View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9612A_low_194 (Length: 234)
Name: NF9612A_low_194
Description: NF9612A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9612A_low_194 |
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Alignment Details
Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 4 - 222
Target Start/End: Original strand, 3273552 - 3273770
Alignment:
| Q |
4 |
ataaccaaatgtcattccagcaacccacattgatggtgaggatggtaaaaatatggtaggaaatagtgctatagaagcaaacacataaatagctaactcc |
103 |
Q |
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| T |
3273552 |
ataaccaaatgtcattccagcaacccacattgatggtgaggatggtaaaaatatggtaggaaatagtgctatagaagcaaacacataaatagctaactcc |
3273651 |
T |
|
| Q |
104 |
gatgtggtgaatgtgtctctctgccaaattattactggaataaacacctgaaaaataaaagctatgttaattatcattgagataggtaattatgcattgt |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3273652 |
gatgtggtgaatgtgtctctctgccaaattattactggaataaacacctgaaaaataaaagctatgttaattatcattgagataggtaattatgcattgt |
3273751 |
T |
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| Q |
204 |
attttatgaaaattgaaag |
222 |
Q |
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||||||||||||||||||| |
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| T |
3273752 |
attttatgaaaattgaaag |
3273770 |
T |
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