42 aagaatggactgatctgatgggaccaatcacaccgcccacttgcggggctgagct-aaagccagagcatagctccgtatggacttagtccaccgaaatta 140  Q
    |||||| |||| |||||| |||||||||| ||||| ||||||||||||    | | |||||||||||| || || |||||||||||| |||||||||||     
T  1379075 aagaatcgactaatctgaggggaccaatctcaccgtccacttgcgggggcccgtttaaagccagagca-agttctgtatggacttagcccaccgaaattg 1378977  T
Q  141 ccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
     ||||| ||  |||||||| | ||||||   || ||||||||||||| ||| |||| |||||    
T  1378976 acaccagaggaaatcgaacatgagacttttggaggagcaaactccaagatcccaagtcaacc 1378915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 30677356 - 30677256
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||  |||| |||||| |||||||||| ||||||||||||||||||  |  |  |||||||| |||| ||||| |||||||||||| |||||||||    
T  30677356 ccaagaaccgactaatctgaggggaccaatcccaccgcccacttgcgggggtcccatttaaagccaaagca-agctctgtatggacttagcccaccgaaa 30677258  T
Q  138 tt 139  Q
    ||    
T  30677257 tt 30677256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 210
Target Start/End: Original strand, 45859137 - 45859230
Alignment:
Q  116 gtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacctccaaatg 210  Q
    |||||||||||| |||||||||||  ||||| ||  |||||||||| |||| |  ||| ||||||||||||| ||| |||||||| |||||||||    
T  45859137 gtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaa-ctccaaatg 45859230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 27454881 - 27455046
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcggggctgagc----taaagccagagcatagctccgtatggacttagtccaccga 135  Q
    |||||||| |||| ||| || |||||||||| |||||||||| |||||||  |  |    ||||||||||||| ||||| ||||||||||||  ||||||    
T  27454881 ccaagaatcgactaatccgaggggaccaatcccaccgcccacatgcggggggggcccgtttaaagccagagca-agctctgtatggacttagctcaccga 27454979  T
Q  136 aattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||||  || || ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  27454980 aattggcatcagagtgaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 27455046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 12993998 - 12993946
Alignment:
Q  124 ttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaaga 176  Q
    |||||||||| |||||| ||||| |||||||||||||| |||||| |||||||    
T  12993998 ttagtccaccaaaattagcaccagagataatcgaacctgagactttgagaaga 12993946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 8254827 - 8254896
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagac 166  Q
    ||||||||||||| || || ||||| |||||| |||||||||||  ||||| |||||||||||||| ||||    
T  8254827 taaagccagagca-agttctgtatgaacttagcccaccgaaattgacaccagagataatcgaacctgagac 8254896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 46607932 - 46607827
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||| ||||||| ||||| |||||||||||| |||||||||||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| |||    
T  46607932 taaagtcagagca-agctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaa 46607834  T
Q  196 gccaacc 202  Q
    | |||||    
T  46607833 gtcaacc 46607827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 24217068 - 24216995
Alignment:
Q  129 ccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||||||||||  |||||||| ||||||||||| |||| | |||| ||||| ||||||| ||| |||| |||||    
T  24217068 ccaccgaaattggcaccaaaggtaatcgaacctgagaccttgagaggagcacactccaagatcccaagtcaacc 24216995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 23734296 - 23734248
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg 89  Q
    ||||||| |||| |||||| |||||||||  ||||||||||||||||||    
T  23734296 caagaatcgactaatctgaggggaccaatttcaccgcccacttgcgggg 23734248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 23741488 - 23741440
Alignment:
Q  41 caagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg 89  Q
    ||||||| |||| |||||| |||||||||  ||||||||||||||||||    
T  23741488 caagaatcgactaatctgaggggaccaatttcaccgcccacttgcgggg 23741440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 2618370 - 2618207
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg-ctgagct-aaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| |||||||||||||||||| ||  | | |||||||||||| ||||| |||||||||||| |||| ||||    
T  2618370 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccagagca-agctctgtatggacttagcccactgaaa 2618272  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  ||||||||| ||||| |   || ||||||||||||| ||| ||||||||||    
T  2618271 ttggcaccagagggaatcgaacccaagacctctggaggagcaaactccaagatcccaagccaacc 2618207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 4718829 - 4718666
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  4718829 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 4718731  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |    | ||||||||||||| ||| ||||||||||    
T  4718730 ttggcaccagagggaatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaacc 4718666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 34237672 - 34237835
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| |||||| |||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  34237672 ccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 34237770  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  34237771 ttggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 34237835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 39349440 - 39349277
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||| ||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  39349440 ccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 39349342  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  39349341 ttggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 39349277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 3734698 - 3734803
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| |||    
T  3734698 taaagccagagca-agctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaa 3734796  T
Q  196 gccaacc 202  Q
    |||||||    
T  3734797 gccaacc 3734803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 27746410 - 27746515
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||  ||||||||  |||||||||| |||| |   || ||||||||||||| ||| |||    
T  27746410 taaagccagagca-agctctgtatggacttagcccaccgaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccaa 27746508  T
Q  196 gccaacc 202  Q
     ||||||    
T  27746509 accaacc 27746515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 21603414 - 21603251
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||| ||||| |||||||||    
T  21603414 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatgggcttagcccaccgaaa 21603316  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || |||||||||| || ||| ||||||||||    
T  21603315 ttggcaccatagggaatcgaacctgagacctctggaggagcaaactctaagatcccaagccaacc 21603251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 28193658 - 28193495
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgc-ggggctgagct-aaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| |||||||||||||  |||||   | | |||||||||||| ||||| |||||||||||  |||||||||    
T  28193658 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtaggggccccgtttaaagccagagca-agctctgtatggacttaacccaccgaaa 28193560  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  28193559 ttggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 28193495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 127
Target Start/End: Complemental strand, 2166871 - 2166793
Alignment:
Q  49 gactgatctgatgggaccaatcacaccgcccacttgcgggg-ctgagctaaagccagagcatagctccgtatggacttag 127  Q
    |||| |||||| |||||||||| |||||||||||||||||| || |  ||||||||||||| ||||| ||||||||||||    
T  2166871 gactaatctgaggggaccaatcccaccgcccacttgcggggtcttatttaaagccagagca-agctctgtatggacttag 2166793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 200
Target Start/End: Original strand, 8765543 - 8765704
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcggg-gctgag-ctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||| ||   |  ||||||||||||| ||||| |||||||||||| ||| |||||    
T  8765543 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagca-agctctgtatggacttagcccatcgaaa 8765641  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaa 200  Q
    ||  ||||| ||  |||||||||| |||  |   |  ||||||||||||| ||||||||||||    
T  8765642 ttggcaccagagggaatcgaacctgagatctctgggggagcaaactccaagatctcaagccaa 8765704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 14633079 - 14632975
Alignment:
Q  97 aaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaag 196  Q
    |||||||||||| ||||| |||| ||||||| |||||||||||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||    
T  14633079 aaagccagagca-agctctgtatagacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaag 14632981  T
Q  197 ccaacc 202  Q
    ||||||    
T  14632980 ccaacc 14632975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 15259423 - 15259550
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||  || ||||||||| |||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  15259423 ccaagaatcgactaattcgaggggaccaattacaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 15259521  T
Q  138 ttaccaccaaagataatcgaacctaagac 166  Q
    ||  ||||| ||  |||||||||| ||||    
T  15259522 ttggcaccagagggaatcgaacctgagac 15259550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 21667676 - 21667612
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacct 161  Q
    ||||| ||||||| ||||| |||||||||||| |||||||||||| ||||||||  ||||||||||    
T  21667676 taaaggcagagca-agctctgtatggacttagcccaccgaaattagcaccaaaggaaatcgaacct 21667612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 6953025 - 6953151
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg---ctgagctaaagccagagcatagctccgtatggacttagtccaccgaa 136  Q
    |||||||| |||| ||| || |||||||||| ||||||| ||||||||||   |||   ||||||||||||| ||||| |||||||||||| ||||||||    
T  6953025 ccaagaatcgactaatccga-gggaccaatcccaccgccaacttgcgggggccctgtt-taaagccagagca-agctctgtatggacttagcccaccgaa 6953121  T
Q  137 attaccaccaaagataatcgaacctaagac 166  Q
    |||  ||||| ||  |||||||||| ||||    
T  6953122 attggcaccagagggaatcgaacctgagac 6953151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 28964159 - 28964117
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaatt 139  Q
    |||||||||| ||||||||||||||||||||| |||||||||||    
T  28964159 taaagccaga-catagctccgtatggacttagcccaccgaaatt 28964117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 36848839 - 36848929
Alignment:
Q  112 ctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||||||||||||||| |||||||||||  ||||| ||  ||| ||| |||| || | |||| ||||||||||||||| | |||| |||||    
T  36848839 ctccgtatggacttagcccaccgaaattggcaccagaggaaatggaatctaaaaccttgagaggagcaaactccaaaaacccaagtcaacc 36848929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 2639428 - 2639477
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg 89  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||    
T  2639428 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggg 2639477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 200
Target Start/End: Complemental strand, 161989 - 161828
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |  |   |||||||||||| ||||| |||||||||||| |||||||||    
T  161989 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccattaaaagccagagca-agctctgtatggacttagcccaccgaaa 161891  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaa 200  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||    
T  161890 ttggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaa 161828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 5099 - 5262
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||| ||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  5099 ccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 5197  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||  ||||| ||  |||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  5198 ttggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaacc 5262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 202
Target Start/End: Original strand, 1094 - 1236
Alignment:
Q  61 gggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaa 158  Q
    |||||||||| ||||| ||||||||||||  |  |  ||||||||||||| ||||| |||||||||||| |||||||||||  | ||| ||  |||||||    
T  1094 gggaccaatcccaccgtccacttgcgggggccccatttaaagccagagca-agctctgtatggacttagcccaccgaaattggctccagagggaatcgaa 1192  T
Q  159 cctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||| |||| |   || ||||||||||||| ||| ||||||||||    
T  1193 cctgagacctctggaggagcaaactccaagatcccaagccaacc 1236  T

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Target: scaffold0366 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 202
Target Start/End: Original strand, 9337 - 9479
Alignment:
Q  61 gggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaa 158  Q
    |||||||||| ||||| ||||||||||||  |  |  ||||||||||||| ||||| |||||||||||| |||||||||||  | ||| ||  |||||||    
T  9337 gggaccaatcccaccgtccacttgcgggggccccatttaaagccagagca-agctctgtatggacttagcccaccgaaattggctccagagggaatcgaa 9435  T
Q  159 cctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||| |||| |   || ||||||||||||| ||| ||||||||||    
T  9436 cctgagacctctggaggagcaaactccaagatcccaagccaacc 9479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 12075 - 12180
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||  | ||| ||  |||||||||| |||| |   || ||||||||||||| ||| |||    
T  12075 taaagccagagca-agctctgtatggacttagcccaccgaaattggctccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaa 12173  T
Q  196 gccaacc 202  Q
    |||||||    
T  12174 gccaacc 12180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 10768 - 10873
Alignment:
Q  96 taaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaa 195  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||  | ||| ||  |||||||||| |||| |   || ||||||||||||| ||| |||    
T  10768 taaagccagagca-agctctgtatggacttagcccaccgaaattggctccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaa 10866  T
Q  196 gccaacc 202  Q
    |||||||    
T  10867 gccaacc 10873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 40504 - 40378
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||||| ||||| |||||||||||| |||||||||    
T  40504 ccaagaatcgactaatccga-gggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagca-agctctgtatggacttagcccaccgaaa 40407  T
Q  138 ttaccaccaaagataatcgaacctaagac 166  Q
    ||  ||||| ||  |||||||||| ||||    
T  40406 ttggcaccagagggaatcgaacctgagac 40378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 27890 - 27793
Alignment:
Q  105 agcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    ||||||||| ||||||||||||| ||||  |||||  ||||| ||  |||||||||  |||| | |||| ||||||||||||||||| ||| ||||||    
T  27890 agcatagcttcgtatggacttagcccactcaaattggcaccacagggaatcgaacccgagaccttgagaggagcaaactccaaaatcccaaaccaacc 27793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 201
Target Start/End: Original strand, 7326 - 7488
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg--ctgagctaaagccagagcatagctccgtatggacttagtccaccgaaa 137  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||  |     ||||||||||| | ||||| |||||||||||| |||||||||    
T  7326 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagag-aaagctctgtatggacttagcccaccgaaa 7424  T
Q  138 ttaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaac 201  Q
    ||  ||||  ||  |||||||||| |||  |   || ||||||||||||| ||| |||||||||    
T  7425 ttggcaccggagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaac 7488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 202
Target Start/End: Original strand, 97405 - 97546
Alignment:
Q  62 ggaccaatcacaccgcccacttgcggggctgagct--aaagccagagcatagctccgtatggacttagtccaccgaaattaccaccaaagataatcgaac 159  Q
    ||||||||| |||||||||||||||||| |    |  |||| ||||||| ||||| |||||||||||| |||||||||||  ||||| ||  ||||||||    
T  97405 ggaccaatcccaccgcccacttgcgggggtcccgtttaaagtcagagca-agctctgtatggacttagcccaccgaaattggcaccagagggaatcgaac 97503  T
Q  160 ctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    || |||| |   || ||||||||| ||| ||| ||||||||||    
T  97504 ctgagacctttggaggagcaaactacaagatcccaagccaacc 97546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 8514 - 8587
Alignment:
Q  129 ccaccgaaattaccaccaaagataatcgaacctaagacttggagaagagcaaactccaaaatctcaagccaacc 202  Q
    |||||||||||  ||||| |||||||||||||| |||| |   || ||||||||||||| ||| ||||||||||    
T  8514 ccaccgaaattggcaccagagataatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 8587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 39272 - 39223
Alignment:
Q  40 ccaagaatggactgatctgatgggaccaatcacaccgcccacttgcgggg 89  Q
    |||||||| |||| ||| || |||||||||| ||||||||||||||||||    
T  39272 ccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggg 39223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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