View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9612A_low_156 (Length: 247)

Name: NF9612A_low_156
Description: NF9612A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9612A_low_156
NF9612A_low_156
[»] chr7 (72 HSPs)
chr7 (11-236)||(12465200-12465425)
chr7 (17-236)||(13147418-13147637)
chr7 (11-236)||(12372161-12372386)
chr7 (11-236)||(32433529-32433754)
chr7 (11-236)||(8851099-8851324)
chr7 (11-236)||(12322870-12323095)
chr7 (11-236)||(11067355-11067580)
chr7 (11-236)||(16999320-16999548)
chr7 (32-229)||(12127124-12127321)
chr7 (70-236)||(20620173-20620339)
chr7 (71-236)||(14180398-14180563)
chr7 (17-236)||(46386038-46386253)
chr7 (66-236)||(20214034-20214204)
chr7 (71-236)||(20586239-20586404)
chr7 (75-236)||(10277215-10277375)
chr7 (71-236)||(24269947-24270112)
chr7 (11-195)||(47974760-47974944)
chr7 (12-119)||(43276685-43276792)
chr7 (11-175)||(12754553-12754716)
chr7 (12-117)||(18074588-18074693)
chr7 (32-133)||(44374833-44374934)
chr7 (32-133)||(44383698-44383799)
chr7 (11-123)||(58353-58465)
chr7 (12-100)||(19283079-19283167)
chr7 (11-101)||(14160796-14160886)
chr7 (71-193)||(15095637-15095759)
chr7 (11-119)||(19195615-19195725)
chr7 (71-193)||(48807325-48807448)
chr7 (65-229)||(33002055-33002211)
chr7 (71-183)||(14218895-14219008)
chr7 (71-183)||(35771441-35771554)
chr7 (11-108)||(32160140-32160237)
chr7 (71-193)||(15140143-15140265)
chr7 (71-193)||(8135238-8135359)
chr7 (70-200)||(25943041-25943171)
chr7 (71-183)||(4071759-4071872)
chr7 (71-171)||(16078281-16078382)
chr7 (11-123)||(8488034-8488146)
chr7 (71-193)||(13698638-13698761)
chr7 (11-123)||(8513693-8513805)
chr7 (71-191)||(12557853-12557973)
chr7 (71-192)||(15623950-15624070)
chr7 (60-119)||(4690652-4690711)
chr7 (32-119)||(38299752-38299841)
chr7 (71-152)||(10658851-10658932)
chr7 (68-141)||(13744655-13744728)
chr7 (71-175)||(15289052-15289157)
chr7 (113-193)||(13132363-13132443)
chr7 (32-101)||(13744469-13744540)
chr7 (16-86)||(16214511-16214581)
chr7 (12-101)||(15119248-15119337)
chr7 (71-193)||(11054642-11054765)
chr7 (32-89)||(14156353-14156410)
chr7 (71-108)||(29052182-29052219)
chr7 (32-101)||(25943289-25943360)
chr7 (32-101)||(37539470-37539541)
chr7 (66-125)||(36704566-36704625)
chr7 (32-123)||(8930725-8930817)
chr7 (71-117)||(16250222-16250268)
chr7 (141-191)||(41284963-41285013)
chr7 (71-108)||(16550005-16550042)
chr7 (71-108)||(16615620-16615657)
chr7 (60-117)||(43745662-43745719)
chr7 (32-101)||(13315041-13315112)
chr7 (71-119)||(18955334-18955382)
chr7 (193-236)||(25942358-25942401)
chr7 (138-179)||(36685212-36685253)
chr7 (71-119)||(3287748-3287796)
chr7 (72-143)||(14928290-14928362)
chr7 (72-143)||(15351756-15351828)
chr7 (71-119)||(18990851-18990899)
chr7 (71-119)||(20252182-20252230)
[»] scaffold0737 (2 HSPs)
scaffold0737 (11-236)||(4654-4879)
scaffold0737 (75-193)||(5821-5941)
[»] chr6 (42 HSPs)
chr6 (11-236)||(7827859-7828084)
chr6 (11-236)||(19655171-19655396)
chr6 (11-236)||(23150227-23150452)
chr6 (11-236)||(18703451-18703680)
chr6 (11-236)||(18709386-18709615)
chr6 (12-236)||(27125419-27125642)
chr6 (71-236)||(15890712-15890877)
chr6 (71-221)||(27329981-27330131)
chr6 (71-221)||(27390721-27390871)
chr6 (72-171)||(24267801-24267900)
chr6 (11-89)||(17318106-17318184)
chr6 (11-119)||(20410452-20410560)
chr6 (71-189)||(18928614-18928733)
chr6 (71-226)||(19235021-19235175)
chr6 (74-195)||(18585733-18585854)
chr6 (71-229)||(28948468-28948627)
chr6 (71-226)||(30673402-30673550)
chr6 (70-189)||(19401028-19401147)
chr6 (160-226)||(19167926-19167992)
chr6 (11-101)||(31734729-31734819)
chr6 (71-175)||(31731904-31732009)
chr6 (70-132)||(27572121-27572183)
chr6 (71-132)||(15998880-15998941)
chr6 (32-101)||(19825447-19825516)
chr6 (32-91)||(25922033-25922092)
chr6 (32-123)||(10446217-10446310)
chr6 (71-119)||(12041620-12041668)
chr6 (71-193)||(23501601-23501724)
chr6 (71-174)||(24550168-24550271)
chr6 (44-101)||(23431420-23431477)
chr6 (32-101)||(13285770-13285841)
chr6 (75-115)||(29625191-29625231)
chr6 (161-226)||(18259262-18259328)
chr6 (71-141)||(19167853-19167923)
chr6 (71-108)||(15173453-15173490)
chr6 (32-89)||(34140415-34140474)
chr6 (32-89)||(34153031-34153090)
chr6 (60-118)||(21683064-21683122)
chr6 (71-108)||(15900654-15900691)
chr6 (72-172)||(19772667-19772767)
chr6 (66-119)||(23658093-23658146)
chr6 (32-117)||(29045277-29045363)
[»] chr4 (44 HSPs)
chr4 (11-236)||(25091540-25091765)
chr4 (11-236)||(53630414-53630639)
chr4 (11-236)||(10356376-10356601)
chr4 (11-236)||(42875684-42875909)
chr4 (11-236)||(19610211-19610436)
chr4 (11-236)||(16998412-16998637)
chr4 (49-241)||(11425825-11426017)
chr4 (71-236)||(15115109-15115274)
chr4 (71-229)||(37019564-37019722)
chr4 (75-236)||(6633541-6633701)
chr4 (75-236)||(46001535-46001695)
chr4 (11-119)||(12424230-12424338)
chr4 (11-101)||(40230328-40230418)
chr4 (11-108)||(10694185-10694282)
chr4 (11-108)||(10907951-10908048)
chr4 (11-119)||(25513855-25513963)
chr4 (71-191)||(9924085-9924206)
chr4 (11-119)||(9639014-9639122)
chr4 (11-101)||(19022366-19022456)
chr4 (71-188)||(14549695-14549812)
chr4 (71-193)||(9870444-9870568)
chr4 (71-189)||(11478653-11478772)
chr4 (71-184)||(19434559-19434672)
chr4 (158-224)||(26921708-26921774)
chr4 (71-152)||(15613061-15613142)
chr4 (11-101)||(44023547-44023633)
chr4 (71-174)||(21144-21248)
chr4 (32-119)||(33186907-33186994)
chr4 (60-117)||(2424376-2424433)
chr4 (71-152)||(51993532-51993613)
chr4 (70-117)||(35811375-35811422)
chr4 (32-123)||(10273383-10273476)
chr4 (71-108)||(15008978-15009015)
chr4 (71-108)||(21062656-21062693)
chr4 (44-101)||(33243267-33243324)
chr4 (32-101)||(13165154-13165225)
chr4 (71-127)||(14186955-14187010)
chr4 (71-108)||(40620547-40620584)
chr4 (71-119)||(16296942-16296990)
chr4 (161-226)||(27028642-27028708)
chr4 (160-193)||(9638939-9638972)
chr4 (71-108)||(14186067-14186104)
chr4 (71-123)||(13847201-13847253)
chr4 (71-119)||(32466194-32466242)
[»] chr2 (45 HSPs)
chr2 (14-239)||(5031072-5031297)
chr2 (14-236)||(24780783-24781005)
chr2 (11-236)||(24436535-24436760)
chr2 (11-236)||(9975816-9976041)
chr2 (11-223)||(22251388-22251600)
chr2 (11-236)||(2523687-2523912)
chr2 (32-236)||(17307373-17307577)
chr2 (71-236)||(24516073-24516238)
chr2 (71-236)||(40912207-40912372)
chr2 (60-236)||(19201189-19201365)
chr2 (75-236)||(37270587-37270747)
chr2 (108-236)||(27484514-27484642)
chr2 (11-185)||(27852605-27852776)
chr2 (71-193)||(25142133-25142256)
chr2 (121-236)||(36841151-36841266)
chr2 (71-195)||(357809-357933)
chr2 (71-193)||(3539766-3539889)
chr2 (73-195)||(1383545-1383667)
chr2 (11-100)||(21369316-21369405)
chr2 (44-195)||(22501897-22502050)
chr2 (44-195)||(22509831-22509984)
chr2 (11-83)||(36841267-36841339)
chr2 (12-101)||(14179669-14179758)
chr2 (11-95)||(31521197-31521281)
chr2 (11-104)||(20916326-20916419)
chr2 (44-123)||(149474-149553)
chr2 (19-101)||(14183414-14183496)
chr2 (71-171)||(44072509-44072609)
chr2 (71-188)||(22259974-22260090)
chr2 (71-174)||(5986125-5986229)
chr2 (71-174)||(25046066-25046170)
chr2 (86-183)||(18390229-18390326)
chr2 (15-101)||(24718041-24718127)
chr2 (33-123)||(23801496-23801592)
chr2 (71-193)||(19358820-19358943)
chr2 (140-194)||(24884399-24884453)
chr2 (71-108)||(21080969-21081006)
chr2 (71-108)||(25184204-25184241)
chr2 (66-172)||(14694276-14694383)
chr2 (138-193)||(18388257-18388312)
chr2 (79-108)||(18357975-18358004)
chr2 (75-108)||(21915639-21915672)
chr2 (44-91)||(12626399-12626447)
chr2 (71-119)||(21315476-21315524)
chr2 (71-119)||(21335266-21335314)
[»] chr1 (41 HSPs)
chr1 (11-236)||(19676598-19676823)
chr1 (14-236)||(21045992-21046214)
chr1 (11-236)||(20633571-20633799)
chr1 (44-236)||(16058287-16058478)
chr1 (71-236)||(42912936-42913101)
chr1 (71-226)||(21168831-21168985)
chr1 (11-101)||(41225394-41225484)
chr1 (11-101)||(41226647-41226737)
chr1 (71-229)||(51324398-51324556)
chr1 (71-175)||(13302849-13302954)
chr1 (11-119)||(12710871-12710979)
chr1 (71-195)||(24723351-24723475)
chr1 (11-119)||(28476674-28476782)
chr1 (13-123)||(20588638-20588748)
chr1 (13-123)||(20593176-20593286)
chr1 (14-193)||(22350646-22350820)
chr1 (71-195)||(7051922-7052046)
chr1 (71-193)||(7320594-7320716)
chr1 (32-123)||(8306606-8306697)
chr1 (71-220)||(4595853-4595995)
chr1 (71-174)||(42697732-42697836)
chr1 (71-119)||(51336483-51336531)
chr1 (140-195)||(44822090-44822145)
chr1 (71-152)||(21239049-21239130)
chr1 (68-141)||(45499374-45499446)
chr1 (71-119)||(12327743-12327791)
chr1 (71-108)||(29763632-29763669)
chr1 (71-108)||(46197745-46197782)
chr1 (71-174)||(45755468-45755572)
chr1 (32-119)||(17901754-17901842)
chr1 (40-123)||(34392768-34392853)
chr1 (71-108)||(50001491-50001528)
chr1 (71-123)||(635004-635056)
chr1 (32-101)||(45499564-45499634)
chr1 (70-101)||(22145665-22145696)
chr1 (32-119)||(6834180-6834268)
chr1 (160-193)||(8276079-8276112)
chr1 (160-193)||(38056762-38056795)
chr1 (57-101)||(7703144-7703188)
chr1 (71-107)||(24727383-24727419)
chr1 (32-101)||(35895121-35895192)
[»] chr3 (65 HSPs)
chr3 (11-234)||(22306523-22306746)
chr3 (11-236)||(17044853-17045078)
chr3 (11-236)||(17047013-17047238)
chr3 (11-236)||(17693954-17694179)
chr3 (11-236)||(35354489-35354714)
chr3 (17-236)||(11259318-11259537)
chr3 (12-236)||(17538993-17539217)
chr3 (11-234)||(41172311-41172534)
chr3 (35-245)||(49900608-49900818)
chr3 (11-236)||(40812720-40812941)
chr3 (44-236)||(17518846-17519038)
chr3 (44-236)||(17533708-17533900)
chr3 (71-236)||(40807883-40808048)
chr3 (11-236)||(15931448-15931672)
chr3 (11-220)||(14508749-14508959)
chr3 (71-236)||(44274305-44274470)
chr3 (86-236)||(50348041-50348191)
chr3 (75-236)||(10311415-10311575)
chr3 (71-236)||(10563596-10563760)
chr3 (11-134)||(17541423-17541546)
chr3 (60-193)||(11563654-11563788)
chr3 (71-229)||(19568208-19568366)
chr3 (96-188)||(35064566-35064658)
chr3 (71-191)||(33565018-33565139)
chr3 (11-193)||(45530544-45530725)
chr3 (71-193)||(42323971-42324094)
chr3 (71-217)||(9510916-9511062)
chr3 (71-217)||(9518891-9519037)
chr3 (71-191)||(35960928-35961049)
chr3 (11-78)||(17325561-17325628)
chr3 (71-183)||(13185834-13185947)
chr3 (71-175)||(16050875-16050979)
chr3 (14-101)||(50350759-50350846)
chr3 (11-119)||(14152339-14152447)
chr3 (172-236)||(35064681-35064745)
chr3 (70-193)||(49968858-49968981)
chr3 (44-119)||(15566748-15566823)
chr3 (178-236)||(5200277-5200335)
chr3 (74-172)||(11885560-11885658)
chr3 (32-123)||(14641509-14641600)
chr3 (71-175)||(24177736-24177840)
chr3 (32-92)||(50347596-50347656)
chr3 (88-193)||(37038978-37039085)
chr3 (71-119)||(15446868-15446916)
chr3 (71-112)||(5200243-5200284)
chr3 (71-152)||(12509350-12509431)
chr3 (44-123)||(6159405-6159484)
chr3 (32-123)||(12917265-12917358)
chr3 (71-132)||(36528858-36528919)
chr3 (44-101)||(53646032-53646089)
chr3 (33-101)||(3527117-3527187)
chr3 (70-108)||(22652788-22652826)
chr3 (32-119)||(29907643-29907731)
chr3 (32-119)||(29948809-29948897)
chr3 (32-119)||(29997963-29998051)
chr3 (71-108)||(16979927-16979964)
chr3 (74-174)||(14250085-14250185)
chr3 (71-119)||(17208528-17208576)
chr3 (44-95)||(6820192-6820243)
chr3 (72-172)||(22758835-22758935)
chr3 (70-123)||(54875473-54875526)
chr3 (71-123)||(6156710-6156762)
chr3 (71-123)||(14520446-14520498)
chr3 (146-193)||(22146832-22146880)
chr3 (115-167)||(40957186-40957238)
[»] scaffold0001 (3 HSPs)
scaffold0001 (11-236)||(31881-32106)
scaffold0001 (11-236)||(37188-37413)
scaffold0001 (11-236)||(77574-77799)
[»] scaffold0064 (1 HSPs)
scaffold0064 (11-236)||(58633-58858)
[»] chr8 (59 HSPs)
chr8 (17-232)||(19140656-19140870)
chr8 (13-236)||(42817849-42818072)
chr8 (11-236)||(39935947-39936175)
chr8 (71-245)||(20083638-20083812)
chr8 (60-236)||(5761421-5761596)
chr8 (81-236)||(5082222-5082377)
chr8 (75-236)||(6573060-6573221)
chr8 (71-236)||(6101753-6101918)
chr8 (75-236)||(37292593-37292753)
chr8 (75-236)||(6202664-6202824)
chr8 (12-119)||(18761452-18761559)
chr8 (124-245)||(20178581-20178704)
chr8 (71-225)||(20397510-20397656)
chr8 (11-111)||(23943766-23943866)
chr8 (11-101)||(21579146-21579236)
chr8 (11-101)||(36306019-36306109)
chr8 (14-123)||(22258249-22258358)
chr8 (71-229)||(22532132-22532290)
chr8 (71-229)||(22536817-22536975)
chr8 (71-239)||(31722493-31722661)
chr8 (12-101)||(18834444-18834533)
chr8 (60-193)||(20022029-20022155)
chr8 (71-193)||(45469219-45469342)
chr8 (71-193)||(22317911-22318033)
chr8 (11-101)||(29762808-29762898)
chr8 (71-183)||(36727038-36727151)
chr8 (71-175)||(17906849-17906953)
chr8 (75-229)||(39694281-39694435)
chr8 (60-119)||(4380606-4380665)
chr8 (32-119)||(22208273-22208360)
chr8 (71-174)||(19700109-19700213)
chr8 (32-91)||(12037125-12037184)
chr8 (71-152)||(23419411-23419493)
chr8 (71-183)||(23899987-23900100)
chr8 (32-101)||(22345186-22345257)
chr8 (32-101)||(22356846-22356917)
chr8 (71-174)||(23948211-23948315)
chr8 (70-175)||(17218649-17218755)
chr8 (32-123)||(22610226-22610319)
chr8 (72-193)||(42265510-42265631)
chr8 (71-108)||(17158963-17159000)
chr8 (71-147)||(22254741-22254818)
chr8 (71-132)||(22583660-22583721)
chr8 (71-108)||(23479097-23479134)
chr8 (71-132)||(23889790-23889851)
chr8 (71-108)||(26454723-26454760)
chr8 (71-107)||(19880838-19880874)
chr8 (75-115)||(34758875-34758915)
chr8 (60-119)||(21514695-21514754)
chr8 (32-100)||(23884192-23884262)
chr8 (70-141)||(36305837-36305908)
chr8 (32-101)||(20879494-20879565)
chr8 (71-118)||(12577885-12577931)
chr8 (120-193)||(3273819-3273893)
chr8 (71-108)||(16198851-16198888)
chr8 (75-108)||(25657518-25657551)
chr8 (71-123)||(21399717-21399769)
chr8 (71-123)||(21794210-21794262)
chr8 (60-132)||(36732401-36732473)
[»] scaffold1283 (1 HSPs)
scaffold1283 (11-236)||(408-633)
[»] scaffold1633 (1 HSPs)
scaffold1633 (12-236)||(1092-1316)
[»] scaffold0077 (2 HSPs)
scaffold0077 (12-236)||(34226-34450)
scaffold0077 (71-152)||(5921-6002)
[»] scaffold0407 (1 HSPs)
scaffold0407 (11-236)||(11215-11439)
[»] scaffold0080 (2 HSPs)
scaffold0080 (16-236)||(21738-21958)
scaffold0080 (11-64)||(58827-58880)
[»] scaffold0111 (2 HSPs)
scaffold0111 (44-229)||(12506-12691)
scaffold0111 (74-236)||(5270-5432)
[»] scaffold0019 (2 HSPs)
scaffold0019 (11-175)||(24071-24235)
scaffold0019 (72-171)||(30023-30122)
[»] scaffold1941 (1 HSPs)
scaffold1941 (71-236)||(25-190)
[»] scaffold0036 (1 HSPs)
scaffold0036 (11-184)||(78125-78298)
[»] chr5 (33 HSPs)
chr5 (44-236)||(21300017-21300209)
chr5 (75-236)||(7484890-7485050)
chr5 (35-236)||(19921525-19921732)
chr5 (71-229)||(20566448-20566598)
chr5 (62-220)||(31622028-31622178)
chr5 (12-119)||(23199148-23199255)
chr5 (11-123)||(21398584-21398696)
chr5 (66-195)||(36508628-36508757)
chr5 (71-189)||(21617928-21618047)
chr5 (71-195)||(31456888-31457012)
chr5 (71-175)||(20469176-20469281)
chr5 (70-189)||(22111762-22111881)
chr5 (11-101)||(26762424-26762514)
chr5 (71-119)||(6551290-6551338)
chr5 (35-123)||(32607280-32607368)
chr5 (71-179)||(10774664-10774771)
chr5 (71-174)||(10954038-10954141)
chr5 (60-194)||(17876132-17876266)
chr5 (70-108)||(266053-266091)
chr5 (32-123)||(16063751-16063844)
chr5 (71-108)||(17011743-17011780)
chr5 (74-119)||(30616618-30616663)
chr5 (32-96)||(8503849-8503913)
chr5 (71-193)||(21405628-21405751)
chr5 (71-152)||(25249828-25249910)
chr5 (71-152)||(25313612-25313694)
chr5 (70-123)||(1627066-1627119)
chr5 (175-224)||(22111715-22111764)
chr5 (71-119)||(18744878-18744926)
chr5 (111-191)||(31251931-31252011)
chr5 (156-195)||(30138059-30138098)
chr5 (60-101)||(14025796-14025837)
chr5 (32-101)||(21504161-21504232)
[»] scaffold1766 (1 HSPs)
scaffold1766 (71-236)||(696-861)
[»] scaffold0241 (2 HSPs)
scaffold0241 (71-236)||(3069-3234)
scaffold0241 (129-236)||(2451-2558)
[»] scaffold0207 (1 HSPs)
scaffold0207 (71-236)||(13392-13557)
[»] scaffold0020 (3 HSPs)
scaffold0020 (71-236)||(168999-169164)
scaffold0020 (67-236)||(143498-143667)
scaffold0020 (11-101)||(174243-174333)
[»] scaffold0334 (1 HSPs)
scaffold0334 (71-236)||(405-570)
[»] scaffold0026 (1 HSPs)
scaffold0026 (71-236)||(146610-146775)
[»] scaffold0047 (1 HSPs)
scaffold0047 (11-229)||(78958-79161)
[»] scaffold0632 (1 HSPs)
scaffold0632 (71-236)||(1052-1217)
[»] scaffold0004 (6 HSPs)
scaffold0004 (60-236)||(328277-328455)
scaffold0004 (70-226)||(72841-72989)
scaffold0004 (70-224)||(75691-75839)
scaffold0004 (32-123)||(73087-73180)
scaffold0004 (70-175)||(110121-110227)
scaffold0004 (32-123)||(75937-76030)
[»] scaffold0956 (1 HSPs)
scaffold0956 (12-154)||(2524-2666)
[»] scaffold0149 (2 HSPs)
scaffold0149 (71-210)||(29573-29711)
scaffold0149 (71-195)||(21539-21663)
[»] scaffold0285 (1 HSPs)
scaffold0285 (58-229)||(19655-19818)
[»] scaffold0113 (1 HSPs)
scaffold0113 (71-197)||(35418-35542)
[»] scaffold0213 (1 HSPs)
scaffold0213 (14-119)||(19211-19316)
[»] scaffold0431 (1 HSPs)
scaffold0431 (11-119)||(5637-5745)
[»] scaffold0037 (3 HSPs)
scaffold0037 (71-229)||(112966-113125)
scaffold0037 (70-189)||(81501-81620)
scaffold0037 (71-229)||(117807-117958)
[»] scaffold0162 (1 HSPs)
scaffold0162 (11-101)||(23832-23922)
[»] scaffold0112 (1 HSPs)
scaffold0112 (71-226)||(2793-2941)
[»] scaffold0230 (1 HSPs)
scaffold0230 (74-195)||(6688-6809)
[»] scaffold0628 (1 HSPs)
scaffold0628 (60-239)||(1047-1226)
[»] scaffold0379 (2 HSPs)
scaffold0379 (11-123)||(10947-11059)
scaffold0379 (70-188)||(10741-10851)
[»] scaffold0107 (1 HSPs)
scaffold0107 (12-91)||(13493-13572)
[»] scaffold0174 (6 HSPs)
scaffold0174 (75-226)||(5167-5310)
scaffold0174 (75-226)||(11287-11430)
scaffold0174 (32-119)||(5458-5545)
scaffold0174 (70-225)||(19605-19759)
scaffold0174 (32-100)||(11639-11707)
scaffold0174 (32-123)||(19856-19947)
[»] scaffold0083 (3 HSPs)
scaffold0083 (71-229)||(10755-10911)
scaffold0083 (71-113)||(5045-5087)
scaffold0083 (71-108)||(1952-1989)
[»] scaffold0802 (1 HSPs)
scaffold0802 (71-191)||(4709-4830)
[»] scaffold0100 (1 HSPs)
scaffold0100 (75-222)||(26638-26779)
[»] scaffold0853 (1 HSPs)
scaffold0853 (12-119)||(2396-2502)
[»] scaffold0203 (1 HSPs)
scaffold0203 (44-119)||(17913-17988)
[»] scaffold0156 (1 HSPs)
scaffold0156 (77-195)||(16532-16650)
[»] scaffold0008 (1 HSPs)
scaffold0008 (71-192)||(135504-135625)
[»] scaffold0056 (1 HSPs)
scaffold0056 (71-183)||(67060-67173)
[»] scaffold0414 (1 HSPs)
scaffold0414 (11-123)||(11100-11212)
[»] scaffold0175 (2 HSPs)
scaffold0175 (71-193)||(8571-8694)
scaffold0175 (161-226)||(18744-18810)
[»] scaffold0125 (1 HSPs)
scaffold0125 (12-91)||(28583-28662)
[»] scaffold0032 (1 HSPs)
scaffold0032 (44-119)||(61821-61896)
[»] scaffold0028 (1 HSPs)
scaffold0028 (72-193)||(3053-3174)
[»] scaffold0848 (1 HSPs)
scaffold0848 (70-193)||(2020-2143)
[»] scaffold0123 (1 HSPs)
scaffold0123 (71-193)||(7205-7329)
[»] scaffold0040 (1 HSPs)
scaffold0040 (71-195)||(106051-106175)
[»] scaffold0251 (1 HSPs)
scaffold0251 (71-188)||(20086-20202)
[»] scaffold0371 (2 HSPs)
scaffold0371 (11-101)||(10386-10476)
scaffold0371 (11-56)||(3941-3986)
[»] scaffold0220 (2 HSPs)
scaffold0220 (71-172)||(19905-20006)
scaffold0220 (160-193)||(13878-13911)
[»] scaffold0074 (1 HSPs)
scaffold0074 (11-104)||(1957-2050)
[»] scaffold0075 (1 HSPs)
scaffold0075 (71-174)||(60843-60947)
[»] scaffold1256 (2 HSPs)
scaffold1256 (60-119)||(2189-2248)
scaffold1256 (11-39)||(2141-2169)
[»] scaffold0516 (3 HSPs)
scaffold0516 (60-119)||(5294-5353)
scaffold0516 (11-39)||(5149-5177)
scaffold0516 (11-39)||(5246-5274)
[»] scaffold0010 (1 HSPs)
scaffold0010 (71-174)||(126305-126407)
[»] scaffold0261 (1 HSPs)
scaffold0261 (158-224)||(6620-6686)
[»] scaffold0395 (1 HSPs)
scaffold0395 (11-56)||(11956-12001)
[»] scaffold0328 (2 HSPs)
scaffold0328 (44-101)||(18613-18670)
scaffold0328 (160-193)||(18731-18764)
[»] scaffold0041 (1 HSPs)
scaffold0041 (76-125)||(5712-5761)
[»] scaffold0071 (1 HSPs)
scaffold0071 (71-119)||(15276-15324)
[»] scaffold0031 (1 HSPs)
scaffold0031 (32-101)||(127302-127373)
[»] scaffold0007 (2 HSPs)
scaffold0007 (71-198)||(158822-158949)
scaffold0007 (71-119)||(18701-18749)
[»] scaffold0859 (1 HSPs)
scaffold0859 (86-193)||(4612-4718)
[»] scaffold0256 (1 HSPs)
scaffold0256 (79-141)||(1855-1917)
[»] scaffold0819 (1 HSPs)
scaffold0819 (71-179)||(5311-5418)
[»] scaffold0671 (1 HSPs)
scaffold0671 (71-119)||(4944-4992)
[»] scaffold0589 (1 HSPs)
scaffold0589 (71-174)||(4333-4437)
[»] scaffold0042 (1 HSPs)
scaffold0042 (71-170)||(29340-29440)
[»] scaffold0002 (1 HSPs)
scaffold0002 (71-174)||(398510-398614)
[»] scaffold0878 (1 HSPs)
scaffold0878 (33-101)||(3383-3452)
[»] scaffold0676 (1 HSPs)
scaffold0676 (44-119)||(2885-2960)
[»] scaffold0003 (1 HSPs)
scaffold0003 (75-174)||(96347-96446)
[»] scaffold0601 (1 HSPs)
scaffold0601 (70-108)||(195-233)
[»] scaffold0515 (1 HSPs)
scaffold0515 (71-108)||(5044-5081)
[»] scaffold0436 (1 HSPs)
scaffold0436 (71-108)||(8975-9012)
[»] scaffold0306 (1 HSPs)
scaffold0306 (71-108)||(5044-5081)
[»] scaffold0180 (1 HSPs)
scaffold0180 (61-193)||(28319-28451)
[»] scaffold0138 (2 HSPs)
scaffold0138 (71-108)||(21112-21149)
scaffold0138 (71-108)||(34127-34164)
[»] scaffold0057 (1 HSPs)
scaffold0057 (71-108)||(69853-69890)
[»] scaffold0577 (1 HSPs)
scaffold0577 (71-179)||(9004-9111)
[»] scaffold0439 (1 HSPs)
scaffold0439 (138-194)||(12323-12379)
[»] scaffold0369 (1 HSPs)
scaffold0369 (32-93)||(15576-15638)
[»] scaffold0151 (1 HSPs)
scaffold0151 (71-186)||(31046-31160)
[»] scaffold0065 (1 HSPs)
scaffold0065 (71-174)||(52544-52648)
[»] scaffold0116 (1 HSPs)
scaffold0116 (71-193)||(35464-35586)
[»] scaffold0505 (1 HSPs)
scaffold0505 (59-101)||(4958-5000)
[»] scaffold0086 (1 HSPs)
scaffold0086 (32-123)||(35145-35238)
[»] scaffold0061 (2 HSPs)
scaffold0061 (32-119)||(14546-14634)
scaffold0061 (32-119)||(23604-23692)
[»] scaffold0058 (1 HSPs)
scaffold0058 (75-108)||(6383-6416)
[»] scaffold0046 (1 HSPs)
scaffold0046 (71-108)||(21777-21814)
[»] scaffold0034 (1 HSPs)
scaffold0034 (71-108)||(29216-29253)
[»] scaffold0017 (1 HSPs)
scaffold0017 (74-119)||(26731-26776)
[»] scaffold0070 (1 HSPs)
scaffold0070 (44-83)||(11193-11232)
[»] scaffold0148 (1 HSPs)
scaffold0148 (38-101)||(8866-8931)
[»] scaffold0411 (1 HSPs)
scaffold0411 (71-159)||(13417-13505)
[»] scaffold0308 (1 HSPs)
scaffold0308 (120-193)||(13370-13443)
[»] scaffold0730 (1 HSPs)
scaffold0730 (36-101)||(6468-6535)
[»] scaffold0625 (1 HSPs)
scaffold0625 (71-119)||(5861-5909)


Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 12465200 - 12465425
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12465200 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 12465299  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12465300 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 12465399  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||| ||||||    
T  12465400 ccgttgaatttgtgtagaattgatgt 12465425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 17 - 236
Target Start/End: Original strand, 13147418 - 13147637
Alignment:
Q  17 agagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataat 116  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  13147418 agagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttatataat 13147517  T
Q  117 tctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttg 216  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13147518 tctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaataaagtagaaaatccgttg 13147617  T
Q  217 aatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||||    
T  13147618 aatttgtgtagaagtgatgt 13147637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 12372386 - 12372161
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12372386 cagagaagagaagaatcttgtgtgaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 12372287  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12372286 tataattctgaaattgagtttagcatgttgcaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 12372187  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
     |||||||||||||||||| ||||||    
T  12372186 tcgttgaatttgtgtagaattgatgt 12372161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 32433529 - 32433754
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32433529 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttg 32433628  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32433629 tataattctgaaattgagtttagcatgttgtaggttgtagttatgtgaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaat 32433728  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
      ||||||||||||||||||||||||    
T  32433729 tagttgaatttgtgtagaagtgatgt 32433754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 8851099 - 8851324
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8851099 cagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 8851198  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  8851199 tataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaaattaggttttgaagttgtaattggttgttaatagagtataaaat 8851298  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    | ||||||||||||||||| ||||||    
T  8851299 ctgttgaatttgtgtagaattgatgt 8851324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 12322870 - 12323095
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12322870 cagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtggaactaactttctctaattctaagttg 12322969  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  12322970 tataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggttttgaagttgtacttggttgttaatagaatagaaaat 12323069  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||| ||||||    
T  12323070 ccgttgaatttgtgtagaattgatgt 12323095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 11067580 - 11067355
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11067580 cagagaagagaagaatattgtgagaagaggagcaatcttatagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttg 11067481  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  11067480 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgatgtagtaattggttgttaatagagtagaaaat 11067381  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
     ||||||||||||| |||||||||||    
T  11067380 tcgttgaatttgtggagaagtgatgt 11067355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 16999548 - 16999320
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattc--taagt 108  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||  |||||    
T  16999548 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctataagt 16999449  T
Q  109 tgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaa-tttgggaattaggttttgaagttgtaattggttgttaatagagtagaa 207  Q
    ||||||||||| |||||||||||||||| || || |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  16999448 tgtataattctgaaattgagtttagcatgttatatgttgtagttatgggaattttgggaattaggttttgaagttgtaatcggttgttaatagagtagaa 16999349  T
Q  208 aatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||| ||||||    
T  16999348 aatccgttgaatttgtgtagaattgatgt 16999320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 32 - 229
Target Start/End: Original strand, 12127124 - 12127321
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagttt 131  Q
    ||||||||||||||||| |||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12127124 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 12127223  T
Q  132 agcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 229  Q
    | ||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  12127224 aacatgttgtaggttttagttatggaaatttgggaattaggttttgaagttgtaattggttgttaagagagtagaaaattcgttgaatttgtgtagaa 12127321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 20620339 - 20620173
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  20620339 ttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaatt 20620240  T
Q  170 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20620239 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20620173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 14180398 - 14180563
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14180398 taaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 14180497  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14180498 tgttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 14180563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 17 - 236
Target Start/End: Original strand, 46386038 - 46386253
Alignment:
Q  17 agagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataat 116  Q
    |||||| ||||||||||||||| |||||||||||||| || | ||||    || |||| ||||||| |||||||||||||||||||||||||||||||||    
T  46386038 agagaataatcttgtgagaagatgagcaatcttgtagtgttcgatca----atctaagataagggtaggactaactttctctaattctaagttgtataat 46386133  T
Q  117 tctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttg 216  Q
    ||| ||||||||||||  || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  46386134 tctgaaattgagtttaatatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaattccgttg 46386233  T
Q  217 aatttgtgtagaagtgatgt 236  Q
    ||||||||||||| ||||||    
T  46386234 aatttgtgtagaattgatgt 46386253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 66 - 236
Target Start/End: Complemental strand, 20214204 - 20214034
Alignment:
Q  66 taatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttggg 165  Q
    |||| ||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  20214204 taatctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 20214105  T
Q  166 aattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  20214104 aattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtacaattgatgt 20214034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 20586404 - 20586239
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||| || || ||    
T  20586404 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaccatgttgtaggttgtagttatgggaattaggaaacta 20586305  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20586304 gggtttgaagttgcaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20586239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 10277375 - 10277215
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggtt 174  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||    
T  10277375 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 10277276  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  10277275 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 10277215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 24269947 - 24270112
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||   | || ||| ||||||||||    
T  24269947 taaggtaagggtgggattaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaagttgggaatta 24270046  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| || ||||||    
T  24270047 ggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgtacaattgatgt 24270112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 195
Target Start/End: Original strand, 47974760 - 47974944
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||| | |||   |||  ||||||||||||| ||||||||||||||||||||||||||    
T  47974760 cagagaagaaaagaatcttgtgagaagaggagcaatattgtagagttcgatcgattaacctaaggtaagggtgagactaactttctctaattctaagttg 47974859  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 195  Q
    ||| ||||| ||| ||  |||| ||  | ||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||    
T  47974860 tatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgtt 47974944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 43276685 - 43276792
Alignment:
Q  12 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |  |||||    
T  43276685 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaataatgggttgt 43276784  T
Q  112 ataattct 119  Q
    ||||||||    
T  43276785 ataattct 43276792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 12754553 - 12754716
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||   || |||  |||||||||||||||||||||||||||||||||||||||     
T  12754553 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcatcgat-taacctaaggtaagggtgggactaactttctctaattctaagtta 12754651  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttt 175  Q
    ||| ||||| ||| ||  |||| ||  | |||||||||||| |||| ||||||||||||| ||||    
T  12754652 tatgattctgaaactggatttaacaggtggtaggttgtagtaatggaaatttgggaattatgttt 12754716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 18074588 - 18074693
Alignment:
Q  12 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgt 111  Q
    |||| |||||||||||||||||||||| || |||||||||||||||| | |||||||||||||||||| |||||| ||||||||||||||||||||| ||    
T  18074588 agaggagagaagaatcttgtgagaagaagatcaatcttgtagagtccgaccatctaatttaaggtaagagtgggattaactttctctaattctaagtggt 18074687  T
Q  112 ataatt 117  Q
    ||||||    
T  18074688 ataatt 18074693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 44374934 - 44374833
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagttt 131  Q
    ||||||||||||||||| |||||| || |||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  44374934 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagttt 44374835  T
Q  132 ag 133  Q
    ||    
T  44374834 ag 44374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 44383799 - 44383698
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagttt 131  Q
    ||||||||||||||||| |||||| || |||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  44383799 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagttt 44383700  T
Q  132 ag 133  Q
    ||    
T  44383699 ag 44383698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 58353 - 58465
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||| ||||||||||||||||||| |||||||||||  |  ||||    
T  58353 cagagaagagaagaatcttgtgagaagaggaacaatcttgtagattccgatcatctaatctaaggtaagggtgggactagctttctctaataatgggttg 58452  T
Q  111 tataattctaaaa 123  Q
    ||| |||||||||    
T  58453 tatgattctaaaa 58465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 19283167 - 19283079
Alignment:
Q  12 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaa 100  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  19283167 agagaagagaagaatcttgtgagaaaaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaa 19283079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 14160796 - 14160886
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| ||||    
T  14160796 cagagaagagaagaatcttgtgtgaagaggagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaaccttctttaat 14160886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 15095637 - 15095759
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||| ||| |||||||||||| |||| ||||| |||||||| |||| ||  ||||||||||||||| ||||||||||||||||    
T  15095637 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 15095735  T
Q  170 aggttttgaagttgtaattggttg 193  Q
    |||||| |||||||||||| ||||    
T  15095736 aggtttagaagttgtaattagttg 15095759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 19195725 - 19195615
Alignment:
Q  11 cagagaagagaagaatcttgtgagaa--gaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagt 108  Q
    |||||||||||||||||||||||||   ||||| |||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||  | |||    
T  19195725 cagagaagagaagaatcttgtgagataggaggaacaatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaataatgagt 19195626  T
Q  109 tgtataattct 119  Q
    |||||||||||    
T  19195625 tgtataattct 19195615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 48807325 - 48807448
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || |||| ||  |||||| |||||||| ||||||||||||||||    
T  48807325 taaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtagattgtagttttgggaatttgggaatt 48807424  T
Q  170 aggttttgaagttgtaattggttg 193  Q
     |||   |||||||||||||||||    
T  48807425 tggtacagaagttgtaattggttg 48807448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 65 - 229
Target Start/End: Complemental strand, 33002211 - 33002055
Alignment:
Q  65 ctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgg 164  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||  |||| |       ||||||||||| |||||||||||    
T  33002211 ctaacttaaggtaagggtcggactaactttctctaattctaagttgtatgattctgaaattggatttaac-------aggttgtagtt-tgggaatttgg 33002120  T
Q  165 gaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 229  Q
    |||||||| || |||||||||||||||||||   | |||||| |||| |||||||| ||||||||    
T  33002119 gaattagggttagaagttgtaattggttgttgtaatagtagagaatctgttgaattggtgtagaa 33002055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 14218895 - 14219008
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||| |||| ||  ||||||||||||||| || |||||| ||||||    
T  14218895 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgagaattttggaatt 14218994  T
Q  170 aggttttgaagttg 183  Q
    |||||| |||||||    
T  14218995 aggtttagaagttg 14219008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 35771441 - 35771554
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| ||||| || |||| ||  ||||||||||||||| ||| ||||||||||||    
T  35771441 taaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatt 35771540  T
Q  170 aggttttgaagttg 183  Q
    |||||| |||||||    
T  35771541 aggtttagaagttg 35771554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 32160140 - 32160237
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagt 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||   |||  ||||||||||||  ||||||||||||||||||||||||    
T  32160140 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtaagactaactttctctaattctaagt 32160237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 15140265 - 15140143
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||| ||||| ||||||| ||| |||||||||||| |||| ||||| |||||||| |||| ||  ||||||||||||||| ||||||||||||||||    
T  15140265 taaggtatgggtgagactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 15140167  T
Q  170 aggttttgaagttgtaattggttg 193  Q
    ||||||  ||||||||||||||||    
T  15140166 aggtttaaaagttgtaattggttg 15140143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 8135238 - 8135359
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||| ||||||| ||| ||||| |||||| |||| ||||| ||||||| |||| ||  ||||||||||||||| | |||||||| ||||||    
T  8135238 taaggtaagggtgagactaaccttcactaatcctaagt-gtatgattctgaaattgaatttaacaggttgtaggttgtagttttaggaatttgagaatta 8135336  T
Q  171 ggttttgaagttgtaattggttg 193  Q
    ||||| |||||||||||||||||    
T  8135337 ggtttagaagttgtaattggttg 8135359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 25943171 - 25943041
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||| |||| ||||||| ||||||||||||||| |  ||||||||||||| ||||||| |||||||| |||| | ||||   | || |||||||| ||||    
T  25943171 ttaatgtaacggtgggattaactttctctaattttgggttgtataattctgaaattgaatttagcatgttgttgtttgtgaatttgtgaatttggaaatt 25943072  T
Q  170 aggttttgaagttgtaattggttgttaatag 200  Q
    |||||||||||| ||||||||||||||||||    
T  25943071 aggttttgaagtcgtaattggttgttaatag 25943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 4071872 - 4071759
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||| |||||||  |||| ||  ||||||||||||||| |||| ||||| |||||    
T  4071872 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggatttgagaatt 4071773  T
Q  170 aggttttgaagttg 183  Q
    |||||| |||||||    
T  4071772 aggtttagaagttg 4071759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 16078382 - 16078281
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | ||||| || |||| ||  |||||| |||||||| ||||||||||||||||    
T  16078382 taaggtaagggtgggactaactttctctaattctaagtggtataattatgaaaatcgaatttaacaagttgtagtttgtagttttgggaatttgggaatt 16078283  T
Q  170 ag 171  Q
    ||    
T  16078282 ag 16078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 8488034 - 8488146
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||| || |||||||||| ||| | |||   |||  |||||||||||||||||||||||||||||||  |  ||||    
T  8488034 cagagaagagaagaatcttgtgagaagaagaacaatcttgtaaagttcgatcgattaacctaaggtaagggtgggactaactttctctaataatgggttg 8488133  T
Q  111 tataattctaaaa 123  Q
    |||||||||||||    
T  8488134 tataattctaaaa 8488146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 13698638 - 13698761
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||||||||||| ||||||||||||| ||||| |||||||  ||||||| |||||||  |||  ||| || |||||||||||| ||| ||||||||||||    
T  13698638 taaggtaagggtaggactaactttctttaattttaagttgattaattctgaaaattggatttgacatgttttaggttgtagttttggaaatttgggaatt 13698737  T
Q  170 aggttttgaagttgtaattggttg 193  Q
    ||| || |||||||||||||||||    
T  13698738 agggttagaagttgtaattggttg 13698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 8513693 - 8513805
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| | || |||||||||| ||| | |||   |||  |||||||||||||||||||||||||||||||  |  ||||    
T  8513693 cagagaagagaagaatcttgtgagaataagaacaatcttgtaaagttcgatcgattaacctaaggtaagggtgggactaactttctctaataatgggttg 8513792  T
Q  111 tataattctaaaa 123  Q
    |||||||||||||    
T  8513793 tataattctaaaa 8513805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 12557973 - 12557853
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa-ttgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||| |||| ||| ||||||| ||| |||||||||||| |||| ||||||||| |||| |||| ||  ||||||||||||||| ||||||||||| ||||    
T  12557973 taagataagagtgagactaaccttcactaattctaagt-gtatgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttggaaatt 12557875  T
Q  170 aggttttgaagttgtaattggt 191  Q
    |||||| ||||||| |||||||    
T  12557874 aggtttagaagttgaaattggt 12557853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 192
Target Start/End: Complemental strand, 15624070 - 15623950
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||| ||||||| |||  ||||||||||| |||| ||||| ||||||| ||||  |  |||||| |||||||| |||||||||| ||||||    
T  15624070 taaggtaagggtgagactaaccttcaataattctaagt-gtatgattctgaaattgaatttaataggttgtagtttgtagttttgggaatttgagaatta 15623972  T
Q  171 ggttttgaagttgtaattggtt 192  Q
    ||||| | ||||||||||||||    
T  15623971 ggtttaggagttgtaattggtt 15623950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 4690652 - 4690711
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4690652 atcatctaacctaaggtaaaggtgggactaactttctctaattctaagttgtataattct 4690711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 38299841 - 38299752
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||||||||||| |||||||||||   ||||||||||| ||||||||||||||||||| |||||||||||  |  |||||||||||||    
T  38299841 gagaagaggagcaagcttgtagagtctgaaatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattct 38299752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 10658851 - 10658932
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagtt 152  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||||| ||||||  |||| ||| ||||||| |||||||    
T  10658851 taaggtaagggtgggactaaccttctttaattctaagttgtatgattctgaaattggatttaacattttgtaggatgtagtt 10658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 13744655 - 13744728
Alignment:
Q  68 atttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgt 141  Q
    |||||| |||||||||||| ||||||||||||||| || ||||||||||||| ||||| |||||||||| ||||    
T  13744655 atttaacgtaagggtgggattaactttctctaattttaggttgtataattctgaaattaagtttagcatgttgt 13744728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 15289157 - 15289052
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||| ||||||||||||||||||||  ||||| ||| |||||||  |||| ||  ||||||||||||||| || | ||||| |||||    
T  15289157 taaggtaagggtgggaccaactttctctaattctaagtattataactctgaaaattggatttaacaagttgtaggttgtagttttgaggatttgagaatt 15289058  T
Q  170 aggttt 175  Q
    ||||||    
T  15289057 aggttt 15289052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 13132363 - 13132443
Alignment:
Q  113 taattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttg 193  Q
    ||||||| ||||||| |||| ||  |||||||| |||||| |||||||||||||||||||||| ||||||||||| |||||    
T  13132363 taattctgaaattgaatttaacaagttgtaggtcgtagttttgggaatttgggaattaggtttagaagttgtaatcggttg 13132443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 13744469 - 13744540
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||| |||||||||||   ||||||||||| ||||||||||||||||||| |||||||||||    
T  13744469 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 13744540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 16214581 - 16214511
Alignment:
Q  16 aagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtggga 86  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||   |||  ||||||||||||||||    
T  16214581 aagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtggga 16214511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 15119248 - 15119337
Alignment:
Q  12 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||||||||| |||||||||||||||||||||||||||||   |||   |||  |||||||||||| |||||||| |||| ||||    
T  15119248 agagaagagaagaatattgtgagaagaggagcaatcttgtagagtttgatcgattaacctaaggtaagggtaggactaaccttctttaat 15119337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 11054765 - 11054642
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttggg-aat 168  Q
    ||||||||||||||||||||| |||  | ||||||||| || | ||||| |||||||| |||| ||  |||||||||||| || |||||||||||| |||    
T  11054765 taaggtaagggtgggactaaccttcaatgattctaagt-gtttgattctgaaaattgaatttaacaggttgtaggttgtaattttgggaatttgggaaat 11054667  T
Q  169 taggttttgaagttgtaattggttg 193  Q
    |||| ||  ||||||||||||||||    
T  11054666 tagggttataagttgtaattggttg 11054642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 14156353 - 14156410
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggacta 89  Q
    |||||||||||||||||||||||  || || ||||||| |||||||||||||||||||    
T  14156353 gagaagaggagcaatcttgtagataccgataatctaatctaaggtaagggtgggacta 14156410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 29052182 - 29052219
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29052182 taaggtaagggtgggactaactttctctaattctaagt 29052219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 25943360 - 25943289
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||| || ||| |||||||||||   ||||||||||| ||||||||||||||||||| |||||||||||    
T  25943360 gagaagatgaacaaacttgtagagtctgtaatcatctaatataaggtaagggtgggactagctttctctaat 25943289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 37539541 - 37539470
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||| |||||||||||   ||||||||||| ||| ||||||||||||||||| |||| ||||    
T  37539541 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaagtaagggtgggactaacattctataat 37539470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 36704566 - 36704625
Alignment:
Q  66 taatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaatt 125  Q
    |||| ||||||||||||||||||||| |||| ||||| |||||||| ||||||| |||||    
T  36704566 taatctaaggtaagggtgggactaaccttctttaattttaagttgtgtaattctgaaatt 36704625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 8930725 - 8930817
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    |||||||||||||| ||| ||| ||||  ||||||||||| |||||||||||||||||||  ||||||||||  |  ||||||| |||||||||    
T  8930725 gagaagaggagcaagctt-tagcgtccggaatcatctaatctaaggtaagggtgggactacatttctctaataatgggttgtatgattctaaaa 8930817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 16250222 - 16250268
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataatt 117  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||    
T  16250222 taaggtaagggtgggactaactttctctaataatgagttgtataatt 16250268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 41285013 - 41284963
Alignment:
Q  141 taggttgtagttatgggaatttgggaattaggttttgaagttgtaattggt 191  Q
    |||||||||||| | |||||||||||||||||||| |||||| ||||||||    
T  41285013 taggttgtagttttaggaatttgggaattaggtttagaagttataattggt 41284963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 16550005 - 16550042
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    |||||||||| |||||||||||||||||||||||||||    
T  16550005 taaggtaaggttgggactaactttctctaattctaagt 16550042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 16615657 - 16615620
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    |||||||||| |||||||||||||||||||||||||||    
T  16615657 taaggtaaggttgggactaactttctctaattctaagt 16615620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 43745719 - 43745662
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 117  Q
    |||||||||  ||||||||||||||||||| |||||||||||  | ||||||||||||    
T  43745719 atcatctaacctaaggtaagggtgggactagctttctctaataatgagttgtataatt 43745662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 13315041 - 13315112
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||| |||||||| |||||||||||   ||| ||||||| ||||||||||||| ||||| |||||||||||    
T  13315041 gagaataggagcaagcttgtagagtctgaaataatctaatctaaggtaagggtgagactatctttctctaat 13315112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 18955382 - 18955334
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||||| |||| ||||||||||||||||||||||||  |||||||||    
T  18955382 taaggtaaaggtgagactaactttctctaattctaagtgttataattct 18955334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 25942401 - 25942358
Alignment:
Q  193 gttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||| ||||||||||||| || ||||||    
T  25942401 gttaatagagtagaaaatccattgaatttgtgtacaattgatgt 25942358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 36685212 - 36685253
Alignment:
Q  138 ttgtaggttgtagttatgggaatttgggaattaggttttgaa 179  Q
    ||||||||||||||| ||| ||||||||||||||| ||||||    
T  36685212 ttgtaggttgtagttttggaaatttgggaattagggtttgaa 36685253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 3287796 - 3287748
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||| ||||| |||||||||||  || |||||||||||||    
T  3287796 taaggtaagggtgagactagctttctctaataataggttgtataattct 3287748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 14928290 - 14928362
Alignment:
Q  72 aaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtag 143  Q
    |||||||||||||||||||| |||  |||||||||||| | ||||||| |||||||  |||| ||| ||||||    
T  14928290 aaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 14928362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 15351756 - 15351828
Alignment:
Q  72 aaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtag 143  Q
    |||||||||||||||||||| |||  |||||||||||| | ||||||| |||||||  |||| ||| ||||||    
T  15351756 aaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 15351828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 18990899 - 18990851
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||||| ||||  |||||||||||||||||||||||  |||||||||    
T  18990899 taaggtaaaggtgatactaactttctctaattctaagtgttataattct 18990851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 20252182 - 20252230
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||||||||| |||||| |||||||||||  | ||||||||||||||    
T  20252182 taaggtaagggtaggactagctttctctaataatgagttgtataattct 20252230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 206; Significance: 1e-113; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 4654 - 4879
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4654 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtcggactaactttctctaattctaagttg 4753  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4754 tataattctgaaattgagtttagcatgttgtaggtcgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 4853  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||||||||||    
T  4854 ccgttgaatttgtgtagaagtgatgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 5821 - 5941
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgg-gaattagg 172  Q
    ||||| ||| |||||||||||  |||||||||||||| ||||||| |||||||  |||  ||  |||| |||||||||| |  ||||||||  |||||||    
T  5821 gtaagtgtgagactaactttccttaattctaagttgtgtaattctgaaaattggatttgacaggttgtgggttgtagttttcagaatttggaaaattagg 5920  T
Q  173 ttttgaagttgtaattggttg 193  Q
     || ||||||| |||||||||    
T  5921 gttagaagttgaaattggttg 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-113; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 7828084 - 7827859
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7828084 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 7827985  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7827984 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 7827885  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    | ||||||||||||||||| ||||||    
T  7827884 cggttgaatttgtgtagaattgatgt 7827859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 19655171 - 19655396
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19655171 cagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttg 19655270  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19655271 tataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaat 19655370  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||| ||||||    
T  19655371 ccgttgaatttgtgtagaattgatgt 19655396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 23150227 - 23150452
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23150227 cagagaagagaaaaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 23150326  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23150327 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaat 23150426  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
      ||||||||||||||||| ||||||    
T  23150427 ttgttgaatttgtgtagaattgatgt 23150452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 18703680 - 18703451
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18703680 cagagaagagaagaatcttatgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttg 18703581  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgt----aattggttgttaatagagtaga 206  Q
    ||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||    ||||||||||||||||||||||    
T  18703580 tataattctgaaattgagtttagaatgttgtaggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtaga 18703481  T
Q  207 aaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||| ||||||||||||    
T  18703480 aaatccgttgaatttgtatagaagtgatgt 18703451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 18709615 - 18709386
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18709615 cagagaagagaagaatcttatgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttg 18709516  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgt----aattggttgttaatagagtaga 206  Q
    ||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||    ||||||||||||||||||||||    
T  18709515 tataattctgaaattgagtttagaatgttgtaggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtaga 18709416  T
Q  207 aaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||| ||||||||||||    
T  18709415 aaatccgttgaatttgtatagaagtgatgt 18709386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 12 - 236
Target Start/End: Original strand, 27125419 - 27125642
Alignment:
Q  12 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgt 111  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27125419 agagaagaga-gaattttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgt 27125517  T
Q  112 ataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatc 211  Q
    |||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  27125518 ataagtctaaaattgagattagcatgttgtaggttgtagttatgggaatttgggacttaggttttgaagttgtaattagttgttaatagagtagaaaatc 27125617  T
Q  212 cgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||| ||||||||||||    
T  27125618 cgttgaatttgtatagaagtgatgt 27125642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 15890712 - 15890877
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||| ||  |||||||||||||    
T  15890712 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttttgttaatttgggaatta 15890811  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15890812 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 15890877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 27329981 - 27330131
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  27329981 taaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaatta 27330080  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27330081 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27330131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 27390721 - 27390871
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  27390721 taaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaatta 27390820  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27390821 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27390871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 72 - 171
Target Start/End: Complemental strand, 24267900 - 24267801
Alignment:
Q  72 aaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattag 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  24267900 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattag 24267801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 17318106 - 17318184
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggacta 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17318106 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta 17318184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 20410452 - 20410560
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| | || |||||||||||  |  ||||    
T  20410452 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtgcgatcatctaatttaaggtaagggtggaaatagctttctctaataatgggttg 20410551  T
Q  111 tataattct 119  Q
    |||||||||    
T  20410552 tataattct 20410560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 71 - 189
Target Start/End: Complemental strand, 18928733 - 18928614
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| |||| ||  |||||||||| |||| ||||||||||| ||||    
T  18928733 taaggtaagggtaggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 18928634  T
Q  170 aggttttgaagttgtaattg 189  Q
    |||||| |||||||||||||    
T  18928633 aggtttagaagttgtaattg 18928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 19235175 - 19235021
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||| ||||||||||| ||||||||||||||| || ||||||||||||| ||||||| ||||| || |||| | ||||   | || |||||||||| |||    
T  19235175 taagttaagggtgggattaactttctctaattttaggttgtataattctgaaattgattttaggatgttgttgtttgtgaatttgtgaatttggga-tta 19235077  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 226  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||||| |||||||    
T  19235076 ggttttgaagtcgtaattggttgttaataaagtagaaaatccattgaacttgtgta 19235021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 18585854 - 18585733
Alignment:
Q  74 ggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggt 173  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||| ||  |||| ||  | ||||||||||||| ||| ||||| ||||||||||    
T  18585854 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 18585755  T
Q  174 tttgaagttgtaattggttgtt 195  Q
    || |||||||||||||||||||    
T  18585754 ttagaagttgtaattggttgtt 18585733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 28948627 - 28948468
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgta-gttatgggaatttgggaatt 169  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||  |||| ||  | ||| |||||| ||| | | ||||||||||||    
T  28948627 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaagtggtaagttgtaggttttagaaatttgggaatt 28948528  T
Q  170 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 229  Q
    |||||| |||||||||||||||||||   | ||||||||||  |||||||| ||||||||    
T  28948527 aggtttagaagttgtaattggttgttttaatagtagaaaatatgttgaattggtgtagaa 28948468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 226
Target Start/End: Original strand, 30673402 - 30673550
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||| | ||||||||||||||||  ||| | ||||        |||||| |||||||    
T  30673402 taaggtaagggtgggattaactttctctaattttaggttgtataattttgaaattgagtttagcatgatgttgtttgt--------gaattttggaatta 30673493  T
Q  171 ggttttgaagttgtaa-ttggttgttaatagagtagaaaatccgttgaatttgtgta 226  Q
    ||||||||| | |||| |||||||||||||||||||||||| | |||||||||||||    
T  30673494 ggttttgaattagtaatttggttgttaatagagtagaaaattcattgaatttgtgta 30673550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 19401147 - 19401028
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaat 168  Q
    |||||||||||||||||||||| ||| |||||||||||| |||| ||||| |||||||| |||| ||  ||||||||||||||| |||||||||| ||||    
T  19401147 ttaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgagaat 19401049  T
Q  169 taggttttgaagttgtaattg 189  Q
    |||||||  ||||||||||||    
T  19401048 taggtttataagttgtaattg 19401028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 19167926 - 19167992
Alignment:
Q  160 tttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 226  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  19167926 tttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgta 19167992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 31734819 - 31734729
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| | |||   |||  ||||||||||||||||||||| |||| ||||    
T  31734819 cagagaagaaaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaat 31734729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 31731904 - 31732009
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||||||||| ||||||||||  ||||||||| |||||||  |||  ||  ||||||||||||||| |||| ||||| |||||    
T  31731904 taaggtaagggtgggactaactttctccaattctaagtgttataattctgaaaattggatttgacaagttgtaggttgtagttttggggatttgagaatt 31732003  T
Q  170 aggttt 175  Q
    ||||||    
T  31732004 aggttt 31732009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 27572121 - 27572183
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagttta 132  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||| ||||    
T  27572121 ttaaggtaagggtgagactaactttctctaattctaagtcgtataattctgaaattgaattta 27572183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 15998941 - 15998880
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagttta 132  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||  |||||||    
T  15998941 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagttta 15998880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 19825447 - 19825516
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||||||||||| |||||| || |||||||||| ||||||||||||| ||||| |||||||||||    
T  19825447 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagactagctttctctaat 19825516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 25922092 - 25922033
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaac 91  Q
    ||||||||||||||||| |||||| || |||||||||| |||||||||||||||||||||    
T  25922092 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaac 25922033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 10446310 - 10446217
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    |||||||||||||| | |||||||||   ||||||||||| ||||||||||||||||||| |||||||||||  |  ||||||| |||||||||    
T  10446310 gagaagaggagcaagcatgtagagtctgaaatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaa 10446217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 12041620 - 12041668
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  12041620 taaggtaagggtgggactaaccttctttaattctaagttgtataattct 12041668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 23501724 - 23501601
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaa-tttgggaat 168  Q
    ||||||||||||| ||||||| |||  ||||||||| | || ||||||| |||| ||| |||| ||  ||||||||||||||| | |||| |||||||||    
T  23501724 taaggtaagggtgagactaaccttcaataattctaaat-gtttaattctgaaaactgaatttaacaagttgtaggttgtagtttttggaaatttgggaat 23501626  T
Q  169 taggttttgaagttgtaattggttg 193  Q
    ||||||| |||||||||||| ||||    
T  23501625 taggtttagaagttgtaatttgttg 23501601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 24550168 - 24550271
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||  |||| ||||| |||||||| ||||||| ||||||  |||| ||| ||||||| ||||||| |||  ||||  ||||||    
T  24550168 taaggtaagggtgggactaaacttctttaattgtaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagttttggagatttaagaatta 24550267  T
Q  171 ggtt 174  Q
    ||||    
T  24550268 ggtt 24550271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 23431420 - 23431477
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||||| |||| ||||    
T  23431420 aatcttgtagagtccgatcatctaatctaaggtaagcgtgggactaaccttctttaat 23431477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 13285841 - 13285770
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||| |||||||||||   || |||||||| ||||||||||||||||||||| |||| ||||    
T  13285841 gagaagaggagcaagcttgtagagtctgaaaccatctaatctaaggtaagggtgggactaaccttctataat 13285770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 29625231 - 29625191
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataa 115  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  29625231 gtaagggtgggactaactttctctaattctacgttgtataa 29625191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 18259262 - 18259328
Alignment:
Q  161 ttgggaattaggttttga-agttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 226  Q
    |||||||||||||||||| | |||||||| ||||||||| || |||||||||| | |||||||||||    
T  18259262 ttgggaattaggttttgagaattgtaattagttgttaattgaatagaaaatccatagaatttgtgta 18259328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 19167853 - 19167923
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgt 141  Q
    |||||||||||||| | ||||||| ||||||  || ||||||||||||| | |||||||||||||| ||||    
T  19167853 taaggtaagggtggaattaactttgtctaatattaggttgtataattctgatattgagtttagcatgttgt 19167923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 15173453 - 15173490
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    |||||||| |||||||||||||||||||||||||||||    
T  15173453 taaggtaatggtgggactaactttctctaattctaagt 15173490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 34140415 - 34140474
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggacta 89  Q
    |||||||||||||| ||||||||||    ||||||||||| |||||||||||||||||||    
T  34140415 gagaagaggagcaagcttgtagagtttgtaatcatctaatctaaggtaagggtgggacta 34140474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 34153031 - 34153090
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggacta 89  Q
    |||||||||||||| ||||||||||    ||||||||||| |||||||||||||||||||    
T  34153031 gagaagaggagcaagcttgtagagtttgtaatcatctaatctaaggtaagggtgggacta 34153090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 21683064 - 21683122
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattc 118  Q
    |||||||||  ||||||||||||||||||| |||||||||||  |  ||||||||||||    
T  21683064 atcatctaacctaaggtaagggtgggactagctttctctaataatgggttgtataattc 21683122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 15900654 - 15900691
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  15900654 taaggtaagggtgagaccaactttctctaattctaagt 15900691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 19772667 - 19772767
Alignment:
Q  72 aaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||||||||||||| | |||  |||||||||||  | ||||||| |||||||  |||| ||| ||||||||| ||||| || | ||||||||||||    
T  19772667 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgaggatttgggaatta 19772765  T
Q  171 gg 172  Q
    ||    
T  19772766 gg 19772767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 23658146 - 23658093
Alignment:
Q  66 taatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||| ||||||||||||||||||| ||||| |||||  || |||||||||||||    
T  23658146 taatctaaggtaagggtgggactagctttccctaataataggttgtataattct 23658093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 29045363 - 29045277
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 117  Q
    |||||||||||||| ||| |||||| |  ||||||||| | ||||||||||||| ||||| |||||||||||  |  |||||||||||    
T  29045363 gagaagaggagcaagctt-tagagttcggaatcatctattctaaggtaagggtgagactagctttctctaataatgggttgtataatt 29045277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 25091765 - 25091540
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25091765 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 25091666  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25091665 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 25091566  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||| ||||||    
T  25091565 ccgttgaatttgtgtagaattgatgt 25091540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 53630414 - 53630639
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53630414 cagagaaaagaagaatcttgtgagaagaggaacaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 53630513  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53630514 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 53630613  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
     |||||||||||||||||| ||||||    
T  53630614 tcgttgaatttgtgtagaattgatgt 53630639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 10356376 - 10356601
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||| | ||||||||||||||| |||||||||||||||||||||||||||||    
T  10356376 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcttttaatttaaggtaaggttgggactaactttctctaattctaagttg 10356475  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10356476 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggtagttaatagagtagaaaat 10356575  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||| ||||||    
T  10356576 ccgttgaatttgtgtagaattgatgt 10356601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 42875909 - 42875684
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  || |||||||||||||||||||||||||||||||| | |||||||||||||    
T  42875909 cagagaagagaagaatcttgtgagaagaggagcaattttgtagagtctgattatctaatttaaggtaagggtgggactaactttatataattctaagttg 42875810  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  42875809 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaaataggttttgaagttgtaattgattgttaatagagtagaaaat 42875710  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||| ||||||    
T  42875709 ccgttgaatttgtgtagaattgatgt 42875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 19610436 - 19610211
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||| ||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  19610436 cagaaaagagaagaatcttgtgagaagaggagtaatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttctctaattttaagttg 19610337  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  19610336 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattaagttttgacgttgtaattggttgttaatagagtagaaaat 19610237  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||||| ||||||||||||| ||||||    
T  19610236 ccgttaaatttgtgtagaattgatgt 19610211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 16998637 - 16998412
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||||||||||||| | ||||   ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  16998637 cagagaagagaagaatcttgtgagaagagaaacaattccgtagagtccgatcatctaatttaaggtaagagtgagactaactttctctaattctaagttg 16998538  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16998537 tataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 16998438  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
     |||||||||||||||| | ||||||    
T  16998437 tcgttgaatttgtgtagtattgatgt 16998412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 49 - 241
Target Start/End: Complemental strand, 11426017 - 11425825
Alignment:
Q  49 tgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgt 148  Q
    ||||||| || ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  11426017 tgtagagaccgatcatcatatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgt 11425918  T
Q  149 agttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgtccatc 241  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  11425917 agttatgggaatttgggaattaggttttgaaattgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgttcatc 11425825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 15115274 - 15115109
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15115274 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 15115175  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
      ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  15115174 ttttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 15115109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 37019722 - 37019564
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||| ||||||    
T  37019722 taaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgagaatta 37019623  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 229  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37019622 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaa 37019564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 75 - 236
Target Start/End: Original strand, 6633541 - 6633701
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggtt 174  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||    
T  6633541 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 6633640  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  6633641 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 6633701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 75 - 236
Target Start/End: Original strand, 46001535 - 46001695
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggtt 174  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||    
T  46001535 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 46001634  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  46001635 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 46001695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 12424230 - 12424338
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||  |  ||||    
T  12424230 cagagaagagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttg 12424329  T
Q  111 tataattct 119  Q
    |||||||||    
T  12424330 tataattct 12424338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 40230418 - 40230328
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||    
T  40230418 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcaatcatctaatctaaggtaagggtgggactaactttctttaat 40230328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 10694185 - 10694282
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagt 108  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  10694185 cagagaagagaagaatctcgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagt 10694282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 10907951 - 10908048
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagt 108  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  10907951 cagagaagagaagaatctcgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagt 10908048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 25513963 - 25513855
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||||||| |||||||||||  | |||||    
T  25513963 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtctgatcatctaatctaaggtaatggtgggactagctttctctaataatgagttg 25513864  T
Q  111 tataattct 119  Q
    |||||||||    
T  25513863 tataattct 25513855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 9924206 - 9924085
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||| |||| ||  |||||||||| |||| ||||||||||| ||||    
T  9924206 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 9924107  T
Q  170 aggttttgaagttgtaattggt 191  Q
    |||||| |||||||||||||||    
T  9924106 aggtttagaagttgtaattggt 9924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 9639122 - 9639014
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||||||| |||||||||||  | |||||    
T  9639122 cagagaagagaagaatcttgtgagaagaggagaaatcttgtagagtccgataatctaatctaaggtaagggtgggactagctttctctaataatgagttg 9639023  T
Q  111 tataattct 119  Q
    | |||||||    
T  9639022 tgtaattct 9639014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 19022456 - 19022366
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||    
T  19022456 cagagaagagaataatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaaaggtgagactaactttctctaat 19022366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 71 - 188
Target Start/End: Complemental strand, 14549812 - 14549695
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||| |||||||||||||||||||||||||||||  |||| ||| ||  |||| ||  | ||||||||||||| ||| |||||||||||||    
T  14549812 taaggtaagggtgagactaactttctctaattctaagttgtatgtttctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaatta 14549713  T
Q  171 ggttttgaagttgtaatt 188  Q
    ||||| ||||||||||||    
T  14549712 ggtttagaagttgtaatt 14549695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 9870444 - 9870568
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttggg-aat 168  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||| |||||||  |||  |||  |||||||||||||| |||||||||||| |||    
T  9870444 taagctaagggtgggactaactttccataattctaagttgtataattctgaaaattggatttgacatgatgtaggttgtagttttgggaatttgggaaat 9870543  T
Q  169 taggttttgaagttgtaattggttg 193  Q
    |||| || |||||||||||||||||    
T  9870544 tagggttagaagttgtaattggttg 9870568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 71 - 189
Target Start/End: Original strand, 11478653 - 11478772
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||||||| |||||||| |||| ||  |||||| ||| |||| ||||||||||| ||||    
T  11478653 taaggtaagggtgagactaacttcctctaattctaagtggtataattctgaaaattgaatttaacaagttgtagattgaagttttgggaatttggaaatt 11478752  T
Q  170 aggttttgaagttgtaattg 189  Q
    |||||| ||| |||||||||    
T  11478753 aggtttagaacttgtaattg 11478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 19434559 - 19434672
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||  |||| ||  | ||||||||||||| | | |||||||||||||    
T  19434559 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatta 19434658  T
Q  171 ggttttgaagttgt 184  Q
     |||| ||||||||    
T  19434659 agtttagaagttgt 19434672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 26921708 - 26921774
Alignment:
Q  158 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 224  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  26921708 aatttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccaatgaatttgtg 26921774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 15613142 - 15613061
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagtt 152  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||  |||| ||| ||||||| |||||||    
T  15613142 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattggatttaacatgttgtaggatgtagtt 15613061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 44023547 - 44023633
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||    ||| ||||||||||||| ||||||| |||| ||||    
T  44023547 cagagaagagaagaatcttgtgaaaagaggagcaatcttgtagagtccgatc----aatctaaggtaagggtgcgactaaccttctttaat 44023633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 21248 - 21144
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||||||||| || ||||||| |||| |||||||||||||||||||||| | |||||| |||| ||| ||||||||||||||| || | ||||| |||||    
T  21248 taaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaatt 21149  T
Q  170 aggtt 174  Q
    |||||    
T  21148 aggtt 21144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 33186994 - 33186907
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||| |||||||||| ||||||||||| |||||||||||||||||| ||||| ||||| |||||||||||  |  |||||||||||||    
T  33186994 gagaggaggagcaattttgtagagtccgatcatctaatttaaggtaggggtgagactagctttctctaataatgggttgtataattct 33186907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 2424376 - 2424433
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 117  Q
    |||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||    
T  2424376 atcatctaacctaaggtaagggtgagactaactttctctaattctaagttgtataatt 2424433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 51993613 - 51993532
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagtt 152  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||||| ||||||  |||| ||| ||||||| |||||||    
T  51993613 taaggtaagggtgggactaaccttctttaattctaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagtt 51993532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 35811375 - 35811422
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataatt 117  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35811375 ttaaggtaagggtgggactaactttctctaattctaagtggtataatt 35811422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 10273476 - 10273383
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    |||||||||||||| |||||||||||   |||| |||||| ||||||||||||||||||| |||||||||||  |  ||||||| |||||||||    
T  10273476 gagaagaggagcaagcttgtagagtctgaaatcgtctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaa 10273383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 15009015 - 15008978
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15009015 taaggtaagggtgggactaactttctctaattctaagt 15008978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 21062693 - 21062656
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21062693 taaggtaagggtgggactaactttctctaattctaagt 21062656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 33243267 - 33243324
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||||| |||| ||||    
T  33243267 aatcttgtagagtcccatcatctaatctaaggtaagggtgagactaacattctttaat 33243324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 13165225 - 13165154
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaa--tcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||| ||||||||||||||  ||| | ||| ||||||||||||||||||||| |||| ||||    
T  13165225 gagaagaggagcaaacttgtagagtccaaattcaaccaatctaaggtaagggtgggactaaccttctttaat 13165154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 14187010 - 14186955
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattga 127  Q
    |||||||||||||||| |||||||||||||||||||| ||||| ||||| |||||||    
T  14187010 taaggtaagggtgggagtaactttctctaattctaag-tgtatgattctgaaattga 14186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 40620584 - 40620547
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    |||||||||||||||| |||||||||||||||||||||    
T  40620584 taaggtaagggtgggaataactttctctaattctaagt 40620547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 16296990 - 16296942
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||||||||| |||||||||||  | ||||||||||||||    
T  16296990 taaggtaagggtgggactagctttctctaataatgagttgtataattct 16296942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 27028708 - 27028642
Alignment:
Q  161 ttgggaattaggttttga-agttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 226  Q
    |||||||||||||||||| | ||| |||| ||||||||| || |||||||||| | |||||||||||    
T  27028708 ttgggaattaggttttgagaattgcaattagttgttaattgaatagaaaatccatagaatttgtgta 27028642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 9638972 - 9638939
Alignment:
Q  160 tttgggaattaggttttgaagttgtaattggttg 193  Q
    |||||||||||||||| |||||||||||||||||    
T  9638972 tttgggaattaggtttagaagttgtaattggttg 9638939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 14186104 - 14186067
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  14186104 taaggtaagggtgggagtaactttctttaattctaagt 14186067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 13847253 - 13847201
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  13847253 taaggtaagggtgagactagctttctctaataatgggttgtataattctaaaa 13847201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 32466194 - 32466242
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||| ||||||  |||| |||||||||||||| |||||||    
T  32466194 taaggtaagggtgagactaatcttctttaattctaagttgtgtaattct 32466242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 5031072 - 5031297
Alignment:
Q  14 agaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtat 113  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5031072 agaagagaagaatcttgtgagaagatgagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtat 5031171  T
Q  114 aattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccg 213  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  5031172 aattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaattcg 5031271  T
Q  214 ttgaatttgtgtagaagtgatgtcca 239  Q
    ||||||||||||||||||||||||||    
T  5031272 ttgaatttgtgtagaagtgatgtcca 5031297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 24780783 - 24781005
Alignment:
Q  14 agaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24780783 agaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtat 24780882  T
Q  114 aattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccg 213  Q
    |||||| ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24780883 aattctgaaattgagtttagcatgaagtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccg 24780982  T
Q  214 ttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||||    
T  24780983 ttgaatttgtgtagaagtgatgt 24781005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 24436760 - 24436535
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  24436760 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaactttctcgaattctaagttg 24436661  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  24436660 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaattagttgttaatagagtagaaaat 24436561  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||| ||||||    
T  24436560 ccgttgaatttgtgtagaattgatgt 24436535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 9976041 - 9975816
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9976041 cagagaagagaagaatcttatgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagggttggactaactttctctaattctaagttg 9975942  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  9975941 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagacaat 9975842  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||| ||||||||||||||| ||||||    
T  9975841 ccgctgaatttgtgtagaattgatgt 9975816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 22251388 - 22251600
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  22251388 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtctgatcatctaatttaaggtaagggtgaaactaattttctctaattctaagttg 22251487  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22251488 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 22251587  T
Q  211 ccgttgaatttgt 223  Q
    | |||||||||||    
T  22251588 ctgttgaatttgt 22251600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 2523687 - 2523912
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2523687 cagaaaagagaaaaatcttgtgagaagaggagcaatcttgtaaagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 2523786  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||| ||| |||||||||||| |||||||||||||| ||||||||||| || |||||||||||| |||||||||||||||||    
T  2523787 tataattcttaaattgagtttaacatgttgtaggttgtatttatgggaatttggaaattaggtttttaaattgtaattggttattaatagagtagaaaat 2523886  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
     ||||||||||||| |||| ||||||    
T  2523887 tcgttgaatttgtgcagaattgatgt 2523912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 32 - 236
Target Start/End: Complemental strand, 17307577 - 17307373
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagttt 131  Q
    ||||||||||||||  | |||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17307577 gagaagaggagcaaaatcgtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 17307478  T
Q  132 agcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagt 231  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  17307477 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaatt 17307378  T
Q  232 gatgt 236  Q
    |||||    
T  17307377 gatgt 17307373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 24516238 - 24516073
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  24516238 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 24516139  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24516138 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 24516073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 40912372 - 40912207
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40912372 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 40912273  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  40912272 ggttttgaagttgtagttggttgttaatagagtagaaaattcgttgaatttgtgtagaaatgatgt 40912207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 60 - 236
Target Start/End: Original strand, 19201189 - 19201365
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaa 159  Q
    |||||||||  |||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||| ||||    
T  19201189 atcatctaacctaagttaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttatcatgttgtaggttgtagttataggaa 19201288  T
Q  160 tttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  19201289 tttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgggtagaattgatgt 19201365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 37270747 - 37270587
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggtt 174  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||| |||    
T  37270747 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaagtt 37270648  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  37270647 ttgaagttgtaatgggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 37270587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 27484514 - 27484642
Alignment:
Q  108 ttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaa 207  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27484514 ttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaa 27484613  T
Q  208 aatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||| ||||||    
T  27484614 aatccgttgaatttgtgtagaattgatgt 27484642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 27852776 - 27852605
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||| ||||    || |||||||||||||||||||||||||||||||||||||| |    
T  27852776 cagagaagagaagaatcttgtgaaaagaggagcattcttgtagagtccgatca----atctaaggtaagggtgggactaactttctctaattctaagtgg 27852681  T
Q  111 tataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 185  Q
    ||||||||| |||||||| |||| ||  ||||||||||| ||| |||||||||||||||||| ||| |||||||||    
T  27852680 tataattctgaaaattgaatttaacaagttgtaggttgttgttttgggaatttgggaattagatttagaagttgta 27852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 25142256 - 25142133
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| ||  ||||||||||||||| ||||||||||||||||    
T  25142256 taaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatt 25142157  T
Q  170 aggttttgaagttgtaattggttg 193  Q
    |||||| |||||||||||||||||    
T  25142156 aggtttagaagttgtaattggttg 25142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 36841266 - 36841151
Alignment:
Q  121 aaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatt 220  Q
    |||||||||||| ||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  36841266 aaattgagtttaacatgttgtaggttgtagttatgggaatttagaaattaggttttgaagttgtaattggttgttaatagagtagaaaatatgttgaatt 36841167  T
Q  221 tgtgtagaagtgatgt 236  Q
    ||||||||| ||||||    
T  36841166 tgtgtagaattgatgt 36841151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 195
Target Start/End: Complemental strand, 357933 - 357809
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||  |||| ||  | ||||||||||||| | | |||||||||||||    
T  357933 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatta 357834  T
Q  171 ggttttgaagttgtaattggttgtt 195  Q
    ||||| |||||||||||||||||||    
T  357833 ggtttagaagttgtaattggttgtt 357809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 3539889 - 3539766
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||| ||||| || |||| ||  ||||||||||||||| | |||||||| |||||    
T  3539889 taaggtaagggtgggactaactttctctaattttaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttttggaatttgagaatt 3539790  T
Q  170 aggttttgaagttgtaattggttg 193  Q
    |||||| |||||||||||||||||    
T  3539789 aggtttagaagttgtaattggttg 3539766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 1383545 - 1383667
Alignment:
Q  73 aggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattagg 172  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||  |||| ||  | ||||||||||||| ||| |||||||||||||||    
T  1383545 aggtaagggtgagactaactttctctaattctaagttgtatcattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattagg 1383644  T
Q  173 ttttgaagttgtaattggttgtt 195  Q
    ||| |||||||||||||||||||    
T  1383645 tttagaagttgtaattggttgtt 1383667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 21369405 - 21369316
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaa 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||| | ||||||||||    
T  21369405 cagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggacaagctttctctaa 21369316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 44 - 195
Target Start/End: Complemental strand, 22502050 - 22501897
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgta 142  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||  | ||||||| | |||||  |||| ||| ||||     
T  22502050 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22501951  T
Q  143 ggttgtagttatgggaatttggg-aattaggttttgaagttgtaattggttgtt 195  Q
    |||||||||| |  ||||||||| ||||||| || |||||||| ||||||||||    
T  22501950 ggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 44 - 195
Target Start/End: Complemental strand, 22509984 - 22509831
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgta 142  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||  | ||||||| | |||||  |||| ||| ||||     
T  22509984 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22509885  T
Q  143 ggttgtagttatgggaatttggg-aattaggttttgaagttgtaattggttgtt 195  Q
    |||||||||| |  ||||||||| ||||||| || |||||||| ||||||||||    
T  22509884 ggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22509831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 36841339 - 36841267
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtg 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36841339 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 36841267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 14179669 - 14179758
Alignment:
Q  12 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||| |||| ||||    
T  14179669 agagaagagaataatcttgtgagaagaggagcaatcttgtagagttcgatcatctaatataaggtaagggtgggactaaccttctttaat 14179758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 31521281 - 31521197
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttc 95  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||| | |||||||||    
T  31521281 cagagaagagaagaatcttgtgagaagaggagcaatcttgtacagtccgatcatctaatttagggtaagggtgaggctaactttc 31521197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 20916419 - 20916326
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattct 104  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||  | |||||||||||||| |||||||||| |||||| |||  |||||||    
T  20916419 cagagaagagaggaatcttatgagaagaggagcaatcttgtagagctcgatcatctaatttaaagtaagggtggaactaaccttcaataattct 20916326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 149474 - 149553
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    ||||||||||||||| |||||||||| |||||||||||||| |||| |||||||||||  | ||||||||||||||||||    
T  149474 aatcttgtagagtccgatcatctaatctaaggtaagggtggaactagctttctctaataatgagttgtataattctaaaa 149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 14183414 - 14183496
Alignment:
Q  19 agaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||||||||||||| | ||||||||| || | ||| |||||||||||||||||||||||||||||||| |||| ||||    
T  14183414 agaagaatcttgtgagaagtgaagcaatcttataaaatccgatcatctaatttaaggtaagggtgggactaaccttctttaat 14183496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 171
Target Start/End: Complemental strand, 44072609 - 44072509
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||| ||||||||||| |||||||||||| |||| ||| | |||||||| |||||||  ||||||||||||||| ||||||||||| ||||    
T  44072609 taaggtaagggtgagactaactttcactaattctaagt-gtatgattttgaaaattgaatttagcaagttgtaggttgtagttttgggaatttggaaatt 44072511  T
Q  170 ag 171  Q
    ||    
T  44072510 ag 44072509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 188
Target Start/End: Complemental strand, 22260090 - 22259974
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||| ||| ||||||||||| ||||||||||| || || ||||| |||||||| |||| ||  ||||||||||||||| | ||||||||||||||    
T  22260090 taaggtaagagtgtgactaactttcactaattctaag-tgcatgattctgaaaattgaatttaacaggttgtaggttgtagtt-taggaatttgggaatt 22259993  T
Q  170 aggttttgaagttgtaatt 188  Q
    ||| || ||||||||||||    
T  22259992 aggcttagaagttgtaatt 22259974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 5986229 - 5986125
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||||||| |||||||  |||| ||  ||||||||| ||||| || | ||||| |||||    
T  5986229 taaggtaagggtgggacgaaccttctttaattctaagttgtataattctgaaaattggatttaacaagttgtaggttatagttttgaggatttgagaatt 5986130  T
Q  170 aggtt 174  Q
    |||||    
T  5986129 aggtt 5986125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 25046170 - 25046066
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||| | |||||  |||| ||| ||||||| ||||||| || | ||||  |||||    
T  25046170 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggatgtagttttgaggatttaagaatt 25046071  T
Q  170 aggtt 174  Q
    |||||    
T  25046070 aggtt 25046066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 18390229 - 18390326
Alignment:
Q  86 actaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttg 183  Q
    |||||||||||||||||||||||  ||||||||| ||||| || |||| || | |||| ||||||||| ||||||||||||||||||| || |||||||    
T  18390229 actaactttctctaattctaagtgatataattctgaaaatagaatttaaca-agtgtatgttgtagttttgggaatttgggaattaggattagaagttg 18390326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 24718127 - 24718041
Alignment:
Q  15 gaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||   |||  ||  ||||||||||||||||| |||| ||||    
T  24718127 gaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacatatagtaagggtgggactaacattctttaat 24718041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 23801592 - 23801496
Alignment:
Q  33 agaagaggagcaatcttgtagagtccaa------tcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    ||||||||||||| ||||||||||||||      ||||||||| ||||||||||||||||||| |||||||||||  |  ||||||| |||||||||    
T  23801592 agaagaggagcaagcttgtagagtccaaattcaatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaa 23801496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 19358943 - 19358820
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttggg-aat 168  Q
    ||||||||||||||||||||| ||   ||||||| |||  ||| ||||| |||||||| |||| ||  |||| |||||||||| |||||||||||| |||    
T  19358943 taaggtaagggtgggactaacctttaataattctgagta-tatgattctgaaaattgaatttaacaagttgtgggttgtagttttgggaatttgggaaat 19358845  T
Q  169 taggttttgaagttgtaattggttg 193  Q
    |||| || |||||||||||||||||    
T  19358844 tagggttagaagttgtaattggttg 19358820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 24884453 - 24884399
Alignment:
Q  140 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgt 194  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||    
T  24884453 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 24884399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 21080969 - 21081006
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21080969 taaggtaagggtgggactaactttctctaattctaagt 21081006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 25184241 - 25184204
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  25184241 taaggtaagggtgagactaactttctctaattctaagt 25184204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 172
Target Start/End: Complemental strand, 14694383 - 14694276
Alignment:
Q  66 taatttaaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatggga-atttg 163  Q
    |||| ||||||||||||| |||||||||||| |||||||||||  | ||||| | |||||||  |||| |||  |||||||||||||| ||||| |||||    
T  14694383 taatctaaggtaagggtgagactaactttctataattctaagtaatttaattttgaaaattggatttaacatgatgtaggttgtagtt-tgggagatttg 14694285  T
Q  164 ggaattagg 172  Q
     ||||||||    
T  14694284 agaattagg 14694276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 18388257 - 18388312
Alignment:
Q  138 ttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttg 193  Q
    ||||||||||||||| ||||||||||||||||| | || ||||||| || ||||||    
T  18388257 ttgtaggttgtagttttgggaatttgggaattatggttagaagttgcaaatggttg 18388312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 18357975 - 18358004
Alignment:
Q  79 gggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||    
T  18357975 gggtgggactaactttctctaattctaagt 18358004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 21915672 - 21915639
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||| ||||||||||||||||||||||||    
T  21915672 gtaagggtgtgactaactttctctaattctaagt 21915639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 12626399 - 12626447
Alignment:
Q  44 aatcttgtagagtccaatcat-ctaatttaaggtaagggtgggactaac 91  Q
    ||||||||||||||| ||||| | ||| |||||||||||||||||||||    
T  12626399 aatcttgtagagtccgatcattcaaatgtaaggtaagggtgggactaac 12626447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 21315476 - 21315524
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||||||||| |||||||||||  |  |||||||||||||    
T  21315476 taaggtaagggtgggactagctttctctaataatgggttgtataattct 21315524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 21335266 - 21335314
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||||||||| |||||||||||  |  |||||||||||||    
T  21335266 taaggtaagggtgggactagctttctctaataatgggttgtataattct 21335314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 19676823 - 19676598
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19676823 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 19676724  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19676723 tataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 19676624  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||| ||||||    
T  19676623 ccgttgaatttgtgtagaattgatgt 19676598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 21045992 - 21046214
Alignment:
Q  14 agaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtat 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21045992 agaagagaagaatcttgtgagaagaggtgcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtat 21046091  T
Q  114 aattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccg 213  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21046092 aattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccg 21046191  T
Q  214 ttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||| ||||||    
T  21046192 ttgaatttgtgtagaattgatgt 21046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 20633571 - 20633799
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  20633571 cagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaacttgctctaattctaagttg 20633670  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtag---ttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaa 207  Q
    ||||||||| |||||||||||||||| ||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  20633671 tataattctgaaattgagtttagcatgttgtaggttatagttattatgggaatttgggaattaggttttgaagttgtaattggttgttaatagaataaaa 20633770  T
Q  208 aatccgttgaatttgtgtagaagtgatgt 236  Q
    |||  ||||||||||||||||| ||||||    
T  20633771 aataagttgaatttgtgtagaattgatgt 20633799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 44 - 236
Target Start/End: Original strand, 16058287 - 16058478
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtag 143  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  16058287 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 16058386  T
Q  144 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16058387 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 16058478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 42913101 - 42912936
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||| |||||||    
T  42913101 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttgtgggaatttaggaatta 42913002  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  42913001 ggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 42912936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 21168985 - 21168831
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||||||||| | ||||||||||||||| || |||||||||||||||||||||||||||||| |||| | ||||   | || |||||||||||| |    
T  21168985 taaggtaagggtggaattaactttctctaattttaggttgtataattctaaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgggaataa 21168886  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 226  Q
    ||||||||| | ||  || ||| ||||||||||||||||||| |||||||||||||    
T  21168885 ggttttgaattagt-ttttgtttttaatagagtagaaaatccattgaatttgtgta 21168831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 41225394 - 41225484
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||| |||| ||||    
T  41225394 cagagaagagaagaatcttgtgagaagaggagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaat 41225484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 41226647 - 41226737
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||| |||| ||||    
T  41226647 cagagaagagaagaatcttgtgagaagaggagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaat 41226737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 51324556 - 51324398
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||| ||  |||| ||  | ||||||||||||| |||||| ||||||||||    
T  51324556 taaggtaagggtgagactaactttccctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttgggaaattgggaatta 51324457  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 229  Q
    |||||  ||||||||||||||||||   | |||||||||||  ||||||| ||||||||    
T  51324456 ggtttaaaagttgtaattggttgttttaatagtagaaaatctattgaattggtgtagaa 51324398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 13302954 - 13302849
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||| |||| ||  ||||||||||||||| ||||||||||||||||    
T  13302954 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatt 13302855  T
Q  170 aggttt 175  Q
    ||||||    
T  13302854 aggttt 13302849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 12710979 - 12710871
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| | |||||||| |||||||||||  |  ||||    
T  12710979 cagagaagagaagaatcttatgagaagaggagcaatcttgtagagtcccatcatctaatctaaggtaaagatgggactagctttctctaatattgggttg 12710880  T
Q  111 tataattct 119  Q
    |||||||||    
T  12710879 tataattct 12710871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 71 - 195
Target Start/End: Original strand, 24723351 - 24723475
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||| |||| ||  | |||| |||||||| ||| |||||| ||||||    
T  24723351 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactgaatttaacaggtggtagattgtagttttggaaatttgagaatta 24723450  T
Q  171 ggttttgaagttgtaattggttgtt 195  Q
     |||| |||||||||||||||||||    
T  24723451 tgtttagaagttgtaattggttgtt 24723475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 28476674 - 28476782
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||  ||||||||| |||||||||||||||||||  ||||||||||  | |||||    
T  28476674 cagagaagggaagaatcttgtgagaagaggagcaatcttgcagagtccggtcatctaatctaaggtaagggtgggactagatttctctaataatgagttg 28476773  T
Q  111 tataattct 119  Q
    |||||||||    
T  28476774 tataattct 28476782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 20588748 - 20588638
Alignment:
Q  13 gagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgta 112  Q
    ||||||||||||||  |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || |||||||||||  |  ||||||    
T  20588748 gagaagagaagaatactgtgagaagaggagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaataatgggttgta 20588649  T
Q  113 taattctaaaa 123  Q
    | |||||||||    
T  20588648 tgattctaaaa 20588638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 20593286 - 20593176
Alignment:
Q  13 gagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgta 112  Q
    ||||||||||||||  |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || |||||||||||  |  ||||||    
T  20593286 gagaagagaagaatactgtgagaagaggagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaataatgggttgta 20593187  T
Q  113 taattctaaaa 123  Q
    | |||||||||    
T  20593186 tgattctaaaa 20593176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 22350820 - 22350646
Alignment:
Q  14 agaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtat 113  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||| ||||    || ||||||||||||||||||||| |||  ||||||| |||  |||    
T  22350820 agaaaagaagaatcttatgaga-gaggagcaatcttgtagagtccgatca----atctaaggtaagggtgggactaaccttcaataattctgagta-tat 22350727  T
Q  114 aattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttg 193  Q
     ||||| |||||||| |||| ||  ||||||||||||||| ||||||||||||||||||| || ||||||| || ||||||    
T  22350726 gattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 22350646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 195
Target Start/End: Original strand, 7051922 - 7052046
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||  |||| ||  | |||| || ||||| | | |||||||||||||    
T  7051922 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattttagttttagaaatttgggaatta 7052021  T
Q  171 ggttttgaagttgtaattggttgtt 195  Q
    ||||| ||| |||||||||||||||    
T  7052022 ggtttagaaattgtaattggttgtt 7052046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 7320594 - 7320716
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||| | | |||||||||||| |||| ||||| |||||||| |||| ||  |||||| |||||||| ||||||||||||||||    
T  7320594 taaggtaagggtgggactaacctacactaattctaagt-gtattattctgaaaattgaatttaacaggttgtagattgtagttttgggaatttgggaatt 7320692  T
Q  170 aggttttgaagttgtaattggttg 193  Q
    | |||| || ||||||||||||||    
T  7320693 atgtttagatgttgtaattggttg 7320716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 8306697 - 8306606
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    ||||||||||||||||| |||||| || |||||||||| ||||||||| ||||||||| |||||||||||  |  |||||||||||||||||    
T  8306697 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagagtgggactagctttctctaataatgggttgtataattctaaaa 8306606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 220
Target Start/End: Original strand, 4595853 - 4595995
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||| ||||| || |||| ||  ||||||||||||||        ||||||||||    
T  4595853 taaggtaagggtgagactaactttctctaattctaagaggtataattctgaaaatcgaatttaacaagttgtaggttgtagt--------tttgggaatt 4595944  T
Q  170 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatt 220  Q
    || ||| ||||||||||||||||| |   |||||||| |||||| ||||||    
T  4595945 agatttagaagttgtaattggttgatttaagagtagataatccgatgaatt 4595995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 42697836 - 42697732
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||| | |||||  |||| ||| ||||||||||||||| || | ||||| |||||    
T  42697836 taaggtaagggtgagactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggttgtagttttgaggatttgagaatt 42697737  T
Q  170 aggtt 174  Q
    |||||    
T  42697736 aggtt 42697732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 51336531 - 51336483
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  51336531 taaggtaagggtgggactaactttctctaattctaagttgtatgattct 51336483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 44822090 - 44822145
Alignment:
Q  140 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 195  Q
    ||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||    
T  44822090 gtaggttgtagttctggaaatttgggaattaggtttagaagttgtaattggttgtt 44822145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 21239049 - 21239130
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagtt 152  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||| ||| ||  |||| ||  | |||||||||||||    
T  21239049 taaggtatgggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtt 21239130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 45499446 - 45499374
Alignment:
Q  68 atttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgt 141  Q
    |||||| |||||||||| | ||||| ||||||||| || ||||||||||||| |||||||||||||||||||||    
T  45499446 atttaacgtaagggtgg-attaactctctctaattttaggttgtataattctgaaattgagtttagcatattgt 45499374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 12327743 - 12327791
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  12327743 taaggtaagggtgagactaactttctctaattctaagttgtatgattct 12327791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 29763632 - 29763669
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29763632 taaggtaagggtgggactaactttctctaattctaagt 29763669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 46197745 - 46197782
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46197745 taaggtaagggtgggactaactttctctaattctaagt 46197782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 45755572 - 45755468
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||| ||||||| |||| ||||| |||||| ||| ||||| |||| ||  |||| ||  ||||||||||||||| || ||||||| |||||    
T  45755572 taaggtaagggtgagactaaccttctttaattataagttatatgattctgaaaagtggatttaacaagttgtaggttgtagttttgagaatttgagaatt 45755473  T
Q  170 aggtt 174  Q
    |||||    
T  45755472 aggtt 45755468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 17901754 - 17901842
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||||||||||| ||| ||||||||  ||||||||| | ||||||||||||| ||||| |||||||||||  |  |||||||||||||    
T  17901754 gagaagaggagcaagctt-tagagtccggaatcatctattctaaggtaagggtgagactagctttctctaataatgggttgtataattct 17901842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 34392853 - 34392768
Alignment:
Q  40 gagcaatcttgtagagtccaa--tcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    |||||||||||||||||||||  ||| | ||| ||||||||||||| ||||| |||||||||||  |  ||||||| |||||||||    
T  34392853 gagcaatcttgtagagtccaaattcaaccaatctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaa 34392768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 50001528 - 50001491
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    |||||||||||||||||||||||||| |||||||||||    
T  50001528 taaggtaagggtgggactaactttctttaattctaagt 50001491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 635004 - 635056
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    ||||||||||||| ||||| |||||||||||  || |||||||||||||||||    
T  635004 taaggtaagggtgagactagctttctctaataataggttgtataattctaaaa 635056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 45499634 - 45499564
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||| ||| ||||||||  |||||| |||| ||||||||||||| ||||| |||||||||||    
T  45499634 gagaagaggagcaagctt-tagagtccggaatcatataatctaaggtaagggtgagactagctttctctaat 45499564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 101
Target Start/End: Original strand, 22145665 - 22145696
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||||||||||||||||||||||||||    
T  22145665 ttaaggtaagggtgggactaactttctctaat 22145696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 6834268 - 6834180
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||||||||||| ||| ||||||||  ||||||||| | ||||| |||||||  |||| |||||||||||  | ||||||||||||||    
T  6834268 gagaagaggagcaagctt-tagagtccggaatcatctattctaaggcaagggtgatactagctttctctaataatgagttgtataattct 6834180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 8276079 - 8276112
Alignment:
Q  160 tttgggaattaggttttgaagttgtaattggttg 193  Q
    |||||||||||||||| |||||||||||||||||    
T  8276079 tttgggaattaggtttagaagttgtaattggttg 8276112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 38056762 - 38056795
Alignment:
Q  160 tttgggaattaggttttgaagttgtaattggttg 193  Q
    |||||||||||||||| |||||||||||||||||    
T  38056762 tttgggaattaggtttagaagttgtaattggttg 38056795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 7703188 - 7703144
Alignment:
Q  57 ccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||| | ||| ||||||||||||||||||| |||||||||||    
T  7703188 ccaatcaaccaatctaaggtaagggtgggactagctttctctaat 7703144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 24727419 - 24727383
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaag 107  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  24727419 taaggtaagggtgggactaaccttctttaattctaag 24727383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 35895192 - 35895121
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||| ||||||||||    ||||||||||| ||||||| |||| |||||| |||| ||||||    
T  35895192 gagaagaggagcaagcttgtagagtttgaaatcatctaatctaaggtatgggtaggactagctttatctaat 35895121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 11 - 234
Target Start/End: Original strand, 22306523 - 22306746
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22306523 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 22306622  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22306623 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaat 22306722  T
Q  211 ccgttgaatttgtgtagaagtgat 234  Q
    |||||||||||||| | |||||||    
T  22306723 ccgttgaatttgtgcataagtgat 22306746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 17045078 - 17044853
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17045078 cagagaagagaagaatcttgtgagaagatgagtaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 17044979  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17044978 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 17044879  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
      ||||||||||||||||| ||||||    
T  17044878 ttgttgaatttgtgtagaattgatgt 17044853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 17047238 - 17047013
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17047238 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 17047139  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  17047138 tataattctgaaattgagtttagcatgttgtaggttgtagttatttgaatttgggaattaagttttgaagttgtaattggttgttaatagagtaaaaaat 17047039  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||| ||||||    
T  17047038 ccgttgaatttgtgtagaattgatgt 17047013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 17694179 - 17693954
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  17694179 cagagaagagaagaatcttgcgagaagaggagcaatcttgtagagtccgatcatctaatttaatgtaagggtgagactaactttctctaattctaagttg 17694080  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||| ||||||||||||||||| | ||||||||||||||||||    
T  17694079 tataattctaaaattgagtttagcatgttgtaggttgtagttatggaaatttgtgaattagattttgaagttgtaattgatcgttaatagagtagaaaat 17693980  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||| ||||||    
T  17693979 ccgttgaatttgtgtagaattgatgt 17693954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 35354714 - 35354489
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  35354714 cagagaagagaagaatcttgtgataagaggagcaatcttgtagagtccaatcatctaatttaagctaagtgtgggactaactttctctaattttaagttg 35354615  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||  |||||||||||||    
T  35354614 tataattctgaaattgagtttagcatgttgttggttgtagttatgggaatttggaaattaggttttgaagttgtaattgattgttggtagagtagaaaat 35354515  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||| ||||||    
T  35354514 ccgttgaatttgtgtagaattgatgt 35354489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 11259537 - 11259318
Alignment:
Q  17 agagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataat 116  Q
    |||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11259537 agagaagaatcttgcgagaagaggagcaatcttgtagagtccgattatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataat 11259438  T
Q  117 tctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttg 216  Q
    ||| ||||||| |||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  11259437 tctgaaattgaatttagcatgttgtagattgtagttatgagaatttgggaattaggttttgaagttgtaattgattgttaataaagtagaaaatccgttg 11259338  T
Q  217 aatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||||    
T  11259337 aatttgtgtagaagtgatgt 11259318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 17539217 - 17538993
Alignment:
Q  12 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgt 111  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  17539217 agagaagagaagaatcttgtgagaagaggagtaatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttatctaattctaagttgt 17539118  T
Q  112 ataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatc 211  Q
    |||||||| ||||||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  17539117 ataattctgaaattgattttatcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagatgtaattggttgttaatagagtagaaaatc 17539018  T
Q  212 cgttgaatttgtgtagaagtgatgt 236  Q
     ||||||||||||||||| ||||||    
T  17539017 tgttgaatttgtgtagaattgatgt 17538993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 11 - 234
Target Start/End: Original strand, 41172311 - 41172534
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| || |||||||    
T  41172311 cagagaagagaagaatcttgtgacaagatgagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctacttataagttg 41172410  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||| ||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41172411 tataactctgaaattgagtttagcatgttgtaggttgtagttatgggaattagggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 41172510  T
Q  211 ccgttgaatttgtgtagaagtgat 234  Q
      ||||||||||||||||| ||||    
T  41172511 ttgttgaatttgtgtagaattgat 41172534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 35 - 245
Target Start/End: Complemental strand, 49900818 - 49900608
Alignment:
Q  35 aagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagc 134  Q
    |||||||| ||||| |||||| || |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  49900818 aagaggagtaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaattgagtttagc 49900719  T
Q  135 atattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgat 234  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  49900718 atgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgat 49900619  T
Q  235 gtccatctcat 245  Q
    || ||| ||||    
T  49900618 gttcatatcat 49900608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 40812941 - 40812720
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||||| |||||||||||||||||| || |||| ||||||||| | ||||    || ||||||||||||||||||||||||||||||||||||||||    
T  40812941 cagagaagaaaagaatcttgtgagaagatgaacaattttgtagagttcgatca----atctaaggtaagggtgggactaactttctctaattctaagttg 40812846  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
     |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40812845 cataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattgattgttaatagagtagaaaat 40812746  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||| ||||||    
T  40812745 ccgttgaatttgtgtagaattgatgt 40812720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 44 - 236
Target Start/End: Original strand, 17518846 - 17519038
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtag 143  Q
    |||||| |||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||    
T  17518846 aatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtag 17518945  T
Q  144 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17518946 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17519038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 44 - 236
Target Start/End: Original strand, 17533708 - 17533900
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtag 143  Q
    |||||| |||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||    
T  17533708 aatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtag 17533807  T
Q  144 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17533808 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17533900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 40808048 - 40807883
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40808048 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 40807949  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40807948 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 40807883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 15931448 - 15931672
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||| |    
T  15931448 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcatttaatttaaggtaaaggtgagactaactttctctaattctaagt-g 15931546  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||| ||||||||||| || ||||||||||||||| |||||| |||||||||||| ||||||||||||  || |||||||||||||||||    
T  15931547 tataattctgaaatagagtttagcatgttttaggttgtagttatgagaattttggaattaggtttcgaagttgtaattaattattaatagagtagaaaat 15931646  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
     |||||||||||||||||| ||||||    
T  15931647 tcgttgaatttgtgtagaattgatgt 15931672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 14508959 - 14508749
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  14508959 cagagaagagaataatcttgtgagaagaagagtaatcttgtagagtccgatcatctaatttatggtaagggtgagactaactttctctaattctaagttg 14508860  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggtttt-gaagttgtaattggttgttaatagagtagaaaa 209  Q
    ||||||||| |||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||  | |||||||| ||    
T  14508859 tataattctgaaattgaggttagcatgttgtaggttgtagttatgggaattttggaattaggttttggaagttgtaattggttgtagaaagagtagataa 14508760  T
Q  210 tccgttgaatt 220  Q
    || | ||||||    
T  14508759 tctgatgaatt 14508749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 44274470 - 44274305
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44274470 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 44274371  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
      |||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||    
T  44274370 tattttgaagttgtaattggttgttaatagagtagaaaattcattgaatttgtgtagaattgatgt 44274305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 86 - 236
Target Start/End: Original strand, 50348041 - 50348191
Alignment:
Q  86 actaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 185  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50348041 actaactttctctaattctaagttgtataattttaaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 50348140  T
Q  186 attggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  50348141 attggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 50348191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 10311575 - 10311415
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggtt 174  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||| |||| |||||||||||||||||| ||||||| ||||||||||    
T  10311575 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 10311476  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10311475 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 10311415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 10563760 - 10563596
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| | |||||||||||||||| |||||| |||||||||||| |||||||||||||    
T  10563760 taaggtaatggtgggactaactttctctaattttaagttgtataattatgaaattgagtttagcatgttgtagtttgtagttatggaaatttgggaatta 10563661  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||    
T  10563660 ggttttgaagttgtaattggttgttaatagagtagaaaagccgttgaatttg-gtagaattgatgt 10563596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 17541546 - 17541423
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17541546 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 17541447  T
Q  111 tataattctaaaattgagtttagc 134  Q
    ||||||||| ||||||||||||||    
T  17541446 tataattctgaaattgagtttagc 17541423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 11563788 - 11563654
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatggga 158  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| |||||  | |||| ||  ||||||||||||||| |||||    
T  11563788 atcatctaatctaaggtaagggtgggactaaccttctctaattctaagtggtataattctgaaaatcaaatttaacaagttgtaggttgtagttttggga 11563689  T
Q  159 atttgggaattaggttttgaagttgtaattggttg 193  Q
    |||||||||||||||||  ||||||||||||||||    
T  11563688 atttgggaattaggtttaaaagttgtaattggttg 11563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 71 - 229
Target Start/End: Original strand, 19568208 - 19568366
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |   |||| ||  ||||||||||||||| |||||||||||||||||    
T  19568208 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactagatttaacaggttgtaggttgtagttttgggaatttgggaatta 19568307  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 229  Q
    || || ||||||||||||||| |||   | |||||| ||||||||||||  ||||||||    
T  19568308 gggttagaagttgtaattggtagttgtaatagtagagaatccgttgaatcggtgtagaa 19568366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 35064566 - 35064658
Alignment:
Q  96 tctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaatt 188  Q
    |||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35064566 tctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggttttgaagttgtaatt 35064658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 33565139 - 33565018
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||| |||| ||  |||||||||| |||| ||||||||||| ||||    
T  33565139 taaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 33565040  T
Q  170 aggttttgaagttgtaattggt 191  Q
    |||||| |||||||||||||||    
T  33565039 aggtttagaagttgtaattggt 33565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 45530544 - 45530725
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| | |||||||||| ||   |||||||||| |     
T  45530544 cagagaaga-aagaatcttgtgagaaaaggagcaatcttgtagagtccgatcatctaatttaaggtaa-gatgggactaacatttaataattctaag-ta 45530640  T
Q  111 tataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttg-ggaattaggttttgaagttgtaattggttg 193  Q
    ||| ||||| |||||||| |||| ||  |||| |||||||||| |||||||||| | ||||||| || |||||||||||||||||    
T  45530641 tatgattctgaaaattgaatttaacaggttgtgggttgtagttttgggaatttgcgaaattagggttagaagttgtaattggttg 45530725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 42323971 - 42324094
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||| || | ||||| |||||||||||||||| |||||||| |||  ||| ||||||||||||||| ||||||||||| ||||    
T  42323971 taaggtaagggtgggactaacattatttaattttaagttgtataattctgaaaattgaatttgacatgttgtaggttgtagttttgggaatttggaaatt 42324070  T
Q  170 aggttttgaagttgtaattggttg 193  Q
    ||| || |||||||||||||||||    
T  42324071 agggttagaagttgtaattggttg 42324094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 71 - 217
Target Start/End: Original strand, 9510916 - 9511062
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||||| ||| ||  |||| ||  | |||| |||||||| |||||||||| ||||||    
T  9510916 taaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaatta 9511015  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 217  Q
    ||||| |||||||||||||||||||   | ||||||||||| |||||    
T  9511016 ggtttagaagttgtaattggttgttttaatagtagaaaatctgttga 9511062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 71 - 217
Target Start/End: Original strand, 9518891 - 9519037
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||||| ||| ||  |||| ||  | |||| |||||||| |||||||||| ||||||    
T  9518891 taaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaatta 9518990  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 217  Q
    ||||| |||||||||||||||||||   | ||||||||||| |||||    
T  9518991 ggtttagaagttgtaattggttgttttaatagtagaaaatctgttga 9519037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 71 - 191
Target Start/End: Original strand, 35960928 - 35961049
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||||||||||||||| |||||||||||||||||| || |||||||||| |||||||| |||| ||  |||||||||| |||| ||| ||||||| ||||    
T  35960928 taaggtaagggtgggattaactttctctaattctatgtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttggaaatttggaaatt 35961027  T
Q  170 aggttttgaagttgtaattggt 191  Q
    |||||| |||||||||||||||    
T  35961028 aggtttagaagttgtaattggt 35961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 17325561 - 17325628
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaa 78  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17325561 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccaatcatctaatttaaggtaa 17325628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 13185947 - 13185834
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||||||||||||||||||||||||||||||| |||||  ||||||||| ||||| || |||| ||  ||||||||||||||| ||| ||||||||||||    
T  13185947 taaggtaagggtgggactaactttctctaattttaagtgatataattctaaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatt 13185848  T
Q  170 aggttttgaagttg 183  Q
    |||||| |||||||    
T  13185847 aggtttagaagttg 13185834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 16050979 - 16050875
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||| ||  ||||| ||||||||| || | ||||| ||||||    
T  16050979 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaacaagttgtatgttgtagttttgaggatttgagaatta 16050880  T
Q  171 ggttt 175  Q
    |||||    
T  16050879 ggttt 16050875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 50350759 - 50350846
Alignment:
Q  14 agaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||||||||||||||||| || | ||||||||||| |||||||||| ||||||||||||||||||||| |||| ||||    
T  50350759 agaagagaagaatcttgtgagaagaggaacagtgttgtagagtccgatcatctaatctaaggtaagggtgggactaaccttctttaat 50350846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 14152339 - 14152447
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| | |||   |||  ||||||||||||||||||| |||||||||||  | |||||    
T  14152339 cagagaagagaagaatcttgtgagaagaggagcaatcttgtatagttcgatccattaacctaaggtaagggtgggactagctttctctaataatgagttg 14152438  T
Q  111 tataattct 119  Q
    ||| |||||    
T  14152439 tatcattct 14152447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 35064681 - 35064745
Alignment:
Q  172 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  35064681 gttttgaagttgtaattggttgttaatatagtagaaaatccgttgaatttgtgtagaattgatgt 35064745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 49968858 - 49968981
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaat 168  Q
    |||||||||| ||||||||||| ||| |||||||||||| |||| ||||| |||||||| |||| ||  |||||| |||||||| || ||||||||||||    
T  49968858 ttaaggtaagagtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtagcttgtagttttgagaatttgggaat 49968956  T
Q  169 taggttttgaagttgtaattggttg 193  Q
    |||||||  ||||||||||||||||    
T  49968957 taggtttataagttgtaattggttg 49968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 15566823 - 15566748
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||||| |||||| ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15566823 aatcttgttgagtccgatcatgtaatctaaagtaagggtgggactaactttctctaattctaagttgtataattct 15566748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 5200277 - 5200335
Alignment:
Q  178 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5200277 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5200335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 74 - 172
Target Start/End: Original strand, 11885560 - 11885658
Alignment:
Q  74 ggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattagg 172  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| |||||||  |||| ||  ||||||||||||||| |||||||||| ||||||||    
T  11885560 ggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgagaattagg 11885658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 14641509 - 14641600
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    ||||||||||||||||| |||||| || |||||||||| |||||||||||||||| || |||||||||||  |  |||||||||||||||||    
T  14641509 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggattagctttctctaataatgggttgtataattctaaaa 14641600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 24177736 - 24177840
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||| ||| ||  ||||  |  | ||||||||||||| ||| |||||||||||||    
T  24177736 taaggtaagggtgggacaaactttctctaattataagttgtataattctgaaactggatttaataggtggtaggttgtagttttggaaatttgggaatta 24177835  T
Q  171 ggttt 175  Q
     ||||    
T  24177836 tgttt 24177840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 50347596 - 50347656
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaact 92  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  50347596 gagaaaaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaact 50347656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 193
Target Start/End: Complemental strand, 37039085 - 37038978
Alignment:
Q  88 taactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttggg-aattaggttttgaagttgta 185  Q
    |||| |||| ||||| |||||||||||||||| |||||||  |||| ||| ||||||||||||||| |||||||||||| ||||||| ||  ||||||||    
T  37039085 taacattctttaattataagttgtataattctgaaaattggatttaacatgttgtaggttgtagttttgggaatttgggaaattagggttaaaagttgta 37038986  T
Q  186 attggttg 193  Q
    ||||||||    
T  37038985 attggttg 37038978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 15446868 - 15446916
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15446868 taaggtaagggtgggactaactttctctaattctaagttgtattattct 15446916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 112
Target Start/End: Original strand, 5200243 - 5200284
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgta 112  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5200243 taaggtaagggtgggactaactttctctaattctaagttgta 5200284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 12509350 - 12509431
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagtt 152  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||||||| ||||||  |||| ||| | ||||| |||||||    
T  12509350 taaggtaagggtgggacaaaccttctttaattctaagttgtataattctgaaattggatttaacatgtggtaggatgtagtt 12509431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 6159484 - 6159405
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||  |||||||||||  |  ||||||| |||||||||    
T  6159484 aatcttgtagagtccgatcatctaatctaaggtaagggtgagactcgctttctctaataatgggttgtatgattctaaaa 6159405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 12917265 - 12917358
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaa--tcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    |||||||||||||| |||||||||||| |  ||| | ||| |||| ||||||||||||||||||||||||||  |  ||||||| |||||||||    
T  12917265 gagaagaggagcaagcttgtagagtccgaattcaaccaatctaagataagggtgggactaactttctctaataatgggttgtatgattctaaaa 12917358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 36528919 - 36528858
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagttta 132  Q
    |||||||||||||||| |||||||||||||||||||||  ||||||||| | |||| |||||    
T  36528919 taaggtaagggtgggattaactttctctaattctaagtaatataattctgagattgggttta 36528858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 53646032 - 53646089
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||||||||  |||||||||| ||||||||||||||||||||| |||| ||||    
T  53646032 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaaccttctttaat 53646089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 3527117 - 3527187
Alignment:
Q  33 agaagaggagcaatcttgtagagtccaa--tcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||||||| |||||||||||| |  ||| || || ||||||||||||||||||| |||||||||||    
T  3527117 agaagaggagcaaacttgtagagtccgaattcaacttatctaaggtaagggtgggactagctttctctaat 3527187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 108
Target Start/End: Complemental strand, 22652826 - 22652788
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagt 108  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  22652826 ttaaggtaagagtgggactaactttctctaattctaagt 22652788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 29907731 - 29907643
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||||||||||| ||  ||||||||  ||||||||||| ||||||||||||||||||| |||||| ||||  |  |||||||||||||    
T  29907731 gagaagaggagcaagctc-tagagtccggaatcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattct 29907643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 29948897 - 29948809
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||||||||||| ||  ||||||||  ||||||||||| ||||||||||||||||||| |||||| ||||  |  |||||||||||||    
T  29948897 gagaagaggagcaagctc-tagagtccggaatcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattct 29948809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 29998051 - 29997963
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||||||||||| ||  ||||||||  ||||||||||| ||||||||||||||||||| |||||| ||||  |  |||||||||||||    
T  29998051 gagaagaggagcaagctc-tagagtccggaatcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattct 29997963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 16979964 - 16979927
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    |||||||||||||||||||||||||| |||||||||||    
T  16979964 taaggtaagggtgggactaactttctttaattctaagt 16979927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 14250085 - 14250185
Alignment:
Q  74 ggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggt 173  Q
    |||||| ||||||||||| |||| |||||||||||||| ||||| | ||||||  |||| ||| ||||| | ||||||| |||  ||||  |||||||||    
T  14250085 ggtaagagtgggactaaccttctttaattctaagttgtgtaattttcaaattggatttaacatgttgtaagatgtagttttggagatttaagaattaggt 14250184  T
Q  174 t 174  Q
    |    
T  14250185 t 14250185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 17208576 - 17208528
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||||||||| |||||||||||  | ||||||||||||||    
T  17208576 taaggtaagggtgggactagctttctctaataatgagttgtataattct 17208528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 6820243 - 6820192
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttc 95  Q
    ||||||||||||||||||||| |||  |||||||||||||  ||||||||||    
T  6820243 aatcttgtagagtccaatcatttaacctaaggtaagggtgatactaactttc 6820192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 22758835 - 22758935
Alignment:
Q  72 aaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||||||| ||||||| |||  |||||||||||  | ||||||| |||||||  |||| ||| ||||||||| ||||| || | ||||||||||||    
T  22758835 aaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgaggatttgggaatta 22758933  T
Q  171 gg 172  Q
    ||    
T  22758934 gg 22758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 54875473 - 54875526
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    |||||||||||||||||||| |||||||||||  |  ||||||| |||||||||    
T  54875473 ttaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaa 54875526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 6156762 - 6156710
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    ||||||||||||||||||| |||||||||||  |  ||||||| |||||||||    
T  6156762 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaa 6156710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 14520498 - 14520446
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    ||||||||||||||||||| |||||| ||||  |  |||||||||||||||||    
T  14520498 taaggtaagggtgggactagctttctttaataatgggttgtataattctaaaa 14520446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 22146832 - 22146880
Alignment:
Q  146 tgtagttatgggaatttgggaa-ttaggttttgaagttgtaattggttg 193  Q
    ||||||| |||||||||||||| ||||| || |||||||||||||||||    
T  22146832 tgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 22146880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 40957238 - 40957186
Alignment:
Q  115 attctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaa 167  Q
    ||||||||||||| |||| ||| |||| |||||||||| ||| ||||||||||    
T  40957238 attctaaaattgaatttaacatgttgttggttgtagttttggaaatttgggaa 40957186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 198; Significance: 1e-108; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 32106 - 31881
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32106 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttg 32007  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32006 tataattctgaaattgagtttagcatgttataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaat 31907  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
     |||||||||||||||||||||||||    
T  31906 tcgttgaatttgtgtagaagtgatgt 31881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 37413 - 37188
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37413 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttg 37314  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37313 tataattctgaaattgagtttagcatgttataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaat 37214  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
     |||||||||||||||||||||||||    
T  37213 tcgttgaatttgtgtagaagtgatgt 37188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 77799 - 77574
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  77799 cagagaacagaagaatcttgtgagaagaggagtaatcttgtagagtctgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttg 77700  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  77699 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaataggttgttaatagagtagaaaat 77600  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||| || ||||||    
T  77599 ccgttgaatttgtgtataattgatgt 77574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 58858 - 58633
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  58858 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttg 58759  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    || |||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  58758 tacaattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaat 58659  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||| ||||| ||||||    
T  58658 ccgttgaatttgtatagaattgatgt 58633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 17 - 232
Target Start/End: Complemental strand, 19140870 - 19140656
Alignment:
Q  17 agagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataat 116  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19140870 agagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta-ctttctctaattctaagttgtataat 19140772  T
Q  117 tctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttg 216  Q
    ||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19140771 tctgaaattgagtttagcaagttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttg 19140672  T
Q  217 aatttgtgtagaagtg 232  Q
    ||||||||||||||||    
T  19140671 aatttgtgtagaagtg 19140656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 236
Target Start/End: Original strand, 42817849 - 42818072
Alignment:
Q  13 gagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgta 112  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42817849 gagaagagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacttactttctctaattctaagttgta 42817948  T
Q  113 taattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatcc 212  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  42817949 taattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattagattttgaagttgtaattggttgttaataaagtagaaaatcc 42818048  T
Q  213 gttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||| ||||||    
T  42818049 gttgaatttgtgtagaattgatgt 42818072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 39935947 - 39936175
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||||||||||||| |||||||||| || || ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39935947 cagagaagagaagaatcatgtgagaagaagaacagtcttgtagagtccgatcatctaatttaaggtaagggtgggattaactttctctaattctaagttg 39936046  T
Q  111 tataattctaaaattgagtttagca---tattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaa 207  Q
    ||||||| | |||||||||||||||   | |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  39936047 tataattatgaaattgagtttagcatgttgttgtaggttgtagttatgggaatttgcgaattaggttttgaagttgtaattagttgttaatagagtagaa 39936146  T
Q  208 aatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||| || ||||||    
T  39936147 aatccgttgaatttgtgtacaattgatgt 39936175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 71 - 245
Target Start/End: Original strand, 20083638 - 20083812
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  20083638 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaatta 20083737  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgtccatctcat 245  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| ||||    
T  20083738 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgttcatatcat 20083812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 60 - 236
Target Start/End: Complemental strand, 5761596 - 5761421
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaa 159  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||| ||||||||||||||||||||||    
T  5761596 atcatctaacctaaggtaagggtgggactaactttctctaattctaagt-gtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaa 5761498  T
Q  160 tttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  5761497 tttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5761421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 81 - 236
Target Start/End: Original strand, 5082222 - 5082377
Alignment:
Q  81 gtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaag 180  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5082222 gtgggactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaag 5082321  T
Q  181 ttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5082322 ttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5082377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 75 - 236
Target Start/End: Original strand, 6573060 - 6573221
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggtt 174  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  6573060 gtaagggtgagactaactttctctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatgaggtt 6573159  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  6573160 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 6573221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 6101753 - 6101918
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||| |    
T  6101753 taaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaattgtgtttagcatgttgtaggttgtagttatgggaatttgggaatca 6101852  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| | ||||||    
T  6101853 ggttttgaagttataattggttgttaatagagtagaaaatctattgaatttgtgtagtattgatgt 6101918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 37292753 - 37292593
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggtt 174  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||    
T  37292753 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 37292654  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  37292653 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 37292593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 6202824 - 6202664
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggtt 174  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| ||| |||| |||||||||||||||||| ||||||| ||||||||||    
T  6202824 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 6202725  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6202724 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 6202664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 18761559 - 18761452
Alignment:
Q  12 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  18761559 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgcgactaactttctctaattctaagtggt 18761460  T
Q  112 ataattct 119  Q
    ||||||||    
T  18761459 ataattct 18761452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 124 - 245
Target Start/End: Original strand, 20178581 - 20178704
Alignment:
Q  124 ttgagtttagca-tattgtaggttgtagttatgggaatttgggaattaggttttgaagttgt-aattggttgttaatagagtagaaaatccgttgaattt 221  Q
    |||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  20178581 ttgagtttagcaatgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaaattggttgttaatagagtagaaaattcgttgaattt 20178680  T
Q  222 gtgtagaagtgatgtccatctcat 245  Q
    |||||||| |||||| ||| ||||    
T  20178681 gtgtagaattgatgttcatatcat 20178704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 71 - 225
Target Start/End: Original strand, 20397510 - 20397656
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||    |||||     || || |||||||||||    
T  20397510 taaggtaagggtgggattaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt----gttgt-----tgtgattttgggaatta 20397600  T
Q  171 ggttttgaagttgtaatt-ggttgttaatagagtagaaaatccgttgaatttgtgt 225  Q
    |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  20397601 ggttttaaagttgtaattaggttgttaatagagtagaaaatccattgaatttgtgt 20397656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 23943766 - 23943866
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||  || ||||||||||||||||||||    
T  23943766 cagagaagagaagaattttgtgagaagaggagcaatcttgtagagtccggtcatctaatttaaggtaagggtgggtatagctttctctaattctaagttg 23943865  T
Q  111 t 111  Q
    |    
T  23943866 t 23943866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 21579146 - 21579236
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||| ||||    
T  21579146 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaaccttctttaat 21579236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 36306109 - 36306019
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||| |||||||||||    
T  36306109 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaagggtgagactagctttctctaat 36306019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 22258249 - 22258358
Alignment:
Q  14 agaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtat 113  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||||  | ||||||||    
T  22258249 agaagagaagaatcttgtgagaagaagagcaatcttgtagtgtccgatcatctaatttaaggtaagggtgagactagctttctctaataatgagttgtat 22258348  T
Q  114 aattctaaaa 123  Q
    ||||| ||||    
T  22258349 aattccaaaa 22258358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 71 - 229
Target Start/End: Original strand, 22532132 - 22532290
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||  |||| ||  | ||||||||||||| ||| || ||||||||||    
T  22532132 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaatta 22532231  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 229  Q
    |||||  |||||||||||| |||||   | ||||||||||  |||||||| ||||||||    
T  22532232 ggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaa 22532290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 71 - 229
Target Start/End: Original strand, 22536817 - 22536975
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||  |||| ||  | ||||||||||||| ||| || ||||||||||    
T  22536817 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaatta 22536916  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 229  Q
    |||||  |||||||||||| |||||   | ||||||||||  |||||||| ||||||||    
T  22536917 ggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaa 22536975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 31722493 - 31722661
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||| | ||||| || |||| ||  ||||||||||||||| ||||||||||| ||||    
T  31722493 taagataagggtgggactaactttctctaattctaagtggtataattttgaaaatcgaatttaacaagttgtaggttgtagttttgggaatttggaaatt 31722592  T
Q  170 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgtcca 239  Q
     ||||| ||||||||||||||||| |   ||||||| ||||| ||||||||  ||||||| | |||||||    
T  31722593 tggtttagaagttgtaattggttgatttaagagtag-aaatctgttgaattgatgtagaattaatgtcca 31722661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 18834533 - 18834444
Alignment:
Q  12 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||| |||||||||||||||||||||| |||||||||||| | || |||||||||||||||||||||||||||||| |||||||||||    
T  18834533 agagaaaagaagaatcttgtgagaagaggggcaatcttgtagtgcccgatcatctaatttaaggtaagggtgggactagctttctctaat 18834444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 60 - 193
Target Start/End: Original strand, 20022029 - 20022155
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatggga 158  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || |||| ||  ||||||||||||||           
T  20022029 atcatctaatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagt------- 20022121  T
Q  159 atttgggaattaggttttgaagttgtaattggttg 193  Q
     |||||||||||||||| |||||||||||||||||    
T  20022122 -tttgggaattaggtttagaagttgtaattggttg 20022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 45469219 - 45469342
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||| ||||| || |||| ||  ||||||||| ||||| ||  ||||||||||||    
T  45469219 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttatagttttgtaaatttgggaatt 45469318  T
Q  170 aggttttgaagttgtaattggttg 193  Q
    | |||| |||||||||||||||||    
T  45469319 atgtttagaagttgtaattggttg 45469342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 22317911 - 22318033
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||| ||| |||||||||||| |||| ||||| |||||||| |||| ||  || ||||||||||||  |||||||||||| ||    
T  22317911 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttctaggttgtagtttcgggaatttgggattt 22318009  T
Q  170 aggttttgaagttgtaattggttg 193  Q
    |||||| |||||||||||||||||    
T  22318010 aggtttagaagttgtaattggttg 22318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 29762808 - 29762898
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||| ||||    
T  29762808 cagagaagaagagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgaaactaaccttctttaat 29762898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 36727038 - 36727151
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||  |||| ||  ||||||||||||||| | || ||||| |||||    
T  36727038 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattggatttaacaagttgtaggttgtagtttttgggatttgagaatt 36727137  T
Q  170 aggttttgaagttg 183  Q
    |||||| |||||||    
T  36727138 aggtttagaagttg 36727151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 17906849 - 17906953
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||  |||| ||  ||||||||||||||  |||| ||||| ||||||    
T  17906849 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaagttgtaggttgtagtgttggggatttgagaatta 17906948  T
Q  171 ggttt 175  Q
    |||||    
T  17906949 ggttt 17906953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 229
Target Start/End: Original strand, 39694281 - 39694435
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggtt 174  Q
    ||||||| | ||||| |||||||||||| |||||||||| ||||| ||| ||  |||| ||  ||||||||||||||| ||||||||||||||||||| |    
T  39694281 gtaagggcgtgactagctttctctaattataagttgtatgattctgaaactggatttaacaagttgtaggttgtagttttgggaatttgggaattagggt 39694380  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 229  Q
    | || ||||||||| |||||    | |||||| |||| |||||||| ||||||||    
T  39694381 tagacgttgtaattagttgtcgtaatagtagagaatctgttgaattggtgtagaa 39694435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 4380606 - 4380665
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4380606 atcatctaacctaaggtaagggtgggactaactttctctaattctaagttgtataattct 4380665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 22208360 - 22208273
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||||||| |||||| || |||||||||| ||||||||||||||||||| |||||||||||  |  |||||||||||||    
T  22208360 gagaagaggagcaatctggtagagaccgatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattct 22208273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 19700213 - 19700109
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaa-aattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| ||| |  |||| ||| ||||||||||||||| || | ||||| | |||    
T  19700213 taaggtaagggtgggactaaccttctttaattctaagttgtataattctaagaatcggatttaacatgttgtaggttgtagttttgaggatttgaggatt 19700114  T
Q  170 aggtt 174  Q
    |||||    
T  19700113 aggtt 19700109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 12037125 - 12037184
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaac 91  Q
    ||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  12037125 gagaagaggagcaatctcgtagagtccgatcatctaatataaggtaagggtgggactaac 12037184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 23419493 - 23419411
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagtt 152  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||| | |||||  |||| ||||||||||| |||||||    
T  23419493 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatattgtaggatgtagtt 23419411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 23899987 - 23900100
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||| ||||||||||||||||||||||||  ||||| ||| | |||||| |||| ||  ||||||| ||||||| |||| ||||| ||| |    
T  23899987 taaggtaagggtgtgactaactttctctaattctaagtgatataactctgagaattgaatttaacaagttgtaggctgtagttttggggatttgagaact 23900086  T
Q  170 aggttttgaagttg 183  Q
    |||||| |||||||    
T  23900087 aggtttagaagttg 23900100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 22345257 - 22345186
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||| |||||||||||   ||||||||||| ||||||||||||||||||| |||||||||||    
T  22345257 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 22345186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 22356917 - 22356846
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||| |||||||||||   ||||||||||| ||||||||||||||||||| |||||||||||    
T  22356917 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 22356846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 23948315 - 23948211
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||||||||||||| |||||| |||| |||||||||||||||| ||||| |||| ||  |||| ||  ||||||||||||||| |||| ||||| |||||    
T  23948315 taaggtaagggtggtactaaccttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaatt 23948216  T
Q  170 aggtt 174  Q
    |||||    
T  23948215 aggtt 23948211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 175
Target Start/End: Complemental strand, 17218755 - 17218649
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaat 168  Q
    ||||| |||||||||||||||||||||||| ||||||||  ||||||||| ||||||   |||||||  ||||||||||| ||| || | ||||| ||||    
T  17218755 ttaagataagggtgggactaactttctctagttctaagtattataattctgaaaattagatttagcaatttgtaggttgttgttttgaggatttgagaat 17218656  T
Q  169 taggttt 175  Q
    |||||||    
T  17218655 taggttt 17218649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 22610226 - 22610319
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaa--tcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    |||||||||| ||| ||||||| |||| |  ||| | ||| |||||||||||||||||||||||||||||||  | |||||||| |||||||||    
T  22610226 gagaagaggaacaagcttgtagggtccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaa 22610319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 193
Target Start/End: Original strand, 42265510 - 42265631
Alignment:
Q  72 aaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||||||||||||||| ||   ||| ||| |||  ||| ||||| |||||||| |||| ||  ||||||||||||||| |||||||||||||||||    
T  42265510 aaggtaagggtgggactaacctttaataagtctgagta-tatgattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatta 42265608  T
Q  171 ggttttgaagttgtaattggttg 193  Q
    || || ||||||| || ||||||    
T  42265609 gggttagaagttgcaaatggttg 42265631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 17158963 - 17159000
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17158963 taaggtaagggtgggactaactttctctaattctaagt 17159000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 22254818 - 22254741
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttg 147  Q
    |||||||| |||||||||||||||||||||||||||||  ||||||||| |||||||  |||| ||  ||||||||||    
T  22254818 taaggtaatggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttg 22254741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 22583660 - 22583721
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagttta 132  Q
    |||||||||||||||| |||| |||| |||||||| ||||||||||||| ||||||| ||||    
T  22583660 taaggtaagggtgggattaacattctttaattctaggttgtataattctgaaattgaattta 22583721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 23479134 - 23479097
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23479134 taaggtaagggtgggactaactttctctaattctaagt 23479097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 23889851 - 23889790
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagttta 132  Q
    |||| |||||||| || |||||||||||||||||| ||||||||||||| ||||||| ||||    
T  23889851 taagctaagggtgagattaactttctctaattctaggttgtataattctgaaattgaattta 23889790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 26454760 - 26454723
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26454760 taaggtaagggtgggactaactttctctaattctaagt 26454723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 19880874 - 19880838
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaag 107  Q
    |||||||||||||||||||||||||||||||||||||    
T  19880874 taaggtaagggtgggactaactttctctaattctaag 19880838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 34758915 - 34758875
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataa 115  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  34758915 gtaagggtgggactaactttctctaattctacgttgtataa 34758875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 21514754 - 21514695
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||| ||||||||||||||||||||  ||||||||||  | ||||||||||||||    
T  21514754 atcatctaacttaaggtaagggtgggactagatttctctaataatgagttgtataattct 21514695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 23884262 - 23884192
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaa--tcatctaatttaaggtaagggtgggactaactttctctaa 100  Q
    |||||||||||||| |||||||||||  |  ||||||||| ||||||||||| ||||||| ||||||||||    
T  23884262 gagaagaggagcaaacttgtagagtctgaattcatctaatctaaggtaagggcgggactagctttctctaa 23884192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 141
Target Start/End: Complemental strand, 36305908 - 36305837
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgt 141  Q
    |||| ||||||||| || ||||||||| ||||| || ||||||||||| | |||||||||||||||| ||||    
T  36305908 ttaacgtaagggtgtgattaactttctttaattttaggttgtataattatgaaattgagtttagcatgttgt 36305837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 20879565 - 20879494
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaa--tcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||| |||||||||||| |  ||| | ||| ||||||||||||||||||||| |||| ||||    
T  20879565 gagaagaggagcaaacttgtagagtccgaattcaaccaatctaaggtaagggtgggactaaccttctttaat 20879494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 12577931 - 12577885
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattc 118  Q
    |||||||||||||||||||||||||||||||  | |||||||||||||    
T  12577931 taaggtaagggtgggactaactttctctaataat-agttgtataattc 12577885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 3273893 - 3273819
Alignment:
Q  120 aaaattgagtttagcatattgtaggttgtagttatgggaatttggg-aattaggttttgaagttgtaattggttg 193  Q
    |||||||| |||| ||  |||| |||||||||| |||||||||||| ||||||| || |||||||| ||||||||    
T  3273893 aaaattgaatttaacaggttgtgggttgtagttttgggaatttgggaaattagggttagaagttgtgattggttg 3273819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 16198888 - 16198851
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  16198888 taaggtaaaagtgggactaactttctctaattctaagt 16198851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 25657518 - 25657551
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagt 108  Q
    |||||||||||| |||||||||||||||||||||    
T  25657518 gtaagggtgggagtaactttctctaattctaagt 25657551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 21399769 - 21399717
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    ||||||||||||||||||| |||||||||||  |  ||||||| |||||||||    
T  21399769 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaa 21399717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 21794262 - 21794210
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    ||||||||||||||||||| |||||||||||  |  ||||||| |||||||||    
T  21794262 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaa 21794210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 36732401 - 36732473
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagttta 132  Q
    |||||||||  ||||||||||||| ||||| |||||||||||  |  ||||||||||||| |||  |||||||    
T  36732401 atcatctaacctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagagttta 36732473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 408 - 633
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  408 cagagaaaagaagaatcttgtgagaagaggaacaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 507  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  508 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 607  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
      ||||||||||||||||| ||||||    
T  608 aagttgaatttgtgtagaattgatgt 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 1316 - 1092
Alignment:
Q  12 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgt 111  Q
    |||||||||||||||||||||||||||| |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1316 agagaagagaagaatcttgtgagaagagtagcaattttgtagaatccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgt 1217  T
Q  112 ataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatc 211  Q
    |||||||| |||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1216 ataattctgaaattgagtttagcatgttgtaggttgtagttattgtaatttgggaattaggttttgaagttgtaattggttgttaatagaatagaaaatc 1117  T
Q  212 cgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||| ||||||    
T  1116 cgttgaatttgtgtagaattgatgt 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 181; Significance: 6e-98; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 34450 - 34226
Alignment:
Q  12 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgt 111  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34450 agagaagagaagaatcttgtgagaagagtagcaattttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaatttgt 34351  T
Q  112 ataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatc 211  Q
     ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  34350 ttaattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatcaggttttgaagttgtaattggttgttaatagagtagaaaatt 34251  T
Q  212 cgttgaatttgtgtagaagtgatgt 236  Q
     ||||||||||||||||| ||||||    
T  34250 tgttgaatttgtgtagaattgatgt 34226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 6002 - 5921
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagtt 152  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||| |||| ||| ||||||| |||||||    
T  6002 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattgaatttaacatgttgtaggatgtagtt 5921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 11215 - 11439
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||| || || ||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11215 cagagaagagaagaatcttgtgagaaaag-agtaatgttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttg 11313  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11314 tatatttctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 11413  T
Q  211 ccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||| ||||||    
T  11414 ccgttgaatttgtgtagaattgatgt 11439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 173; Significance: 4e-93; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 16 - 236
Target Start/End: Original strand, 21738 - 21958
Alignment:
Q  16 aagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||     
T  21738 aagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaatggtgggactaaatttctctaattctaagttgtatag 21837  T
Q  116 ttctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgtt 215  Q
    |||| ||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||    
T  21838 ttctgaaattgaatttagcatgttgtaggttgtatttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtaaaaaataagtt 21937  T
Q  216 gaatttgtgtagaagtgatgt 236  Q
    |||||||||||||| ||||||    
T  21938 gaatttgtgtagaattgatgt 21958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 58827 - 58880
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcat 64  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  58827 cagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcat 58880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 154; Significance: 8e-82; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 44 - 229
Target Start/End: Original strand, 12506 - 12691
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtag 143  Q
    ||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| || |||    
T  12506 aatcttgtagagtccgatcatctaatccaaggtaagggtgggaataactttctctaattctaagttgtataattctgaaattgagtttagcatgttatag 12605  T
Q  144 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12606 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtatagaa 12691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 74 - 236
Target Start/End: Complemental strand, 5432 - 5270
Alignment:
Q  74 ggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggt 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  5432 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 5333  T
Q  174 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  5332 tttgaagtcgtaattggttgttaatagagtagaaaatcctttgaatttgtgtagaattgatgt 5270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 24071 - 24235
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24071 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 24170  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttt 175  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24171 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttt 24235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 171
Target Start/End: Complemental strand, 30122 - 30023
Alignment:
Q  72 aaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||||||||||||||| |||  ||| |||||||  | ||||||| |||||||  |||| ||| ||||||||| ||||| || | ||||||||||||    
T  30122 aaggtaagggtgggactaaccttcaataaatctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgaggatttgggaatta 30024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 190 - 25
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  190 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 91  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  90 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 25  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 78125 - 78298
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  78125 cagataagagaataatcttgtgagaagaggagcaatcttgtagagtacgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 78224  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgt 184  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  78225 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgt 78298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 44 - 236
Target Start/End: Original strand, 21300017 - 21300209
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtag 143  Q
    ||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||| ||||||    
T  21300017 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaattaagtttagcatgttgtag 21300116  T
Q  144 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  21300117 gtagtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttaaatttgtgtagaattgatgt 21300209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 7485050 - 7484890
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggtt 174  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||||||||    
T  7485050 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 7484951  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  7484950 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagagatgt 7484890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 35 - 236
Target Start/End: Complemental strand, 19921732 - 19921525
Alignment:
Q  35 aagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtggga------ctaactttctctaattctaagttgtataattctaaaattgag 128  Q
    |||| ||||||||| |||||| || |||||||||| ||||||||||||||||      ||| ||||||||||||||||||||||||||||| ||||||||    
T  19921732 aagatgagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggagtgggactacctttctctaattctaagttgtataattctgaaattgag 19921633  T
Q  129 tttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 228  Q
    |||| ||| |||||||||||| |||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||    
T  19921632 tttaacatgttgtaggttgtaattatggaaatttgggaattaggttttgaagttataattagttgttaatagagtagaaaatctgttgaatttgtgtaga 19921533  T
Q  229 agtgatgt 236  Q
    | ||||||    
T  19921532 attgatgt 19921525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 20566598 - 20566448
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||        |||||    
T  20566598 taaggtaagggtgagactaactttctctaattcaaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggg--------aatta 20566507  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 229  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  20566506 ggttttgaagttgtaattggttgttaatagaatagaaaatccgtagaatttgtgtagaa 20566448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 62 - 220
Target Start/End: Complemental strand, 31622178 - 31622028
Alignment:
Q  62 catctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatt 161  Q
    |||||||| |||||||||||||||| ||||||||||||||| || ||||||||||||| |||||||||||||||| |||| | |||||        ||||    
T  31622178 catctaatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgta--------aatt 31622087  T
Q  162 tgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatt 220  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  31622086 tgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatt 31622028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 23199148 - 23199255
Alignment:
Q  12 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgt 111  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||  |  |||||    
T  23199148 agagaagagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgt 23199247  T
Q  112 ataattct 119  Q
    ||||||||    
T  23199248 ataattct 23199255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 21398584 - 21398696
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| || |||||||||||  |  ||||    
T  21398584 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggattagctttctctaataatgggttg 21398683  T
Q  111 tataattctaaaa 123  Q
    ||| |||||||||    
T  21398684 tatgattctaaaa 21398696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 36508628 - 36508757
Alignment:
Q  66 taatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttggg 165  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||  |||| ||  | ||||||||||||| ||| ||||||||    
T  36508628 taatttaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaacaggtggtaggttgtagttttggaaatttggg 36508727  T
Q  166 aattaggttttgaagttgtaattggttgtt 195  Q
    ||||| |||| |||||||||||||||||||    
T  36508728 aattatgtttagaagttgtaattggttgtt 36508757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 189
Target Start/End: Original strand, 21617928 - 21618047
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||| |||||||| |||| ||  ||||||||||||||| |||||||||| |||||    
T  21617928 taaggtaagggtgggactaactttctctaattctaagtgatataactctaaaaattgaatttaacaagttgtaggttgtagttttgggaatttgagaatt 21618027  T
Q  170 aggttttgaagttgtaattg 189  Q
    ||| || ||||||| |||||    
T  21618028 agggttagaagttgaaattg 21618047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 195
Target Start/End: Complemental strand, 31457012 - 31456888
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||| |||||||||||||||||| ||||| |||| ||||| ||| ||  |||| || |  ||||||||||||| ||| ||||||| |||||    
T  31457012 taaggtaagggtgagactaactttctctaattttaagtggtatgattctgaaactggatttaacacaaggtaggttgtagttttggaaatttggaaatta 31456913  T
Q  171 ggttttgaagttgtaattggttgtt 195  Q
    ||||| |||||||||||||||||||    
T  31456912 ggtttagaagttgtaattggttgtt 31456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 20469176 - 20469281
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||| |||||||  |||| ||  ||||||||||||||| |||| | ||| |||||    
T  20469176 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggacttgagaatt 20469275  T
Q  170 aggttt 175  Q
    ||||||    
T  20469276 aggttt 20469281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 22111881 - 22111762
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||| |||||||||||| ||||||||||||||| |  ||||||||||| | |||||||||||||||| |||| | ||||   | || ||||||| |||||    
T  22111881 ttaacgtaagggtgggattaactttctctaatttttggttgtataattttgaaattgagtttagcatgttgttgtttgtgaatttgcgaatttgagaatt 22111782  T
Q  170 aggttttgaagttgtaattg 189  Q
    ||||||| |||| |||||||    
T  22111781 aggttttcaagtcgtaattg 22111762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 26762514 - 26762424
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||| | |||   |||  ||||||||||||||||||||| |||| ||||    
T  26762514 cagagaagaaaagaatcttgtgagaagagaagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaat 26762424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 6551290 - 6551338
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6551290 taaggtaagggtgagactaactttctctaattctaagttgtataattct 6551338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 32607280 - 32607368
Alignment:
Q  35 aagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    |||||||||||||| |||||| || || ||||||| ||||||||||||||||||| |||||||||||  |  ||||||| |||||||||    
T  32607280 aagaggagcaatctcgtagagaccgattatctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaa 32607368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 10774664 - 10774771
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||| ||||| |||||||| |||| |||  ||||| |||||||| || ||||| |||||||    
T  10774664 taaggtaagggtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacat-gtgtagattgtagttttgtgaattcgggaatt 10774761  T
Q  170 aggttttgaa 179  Q
    ||| ||||||    
T  10774762 agggtttgaa 10774771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 10954141 - 10954038
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||| |||  |||||||||||||| ||||| | ||||||  |||| ||| ||||||| ||||||| |||  ||||  ||||||    
T  10954141 taaggtaagggtgggactaaccttccttaattctaagttgtgtaattatgaaattggatttaacatgttgtaggatgtagttttggagatttaagaatta 10954042  T
Q  171 ggtt 174  Q
    ||||    
T  10954041 ggtt 10954038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 194
Target Start/End: Complemental strand, 17876266 - 17876132
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatggga 158  Q
    |||||||||| ||| |||||||||  |||||| |||  ||||||| |||  ||| ||||| |||||||  |||| ||  | ||||||||||||| ||  |    
T  17876266 atcatctaatctaatgtaagggtgaaactaaccttcaataattctgagta-tatgattctgaaaattggatttaacaggtggtaggttgtagttctgaaa 17876168  T
Q  159 atttgggaattaggttttgaagttgtaattggttgt 194  Q
    ||||||||||||||||| ||||||||||||||||||    
T  17876167 atttgggaattaggtttagaagttgtaattggttgt 17876132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 108
Target Start/End: Complemental strand, 266091 - 266053
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagt 108  Q
    |||||||||||||||||||||||||||||||||||||||    
T  266091 ttaaggtaagggtgggactaactttctctaattctaagt 266053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 16063844 - 16063751
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    |||||||||||||| |||||||||||   | ||| | ||| ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  16063844 gagaagaggagcaagcttgtagagtctgtattcaaccaatctaaggtaagggtgggactacctttctctaataatgggttgtataattctaaaa 16063751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 17011780 - 17011743
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17011780 taaggtaagggtgggactaactttctctaattctaagt 17011743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 30616663 - 30616618
Alignment:
Q  74 ggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||    
T  30616663 ggtaagggtgggactgactttctctaattctaagttgtatgattct 30616618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 8503849 - 8503913
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttct 96  Q
    ||||| ||||||||||| |||||| || || ||||||| ||||||||||||||||||||| ||||    
T  8503849 gagaataggagcaatctcgtagagaccgattatctaatataaggtaagggtgggactaaccttct 8503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 21405628 - 21405751
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttggg-aat 168  Q
    ||||||||||||| ||||||| ||   ||||||| |||  ||| ||||| |||||||| |||| ||  |||| |||||||||| |||||||||||| |||    
T  21405628 taaggtaagggtgagactaacctttaataattctgagta-tatgattctgaaaattgaatttaacaggttgtgggttgtagttttgggaatttgggaaat 21405726  T
Q  169 taggttttgaagttgtaattggttg 193  Q
    |||| || |||||||||||||||||    
T  21405727 tagggttagaagttgtaattggttg 21405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 25249828 - 25249910
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagtt 152  Q
    |||||||||||| |||||||| |||| ||||| |||||| ||||||||| |||||||  |||| ||| ||||||||| |||||    
T  25249828 taaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25249910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 25313612 - 25313694
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagtt 152  Q
    |||||||||||| |||||||| |||| ||||| |||||| ||||||||| |||||||  |||| ||| ||||||||| |||||    
T  25313612 taaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 1627066 - 1627119
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    |||| ||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  1627066 ttaacgtaagggtgggactagctttctctaataatgagttgtataattctaaaa 1627119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 22111764 - 22111715
Alignment:
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 224  Q
    ||||||| |||||||||||||||||||| |||||||||  ||||||||||    
T  22111764 ttgaagtcgtaattggttgttaatagagcagaaaatccaatgaatttgtg 22111715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 18744926 - 18744878
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||||||||||||||||||||||||||||  |  |||||||||||||    
T  18744926 taaggtaagggtgggactaactttctctaataatgggttgtataattct 18744878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 31251931 - 31252011
Alignment:
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggt 191  Q
    ||||||||| ||||||  |||| ||  || |||||||||||| | |||||||| ||||||||||| |||||| ||||||||    
T  31251931 tataattctgaaattggatttaacaggttataggttgtagttttaggaatttgagaattaggtttagaagttataattggt 31252011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 30138059 - 30138098
Alignment:
Q  156 ggaatttgggaattaggttttgaagttgtaattggttgtt 195  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  30138059 ggaaattgggaattaggtttagaagttgtaattggttgtt 30138098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 14025796 - 14025837
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||| ||||||||||||||||||||| |||| ||||    
T  14025796 atcatctaatctaaggtaagggtgggactaaccttctttaat 14025837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 21504232 - 21504161
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||| ||||||||||||  | ||| | ||| |||||||| |||||||||||| |||| ||||    
T  21504232 gagaagaggagcaagcttgtagagtccgaattcaaccaatctaaggtaaaggtgggactaaccttctttaat 21504161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 696 - 861
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  696 taaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 795  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  796 ggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 3234 - 3069
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||| || |||||||||||||||||||||||||||||||||    
T  3234 taaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgactttagtatgttgtaggttgtagttatgggaatttgggaatta 3135  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3134 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 3069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 2558 - 2451
Alignment:
Q  129 tttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 228  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2558 tttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 2459  T
Q  229 agtgatgt 236  Q
    | ||||||    
T  2458 attgatgt 2451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 13392 - 13557
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  13392 taaggtaagggtgggactaactttctctaattccaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttttgggaatttgggaatta 13491  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13492 ggttttgaagttataattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 13557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 142; Significance: 1e-74; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 168999 - 169164
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  168999 taaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 169098  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  169099 ggttttgaacttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 169164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 67 - 236
Target Start/End: Complemental strand, 143667 - 143498
Alignment:
Q  67 aatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttggga 166  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||   |||||||||    
T  143667 aatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttattttaatttggga 143568  T
Q  167 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  143567 attatgttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 143498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 174333 - 174243
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||   |||  ||| ||||||||||||||||| |||| ||||    
T  174333 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaagtaagggtgggactaaccttctttaat 174243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 570 - 405
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||| |||||||| |||||    
T  570 taaggtaagggtgagactaactttctctaattctaagttgtatcattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaaatta 471  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  470 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 146775 - 146610
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  146775 taaggtatgggtgggactaacttactctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 146676  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  146675 ggttttgaagttataattggttgttaatagagtaggaaatccgttgaatttgtgtagaattgatgt 146610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 229
Target Start/End: Complemental strand, 79161 - 78958
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  79161 cagagaagataagaattttgtgagaagaggagcaatcttgtagagttcgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttg 79062  T
Q  111 tataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    ||||||||| ||||||||||||||||       ||||||||||        |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  79061 tataattctgaaattgagtttagcat-------gttgtagtta--------tgggaattaggttttgaagttgtaattggttgttaataaagtagaaaat 78977  T
Q  211 ccgttgaatttgtgtagaa 229  Q
    || ||||||||||||||||    
T  78976 ccattgaatttgtgtagaa 78958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 1217 - 1052
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  1217 taaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaattgaatttagcatgttttaggttgtagttatgggaatttgggaatta 1118  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  1117 ggttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaattgatgt 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 128; Significance: 3e-66; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 60 - 236
Target Start/End: Original strand, 328277 - 328455
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaattct--aagttgtataattctaaaattgagtttagcatattgtaggttgtagttatggg 157  Q
    |||||||||  ||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| ||| || ||||||||||||     
T  328277 atcatctaacctaaggtaagggtgggactaactttctctaattctctaagttgtataattctgaaattgagtttagcatgttgaagattgtagttatgga 328376  T
Q  158 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 236  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  328377 aatttgggaattaggtttcgaagttgtaattggttgttaatagagtagaaaatcagttgaatttgtgtagaattgatgt 328455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 70 - 226
Target Start/End: Complemental strand, 72989 - 72841
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||| ||| |||||||| |||||||||| |||  || ||||||||||||||||||||||||||| ||       ||||| |||| | ||||||| |||||    
T  72989 ttaacgtatgggtgggattaactttctccaatcttaggttgtataattctaaaattgagtttagtat-------gttgttgtta-gtgaatttgtgaatt 72898  T
Q  170 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 226  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  72897 aggttttgaagttgtaattggttgttaatagaatagaaaatccattgaatttgtgta 72841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 224
Target Start/End: Complemental strand, 75839 - 75691
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||| |||||||||||| ||||||||||||||  || ||||||||||||| ||||||||| |||||| |||| | |||||  | || |||||||||||||    
T  75839 ttaacgtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagtgtagcatgttgttgtttgtaaatttgtgaatttgggaatt 75740  T
Q  170 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 224  Q
    |||||      ||||||||||||||||||||| |||||||||| |||||||||||    
T  75739 aggtt------ttgtaattggttgttaatagaatagaaaatccattgaatttgtg 75691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 73180 - 73087
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    |||||||||||||| |||||||||||   || |||||||| |||||||||||||||||||||||||||||||  | |||||||| |||||||||    
T  73180 gagaagaggagcaagcttgtagagtctgaaaccatctaatgtaaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaa 73087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 175
Target Start/End: Complemental strand, 110227 - 110121
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaat 168  Q
    |||| ||||||||| ||||||||||||||||||||||||  ||||||||| |||||||| |||| ||  ||||||||||||||| |||| ||||| | ||    
T  110227 ttaacgtaagggtgagactaactttctctaattctaagtgatataattctgaaaattgaatttaacaagttgtaggttgtagttttggggatttgaggat 110128  T
Q  169 taggttt 175  Q
    |||||||    
T  110127 taggttt 110121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 76030 - 75937
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    |||||||| || || |||||||||||   || |||||||| ||||||||||||||||||| ||||||| |||  |  ||||||| |||||||||    
T  76030 gagaagagaagtaagcttgtagagtctgaaaccatctaatctaaggtaagggtgggactagctttctccaataatgggttgtatgattctaaaa 75937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 2666 - 2524
Alignment:
Q  12 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgt 111  Q
    ||||||||||||||||||||||||||||||||||||| |||||| || |||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  2666 agagaagagaagaatcttgtgagaagaggagcaatctcgtagagaccgatcatctaatctacggtaagggtgggactaactttctctaattctaagttgt 2567  T
Q  112 ataattctaaaattgagtttagcatattgtaggttgtagttat 154  Q
    |||||||| |||||||||||||||| |||||||||||||||||    
T  2566 ataattctgaaattgagtttagcatgttgtaggttgtagttat 2524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 29573 - 29711
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  29573 taaggtaagggtgggactaactttctataattctaagttgtataattctgaaattgagtttagcatgtcgtaggttgtagttatgggaatttgggaatta 29672  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaat 210  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  29673 ggttttgaagttgtaattggttgtaaatag-gtagaaaat 29711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 195
Target Start/End: Complemental strand, 21663 - 21539
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||  ||| ||  |||| || || |||| |||||||| ||| |||||||||||||    
T  21663 taaggtaagggtgggactagctttctctaattctaagttgtatgattcagaaactggatttaacagatggtagcttgtagttttggaaatttgggaatta 21564  T
Q  171 ggttttgaagttgtaattggttgtt 195  Q
     |||| |||||||||||||||||||    
T  21563 tgtttagaagttgtaattggttgtt 21539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 58 - 229
Target Start/End: Complemental strand, 19818 - 19655
Alignment:
Q  58 caatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatggg 157  Q
    |||||| | ||| ||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||  ||||||| |||        |    
T  19818 caatcaaccaatctaaggtaagggtgagactgactttctctaattctaagttgtataattctcaaattgagtttagcaagttgtaggctgt--------g 19727  T
Q  158 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 229  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19726 aatttgggaattaggtttttaagttgtaattggttgttaatagagtagaaaatccattgaatttgtgtagaa 19655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 35542 - 35418
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||  ||||| |||||||||||||||||    
T  35542 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggt--tagttttgggaatttgggaatta 35445  T
Q  171 ggttttgaagttgtaattggttgttaa 197  Q
    ||||||||||| |||||||||||||||    
T  35444 ggttttgaagtcgtaattggttgttaa 35418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 19316 - 19211
Alignment:
Q  14 agaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  19316 agaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatgatctaatctaacgtaagggtgggactaactttctctaattctaagttgtat 19217  T
Q  114 aattct 119  Q
    ||||||    
T  19216 aattct 19211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 5745 - 5637
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||  |  ||||    
T  5745 cagagaagagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttg 5646  T
Q  111 tataattct 119  Q
    |||||||||    
T  5645 tataattct 5637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 71 - 229
Target Start/End: Original strand, 112966 - 113125
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct--aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaat 168  Q
    |||| |||||||||||||||||||||||||||||||||  ||||| |||  |||||||| |||| ||  |||||||||||| || |||||||||||||||    
T  112966 taagataagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgtaggttgtaattttgggaatttgggaat 113065  T
Q  169 taggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 229  Q
    ||||||| ||||||||||||||||||| | | ||||||||||  |||||||| ||||||||    
T  113066 taggtttagaagttgtaattggttgttta-acagtagaaaatttgttgaattggtgtagaa 113125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 81620 - 81501
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa-ttgagtttagcatattgtaggttgtagttatgggaatttgggaat 168  Q
    |||||||||||||||||||||| ||| |||||||||| | | || ||||||||| |||| |||| ||  ||||||||||||||| |||||||||||||||    
T  81620 ttaaggtaagggtgggactaaccttcactaattctaaatgg-atgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaat 81522  T
Q  169 taggttttgaagttgtaattg 189  Q
    ||||||| |||||||||||||    
T  81521 taggtttagaagttgtaattg 81501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 229
Target Start/End: Original strand, 117807 - 117958
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct--aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaat 168  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||  |||||||| |||| ||  ||| || |||||        | |||||||||    
T  117807 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgaagattgta--------attttgggaat 117898  T
Q  169 taggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 229  Q
    ||||||| ||||||||||||||||||| | | |||||||||||  ||||||| | ||||||    
T  117899 taggtttagaagttgtaattggttgttta-acagtagaaaatctattgaattggcgtagaa 117958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 23832 - 23922
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| |||||||||||    
T  23832 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaattcaaggtaagggtgagactagctttctctaat 23922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 2941 - 2793
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||| |||||||||||||||| |||| | ||||        ||||||| ||||||    
T  2941 taaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgtgaatta 2850  T
Q  171 ggttttgaagttgt-aattggttgttaatagagtagaaaatccgttgaatttgtgta 226  Q
    ||||||||| | || ||||||||||||||||| |||||||||| |||||||||||||    
T  2849 ggttttgaattagtaaattggttgttaatagaatagaaaatcctttgaatttgtgta 2793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 74 - 195
Target Start/End: Original strand, 6688 - 6809
Alignment:
Q  74 ggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggt 173  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||| ||  |||| ||  | ||||||||||||| ||| ||||| ||||||||||    
T  6688 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 6787  T
Q  174 tttgaagttgtaattggttgtt 195  Q
    || |||||||||||||||||||    
T  6788 ttagaagttgtaattggttgtt 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 60 - 239
Target Start/End: Original strand, 1047 - 1226
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatggga 158  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||  ||||||||| |||||||| |||| ||  |||||||||| |||| || ||    
T  1047 atcatctaatctaaggtaagggtgggactaactttctcttattctaagtgttataattctgaaaattgaatttaacaagttgtaggttggagttttgaga 1146  T
Q  159 atttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgtcca 239  Q
    |||||||| ||||| || |||||||||||| |||| |   ||||||| ||||| ||||||||  ||||||| | |||||||    
T  1147 atttgggatttagggttagaagttgtaattagttgatttaagagtag-aaatctgttgaattgatgtagaaataatgtcca 1226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 11059 - 10947
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||| |||||||||||||| |||| |||||||||||  |  ||||    
T  11059 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagaatctgatcatctaatataaggtaagggtggaactagctttctctaataatgggttg 10960  T
Q  111 tataattctaaaa 123  Q
    ||| |||||||||    
T  10959 tatgattctaaaa 10947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 10851 - 10741
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||| |||||||||||| ||||||||||||||| || ||||||||||||| |||||||||||||||| |||| | ||||        |||||||||||||    
T  10851 ttaatgtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgggaatt 10760  T
Q  170 aggttttgaagttgtaatt 188  Q
    |||||||||||||||||||    
T  10759 aggttttgaagttgtaatt 10741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 13493 - 13572
Alignment:
Q  12 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaac 91  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13493 agagaagagaagaatcttgtgagaagaggattaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaac 13572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 67; Significance: 7e-30; HSPs: 6)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 226
Target Start/End: Complemental strand, 5310 - 5167
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggtt 174  Q
    |||||||||||| ||||||||||||||  || ||||||||||||| ||||||||||| |||| |||| | ||||        |||||||||||||| |||    
T  5310 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattacgtt 5219  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 226  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  5218 ttgaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 5167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 226
Target Start/End: Complemental strand, 11430 - 11287
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggtt 174  Q
    |||||||||||| ||||||||||||||  || ||||||| ||||| ||||||||||| |||| |||| | ||||        ||||||||||||||||||    
T  11430 gtaagggtgggattaactttctctaatcttaggttgtatcattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattaggtt 11339  T
Q  175 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 226  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  11338 ttgaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 11287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 5545 - 5458
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| |||||||||||  | ||||||||||||||    
T  5545 gagaagaggagcaatctcgtagagaccaatcatctaatctaaggtaagggtgggactacctttctctaataatgagttgtataattct 5458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 225
Target Start/End: Complemental strand, 19759 - 19605
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||| ||||| |||||| ||| ||||||||||  || ||| ||||||||| |||||||||||||||| |||| | ||||   | || ||||||| |||||    
T  19759 ttaacgtaagtgtgggattaaatttctctaatcttaggttatataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgagaatt 19660  T
Q  170 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgt 225  Q
    ||||| |||||||||||||| ||||||||| | |||||||||| ||||||||||||    
T  19659 aggttatgaagttgtaattgattgttaata-aatagaaaatccattgaatttgtgt 19605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 11707 - 11639
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaa 100  Q
    ||||||||||||||||| | |||| || |||||||||| |||| ||||||||||||||| |||||||||    
T  11707 gagaagaggagcaatctcgcagagaccgatcatctaatgtaagataagggtgggactaaatttctctaa 11639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 19947 - 19856
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    ||||||||||||||||| |||||  || |||||||||| |||||||||||| ||||||  ||||||||||  |  ||||||| |||||||||    
T  19947 gagaagaggagcaatctcgtagaaaccgatcatctaatctaaggtaagggtaggactagatttctctaataatgggttgtatgattctaaaa 19856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 71 - 229
Target Start/End: Original strand, 10755 - 10911
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||  |||| ||  ||||||||| ||||| |||||||||||||||||    
T  10755 taaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaggttgtaggtt-tagtt-tgggaatttgggaatta 10852  T
Q  171 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 229  Q
    || || |||||||||||||||||||   | |||||| ||||  ||||||| ||||||||    
T  10853 gggttagaagttgtaattggttgttgtaatagtagagaatctattgaattggtgtagaa 10911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 5045 - 5087
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5045 taaggtaagggtgggactaactttctctaattctaagttgtat 5087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 1989 - 1952
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  1989 taaggaaagggtgggactaactttatctaattctaagt 1952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 71 - 191
Target Start/End: Original strand, 4709 - 4830
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| ||  |||||||||| ||||   ||||||||| ||||    
T  4709 taaggtaagggtgggactaactttctctaattctaagtagtataattctgaaaattgaatttaacaagttgtaggttgaagtttgtggaatttggaaatt 4808  T
Q  170 aggttttgaagttgtaattggt 191  Q
    |||||| |||||||| ||||||    
T  4809 aggtttagaagttgtcattggt 4830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 222
Target Start/End: Original strand, 26638 - 26779
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggt 173  Q
    |||||||||||| ||||||||| ||||| || ||||||||||||| ||||||||||||||||| |||| | ||||        |||||||||||||||||    
T  26638 gtaagggtgggattaactttctttaattttaggttgtataattctgaaaattgagtttagcatgttgttgtttgt--------gaatttgggaattaggt 26729  T
Q  174 tttgaagttgtaatt-ggttgttaatagagtagaaaatccgttgaatttg 222  Q
    |||||| | |||||| |||||||||||||||||||||||| |||||||||    
T  26730 tttgaattagtaatttggttgttaatagagtagaaaatccattgaatttg 26779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 2396 - 2502
Alignment:
Q  12 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgt 111  Q
    |||||||||| ||||||||||||||||| |||||||||||| ||||| | |||||||||||||||||||||||||||| |||||||||||  |  |||||    
T  2396 agagaagagaggaatcttgtgagaagag-agcaatcttgtaaagtccgaacatctaatttaaggtaagggtgggactagctttctctaataatgggttgt 2494  T
Q  112 ataattct 119  Q
    ||||||||    
T  2495 ataattct 2502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 17913 - 17988
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17913 aatcttgtagaatccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattct 17988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 195
Target Start/End: Complemental strand, 16650 - 16532
Alignment:
Q  77 aagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggtttt 176  Q
    |||||||||||||| ||| |||||||||||||||||| ||||| ||| ||  |||| ||| | ||||||||||||| ||| ||||||| ||||||||||     
T  16650 aagggtgggactaaatttatctaattctaagttgtatgattctgaaactggatttaacatgtggtaggttgtagttttggaaatttggcaattaggttta 16551  T
Q  177 gaagttgtaattggttgtt 195  Q
    |||||||||||||||||||    
T  16550 gaagttgtaattggttgtt 16532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 192
Target Start/End: Original strand, 135504 - 135625
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||| ||| |||||||||||| |||||||||| |||||||| |||| ||  ||||||||||||||| ||||||||||||||||    
T  135504 taaggtaagggtgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 135602  T
Q  170 aggttttgaagttgtaattggtt 192  Q
    ||  || ||||||| ||||||||    
T  135603 agagttagaagttgaaattggtt 135625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 67173 - 67060
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||| |||||||  |||| || |||||||||||||||| | |||||||||||||     
T  67173 taaggtaaaggtgggactaactttctctaattcgaagtggtataattctgaaaattggatttaacaaattgtaggttgtagttttaggaatttgggaata 67074  T
Q  170 aggttttgaagttg 183  Q
    |||||| |||||||    
T  67073 aggtttagaagttg 67060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 11100 - 11212
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttg 110  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||| |||| |||| |||||||||||||||| |||||||| |||||||||||  |  ||||    
T  11100 cagagaagagaagaatcttctgagaagagaagcaatcttttagtgtccgatcacctaatttaaggtaaggatgggactagctttctctaataatgggttg 11199  T
Q  111 tataattctaaaa 123  Q
    ||| |||||||||    
T  11200 tatgattctaaaa 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 8694 - 8571
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttggg-aat 168  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||| ||||| |||||||| |||| ||  ||||||||||||||| |||||||||||| |||    
T  8694 taaggtaagggtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaaat 8596  T
Q  169 taggttttgaagttgtaattggttg 193  Q
    |||| || |||||||||||||||||    
T  8595 tagggttagaagttgtaattggttg 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 18810 - 18744
Alignment:
Q  161 ttgggaattaggttttga-agttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 226  Q
    |||||||||||||||||| | ||| |||| ||||||||| || |||||||||| | |||||||||||    
T  18810 ttgggaattaggttttgagaattgcaattagttgttaattgaatagaaaatccatagaatttgtgta 18744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 28662 - 28583
Alignment:
Q  12 agagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaac 91  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  28662 agagaagaaaataatcttgtgagaagaggagcaatcttgtagagtcctatcatctaatctaaggtaagagtgggactaac 28583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 61821 - 61896
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||| ||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  61821 aatcttgtagaatccgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattct 61896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 193
Target Start/End: Original strand, 3053 - 3174
Alignment:
Q  72 aaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||||||||||||||| |||  ||||||||||| |||| ||||| |||||||| |||| ||  ||||||||||||||| ||||||||| |||||||    
T  3053 aaggtaagggtgggactaaccttcaataattctaagt-gtattattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttaggaatta 3151  T
Q  171 ggttttgaagttgtaattggttg 193  Q
    || || |||||||||||||||||    
T  3152 gggttagaagttgtaattggttg 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 2020 - 2143
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaat 168  Q
    ||||| ||||||||||| |||| ||| |||||||||||| |||| ||| | |||||||| |||| ||| ||||||||||||||| ||| |||||||||||    
T  2020 ttaagctaagggtgggattaaccttcactaattctaagt-gtatgattttgaaaattgaatttaacatgttgtaggttgtagttttggaaatttgggaat 2118  T
Q  169 taggttttgaagttgtaattggttg 193  Q
    |||||||  ||||||||||||||||    
T  2119 taggtttataagttgtaattggttg 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 7329 - 7205
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgg-gaat 168  Q
    |||||| |||||||||||||| |||| |||||||||||||||||||||| |||||||  |||  ||| ||||||||| ||||| |||||||||||  |||    
T  7329 taaggtgagggtgggactaacattctttaattctaagttgtataattctgaaaattggatttgacatgttgtaggttatagttttgggaatttggaaaat 7230  T
Q  169 taggttttgaagttgtaattggttg 193  Q
    |||| || |||||||||||||||||    
T  7229 tagggttagaagttgtaattggttg 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 195
Target Start/End: Original strand, 106051 - 106175
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||  ||| ||  |||| ||  | ||||  ||||||| ||| |||||||||||||    
T  106051 taaggtaagggtgtgactaactttctctaattctaagttgtatgattcggaaactggatttaacaggtggtagactgtagttttggaaatttgggaatta 106150  T
Q  171 ggttttgaagttgtaattggttgtt 195  Q
    ||||| || ||||||||||||||||    
T  106151 ggtttagacgttgtaattggttgtt 106175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 188
Target Start/End: Original strand, 20086 - 20202
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||| ||||||||| ||| |||||||||||| |||||||||| |||||||| |||| ||  ||||||||| ||||| ||||||||||||||||    
T  20086 taaggtaagggcgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttatagtt-tgggaatttgggaatt 20183  T
Q  170 aggttttgaagttgtaatt 188  Q
    | |||| ||||||||||||    
T  20184 atgtttagaagttgtaatt 20202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 10386 - 10476
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| | |||   |||  ||||||||||||||||||||| |||| ||||    
T  10386 cagagaagagaataatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaat 10476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 3986 - 3941
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagt 56  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||    
T  3986 cagagaagagaagaatcttgtgagaagatgagcaatcttatagagt 3941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 20006 - 19905
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||  |||| ||  ||||||||||||||| |||| ||||| |||||    
T  20006 taaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tggggatttgagaatt 19908  T
Q  170 agg 172  Q
    |||    
T  19907 agg 19905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 13911 - 13878
Alignment:
Q  160 tttgggaattaggttttgaagttgtaattggttg 193  Q
    |||||||||||||||| |||||||||||||||||    
T  13911 tttgggaattaggtttagaagttgtaattggttg 13878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 2050 - 1957
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattct 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||   ||   ||||||||||||||||||||| |||  |||||||    
T  2050 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattatgctaaggtaagggtgggactaaccttcaataattct 1957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 60947 - 60843
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||||||||| || ||||||| |||| |||||||||||||||||||||| | |||||| |||| ||| ||||||||||||||| || | ||||| |||||    
T  60947 taaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaatt 60848  T
Q  170 aggtt 174  Q
    |||||    
T  60847 aggtt 60843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 2189 - 2248
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2189 atcatctaacctaaggtaagggtgggactaattttctctaattctaagttgtataattct 2248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 39
Target Start/End: Original strand, 2141 - 2169
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagag 39  Q
    |||||||||||||||||||||||||||||    
T  2141 cagagaagagaagaatcttgtgagaagag 2169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 5294 - 5353
Alignment:
Q  60 atcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5294 atcatctaacctaaggtaagggtgggactaactttctctaattttaagttgtataattct 5353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 39
Target Start/End: Original strand, 5149 - 5177
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagag 39  Q
    |||||||||||||||||||||||||||||    
T  5149 cagagaagagaagaatcttgtgagaagag 5177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 39
Target Start/End: Original strand, 5246 - 5274
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagag 39  Q
    |||||||||||||||||||||||||||||    
T  5246 cagagaagagaagaatcttgtgagaagag 5274  T

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Target: scaffold0010 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 126305 - 126407
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||  |||| ||  |||||| |||||||| || | ||||| ||||||    
T  126305 taaggtaagg-tgggactaactttctctaattctaagttgtatgattctgaaattggatttaacaagttgtagattgtagttttgaggatttgagaatta 126403  T
Q  171 ggtt 174  Q
    ||||    
T  126404 ggtt 126407  T

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Target: scaffold0261 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 6620 - 6686
Alignment:
Q  158 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 224  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||| ||||  ||||||||||    
T  6620 aatttgggaattaggttttgatgtcgtaattggttgttaatagagtagaagatccaatgaatttgtg 6686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 12001 - 11956
Alignment:
Q  11 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagt 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12001 cagagaagagaagaatcttgtgagaagaggagcaatcttgtagagt 11956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 18613 - 18670
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  18613 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaat 18670  T

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Target: scaffold0328; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 18731 - 18764
Alignment:
Q  160 tttgggaattaggttttgaagttgtaattggttg 193  Q
    |||||||||||||||| |||||||||||||||||    
T  18731 tttgggaattaggtttagaagttgtaattggttg 18764  T

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Target: scaffold0041 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 5712 - 5761
Alignment:
Q  76 taagggtgggactaactttctctaattctaagttgtataattctaaaatt 125  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5712 taagggtgggactaactttctctaattctaagttgtataattctgaaatt 5761  T

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Target: scaffold0071 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 15324 - 15276
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15324 taaggtaagggtgggactaactttctctaattctaagttgtattattct 15276  T

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Target: scaffold0031 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 127302 - 127373
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||||||||| |||||||||||   ||||||||||| ||||||||||||||||||| |||||||||||    
T  127302 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 127373  T

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Target: scaffold0007 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 198
Target Start/End: Original strand, 158822 - 158949
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa-ttgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||| |||  ||||||| |||  ||| ||||||||| |||  |||| ||  ||||||||||||||| ||||||||||||||||    
T  158822 taaggtaagggtgggactaaccttcaataattctgagta-tatgattctaaaaattggatttaacaagttgtaggttgtagttttgggaatttgggaatt 158920  T
Q  170 aggttttgaagttgtaattggttgttaat 198  Q
    ||| || ||||||| || |||||| ||||    
T  158921 agggttagaagttgcaaatggttgataat 158949  T

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Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 18701 - 18749
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||| ||||||||| ||||||||||||||  | ||||||||||||||    
T  18701 taaggtgagggtgggattaactttctctaataatgagttgtataattct 18749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 4718 - 4612
Alignment:
Q  86 actaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 185  Q
    |||||| ||| ||||| |||||| |||| ||||||||||||| |||| ||  || |||||||| ||| |||||||||| ||||||||||| |||||||||    
T  4718 actaaccttcactaatcctaagt-gtatgattctaaaattgaatttaacaggttttaggttgtggttttgggaatttgagaattaggtttagaagttgta 4620  T
Q  186 attggttg 193  Q
    ||| ||||    
T  4619 attagttg 4612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 1855 - 1917
Alignment:
Q  79 gggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgt 141  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||| |||| ||| ||||    
T  1855 gggtgggactaactttctctaattctaagtggtataattctgaaattgaatttaacatgttgt 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 179
Target Start/End: Complemental strand, 5418 - 5311
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||| ||||| |||||||| |||| |||  ||||| |||||||| || ||||| |||||||    
T  5418 taaggtaagggtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacat-gtgtagattgtagttttgtgaattcgggaatt 5321  T
Q  170 aggttttgaa 179  Q
    ||| ||||||    
T  5320 agggtttgaa 5311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 4992 - 4944
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  4992 taaggtaagggtgggactaaccttctttaattctaagttgtataattct 4944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 4437 - 4333
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||||||| | |||||||||| |||| |||||||||||||||||||||| | || ||  |||| ||| ||||||||||||||| || | ||||| |||||    
T  4437 taaggtaacgatgggactaaccttctttaattctaagttgtataattctgagaactggatttaacatgttgtaggttgtagttttgaggatttgagaatt 4338  T
Q  170 aggtt 174  Q
    |||||    
T  4337 aggtt 4333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 170
Target Start/End: Complemental strand, 29440 - 29340
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||  |||| |||||||||||||||| ||||| |||| ||  |||| ||  ||||||||||||||| |||| ||||| |||||    
T  29440 taaggtaagggtgggactaatcttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaatt 29341  T
Q  170 a 170  Q
    |    
T  29340 a 29340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 398614 - 398510
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||||||| | |||||  |||| ||| ||||||| ||||||| || | ||||  |||||    
T  398614 taaggtaagggtgggactaaccttctttaattctaggttgtataattctgagaattggatttaacatgttgtaggatgtagttttgaggatttaagaatt 398515  T
Q  170 aggtt 174  Q
    |||||    
T  398514 aggtt 398510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 3383 - 3452
Alignment:
Q  33 agaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||||||| ||| ||||||||  ||||||||||| ||||||||||||||||||| |||||||||||    
T  3383 agaagaggagcaagctt-tagagtccgaaatcatctaatctaaggtaagggtgggactagctttctctaat 3452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 2960 - 2885
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||||  ||||| |||| ||||||||||||||||||| |||||||||||  |  |||||||||||||    
T  2960 aatcttgtagagtctgatcatttaatctaaggtaagggtgggactagctttctctaataatgggttgtataattct 2885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 96446 - 96347
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggtt 174  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||| ||| ||  |||| ||  ||||||||||||||| || | ||| | ||||||||||    
T  96446 gtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaatggatttaacaagttgtaggttgtagttttgaggattggagaattaggtt 96347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 108
Target Start/End: Original strand, 195 - 233
Alignment:
Q  70 ttaaggtaagggtgggactaactttctctaattctaagt 108  Q
    |||||||||||||||||||||||||||||||||||||||    
T  195 ttaaggtaagggtgggactaactttctctaattctaagt 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 5081 - 5044
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5081 taaggtaagggtgggactaactttctctaattctaagt 5044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 9012 - 8975
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9012 taaggtaagggtgggactaactttctctaattctaagt 8975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 5081 - 5044
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5081 taaggtaagggtgggactaactttctctaattctaagt 5044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 193
Target Start/End: Original strand, 28319 - 28451
Alignment:
Q  61 tcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaa 159  Q
    |||| ||| |||||||||||||||||||| | |||  ||||||| |||  ||| ||||| |||||||  |||| ||  ||||||||||||||| ||||||    
T  28319 tcatttaaattaaggtaagggtgggactacccttcaataattctgagta-tatgattctgaaaattggatttaacaagttgtaggttgtagttttgggaa 28417  T
Q  160 tttgggaattaggttttgaagttgtaattggttg 193  Q
    ||||| ||||||| || ||||||| || ||||||    
T  28418 tttggaaattagggttagaagttgcaaatggttg 28451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 21149 - 21112
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21149 taaggtaagggtgggactaactttctctaattctaagt 21112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 34164 - 34127
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34164 taaggtaagggtgggactaactttctctaattctaagt 34127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 69853 - 69890
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||||||    
T  69853 taaggtaagggtgggactaactttctctaattctaagt 69890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 179
Target Start/End: Complemental strand, 9111 - 9004
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattctaaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 170  Q
    ||||||||||||||||||||| |||  ||||||| |||  | ||||||| ||| ||  |||| ||  ||||||||||||||| | |||||||||||||||    
T  9111 taaggtaagggtgggactaaccttcagtaattctgagta-tgtaattctgaaactggatttaacaggttgtaggttgtagtttttggaatttgggaatta 9013  T
Q  171 ggttttgaa 179  Q
    || ||||||    
T  9012 gggtttgaa 9004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 12379 - 12323
Alignment:
Q  138 ttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgt 194  Q
    ||||||||||||||| ||| |||||| ||||||||||| ||||||||||| ||||||    
T  12379 ttgtaggttgtagttttggaaatttgagaattaggtttagaagttgtaataggttgt 12323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 15576 - 15638
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactt 93  Q
    |||||||||||||| ||| ||||||||  ||||||||||| |||||||||||||||||||||||    
T  15576 gagaagaggagcaagctt-tagagtccgaaatcatctaatctaaggtaagggtgggactaactt 15638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 186
Target Start/End: Complemental strand, 31160 - 31046
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    ||||||||||||||||||||| |||  ||||||| || | | ||||||| |||||||  |||| ||  ||||||||||||||| ||||||||||||||||    
T  31160 taaggtaagggtgggactaaccttcaataattctgag-tatgtaattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgggaatt 31063  T
Q  170 aggttttgaagttgtaa 186  Q
    ||| ||  |||||||||    
T  31062 agggttaaaagttgtaa 31046  T

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Target: scaffold0065 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 52544 - 52648
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||| |||||||||||||||| |||  |||||||||||||| ||||||| | |||||  |||| ||| ||||||| ||||||| || | ||||| |||||    
T  52544 taagataagggtgggactaaccttcattaattctaagttgtgtaattctgagaattggatttaacatgttgtaggatgtagttttgaggatttgagaatt 52643  T
Q  170 aggtt 174  Q
    |||||    
T  52644 aggtt 52648  T

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Target: scaffold0116 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 35464 - 35586
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatt 169  Q
    |||||||||| |||||||||| ||   ||||||| |||  ||| ||||| |||||||| |||| ||  ||||||||||||||| ||||||||||||||||    
T  35464 taaggtaaggatgggactaacctttattaattctgagta-tatgattctgaaaattgaatttaacaacttgtaggttgtagttttgggaatttgggaatt 35562  T
Q  170 aggttttgaagttgtaattggttg 193  Q
    | | || ||||||| || ||||||    
T  35563 aaggttagaagttgcaaatggttg 35586  T

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Target: scaffold0505 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 5000 - 4958
Alignment:
Q  59 aatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  5000 aatcatctaatataaggtaagggtgggactagctttctctaat 4958  T

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Target: scaffold0086 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 35145 - 35238
Alignment:
Q  32 gagaagaggagcaatcttgtagagtccaa--tcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctaaaa 123  Q
    |||||||||||||| |||||||||||| |  ||| | ||| |||||||||||||| |||| ||||| |||||  |  |||||||||||||||||    
T  35145 gagaagaggagcaagcttgtagagtccgaattcaaccaatctaaggtaagggtggtactagctttccctaataatgggttgtataattctaaaa 35238  T

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Target: scaffold0061 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 14546 - 14634
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||| |||||| ||| ||||||||  ||||||||||| ||||||||||||| ||||| |||||||||||  |  |||||||||||||    
T  14546 gagaagaagagcaagctt-tagagtccggaatcatctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattct 14634  T

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Target: scaffold0061; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 23604 - 23692
Alignment:
Q  32 gagaagaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||| |||||| ||| ||||||||  ||||||||||| ||||||||||||| ||||| |||||||||||  |  |||||||||||||    
T  23604 gagaagaagagcaagctt-tagagtccggaatcatctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattct 23692  T

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Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 6416 - 6383
Alignment:
Q  75 gtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||||||||||||||||||||||||||||    
T  6416 gtaagggtgggactaactttctctaattctaagt 6383  T

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Target: scaffold0046 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 21777 - 21814
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    |||||||||| |||||||||||||||||||||||||||    
T  21777 taaggtaaggatgggactaactttctctaattctaagt 21814  T

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Target: scaffold0034 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 29216 - 29253
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagt 108  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  29216 taaggtaagagtgggactaactttctctaattctaagt 29253  T

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Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 26776 - 26731
Alignment:
Q  74 ggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    ||||||||||||| ||||||||||||||| || |||||||||||||    
T  26776 ggtaagggtgggattaactttctctaattttaggttgtataattct 26731  T

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Target: scaffold0070 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 11232 - 11193
Alignment:
Q  44 aatcttgtagagtccaatcatctaatttaaggtaagggtg 83  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  11232 aatcttgtagagtccgatcatctaatctaaggtaagggtg 11193  T

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Target: scaffold0148 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 8931 - 8866
Alignment:
Q  38 aggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||||||| |||||||||||   ||||||||||| |||| |||||||||||||| |||| ||||||    
T  8931 aggagcaagcttgtagagtctgaaatcatctaatctaagttaagggtgggactagctttatctaat 8866  T

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Target: scaffold0411 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 13417 - 13505
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct-aaaattgagtttagcatattgtaggttgtagttatgggaa 159  Q
    ||||||||||||||||||||| |||  ||||||||||  || ||||||| |||| ||| |||| ||  ||||||||||||||| ||||||    
T  13417 taaggtaagggtgggactaaccttcaataattctaag-ggtttaattctgaaaactgaatttaacaagttgtaggttgtagttttgggaa 13505  T

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Target: scaffold0308 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 13443 - 13370
Alignment:
Q  120 aaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttg 193  Q
    |||||||| |||| ||  |||||||||| |||| ||||||||||||||||||| ||  |||||| || ||||||    
T  13443 aaaattgaatttaacaagttgtaggttgaagttttgggaatttgggaattagggttaaaagttgcaaatggttg 13370  T

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Target: scaffold0730 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 6468 - 6535
Alignment:
Q  36 agaggagcaatcttgtagagtcc--aatcatctaatttaaggtaagggtgggactaactttctctaat 101  Q
    |||| ||||| |||||||||||   ||||||||||| |||||||| || ||||||| |||||||||||    
T  6468 agagaagcaagcttgtagagtctgaaatcatctaatctaaggtaaaggcgggactacctttctctaat 6535  T

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Target: scaffold0625 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 5861 - 5909
Alignment:
Q  71 taaggtaagggtgggactaactttctctaattctaagttgtataattct 119  Q
    |||||||| ||||  |||||||||||||||||||||||  |||||||||    
T  5861 taaggtaaaggtgatactaactttctctaattctaagtgttataattct 5909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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