View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9612A_low_177 (Length: 243)
Name: NF9612A_low_177
Description: NF9612A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9612A_low_177 |
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Alignment Details
Target: chr7 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 15 - 224
Target Start/End: Original strand, 3790132 - 3790340
Alignment:
| Q |
15 |
aacaatatctctaaagttgaagggagcttcgcaatgccatgctagatgatcaccttcctcgcccttcccctcgtatgtgtctatgagtagtcatactcaa |
114 |
Q |
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| T |
3790132 |
aacaatagatctaaagttgaagggagcttcgcaatgccatgctagatgatcaccttcctcttccttcccctcttatgtgtctatgagtagtcatactcaa |
3790231 |
T |
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| Q |
115 |
caaattaattgaaaacaaattagaataatcataagcgagataagttttaattgagatgatgagtttannnnnnnncttgttgagaaatatgactatttgc |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
3790232 |
caaattaattgaaaacaaattagaataatcataagcgagataagttctaattgagatgatgagttta-ttttttccttgttgagaaatatgactatttgc |
3790330 |
T |
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| Q |
215 |
tcctattcct |
224 |
Q |
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|||||||||| |
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| T |
3790331 |
tcctattcct |
3790340 |
T |
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