View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9612A_low_154 (Length: 247)
Name: NF9612A_low_154
Description: NF9612A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9612A_low_154 |
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Alignment Details
Target: chr6 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 26 - 235
Target Start/End: Original strand, 33206413 - 33206622
Alignment:
| Q |
26 |
ttgattggtttgtgaataattttttcaatccagaaactgttatgttgtgtttactctcttaaacattaaaatccaccactctagtttttaatgctacgta |
125 |
Q |
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| T |
33206413 |
ttgattggtttgtgaataattttttcaatccagaaactgttatgttgtgtttactctcttaaacattaaaatccaccactctagtttttaatgctaagta |
33206512 |
T |
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| Q |
126 |
tgatgtttgaggtttacccccaatgaggcagcttgtgaattcagaaatttataaactcaaatgaaaagagagtggatatggaagaggactaaactcatac |
225 |
Q |
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| T |
33206513 |
tgatgtttgaggtttacccccaatgaggcagcttgtgaattcagaaatttataaactcaaatgaaaagagagtggatgtggaagaggactaaactcatac |
33206612 |
T |
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| Q |
226 |
aatagagtat |
235 |
Q |
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|||||||||| |
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| T |
33206613 |
aatagagtat |
33206622 |
T |
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