View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9612A_low_148 (Length: 249)

Name: NF9612A_low_148
Description: NF9612A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9612A_low_148
NF9612A_low_148
[»] chr2 (32 HSPs)
chr2 (13-129)||(41569469-41569586)
chr2 (166-249)||(433918-434001)
chr2 (159-249)||(18177001-18177091)
chr2 (159-248)||(41569317-41569406)
chr2 (159-226)||(37257511-37257578)
chr2 (159-238)||(42223883-42223962)
chr2 (158-233)||(4952416-4952491)
chr2 (175-249)||(670392-670466)
chr2 (164-248)||(29051576-29051658)
chr2 (168-241)||(7552625-7552700)
chr2 (158-223)||(4758585-4758650)
chr2 (164-249)||(26738801-26738885)
chr2 (15-68)||(41588523-41588576)
chr2 (159-226)||(42678810-42678878)
chr2 (164-226)||(2464193-2464254)
chr2 (191-249)||(17779475-17779533)
chr2 (159-223)||(29879903-29879967)
chr2 (159-226)||(10711785-10711852)
chr2 (167-206)||(13711329-13711368)
chr2 (159-226)||(31389608-31389675)
chr2 (159-218)||(35705555-35705614)
chr2 (168-218)||(4753231-4753281)
chr2 (175-233)||(5027233-5027291)
chr2 (168-218)||(28679387-28679437)
chr2 (164-226)||(32869892-32869954)
chr2 (168-249)||(11384935-11385016)
chr2 (167-232)||(20911870-20911935)
chr2 (166-218)||(6941011-6941063)
chr2 (159-223)||(6999014-6999078)
chr2 (167-203)||(18876887-18876923)
chr2 (159-203)||(28245789-28245833)
chr2 (159-191)||(36802957-36802989)
[»] chr3 (34 HSPs)
chr3 (159-249)||(390870-390960)
chr3 (159-241)||(39020087-39020169)
chr3 (159-249)||(32767737-32767827)
chr3 (159-249)||(37508418-37508508)
chr3 (159-249)||(44677404-44677494)
chr3 (158-249)||(30909089-30909180)
chr3 (159-249)||(10206893-10206983)
chr3 (167-249)||(54773673-54773755)
chr3 (164-249)||(28419134-28419219)
chr3 (159-248)||(43905034-43905123)
chr3 (159-226)||(8821691-8821758)
chr3 (159-249)||(39671017-39671107)
chr3 (159-241)||(49363179-49363261)
chr3 (164-226)||(54028008-54028070)
chr3 (167-249)||(54195409-54195491)
chr3 (158-241)||(11633673-11633756)
chr3 (159-226)||(33375921-33375988)
chr3 (158-241)||(55013063-55013145)
chr3 (164-241)||(22371257-22371334)
chr3 (159-249)||(36121882-36121972)
chr3 (164-241)||(29634000-29634077)
chr3 (159-243)||(39907472-39907556)
chr3 (167-206)||(37035488-37035527)
chr3 (164-219)||(46984582-46984637)
chr3 (159-218)||(49417636-49417695)
chr3 (168-217)||(21195842-21195891)
chr3 (159-219)||(26996377-26996435)
chr3 (172-241)||(46982831-46982900)
chr3 (177-249)||(35201460-35201531)
chr3 (167-206)||(23770708-23770747)
chr3 (168-218)||(9753409-9753459)
chr3 (166-203)||(50638317-50638354)
chr3 (166-202)||(37927172-37927208)
chr3 (159-223)||(55400060-55400124)
[»] chr5 (22 HSPs)
chr5 (159-248)||(5042309-5042398)
chr5 (159-249)||(35098925-35099015)
chr5 (164-226)||(33620674-33620736)
chr5 (164-241)||(2688914-2688991)
chr5 (166-249)||(4430856-4430939)
chr5 (159-238)||(6930990-6931069)
chr5 (159-249)||(8267740-8267830)
chr5 (159-232)||(18842258-18842331)
chr5 (164-226)||(15267850-15267912)
chr5 (167-241)||(16437492-16437566)
chr5 (159-249)||(21064146-21064236)
chr5 (164-219)||(5821562-5821617)
chr5 (167-249)||(23126261-23126342)
chr5 (168-249)||(39088789-39088869)
chr5 (159-218)||(37700521-37700580)
chr5 (159-249)||(20770192-20770282)
chr5 (165-226)||(41724256-41724317)
chr5 (159-226)||(43441799-43441866)
chr5 (168-206)||(17402884-17402922)
chr5 (172-249)||(2224866-2224942)
chr5 (168-249)||(42267416-42267496)
chr5 (159-203)||(9581640-9581684)
[»] chr4 (35 HSPs)
chr4 (167-248)||(42959341-42959422)
chr4 (167-249)||(36111315-36111397)
chr4 (159-249)||(41486063-41486153)
chr4 (164-249)||(12112693-12112778)
chr4 (158-249)||(26206897-26206988)
chr4 (159-249)||(14451454-14451544)
chr4 (159-249)||(51746281-51746371)
chr4 (159-248)||(30079907-30079996)
chr4 (164-248)||(25317987-25318070)
chr4 (170-241)||(6141706-6141777)
chr4 (166-249)||(31076122-31076204)
chr4 (159-249)||(9118784-9118874)
chr4 (167-249)||(17475946-17476027)
chr4 (159-241)||(21260359-21260441)
chr4 (159-249)||(33899246-33899336)
chr4 (159-249)||(41082379-41082468)
chr4 (168-249)||(51194339-51194420)
chr4 (168-241)||(48536366-48536441)
chr4 (159-226)||(624255-624322)
chr4 (159-249)||(5932078-5932167)
chr4 (179-249)||(50272993-50273063)
chr4 (164-249)||(53152241-53152326)
chr4 (168-248)||(35820241-35820321)
chr4 (164-249)||(54669504-54669588)
chr4 (159-249)||(47965800-47965888)
chr4 (159-226)||(49896609-49896676)
chr4 (159-249)||(28458297-28458387)
chr4 (166-218)||(2256281-2256333)
chr4 (159-203)||(28657407-28657451)
chr4 (159-239)||(39344910-39344990)
chr4 (159-198)||(30169991-30170030)
chr4 (159-218)||(37066049-37066108)
chr4 (164-206)||(6494856-6494898)
chr4 (159-188)||(13263378-13263407)
chr4 (158-198)||(2999172-2999212)
[»] chr7 (29 HSPs)
chr7 (159-249)||(29162896-29162986)
chr7 (159-249)||(32815229-32815319)
chr7 (168-249)||(13162989-13163070)
chr7 (159-249)||(38779664-38779754)
chr7 (159-249)||(39231648-39231738)
chr7 (159-232)||(40353325-40353398)
chr7 (158-241)||(21023045-21023128)
chr7 (167-241)||(13906385-13906459)
chr7 (159-249)||(19785999-19786089)
chr7 (164-241)||(37808692-37808769)
chr7 (159-232)||(39332046-39332119)
chr7 (167-249)||(41402577-41402659)
chr7 (168-249)||(26041240-26041320)
chr7 (159-203)||(47078217-47078261)
chr7 (168-226)||(21822542-21822600)
chr7 (159-241)||(41666850-41666932)
chr7 (158-239)||(35588821-35588902)
chr7 (172-225)||(41026132-41026185)
chr7 (159-246)||(29002669-29002754)
chr7 (159-226)||(13729787-13729854)
chr7 (159-226)||(28036805-28036872)
chr7 (167-206)||(35600741-35600780)
chr7 (159-226)||(39137213-39137280)
chr7 (159-249)||(39823870-39823959)
chr7 (159-188)||(20482588-20482617)
chr7 (168-249)||(36019486-36019567)
chr7 (158-223)||(43573489-43573554)
chr7 (167-216)||(46653040-46653089)
chr7 (185-249)||(46773584-46773648)
[»] chr1 (39 HSPs)
chr1 (159-241)||(46082049-46082131)
chr1 (170-249)||(20565038-20565117)
chr1 (164-249)||(3024670-3024755)
chr1 (164-248)||(38303609-38303693)
chr1 (158-249)||(4514374-4514465)
chr1 (158-249)||(7128178-7128269)
chr1 (159-249)||(756917-757007)
chr1 (159-249)||(1852871-1852961)
chr1 (159-249)||(3603172-3603262)
chr1 (159-249)||(26585799-26585889)
chr1 (159-249)||(26837513-26837603)
chr1 (159-249)||(33024491-33024581)
chr1 (168-241)||(36779197-36779270)
chr1 (159-246)||(902699-902786)
chr1 (159-249)||(8411638-8411728)
chr1 (164-248)||(36673653-36673736)
chr1 (159-249)||(9008286-9008376)
chr1 (159-249)||(16986999-16987088)
chr1 (159-249)||(21340583-21340672)
chr1 (169-249)||(51191859-51191939)
chr1 (159-218)||(21486268-21486327)
chr1 (159-218)||(32319260-32319319)
chr1 (159-226)||(46172350-46172417)
chr1 (159-218)||(47214269-47214328)
chr1 (159-218)||(51286318-51286377)
chr1 (159-249)||(34008241-34008330)
chr1 (168-249)||(1790578-1790659)
chr1 (159-200)||(29586054-29586095)
chr1 (164-219)||(37178769-37178824)
chr1 (159-206)||(44632589-44632636)
chr1 (167-206)||(49660249-49660288)
chr1 (164-226)||(24673132-24673193)
chr1 (164-226)||(50824807-50824869)
chr1 (159-191)||(34040478-34040510)
chr1 (166-206)||(43560273-43560313)
chr1 (158-206)||(47721469-47721517)
chr1 (158-206)||(47728461-47728509)
chr1 (159-223)||(50781516-50781580)
chr1 (159-203)||(52362543-52362587)
[»] chr8 (28 HSPs)
chr8 (159-248)||(45529167-45529256)
chr8 (158-241)||(30135943-30136026)
chr8 (159-249)||(1633810-1633900)
chr8 (159-249)||(7955927-7956017)
chr8 (159-249)||(11017866-11017956)
chr8 (159-248)||(16966846-16966935)
chr8 (168-249)||(32843862-32843943)
chr8 (159-249)||(11657921-11658010)
chr8 (159-249)||(36110199-36110289)
chr8 (168-249)||(37783891-37783972)
chr8 (159-249)||(7592910-7593001)
chr8 (174-249)||(34591340-34591415)
chr8 (158-232)||(40739850-40739923)
chr8 (159-232)||(41521029-41521102)
chr8 (159-241)||(7478841-7478922)
chr8 (159-249)||(35564350-35564440)
chr8 (167-248)||(32847607-32847688)
chr8 (159-249)||(7586083-7586172)
chr8 (173-226)||(13971199-13971252)
chr8 (166-203)||(38234075-38234112)
chr8 (164-216)||(1366666-1366718)
chr8 (159-226)||(41159832-41159899)
chr8 (159-249)||(1871535-1871624)
chr8 (167-249)||(6968153-6968234)
chr8 (159-249)||(33589151-33589240)
chr8 (164-218)||(36531661-36531715)
chr8 (169-249)||(888176-888257)
chr8 (159-203)||(4994442-4994486)
[»] chr6 (17 HSPs)
chr6 (159-226)||(11547472-11547539)
chr6 (159-249)||(3610881-3610971)
chr6 (159-249)||(34504081-34504171)
chr6 (167-249)||(5327511-5327593)
chr6 (167-249)||(14986664-14986746)
chr6 (166-249)||(30036714-30036797)
chr6 (159-249)||(2075371-2075461)
chr6 (159-248)||(2777238-2777326)
chr6 (164-249)||(335129-335212)
chr6 (159-232)||(4820312-4820387)
chr6 (159-218)||(13658893-13658952)
chr6 (166-249)||(22341095-22341177)
chr6 (166-248)||(30152451-30152533)
chr6 (159-218)||(3199021-3199080)
chr6 (167-206)||(10335620-10335659)
chr6 (159-240)||(14693181-14693262)
chr6 (159-239)||(35213491-35213571)
[»] scaffold0471 (1 HSPs)
scaffold0471 (159-249)||(68-158)
[»] scaffold0687 (1 HSPs)
scaffold0687 (159-249)||(2258-2349)
[»] scaffold0449 (1 HSPs)
scaffold0449 (168-249)||(9273-9354)
[»] scaffold0321 (1 HSPs)
scaffold0321 (170-232)||(19708-19770)
[»] scaffold0014 (1 HSPs)
scaffold0014 (164-242)||(122897-122974)
[»] scaffold0416 (1 HSPs)
scaffold0416 (159-206)||(6919-6966)
[»] scaffold0010 (1 HSPs)
scaffold0010 (159-226)||(134246-134313)
[»] scaffold0136 (1 HSPs)
scaffold0136 (159-239)||(38486-38566)


Alignment Details
Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 41569586 - 41569469
Alignment:
Q  13 agaagtggactaa-tcattgttgtgtcatgtgtggcaaatattcattttgttgtacactactcttgatgatgatttttacacgtcaaaattaacaatgaa 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41569586 agaagtggactaaatcattgttgtgtcatgtgtggcaaatattcattttgttgtacactactcttgatgatgatttttacacgtgaaaattaacaatgaa 41569487  T
Q  112 tttaattaaggtccattt 129  Q
    ||||||||||||||||||    
T  41569486 tttaattaaggtccattt 41569469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 433918 - 434001
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| | |||  ||||||| |||||||    
T  433918 attttttactttatctctctattgctatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttg 434001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 18177001 - 18177091
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||| ||||||||||||||| |||||||||||||| || || |||||||||||||||| |||||  ||||||| |||||||    
T  18177001 tcacattatttttttctttatctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatggttgtcaaataagttg 18177091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 41569406 - 41569317
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagtt 248  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||  || ||||||||||||||||||| |||||  ||||||| ||||||    
T  41569406 tcacgttactttttactttatctctctattgctatggtttccgtaccaataccacttttttctttgtaaaatatggttgtcaaataagtt 41569317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 37257511 - 37257578
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||| ||||||||||||||||||||||||| ||||||||||| || || |||||||||||||||||||    
T  37257511 tcacattattttttactttatctctctattgctatggtttccatgacaataccacttttttctttgta 37257578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 42223962 - 42223883
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgt 238  Q
    |||| ||| |||||| ||||||| ||||||  |||||||||||||||| ||||||||||||||||||| |||||||||||    
T  42223962 tcacattaatttttattttatctttctattgttatggtttccgtgtcaataccacttttttctttgtaaaatataattgt 42223883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 4952491 - 4952416
Alignment:
Q  158 ttcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatata 233  Q
    ||||| ||||||||||||||||||||||||| ||||||||| |||| || ||| | ||||||||||||| ||||||    
T  4952491 ttcacattattttttactttatctctctattgctatggttttcgtgccaatacaatttttttctttgtaaaatata 4952416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 670466 - 670392
Alignment:
Q  175 tttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||||||| ||||| ||||||||||| ||||| ||||||||||||| |||||  ||||||| |||||||    
T  670466 tttatctctctattgctatgatttccgtgtcaataccatttttttctttgtaaaatatggttgtcaaataagttg 670392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 248
Target Start/End: Complemental strand, 29051658 - 29051576
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagtt 248  Q
    ||||||||||||||  ||||||||| |||||||||||||| || ||||||||||||||||||| | |||  ||||||| ||||||    
T  29051658 ttattttttacttt--ctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagtt 29051576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 7552625 - 7552700
Alignment:
Q  168 tttttactttatctctctattactatggt--ttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    |||||| ||||||||||||||||||||||  ||||||| || ||||||| ||||||||||| ||||| ||||||||    
T  7552625 tttttattttatctctctattactatggtgtttccgtgccaataccactattttctttgtaaaatatgattgtcaa 7552700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 4758650 - 4758585
Alignment:
Q  158 ttcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttcttt 223  Q
    ||||| |||||||||| |||||||||||||| ||||| |||||||| || || |||||||||||||    
T  4758650 ttcacattattttttattttatctctctattgctatgatttccgtgccaatatcacttttttcttt 4758585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 26738885 - 26738801
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||| |||||||||||||| |||||||||| ||| || ||  || |||||||||||| ||||| |||||||| |||||||    
T  26738885 ttattttttattttatctctctattgctatggtttctgtgccaatattac-tttttctttgtaaaatatgattgtcaaataagttg 26738801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 41588576 - 41588523
Alignment:
Q  15 aagtggactaatcattgttgtgtcatgtgtggcaaatattcattttgttgtaca 68  Q
    ||||||||||| | |||||||||||||||||||||| |||||||||| ||||||    
T  41588576 aagtggactaacctttgttgtgtcatgtgtggcaaagattcattttggtgtaca 41588523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 42678810 - 42678878
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattacc-acttttttctttgta 226  Q
    |||| ||||||||||||||||||||||||| || |||||||||||  | |||| |||||||||||||||    
T  42678810 tcacattattttttactttatctctctattgctttggtttccgtgcaaatacctacttttttctttgta 42678878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 2464254 - 2464193
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||||||| |||||||||||||||| |||| |||||||||||| ||| || ||||||||||||    
T  2464254 ttatttttaactttatctctctattgctat-gtttccgtgtcaatactacctttttctttgta 2464193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 17779475 - 17779533
Alignment:
Q  191 tatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||||||||| ||||||||||||||||||| | |||  ||||||| |||||||    
T  17779475 tatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttg 17779533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 29879903 - 29879967
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttcttt 223  Q
    |||| |||||||| ||||||||||||||||  |||||||| ||||||| ||| ||||||| ||||    
T  29879903 tcacattatttttaactttatctctctattgttatggtttacgtgtcaatactactttttccttt 29879967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 10711785 - 10711852
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||| ||| ||||||||||||||||||||| || |||||| ||||| | ||||  |||||||||||||    
T  10711785 tcacattactttttactttatctctctattgctttggttttcgtgtaaatacctattttttctttgta 10711852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 13711368 - 13711329
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtca 206  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  13711368 ttttttactttctctctctattactttggtttccgtgtca 13711329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 31389608 - 31389675
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||| |||||||| ||||||| || |||||  ||||||||||||| || ||| |||||||||||||||    
T  31389608 tcacattatttttaactttatttccctattgttatggtttccgtgacaatactacttttttctttgta 31389675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 35705555 - 35705614
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttt 218  Q
    |||| |||| ||||||||||||||| |||| ||||||||| ||||||| ||| |||||||    
T  35705555 tcacattatattttactttatctctttattgctatggttttcgtgtcaatactacttttt 35705614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 4753231 - 4753281
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttt 218  Q
    |||||| |||||||||||||| ||||| ||||||||||| ||| |||||||    
T  4753231 tttttattttatctctctattgctatgatttccgtgtcaatactacttttt 4753281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 5027233 - 5027291
Alignment:
Q  175 tttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatata 233  Q
    |||||||||||||| ||||||||| |||| || ||| | ||||||||||||| ||||||    
T  5027233 tttatctctctattgctatggttttcgtgccaatacaatttttttctttgtaaaatata 5027291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 28679387 - 28679437
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttt 218  Q
    ||||||||||||||||||||| ||||| ||||| ||||| ||| |||||||    
T  28679387 tttttactttatctctctattgctatgatttccatgtcaatactacttttt 28679437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 32869892 - 32869954
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||||||||||||||||||| |||| || |||||| ||||  | ||||| |||||||||||||    
T  32869892 ttattttttactttatctctttattgctttggttttcgtgcaaataccaattttttctttgta 32869954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 11385016 - 11384935
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||||||||||||||  | |||||||||| | |||||    |||||||||||| ||||| |||||||  |||||||    
T  11385016 tttttactttatctctctattgttttggtttccgtataattacttaatttttctttgtaaaatatgattgtcacgtaagttg 11384935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 20911870 - 20911935
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatat 232  Q
    |||||||||||||||||||||| || |||||||||||  | || |  ||||||||||||| |||||    
T  20911870 ttttttactttatctctctattgctttggtttccgtgcaaatatctattttttctttgtaaaatat 20911935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 6941011 - 6941063
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgtcattaccacttttt 218  Q
    |||||||||||||||||| ||||  ||||||||||||| || ||| |||||||    
T  6941011 attttttactttatctctttattgttatggtttccgtgccaatactacttttt 6941063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 6999078 - 6999014
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttcttt 223  Q
    |||| ||| ||||||||||||||||||||| || |||||| ||||  | ||||| ||||||||||    
T  6999078 tcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttcttt 6999014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 18876923 - 18876887
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtg 203  Q
    |||||||||||||||||||||| || |||||||||||    
T  18876923 ttttttactttatctctctattgctttggtttccgtg 18876887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 28245789 - 28245833
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtg 203  Q
    |||| ||||||||||||||||||||||||| || |||||| ||||    
T  28245789 tcacattattttttactttatctctctattgctttggttttcgtg 28245833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 36802957 - 36802989
Alignment:
Q  159 tcactttattttttactttatctctctattact 191  Q
    |||| ||||||||||||||||||||||||||||    
T  36802957 tcacattattttttactttatctctctattact 36802989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 390870 - 390960
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||| ||||| |||||||| |||||||    
T  390870 tcacattattttttactttatctctctattgctatagtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaataagttg 390960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 39020169 - 39020087
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  39020169 tcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaa 39020087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 32767737 - 32767827
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| | |||  ||||||| |||||||    
T  32767737 tcacattattttttactttatctctctattgctatggtttccgtgtcaatgccacttttttctttgtaaagtatggttgtcaaataagttg 32767827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 37508508 - 37508418
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||| |||||  ||||||| |||||||    
T  37508508 tcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 37508418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 44677494 - 44677404
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||| | |||  ||||||| |||||||    
T  44677494 tcacattattttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttg 44677404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 30909089 - 30909180
Alignment:
Q  158 ttcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||| ||| |||||||||||||||||||||  |||||||| |||| || ||||||||||||||||||| ||||| |||||||| |||||||    
T  30909089 ttcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatgattgtcaaataagttg 30909180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 10206983 - 10206893
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| |||||||||||||||||| || |||||||||||||| || ||||||||||||||||||| |||||  ||||||| |||||||    
T  10206983 tcacattactttttactttatctctctgttgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 10206893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 54773755 - 54773673
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||| | |||  ||||||| |||||||    
T  54773755 ttttttactttatctctctcttgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttg 54773673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 28419219 - 28419134
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||||||||||||||||||  |||||||||| || || ||||||||||||||||||| |||||  ||||||| |||||||    
T  28419219 ttattttttactttatctctctattgttatggtttccatgccaataccacttttttctttgtaaaatatggttgtcaagtaagttg 28419134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 43905034 - 43905123
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagtt 248  Q
    |||| ||| |||||||||||||||||||||  ||||||||| |||||| ||||||||||||||||||| |||||  ||||||| ||||||    
T  43905034 tcacattactttttactttatctctctattgttatggtttctgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagtt 43905123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 8821691 - 8821758
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||| ||||||||||||||||||||||||| |||||||||| |||||| || ||||||||||||||||    
T  8821691 tcacattattttttactttatctctctattgctatggtttctgtgtcaatatcacttttttctttgta 8821758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 39671107 - 39671017
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| |||||||||||||||||||||  |||| ||||||||||| || |||||||||||||||| |||||  ||||||| |||||||    
T  39671107 tcacattactttttactttatctctctattgttatgatttccgtgtcaatatcacttttttctttgtaaaatatggttgtcaaataagttg 39671017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 49363261 - 49363179
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    |||| ||| |||||||||||||||||||||  ||||||||||||| || |||||||||||||||| || |||||| |||||||    
T  49363261 tcacattactttttactttatctctctattgatatggtttccgtgccaataccacttttttctttataaaatatagttgtcaa 49363179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 54028008 - 54028070
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||||||||||||||||||||||||  |||| ||||||||||| |||||||||||||||||||    
T  54028008 ttattttttactttatctctctattgttatgatttccgtgtcaataccacttttttctttgta 54028070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 249
Target Start/End: Original strand, 54195409 - 54195491
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||||||||||||| |||| ||||||| || |||||||||||||||| | |||  ||||||| |||||||    
T  54195409 ttttttactttatctctctattactatagttttcgtgtcaatatcacttttttctttgtaaattatggttgtcaaataagttg 54195491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 11633673 - 11633756
Alignment:
Q  158 ttcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    ||||| ||| ||||||||||||||||||||| |||||||||||||| || |||||||||| | |||||| |||||  |||||||    
T  11633673 ttcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttctttttgtaaaatatggttgtcaa 11633756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 33375921 - 33375988
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||| || |||||||||| ||||||||    
T  33375921 tcacattattttttactttatctctctattgctatagtttccgtgccaataccacttttatctttgta 33375988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 55013063 - 55013145
Alignment:
Q  158 ttcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    ||||| ||| |||||| ||||||||| |||| ||||||||||||||||| || |||||||||||||||| ||||| ||||||||    
T  55013063 ttcacattacttttta-tttatctctttattgctatggtttccgtgtcaatatcacttttttctttgtaaaatatgattgtcaa 55013145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 22371257 - 22371334
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    ||||||||||||||||||||||||| ||||||||||  || || ||||| ||||||||||||| | ||| ||||||||    
T  22371257 ttattttttactttatctctctattgctatggtttctttgccaataccaattttttctttgtagagtatgattgtcaa 22371334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 36121882 - 36121972
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| ||||||||||||||||||||| ||||| |||  ||| || |||||| |||||||||||| |||||  ||||||| |||||||    
T  36121882 tcacgttactttttactttatctctctattgctatgatttttgtgccaataccacatttttctttgtaaaatatggttgtcaaataagttg 36121972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 29634077 - 29634000
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    ||||||||||| |||||||||||||  |||| ||||||||  | ||||||||||||||||||| |||||  |||||||    
T  29634077 ttattttttacattatctctctattgatatgatttccgtgcaaataccacttttttctttgtaaaatatggttgtcaa 29634000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 39907556 - 39907472
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaatt 243  Q
    |||| |||||||||||||||| |||||||| ||||| |||||||||||  || |||||||| |||||| | |||  |||||||||    
T  39907556 tcacattattttttactttatttctctattgctatgatttccgtgtcaacactacttttttttttgtaaattatggttgtcaatt 39907472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 37035527 - 37035488
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtca 206  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  37035527 ttttttactttatctctctattactttggtttccgtgtca 37035488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 46984637 - 46984582
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccactttttt 219  Q
    ||||||| |||||||||||||||||  ||||||||||||| || ||||||||||||    
T  46984637 ttattttctactttatctctctattgttatggtttccgtgccaataccactttttt 46984582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 49417636 - 49417695
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttt 218  Q
    |||| |||||||||| |||||||||||||| |||||||||||||| || ||| |||||||    
T  49417636 tcacattattttttattttatctctctattgctatggtttccgtgccaatactacttttt 49417695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 21195891 - 21195842
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccactttt 217  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||| ||||||    
T  21195891 tttttactttatctctctattgctatgatttccgtgtcaatactactttt 21195842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 26996377 - 26996435
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccactttttt 219  Q
    |||| ||||||||||||||||||||  ||| ||||||||||||||||| ||||| ||||||    
T  26996377 tcacattattttttactttatctct--attgctatggtttccgtgtcaataccattttttt 26996435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 46982900 - 46982831
Alignment:
Q  172 tactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    |||||||| |||||||| ||||  ||||||||  | ||||||||||||||||||| |||||| |||||||    
T  46982900 tactttatatctctattgctattatttccgtgctaataccacttttttctttgtaaaatatagttgtcaa 46982831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 249
Target Start/End: Complemental strand, 35201531 - 35201460
Alignment:
Q  177 tatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||||| ||||||||| ||||||| ||| || |||||||||||| | ||| |||||||| |||||||    
T  35201531 tatctctctattgctatggttttcgtgtcaatactac-tttttctttgtaaattatgattgtcaaataagttg 35201460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 23770747 - 23770708
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtca 206  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  23770747 ttttttactttctctctctattactttggtttccgtgtca 23770708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 9753409 - 9753459
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttt 218  Q
    |||||||||||||||||||||||| ||||||  |||||| |||||| ||||    
T  9753409 tttttactttatctctctattactttggtttttgtgtcaataccacatttt 9753459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 50638354 - 50638317
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtg 203  Q
    ||||||||||||||||||||||| || |||||||||||    
T  50638354 attttttactttatctctctattgctttggtttccgtg 50638317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 37927208 - 37927172
Alignment:
Q  166 attttttactttatctctctattactatggtttccgt 202  Q
    ||||||||||||||||||||||| || ||||||||||    
T  37927208 attttttactttatctctctattgctttggtttccgt 37927172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 55400060 - 55400124
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttcttt 223  Q
    |||| ||| ||||||||||||||||||||| || |||||| ||||  | ||||| ||||||||||    
T  55400060 tcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttcttt 55400124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 5042309 - 5042398
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagtt 248  Q
    |||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||  ||||||| ||||||    
T  5042309 tcacattattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagtt 5042398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 35099015 - 35098925
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||| | ||| |||||||| |||||||    
T  35099015 tcacattattttttactttatctctctattgctatagtttccgtgtcaataccacttttttctttgtaaattatgattgtcaaataagttg 35098925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 33620674 - 33620736
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  33620674 ttattttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgta 33620736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 2688991 - 2688914
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||| ||||||||||||||| |||||| |||||||    
T  2688991 ttattttttactttatctctctattgctatggtttccgtgccaatacaacttttttctttgtaaaatatagttgtcaa 2688914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 4430939 - 4430856
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||| | |||  ||||||| |||||||    
T  4430939 attttttactttatctctctattgctatggttttcgtgtcaataccacttttttctttgtaaagtatgcttgtcaaataagttg 4430856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 6931069 - 6930990
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgt 238  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||| ||| ||||| |||||    
T  6931069 tcacattattttttactttatctctctattgctatgatttccgtgtcaataccacttttttcttcgtaaaatatgattgt 6930990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 8267830 - 8267740
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||||| |||  |||||||||||||||| ||||||||||||||||||| |  || |||||||| |||||||    
T  8267830 tcacattattttttactttatctctccattgttatggtttccgtgtcaataccacttttttctttgtaaagcatgattgtcaaataagttg 8267740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 18842331 - 18842258
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatat 232  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||| || ||||||||||||||||||| |||||    
T  18842331 tcacattattttttactttatctctctattgctatggttttcgtgccaataccacttttttctttgtaaaatat 18842258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 15267850 - 15267912
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||||||||||||||||||||||||  |||||||| ||||||| || ||||||||||||||||    
T  15267850 ttattttttactttatctctctattgttatggttttcgtgtcaatatcacttttttctttgta 15267912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 16437566 - 16437492
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    |||||||| |||||||||||||  ||||||||||||| || ||||||||||||||||||| | ||| ||||||||    
T  16437566 ttttttaccttatctctctattcatatggtttccgtgccaataccacttttttctttgtaaagtatgattgtcaa 16437492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 21064236 - 21064146
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| ||||||||||||||| |||||  |||| ||||||||||| ||||||||||||||||||| |||||   |||||| |||||||    
T  21064236 tcacattactttttactttatctccctattgttatgatttccgtgtcaataccacttttttctttgtaaaatatgggtgtcaaataagttg 21064146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 5821617 - 5821562
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccactttttt 219  Q
    ||||||||||||||||||||||||  |||||||||||||| || ||||||||||||    
T  5821617 ttattttttactttatctctctatagctatggtttccgtgccaataccactttttt 5821562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 23126342 - 23126261
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||| |||||||||||||  ||||||||||||| ||  | |||||||||||||||| | |||||||||||| |||||||    
T  23126342 ttttttacgttatctctctattgttatggtttccgtgccaa-atcacttttttctttgtaaagtataattgtcaaataagttg 23126261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 39088869 - 39088789
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||||||||||||||  |||||||||| ||||| ||||  ||||||||||||| |||||  ||||||| |||||||    
T  39088869 tttttactttatctctctattgatatggtttccatgtcaatacc-tttttttctttgtaaaatatcgttgtcaaataagttg 39088789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 37700521 - 37700580
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttt 218  Q
    |||| ||||||||||| ||||||||||||| |||||||||||||| || ||| |||||||    
T  37700521 tcacattattttttaccttatctctctattgctatggtttccgtgccaatactacttttt 37700580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 20770192 - 20770282
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||||| ||||   |||||||||||| | ||| ||||||  ||||||||    
T  20770192 tcacattattttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgtaaattatgattgtcccttaagttg 20770282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 41724256 - 41724317
Alignment:
Q  165 tattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    ||||||||||||||| ||||||||| | |||||||||||| | ||||  |||||||||||||    
T  41724256 tattttttactttatttctctattattttggtttccgtgtaaatacctattttttctttgta 41724317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 43441799 - 43441866
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||| ||| ||||||||||||||||||||| || |||||| ||||  | ||||| |||||||||||||    
T  43441799 tcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttgta 43441866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 17402922 - 17402884
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtca 206  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  17402922 tttttactttatctctctattgctatgatttccgtgtca 17402884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 2224866 - 2224942
Alignment:
Q  172 tactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||||| |||||||||| |||||||| || ||| || |||||||||||| | |||  ||||||| |||||||    
T  2224866 tactttatctctttattactatgttttccgtgccaatactac-tttttctttgtaaattatggttgtcaaataagttg 2224942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 42267416 - 42267496
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||||||||||||||  |||| ||||||||||| ||| | |||||||||| || | |||  ||||||| |||||||    
T  42267416 tttttactttatctctctattgttatgatttccgtgtcaatacta-ttttttctttataaattatggttgtcaaataagttg 42267496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 9581640 - 9581684
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtg 203  Q
    |||| |||||||||||||||||||||||||  | |||||||||||    
T  9581640 tcacattattttttactttatctctctattgttttggtttccgtg 9581684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 7e-27; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 42959341 - 42959422
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagtt 248  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||||||| ||||||    
T  42959341 ttttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaataagtt 42959422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 36111397 - 36111315
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||| |||||  ||||||| |||||||    
T  36111397 ttttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 36111315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 41486153 - 41486063
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||| |||||  ||||||| |||||||    
T  41486153 tcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 41486063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 164 - 249
Target Start/End: Original strand, 12112693 - 12112778
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| | |||  ||||||| |||||||    
T  12112693 ttattttttactttatctctctattgctatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttg 12112778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 26206988 - 26206897
Alignment:
Q  158 ttcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||| ||| |||||||||||||||||||||  ||||||||| |||||| ||||||||||||||||||| |||||  ||||||| |||||||    
T  26206988 ttcacattactttttactttatctctctattgttatggtttctgtgtcagtaccacttttttctttgtaaaatatggttgtcaaataagttg 26206897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 14451454 - 14451544
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| |||||||||||||||||||||  |||||||| ||||||| ||||||||||||||||||| |||||  ||||||| |||||||    
T  14451454 tcacattagtttttactttatctctctattgttatggttttcgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagttg 14451544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 51746281 - 51746371
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| |||||||||||||||||||||||||  ||||||||||||| || || |||||||||||||||| |||||  ||||||| |||||||    
T  51746281 tcacattattttttactttatctctctattgttatggtttccgtgccaatatcacttttttctttgtaaaatatgtttgtcaaataagttg 51746371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 30079907 - 30079996
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagtt 248  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||| || ||||||||||||||||||| | |||  ||||||| ||||||    
T  30079907 tcacattattttttactttatctctctattgctatagtttccgtgccaataccacttttttctttgtaaattatggttgtcaaataagtt 30079996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 248
Target Start/End: Complemental strand, 25318070 - 25317987
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagtt 248  Q
    |||||||||||||||||||| |||| || |||||||||||||| ||||||||||||||||||| |||||  ||||||| ||||||    
T  25318070 ttattttttactttatctctttattgct-tggtttccgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagtt 25317987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 6141777 - 6141706
Alignment:
Q  170 tttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    |||||||||||||| |||| ||||| |||||||| || ||||||||||||||||||| ||||||||||||||    
T  6141777 tttactttatctctttattgctatgatttccgtgccaataccacttttttctttgtaaaatataattgtcaa 6141706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 31076122 - 31076204
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||| | |||  ||||||| |||||||    
T  31076122 attttttactttatctctctattactatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataagttg 31076204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 9118874 - 9118784
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||||||||| ||||| ||| |||| || ||||| ||||||||||||| |||||  ||||||| |||||||    
T  9118874 tcacattattttttactttatctctctattgctatgattttcgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttg 9118784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 249
Target Start/End: Original strand, 17475946 - 17476027
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||||||||||||||| ||||||||||||||||| ||| || |||||||||||| | ||| |||||||| |||||||    
T  17475946 ttttttactttatctctctattgctatggtttccgtgtcaatactac-tttttctttgtaaattatgattgtcaaataagttg 17476027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 21260359 - 21260441
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    |||| ||||||||| |||||||||||||||  ||||||||||||| || |||||| |||||||||||| ||||| ||||||||    
T  21260359 tcacattatttttttctttatctctctattgttatggtttccgtgccaataccacctttttctttgtaaaatatgattgtcaa 21260441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 33899336 - 33899246
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||| |||||||||||||||  ||||||||||||| || ||||| ||||||||||||| |||||  ||||||| |||||||    
T  33899336 tcacattatttttttctttatctctctattgttatggtttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttg 33899246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 41082379 - 41082468
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| |||||||| |||||||||||||||||||||| ||| ||||||| ||| || |||||||||||| | |||||||||||| |||||||    
T  41082379 tcacattatttttcactttatctctctattactatgattttcgtgtcaatactac-tttttctttgtaaattataattgtcaaataagttg 41082468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 51194339 - 51194420
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||||||||||||||  |||||||| |||| || ||||||||||||||||||| |||||  ||||||| |||||||    
T  51194339 tttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 51194420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 48536366 - 48536441
Alignment:
Q  168 tttttactttatctc--tctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    |||||||||||||||  ||||||| |||||||||||||||| ||| | ||||||||||||||||||| ||||||||    
T  48536366 tttttactttatctctctctattattatggtttccgtgtcaatactatttttttctttgtacaatatgattgtcaa 48536441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 624322 - 624255
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||| ||| ||||||||||||||||||||| ||||||||| |||| || |||||||||||||||||||    
T  624322 tcacattactttttactttatctctctattgctatggttttcgtgccaataccacttttttctttgta 624255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 5932167 - 5932078
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||| |||||||| |||||| |||||||||||||| || ||||| ||||||||||||| |||||  ||||||| |||||||    
T  5932167 tcacattatttttt-ctttatctttctattgctatggtttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttg 5932078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 50273063 - 50272993
Alignment:
Q  179 tctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||| |||||||||||||| || ||||||||||||||||||| |||||  ||||||| |||||||    
T  50273063 tctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 50272993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 53152326 - 53152241
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||||||||||||| ||||  ||||||||| ||| || ||||||||||||||||||| | |||  ||||||| |||||||    
T  53152326 ttattttttactttatctctatattgttatggtttctgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttg 53152241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 35820241 - 35820321
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagtt 248  Q
    |||||||||| ||||||||||| |||| |||||||  || ||||||||||||||||||| | |||| ||||||| ||||||    
T  35820241 tttttactttttctctctattattatgatttccgtaccaataccacttttttctttgtaaactatagttgtcaaataagtt 35820321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 54669588 - 54669504
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||| |||||||||||||||| ||| ||||||||||||| ||| || |||||||||||| | |||  ||||||| |||||||    
T  54669588 ttatttttcactttatctctctattgctacggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataagttg 54669504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 47965800 - 47965888
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| ||||||||||||||||  |||  |||||||| |||| || ||||||||||||||||||| |||||  ||||||| |||||||    
T  47965800 tcacattactttttactttatctct--attgatatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 47965888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 49896676 - 49896609
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||||| |||||  ||||||||||||    
T  49896676 tcacattattttttactttatctctctattgctttgattttcgtgtcaataccaactttttctttgta 49896609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 28458387 - 28458297
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||||| ||||   |||||||||||| | ||| ||||||  ||||||||    
T  28458387 tcacattattttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgtaaattatgattgtcccttaagttg 28458297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 2256333 - 2256281
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgtcattaccacttttt 218  Q
    ||||||||||||||||||||||| ||||| ||||||| ||| ||| |||||||    
T  2256333 attttttactttatctctctattgctatgatttccgtttcaatactacttttt 2256281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 28657451 - 28657407
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtg 203  Q
    |||| ||||||||||||||||||||||||| || |||||||||||    
T  28657451 tcacattattttttactttatctctctattgctttggtttccgtg 28657407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 39344990 - 39344910
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtc 239  Q
    |||| ||| ||||||||||||||||||||| || |||||| ||||  | ||||| ||||||||||||| | ||| ||||||    
T  39344990 tcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttgtaaattatgattgtc 39344910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 30170030 - 30169991
Alignment:
Q  159 tcactttattttttactttatctctctattactatggttt 198  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  30170030 tcacattattttttactttatctctctattgctatggttt 30169991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 37066049 - 37066108
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttt 218  Q
    |||| ||||||||||||||||||||| ||| ||||| |||||||| || ||| |||||||    
T  37066049 tcacattattttttactttatctctccattgctatgatttccgtgccaatactacttttt 37066108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 6494898 - 6494856
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtca 206  Q
    |||||||||||||||| ||||||||  ||||||||||||||||    
T  6494898 ttattttttactttatttctctattgttatggtttccgtgtca 6494856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 188
Target Start/End: Complemental strand, 13263407 - 13263378
Alignment:
Q  159 tcactttattttttactttatctctctatt 188  Q
    ||||||||||||||||||||||||||||||    
T  13263407 tcactttattttttactttatctctctatt 13263378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 2999172 - 2999212
Alignment:
Q  158 ttcactttattttttactttatctctctattactatggttt 198  Q
    ||||| ||||||||||||||||||||||||| || ||||||    
T  2999172 ttcacattattttttactttatctctctattgctttggttt 2999212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 29162986 - 29162896
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| |||||||||||||||||||||  ||||||||||||| || ||||||||||||||||||| |||||||||||||| |||||||    
T  29162986 tcacattactttttactttatctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaaataagttg 29162896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 32815229 - 32815319
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||| || ||||||||||||||||||| |||||  ||||||| |||||||    
T  32815229 tcacattattttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 32815319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 13162989 - 13163070
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||| |||||  ||||||| |||||||    
T  13162989 tttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 13163070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 38779754 - 38779664
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||| || ||||||||||||||||||| | |||  ||||||| |||||||    
T  38779754 tcacattattttttacttcatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttg 38779664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 39231738 - 39231648
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| || |||||| |||||||||||| | |||  ||||||| |||||||    
T  39231738 tcacattattttttactttatctctctattgctatggtttccgtgccaataccacctttttctttgtaaagtatggttgtcaaataagttg 39231648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 40353325 - 40353398
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatat 232  Q
    |||| |||||||||| |||||||||||||| |||||||||||||| || ||||||||||||||||||| |||||    
T  40353325 tcacattattttttattttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatat 40353398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 21023128 - 21023045
Alignment:
Q  158 ttcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    ||||| |||||||||||||||||||||||||  |||||||||||||  | ||||||||||||||||||| |||||  |||||||    
T  21023128 ttcacattattttttactttatctctctattgttatggtttccgtgataataccacttttttctttgtaaaatatggttgtcaa 21023045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 13906459 - 13906385
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    ||||||||||||||||||||||  ||||||||||||| || ||||||||||||||||||| |||||  |||||||    
T  13906459 ttttttactttatctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaa 13906385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 19786089 - 19785999
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| ||||||||||||||||||||| || |||||| |||| || ||||||||||||||||||| |||||  ||||||| |||||||    
T  19786089 tcacattactttttactttatctctctattgctctggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 19785999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 37808769 - 37808692
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    |||||||||||||||||||||||||  |||| |||||||| || ||||||||||||||||||| |||||  |||||||    
T  37808769 ttattttttactttatctctctattgttatgctttccgtgccaataccacttttttctttgtaaaatatggttgtcaa 37808692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 39332046 - 39332119
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatat 232  Q
    |||| ||| ||||||||||||||||||||| ||||| |||||||| || ||||||||||||||||||| |||||    
T  39332046 tcacattactttttactttatctctctattgctatgatttccgtgccaataccacttttttctttgtaaaatat 39332119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 249
Target Start/End: Original strand, 41402577 - 41402659
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||| |||| |||||||||| |||||||||||||| || ||||||||||||||||||| |||||  |||| || |||||||    
T  41402577 tttttttctttgtctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgttaaataagttg 41402659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 26041320 - 26041240
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||| || |||||||||||| | |||  ||||||| |||||||    
T  26041320 tttttactttatctctctatttctatgatttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataagttg 26041240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 47078261 - 47078217
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtg 203  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||    
T  47078261 tcacattattttttactttatctctctattgctatggtttccgtg 47078217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 21822600 - 21822542
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||||||||||||||||||||||| || ||| ||||| | ||||| |||||||||||||    
T  21822600 tttttactttatctctctattactttgattttcgtgtaaataccaattttttctttgta 21822542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 41666932 - 41666850
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    |||| ||| |||||||||||||||||||||  |||||| |||||| || ||  ||||||||||||||| |||||  |||||||    
T  41666932 tcacattactttttactttatctctctattgttatggtgtccgtgccaatattacttttttctttgtaaaatatggttgtcaa 41666850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 35588902 - 35588821
Alignment:
Q  158 ttcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtc 239  Q
    ||||| ||||||||||||||||||||||||| || || ||| ||||  | |||||  |||||||||||| | ||||||||||    
T  35588902 ttcacattattttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattataattgtc 35588821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 41026132 - 41026185
Alignment:
Q  172 tactttatctctctattactatggtttccgtgtcattaccacttttttctttgt 225  Q
    |||||| |||||||||| |||||||||||||  || ||||||||||||||||||    
T  41026132 tactttgtctctctattgctatggtttccgtaccaataccacttttttctttgt 41026185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 29002669 - 29002754
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaag 246  Q
    |||| ||| ||||||||||||||||  | |  ||||||||||||| || ||| ||||||||||||||| |||||| ||||||| ||||    
T  29002669 tcacattactttttactttatctct--actgttatggtttccgtgccaatacaacttttttctttgtaaaatatagttgtcaaataag 29002754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 13729787 - 13729854
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||| ||||||||||||||||||||||||| |  |||||| ||||  | ||||| |||||||||||||    
T  13729787 tcacattattttttactttatctctctattgcgttggttttcgtgcaaataccaattttttctttgta 13729854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 28036805 - 28036872
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||| ||||||||||||||||||||||||| || |||||| ||||  | |||||  ||||||||||||    
T  28036805 tcacattattttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgta 28036872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 35600741 - 35600780
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtca 206  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  35600741 ttttttactttttctctctattactttggtttccgtgtca 35600780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 39137213 - 39137280
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||| |||||||| ||||||||||| |||| |||||||||||||  || ||  |||||||||||||||    
T  39137213 tcacattatttttaactttatctctatattgctatggtttccgtaccaatattacttttttctttgta 39137280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 39823870 - 39823959
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| |||||||||||||||||| ||||||  |||  ||||||||||| ||| || |||||||||||| | |||  ||||||| |||||||    
T  39823870 tcacattattttttactttatctttctattgttataatttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataagttg 39823959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 188
Target Start/End: Original strand, 20482588 - 20482617
Alignment:
Q  159 tcactttattttttactttatctctctatt 188  Q
    ||||||||||||||||||||||||||||||    
T  20482588 tcactttattttttactttatctctctatt 20482617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 36019486 - 36019567
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||||||||| |||| |||||||||| |||||| ||||    ||||||||||| | |||  ||||||| |||||||    
T  36019486 tttttactttatctctatattgctatggtttctgtgtcaatacctaccttttctttgtaaattatggttgtcaaataagttg 36019567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 43573554 - 43573489
Alignment:
Q  158 ttcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttcttt 223  Q
    ||||| ||| ||||||||||||||||||||| || |||||| ||||  | ||||| ||||||||||    
T  43573554 ttcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttcttt 43573489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 46653089 - 46653040
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtcattaccacttt 216  Q
    ||||||| ||||||||| |||| ||||||||||||||||| ||| |||||    
T  46653089 ttttttattttatctctttattgctatggtttccgtgtcaatactacttt 46653040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 46773648 - 46773584
Alignment:
Q  185 tattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| |||||||||||||| || ||||| |||||||||| || |||||  ||||||| |||||||    
T  46773648 tattgctatggtttccgtgccaataccaattttttctttataaaatatggttgtcaaataagttg 46773584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 46082131 - 46082049
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||| |||||||    
T  46082131 tcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatagttgtcaa 46082049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 20565117 - 20565038
Alignment:
Q  170 tttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||  ||||||| |||||||    
T  20565117 tttactttatctctctattactatggtttccgtggcaataccacttttttctttgtaaaatatggttgtcaaataagttg 20565038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 3024755 - 3024670
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||||||||||| |||||||||||||| || || || ||||||||||||| ||||| |||||||| |||||||    
T  3024755 ttattttttactttatctctctattgctatggtttccgtgccaatatcaattttttctttgtaaaatatgattgtcaaataagttg 3024670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 248
Target Start/End: Complemental strand, 38303693 - 38303609
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagtt 248  Q
    ||||||||||||||||||||||||| | |||||||||||| || ||||||||||||||||||| |||||  ||||||| ||||||    
T  38303693 ttattttttactttatctctctattgccatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagtt 38303609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 4514465 - 4514374
Alignment:
Q  158 ttcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||| || || |||||||||||||||| |||||  ||||||| |||||||    
T  4514465 ttcacattattttttactttatctttctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatgtttgtcaaataagttg 4514374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 7128178 - 7128269
Alignment:
Q  158 ttcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||| ||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||||||||| | |||  ||||||| |||||||    
T  7128178 ttcacattattttctactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttg 7128269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 756917 - 757007
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||||||||| | |||  ||||||| |||||||    
T  756917 tcacattattttttactttatctctctattgctatggtttccgtgccaataccatttttttctttgtaaagtatggttgtcaaataagttg 757007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 1852961 - 1852871
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||| |||| |||||||||| |||||||||||||| || ||||||||||||||||||| |||||  ||||||| |||||||    
T  1852961 tcacattatttttttctttgtctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 1852871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 3603172 - 3603262
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| |||||| |||||||||||||| |||||||||||||| || ||||||||||||||||||| |||||  ||||||| |||||||    
T  3603172 tcacattactttttagtttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 3603262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 26585889 - 26585799
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||||| | |||  ||||||| |||||||    
T  26585889 tcacattattttttactttatcgctctattgttatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttg 26585799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 26837513 - 26837603
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| ||||||||||||||||||||| |||| ||||| |||||| ||||||||||||||||||| |||||  ||||||| |||||||    
T  26837513 tcacgttactttttactttatctctctattgctatagtttctgtgtcaataccacttttttctttgtaaaatatggttgtcaaataagttg 26837603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 33024581 - 33024491
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||| ||||||||||||||| |||||||||||||| || || |||||||||||||||| |||||  ||||||| |||||||    
T  33024581 tcacattatttttttctttatctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatggttgtcaaataagttg 33024491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 36779270 - 36779197
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    ||||||||||||||||||||| ||||| ||||||||||| || |||||||||||||||| ||||| ||||||||    
T  36779270 tttttactttatctctctattgctatgatttccgtgtcaatatcacttttttctttgtaaaatatgattgtcaa 36779197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 902699 - 902786
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaag 246  Q
    |||| ||| ||||||||||||||||||||| ||||| ||||||||  | ||||||||||||||||||| ||||| |||||||| ||||    
T  902699 tcacattactttttactttatctctctattgctatgatttccgtgctaataccacttttttctttgtaaaatatgattgtcaaataag 902786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 8411728 - 8411638
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| |||||||||||||||||||||||||  | ||||||||||| || ||||||||||||||||||| |||||  |||| || |||||||    
T  8411728 tcacattattttttactttatctctctattgttttggtttccgtgccaataccacttttttctttgtaaaatatggttgttaaataagttg 8411638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 248
Target Start/End: Complemental strand, 36673736 - 36673653
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagtt 248  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||| || |||||||||||| | |||  ||||||| ||||||    
T  36673736 ttattttttactttatctctctattgctatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaataagtt 36673653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 9008286 - 9008376
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||||||||| | ||||||||  || || ||||||||||||||||||| | |||  ||||||| |||||||    
T  9008286 tcacattattttttactttatctctctattgccatggtttctatgccaataccacttttttctttgtaaagtatggttgtcaaataagttg 9008376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 16986999 - 16987088
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| |||||||||||||||||| |||||| ||||| ||||||||||| ||| || |||||||||||| | | |||||||||| |||||||    
T  16986999 tcacattattttttactttatctttctattgctatgatttccgtgtcaatactac-tttttctttgtaaattttaattgtcaaataagttg 16987088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 21340583 - 21340672
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||||| || || ||||||| ||||| |||||  ||||||| |||||||    
T  21340583 tcacattactttttactttatctctctattgctatggtttccgtgtcaataacatttttttc-ttgtaaaatatggttgtcaaataagttg 21340672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 51191859 - 51191939
Alignment:
Q  169 ttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||||||  |||| |||||||| || ||||| ||||||||||||| |||||  ||||||| |||||||    
T  51191859 ttttactttatctctctattgttatgctttccgtgccaataccatttttttctttgtaaaatatggttgtcaaataagttg 51191939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 21486327 - 21486268
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttt 218  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| || ||| |||||||    
T  21486327 tcacattattttttactttatctctctattgctatggtttccgtgccaatactacttttt 21486268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 32319319 - 32319260
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttt 218  Q
    |||| |||||||| |||| ||||||||||||||||||||||||||||| ||| |||||||    
T  32319319 tcacattatttttcacttcatctctctattactatggtttccgtgtcaatactacttttt 32319260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 46172417 - 46172350
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||| |||||||||| |||||||||||||| |||| |||| |||| || |||||||||||||||||||    
T  46172417 tcacattattttttattttatctctctattgctatagttttcgtgccaataccacttttttctttgta 46172350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 47214269 - 47214328
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttt 218  Q
    |||| |||||||||||||||||||||||||  ||||||||||||| || ||| |||||||    
T  47214269 tcacattattttttactttatctctctattgttatggtttccgtgccaatactacttttt 47214328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 51286377 - 51286318
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttt 218  Q
    |||| |||||||||| |||||||||||||| |||||||||||||| || ||| |||||||    
T  51286377 tcacattattttttattttatctctctattgctatggtttccgtgccaatactacttttt 51286318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 34008241 - 34008330
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||  ||||||||||||||||| || || ||| || |||||||||||| | | || ||||||| |||||||    
T  34008241 tcacattattttttactttatcttactattactatggtttccatgccaatactac-tttttctttgtaaattttagttgtcaaataagttg 34008330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 1790578 - 1790659
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||| |||||||  || |||||||||| || || || ||||||||||||| |||||  ||||||| |||||||    
T  1790578 tttttactttatccctctattgataaggtttccgtgccaatatcatttttttctttgtaaaatatggttgtcaaataagttg 1790659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 29586054 - 29586095
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttcc 200  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  29586054 tcacattattttttactttatctctctattattatggtttcc 29586095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 37178769 - 37178824
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccactttttt 219  Q
    |||||||||  |||| |||| |||| ||||||||||||||||| ||||||||||||    
T  37178769 ttatttttttatttagctctttattgctatggtttccgtgtcaataccactttttt 37178824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 44632589 - 44632636
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtca 206  Q
    |||| ||||||||||||||||||||||||| |||| | ||||||||||    
T  44632589 tcacattattttttactttatctctctattgctatagattccgtgtca 44632636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 49660249 - 49660288
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtca 206  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  49660249 ttttttactttctctctctattactttggtttccgtgtca 49660288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 24673132 - 24673193
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||||||||| |||||||||||||| || | |||||||||||| ||| | |||||||||||||    
T  24673132 ttattttttagtttatctctctattgctctagtttccgtgtcaatacta-ttttttctttgta 24673193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 50824807 - 50824869
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    ||||||||||||||||||||||||| || |||||| | ||||| ||||   ||||||||||||    
T  50824807 ttattttttactttatctctctattgctttggttttcatgtcaatacctactttttctttgta 50824869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 34040510 - 34040478
Alignment:
Q  159 tcactttattttttactttatctctctattact 191  Q
    |||| ||||||||||||||||||||||||||||    
T  34040510 tcacattattttttactttatctctctattact 34040478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 43560273 - 43560313
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgtca 206  Q
    |||||||||||| ||||||||||||| || |||||||||||    
T  43560273 attttttactttctctctctattactttgttttccgtgtca 43560313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 47721469 - 47721517
Alignment:
Q  158 ttcactttattttttactttatctctctattactatggtttccgtgtca 206  Q
    ||||| ||||||||||||||||||||||||| || || ||| |||||||    
T  47721469 ttcacattattttttactttatctctctattgctttgattttcgtgtca 47721517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 47728461 - 47728509
Alignment:
Q  158 ttcactttattttttactttatctctctattactatggtttccgtgtca 206  Q
    ||||| ||||||||||||||||||||||||| || || ||| |||||||    
T  47728461 ttcacattattttttactttatctctctattgctttgattttcgtgtca 47728509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 50781580 - 50781516
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttcttt 223  Q
    |||| ||| ||||||||||||||||||||| || |||||| ||||  | ||||| ||||||||||    
T  50781580 tcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttcttt 50781516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 52362543 - 52362587
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtg 203  Q
    |||| ||||||||||||||||||||||||| || |||||| ||||    
T  52362543 tcacattattttttactttatctctctattgctttggttttcgtg 52362587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 45529256 - 45529167
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagtt 248  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||| |||||  ||||||| ||||||    
T  45529256 tcacattattttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaataagtt 45529167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 30136026 - 30135943
Alignment:
Q  158 ttcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    ||||| ||| |||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||| |||||  |||||||    
T  30136026 ttcacattactttttactttatctctttattactatggtttccgtgtcaataccacttctttctttgtaaaatatggttgtcaa 30135943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 1633900 - 1633810
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||| || ||||||||||||||||||| | |||  ||||||| |||||||    
T  1633900 tcacattattttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttg 1633810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 7956017 - 7955927
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| ||||||||||||||||||||| |||||||||||| | || ||||||||||||||||||| |||||  ||||||| |||||||    
T  7956017 tcacattactttttactttatctctctattgctatggtttccgcgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 7955927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 11017866 - 11017956
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| |||||||||||||||||||||||||  ||| |||||| || || ||||||||||||||||||| |||||| ||||||| |||||||    
T  11017866 tcacattattttttactttatctctctattgttatcgtttccatgccaataccacttttttctttgtaaaatatagttgtcaaataagttg 11017956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 16966846 - 16966935
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagtt 248  Q
    |||| ||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||||||||| | |||  ||||||| ||||||    
T  16966846 tcacattattttctactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagtt 16966935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 32843943 - 32843862
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||| | |||  ||||||| |||||||    
T  32843943 tttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttg 32843862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 11658010 - 11657921
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| |||||| ||||||||||||||| ||||||||||||| ||  |||||||||||||||||| ||||| |||||||| |||||||    
T  11658010 tcacattactttttattttatctctctattattatggtttccgtgccaa-accacttttttctttgtaaaatatgattgtcaaataagttg 11657921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 36110199 - 36110289
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| |||||||||||||||||||||  |||||||| |||| || ||||||||||||||||||| |||||  ||||||| |||||||    
T  36110199 tcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 36110289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 37783972 - 37783891
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||||||| ||| | ||||||||||| |||||| |||||||||||| |||||  ||||||| |||||||    
T  37783972 tttttactttatctctctattgctaggatttccgtgtcaataccacctttttctttgtaaaatatggttgtcaaataagttg 37783891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 7592910 - 7593001
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccactt-ttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||| || |||| ||| || | ||| |||||||| |||||||    
T  7592910 tcacattattttttactttatctctctattgctatggtttccgtgtcaataccatttattttttttataaagtatgattgtcaaataagttg 7593001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 34591340 - 34591415
Alignment:
Q  174 ctttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||||||||||| | |||  ||||||| |||||||    
T  34591340 ctttatctctttattgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttg 34591415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 40739923 - 40739850
Alignment:
Q  158 ttcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatat 232  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||| || ||||| ||||||||||||| |||||    
T  40739923 ttcacattattttttactttatctctctattgttatggtttccgtgccaatacca-ttttttctttgtaaaatat 40739850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 41521029 - 41521102
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatat 232  Q
    |||| |||||||||||||||||||  |||| |||||||||| |||||| ||||||| ||||||||||| |||||    
T  41521029 tcacattattttttactttatctcgttattgctatggtttctgtgtcaataccactattttctttgtaaaatat 41521102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 7478841 - 7478922
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaa 241  Q
    |||| ||||||||||| ||||||||||||| |||||||||||||| || ||| || |||||||||||| | ||| ||||||||    
T  7478841 tcacattattttttaccttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaattatgattgtcaa 7478922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 35564350 - 35564440
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| |||||||||||||||||| |||||| ||||  |||| ||| || ||||||||||||||||||| | |||  ||||||| |||||||    
T  35564350 tcacattattttttactttatctatctattgctataatttctgtgccaataccacttttttctttgtaaagtatggttgtcaaataagttg 35564440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 32847688 - 32847607
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagtt 248  Q
    ||||||||||||| ||||||||  | ||||||||||| || ||||||||||||||||||| | |||  ||||||| ||||||    
T  32847688 ttttttactttatttctctattgttgtggtttccgtggcaataccacttttttctttgtaaagtatggttgtcaaataagtt 32847607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 7586172 - 7586083
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| |||||||||||||||||||||||||  |||| |||||||| || | | || |||||||||||| | |||| ||||||| |||||||    
T  7586172 tcacattattttttactttatctctctattgatatgttttccgtgccaatgctac-tttttctttgtaaattatagttgtcaaataagttg 7586083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 13971199 - 13971252
Alignment:
Q  173 actttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    ||||||||||| |||| |||||||||||||| || ||| |||||||||||||||    
T  13971199 actttatctctatattgctatggtttccgtgccaatactacttttttctttgta 13971252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 38234075 - 38234112
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtg 203  Q
    |||||||||||||||||||||||||| |||||||||||    
T  38234075 attttttactttatctctctattactttggtttccgtg 38234112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 1366666 - 1366718
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttt 216  Q
    |||||||||||||||||||| |||| ||||| ||||||| ||| |||||||||    
T  1366666 ttattttttactttatctctttattgctatgatttccgtatcaataccacttt 1366718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 41159899 - 41159832
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||| ||||||||||||||||||||||||| || |||||| ||||  | ||||  |||||||||||||    
T  41159899 tcacattattttttactttatctctctattgctttggttttcgtgcaaatacctattttttctttgta 41159832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 1871624 - 1871535
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| |||||||| ||||||||||||||||  |||||||||||||  | ||| || |||||||||||| | |||  ||||||| |||||||    
T  1871624 tcacattatttttcactttatctctctattgttatggtttccgtgcgaatacaac-tttttctttgtaaattatggttgtcaaataagttg 1871535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 6968234 - 6968153
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||| ||||||  |||||||||||| ||| ||| |||||||| |||||| | |||  |||| ||||||||||    
T  6968234 ttttttactttatctgtctattgttatggtttccgtatcaatactactttttt-tttgtaaattatggttgtaaattaagttg 6968153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 33589240 - 33589151
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||||| |||  ||||||||||||| || || || |||||| |||||| | ||  |||||||| |||||||    
T  33589240 tcacattattttttactttatctctccattgttatggtttccgtgccaatatca-ttttttttttgtaaagtacgattgtcaaataagttg 33589151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 36531661 - 36531715
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttt 218  Q
    |||||||||||||||||||||||||  |||| |||||||| || ||| |||||||    
T  36531661 ttattttttactttatctctctattgttatgatttccgtgccaatactacttttt 36531715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 888257 - 888176
Alignment:
Q  169 ttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaa-tataattgtcaattaagttg 249  Q
    ||||| ||||||||||||||||| |||||| ||||||| || |  |||||||||| || || |||| ||||||| |||||||    
T  888257 ttttattttatctctctattactttggttttcgtgtcaatatctattttttctttataaaattatagttgtcaaataagttg 888176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 4994442 - 4994486
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtg 203  Q
    |||| |||||||||||||||||||||||||  | |||||||||||    
T  4994442 tcacattattttttactttatctctctattgatttggtttccgtg 4994486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 11547539 - 11547472
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  11547539 tcacattattttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgta 11547472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 3610971 - 3610881
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||  || |||| |||||||    
T  3610971 tcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatggttatcaaataagttg 3610881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 34504081 - 34504171
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| |||| |||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||| |||||||| |||||||    
T  34504081 tcacattacttttcactttatctctctattgctatggtttccgtgtcaataccaattttttctttgtaaaatatgattgtcaaataagttg 34504171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 5327593 - 5327511
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||| | |||  ||||||| |||||||    
T  5327593 ttttttactttatctctctcttgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaataagttg 5327511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 14986746 - 14986664
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||| |||| |||||||||||||| || ||||||||||||||||||| | ||| |||||||| |||||||    
T  14986746 ttttttactttatctctttattgctatggtttccgtgccaataccacttttttctttgtaaagtatgattgtcaaataagttg 14986664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 30036797 - 30036714
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||||||| | |||||||||||||| || ||||| ||||||||||||| | ||| |||||||| |||||||    
T  30036797 attttttactttatctctctaatgctatggtttccgtgccaataccatttttttctttgtaaagtatgattgtcaaataagttg 30036714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 2075461 - 2075371
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| |||||||||||||||||||||||||  ||| ||||||||| || ||||||||||||||||||| | |||  ||||||| |||||||    
T  2075461 tcacattattttttactttatctctctattgttatagtttccgtgccaataccacttttttctttgtaaattatggttgtcaaataagttg 2075371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 2777326 - 2777238
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagtt 248  Q
    |||| ||| ||||||||| ||||||||||| ||||||||||||||  | || |||||||||||||||| |||||||||||||| ||||||    
T  2777326 tcacattactttttactt-atctctctattgctatggtttccgtgctaatatcacttttttctttgtaaaatataattgtcaaataagtt 2777238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 249
Target Start/End: Original strand, 335129 - 335212
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||||||| |||||||||||  ||| |||||||||||||| || ||| ||||||||||||||| | ||| |||||||| |||||||    
T  335129 ttatttttaactttatctct--attgctatggtttccgtgccaatactacttttttctttgtaaattatgattgtcaaataagttg 335212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 4820312 - 4820387
Alignment:
Q  159 tcactttattttttactttatctctctat--tactatggtttccgtgtcattaccacttttttctttgtacaatat 232  Q
    |||| ||||||||||||||||||||||||  |  |||||||| |||| || ||||||||||||||||||| |||||    
T  4820312 tcacattattttttactttatctctctattgttatatggttttcgtgccaataccacttttttctttgtaaaatat 4820387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 13658893 - 13658952
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttt 218  Q
    |||| ||||||||||||| |||||||||||  |||||||||||||||| ||| |||||||    
T  13658893 tcacattattttttacttgatctctctattgatatggtttccgtgtcaatactacttttt 13658952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 22341177 - 22341095
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||||||||| ||||||||||||| ||  ||| || |||||||||||| | |||  ||||||| |||||||    
T  22341177 attttttactttatctctctattgctatggtttccgtctctatactac-tttttctttgtaaattattgttgtcaaataagttg 22341095  T

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Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 30152533 - 30152451
Alignment:
Q  166 attttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagtt 248  Q
    ||||||||||||||||||||| | |||||||||||||  || ||||| |||||| |||||| | |||  ||||||| ||||||    
T  30152533 attttttactttatctctctaatgctatggtttccgtaccaataccatttttttatttgtaaagtatggttgtcaaataagtt 30152451  T

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Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 3199021 - 3199080
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttt 218  Q
    |||| |||||||| | ||||||||| |||| ||||||||||||||||| ||| |||||||    
T  3199021 tcacattatttttcattttatctctatattgctatggtttccgtgtcaatactacttttt 3199080  T

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Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 10335620 - 10335659
Alignment:
Q  167 ttttttactttatctctctattactatggtttccgtgtca 206  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  10335620 ttttttactttctctctctattactttggtttccgtgtca 10335659  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 14693262 - 14693181
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtca 240  Q
    |||| |||||||||||||||||||||| || || |||||||||||  | ||||   |||||||||||| | |||| ||||||    
T  14693262 tcacattattttttactttatctctctgttgctttggtttccgtgcaaatacctactttttctttgtaaattatatttgtca 14693181  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 35213571 - 35213491
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtc 239  Q
    |||| ||| ||||||||||||||||||||| || |||||| ||||  | |||||  |||||||||||| | ||| ||||||    
T  35213571 tcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatgattgtc 35213491  T

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Target: scaffold0471 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 68 - 158
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||| |||||||||||||||||||||  |||||||| |||| || ||||||||||||||||||| |||||  ||||||| |||||||    
T  68 tcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaataagttg 158  T

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Target: scaffold0687 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 2258 - 2349
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccactt-ttttctttgtacaatataattgtcaattaagttg 249  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||| || |||| ||| || | ||| |||||||| |||||||    
T  2258 tcacattattttttactttatctctctattgctatggtttccgtgtcaataccatttattttttttataaagtatgattgtcaaataagttg 2349  T

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Target: scaffold0449 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 9273 - 9354
Alignment:
Q  168 tttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaattaagttg 249  Q
    ||||||||||||||||||||| ||||  |||||||| || |||||||||||||||| || |||||  ||||||| |||||||    
T  9273 tttttactttatctctctattgctataatttccgtgccaataccacttttttctttataaaatatggttgtcaaataagttg 9354  T

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Target: scaffold0321 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 19708 - 19770
Alignment:
Q  170 tttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatat 232  Q
    ||||||||||||| ||||| |||||||||| || ||| ||||||||||||||||||| |||||    
T  19708 tttactttatctccctatttctatggtttctgtatcaataccacttttttctttgtaaaatat 19770  T

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Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 122897 - 122974
Alignment:
Q  164 ttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtcaat 242  Q
    |||||||||||||||| |||||||| |||||||||||||| || ||||| |||||| |||||| |||||  ||||||||    
T  122897 ttattttttactttatttctctattgctatggtttccgtgccaataccaatttttt-tttgtaaaatatggttgtcaat 122974  T

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Target: scaffold0416 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 6919 - 6966
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtca 206  Q
    |||| |||||||||||||| ||||||||||| | ||||||||||||||    
T  6919 tcacattattttttactttctctctctattaatttggtttccgtgtca 6966  T

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Target: scaffold0010 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 134313 - 134246
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgta 226  Q
    |||| |||||||||||||||||||| ||||  | |||||| ||||||| ||||  |||||||||||||    
T  134313 tcacattattttttactttatctctttattgttttggttttcgtgtcaatacctattttttctttgta 134246  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 38486 - 38566
Alignment:
Q  159 tcactttattttttactttatctctctattactatggtttccgtgtcattaccacttttttctttgtacaatataattgtc 239  Q
    |||| ||| ||||||||||||||||||||| || |||||| ||||  | |||||  |||||||||||| | |||| |||||    
T  38486 tcacgttactttttactttatctctctattgctttggttttcgtgcgaataccaactttttctttgtaaattatagttgtc 38566  T

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