View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9612A_low_233 (Length: 221)

Name: NF9612A_low_233
Description: NF9612A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9612A_low_233
NF9612A_low_233
[»] chr2 (9 HSPs)
chr2 (1-216)||(41569122-41569324)
chr2 (1-41)||(670360-670400)
chr2 (1-41)||(17779525-17779565)
chr2 (1-37)||(28679459-28679495)
chr2 (1-41)||(29051543-29051583)
chr2 (1-41)||(31389690-31389730)
chr2 (1-38)||(18177083-18177120)
chr2 (1-41)||(433993-434033)
chr2 (1-41)||(7552700-7552740)
[»] chr8 (19 HSPs)
chr8 (1-41)||(13971263-13971303)
chr8 (1-41)||(1633778-1633818)
chr8 (1-41)||(30135902-30135942)
chr8 (1-41)||(32843830-32843870)
chr8 (1-41)||(36110281-36110321)
chr8 (1-44)||(1871500-1871543)
chr8 (1-42)||(7955894-7955935)
chr8 (3-43)||(6968119-6968159)
chr8 (1-41)||(16966928-16966968)
chr8 (1-41)||(34591407-34591447)
chr8 (1-44)||(7586048-7586091)
chr8 (1-40)||(37783860-37783899)
chr8 (12-41)||(9208219-9208248)
chr8 (1-38)||(29867191-29867228)
chr8 (15-43)||(5864350-5864378)
chr8 (1-41)||(11017948-11017988)
chr8 (1-37)||(18651503-18651539)
chr8 (1-41)||(32847574-32847614)
chr8 (1-41)||(33589119-33589159)
[»] chr4 (26 HSPs)
chr4 (1-44)||(14451536-14451579)
chr4 (1-43)||(53152207-53152249)
chr4 (1-41)||(5932046-5932086)
chr4 (1-41)||(9118752-9118792)
chr4 (1-41)||(37066130-37066170)
chr4 (1-41)||(41486031-41486071)
chr4 (1-41)||(47965880-47965920)
chr4 (1-44)||(17476019-17476062)
chr4 (1-42)||(30079989-30080030)
chr4 (1-42)||(33899213-33899254)
chr4 (1-42)||(50272960-50273001)
chr4 (1-41)||(2256219-2256259)
chr4 (1-41)||(12112770-12112810)
chr4 (1-41)||(23822136-23822176)
chr4 (1-41)||(51194412-51194452)
chr4 (1-41)||(54669472-54669512)
chr4 (1-43)||(21260441-21260483)
chr4 (1-43)||(51746363-51746405)
chr4 (1-38)||(25317957-25317994)
chr4 (1-38)||(26206868-26206905)
chr4 (12-41)||(40609769-40609798)
chr4 (1-37)||(624203-624239)
chr4 (6-38)||(6494535-6494567)
chr4 (1-37)||(13389342-13389378)
chr4 (1-37)||(31076196-31076232)
chr4 (1-41)||(42959415-42959455)
[»] chr3 (18 HSPs)
chr3 (1-47)||(54195483-54195529)
chr3 (1-46)||(36121964-36122009)
chr3 (1-41)||(10206861-10206901)
chr3 (1-41)||(39670985-39671025)
chr3 (1-41)||(44677372-44677412)
chr3 (1-43)||(37508384-37508426)
chr3 (1-41)||(33376008-33376048)
chr3 (1-41)||(35201428-35201468)
chr3 (1-44)||(22371334-22371377)
chr3 (3-38)||(28419105-28419140)
chr3 (1-44)||(51973253-51973296)
chr3 (1-43)||(26996458-26996500)
chr3 (12-41)||(11633767-11633796)
chr3 (1-38)||(32767819-32767856)
chr3 (1-41)||(43905116-43905156)
chr3 (1-37)||(49417717-49417753)
chr3 (1-41)||(54773641-54773681)
chr3 (1-37)||(55013145-55013181)
[»] chr1 (21 HSPs)
chr1 (1-43)||(20565004-20565046)
chr1 (1-41)||(26837595-26837635)
chr1 (1-44)||(3603254-3603297)
chr1 (1-43)||(26585765-26585807)
chr1 (1-42)||(51191931-51191972)
chr1 (1-41)||(7128261-7128301)
chr1 (1-41)||(8411606-8411646)
chr1 (1-41)||(9008368-9008408)
chr1 (1-41)||(21340664-21340704)
chr1 (1-37)||(36494594-36494630)
chr1 (3-42)||(29586978-29587017)
chr1 (1-44)||(37178847-37178890)
chr1 (1-35)||(756999-757033)
chr1 (14-44)||(21486218-21486248)
chr1 (1-38)||(33024462-33024499)
chr1 (1-38)||(38303579-38303616)
chr1 (1-41)||(1852839-1852879)
chr1 (1-41)||(4514342-4514382)
chr1 (16-44)||(21093243-21093271)
chr1 (1-49)||(47214350-47214398)
chr1 (1-37)||(51286260-51286296)
[»] chr7 (14 HSPs)
chr7 (1-42)||(23048287-23048328)
chr7 (1-41)||(32815311-32815351)
chr7 (1-49)||(47078132-47078180)
chr7 (1-44)||(29162861-29162904)
chr7 (1-42)||(39231615-39231656)
chr7 (1-41)||(37808652-37808692)
chr7 (1-44)||(41402651-41402694)
chr7 (12-42)||(34757357-34757387)
chr7 (1-38)||(13163062-13163099)
chr7 (12-41)||(41666810-41666839)
chr7 (1-41)||(19785967-19786007)
chr7 (1-41)||(26041208-26041248)
chr7 (1-37)||(29002749-29002785)
chr7 (1-41)||(41026188-41026228)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-41)||(150-190)
[»] chr6 (8 HSPs)
chr6 (1-41)||(3610849-3610889)
chr6 (1-41)||(5327479-5327519)
chr6 (1-40)||(14986633-14986672)
chr6 (1-38)||(34504163-34504200)
chr6 (1-37)||(2075343-2075379)
chr6 (1-37)||(22341067-22341103)
chr6 (1-41)||(11547417-11547457)
chr6 (1-37)||(30036686-30036722)
[»] chr5 (11 HSPs)
chr5 (1-41)||(35098893-35098933)
chr5 (1-43)||(21064112-21064154)
chr5 (1-38)||(8267711-8267748)
chr5 (1-41)||(4430824-4430864)
chr5 (1-41)||(16437452-16437492)
chr5 (1-37)||(17402814-17402850)
chr5 (1-43)||(33620751-33620793)
chr5 (1-42)||(39088756-39088797)
chr5 (1-37)||(2224934-2224970)
chr5 (1-41)||(2688874-2688914)
chr5 (1-37)||(42267488-42267524)
[»] scaffold0449 (1 HSPs)
scaffold0449 (1-43)||(9346-9388)


Alignment Details
Target: chr2 (Bit Score: 130; Significance: 2e-67; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 41569324 - 41569122
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcattcaattcaatatctactactcaatcatcgaataatcgtgtcaaagaagtaatcttaa 100  Q
    |||||||| | | |||||||||||||||||||| |||| ||      |||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  41569324 aataagttatcatcaaattggttgttcaaataatactcatc-----tttcaatatctactactcaatcat---ataatcgtgtcaaagaagtaatcttaa 41569233  T
Q  101 atcttttgctcatttgacaacactttgcatatggactcaataaatcattatcataaattacaacatatattattggctattgctgcactgcaataaacaa 200  Q
    |||||||||||||||||||||     |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41569232 atcttttgctcatttgacaac-----gcatatggactcaaaaaatcattatcataaactacaacatatattattggctattgctgcactgcaataaacaa 41569138  T
Q  201 aaaacttcatccttgt 216  Q
    ||||||||||||||||    
T  41569137 aaaacttcatccttgt 41569122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 670400 - 670360
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  670400 aataagttgtcatcaaattggttgttcaaataacactcctc 670360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17779525 - 17779565
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  17779525 aataagttgtcaccaaattggttgttcaaataacacccctc 17779565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28679459 - 28679495
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacact 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  28679459 aataagttgtgaccaaattggttgttcaaataacact 28679495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29051583 - 29051543
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||| | ||||||||||||||||||||||||||||||    
T  29051583 aataagttatcaccaaattggttgttcaaataacactcctc 29051543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31389690 - 31389730
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  31389690 aataagttgtcatcaaattggttgttcaaataacactcctc 31389730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18177083 - 18177120
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactc 38  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  18177083 aataagttgtcaccaaattgattgttcaaataacactc 18177120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 433993 - 434033
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| || |||||| ||||||||||||||||||||    
T  433993 aataagttgtcacaaaattgattgttcaaataacactcctc 434033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7552700 - 7552740
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    ||||| |||| ||||||||| ||||||||||||||||||||    
T  7552700 aataaattgtcaccaaattgattgttcaaataacactcctc 7552740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13971263 - 13971303
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13971263 aataagttgttaccaaattggttgttcaaataacactcctc 13971303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1633818 - 1633778
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  1633818 aataagttgtcaccaaattggttgttcaaataacactcctc 1633778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30135942 - 30135902
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  30135942 aataagttgtcaccaaattggttgttcaaataacactcctc 30135902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32843870 - 32843830
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  32843870 aataagttgtcaccaaattggttgttcaaataacactcctc 32843830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36110281 - 36110321
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  36110281 aataagttgtcaccaaattggttgttcaaataacactcctc 36110321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1871543 - 1871500
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcatt 44  Q
    |||||||||| | |||||||||||||||||||||||||||||||    
T  1871543 aataagttgtaatcaaattggttgttcaaataacactcctcatt 1871500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7955935 - 7955894
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctca 42  Q
    |||||||||| ||||||||| |||||||||||||||||||||    
T  7955935 aataagttgtcaccaaattgattgttcaaataacactcctca 7955894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 6968159 - 6968119
Alignment:
Q  3 taagttgttaccaaattggttgttcaaataacactcctcat 43  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  6968159 taagttgtcaccaaattgattgttcaaataacactcctcat 6968119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16966928 - 16966968
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||| | ||||||||||||||||||||||||||||||    
T  16966928 aataagttttcaccaaattggttgttcaaataacactcctc 16966968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34591407 - 34591447
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  34591407 aataagttgtcaccaaattgattgttcaaataacactcctc 34591447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7586091 - 7586048
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcatt 44  Q
    |||||||||| |  ||||||||||||||||||||||||||||||    
T  7586091 aataagttgtcatgaaattggttgttcaaataacactcctcatt 7586048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 37783899 - 37783860
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcct 40  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  37783899 aataagttgtcaccaaattggttgatcaaataacactcct 37783860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 41
Target Start/End: Original strand, 9208219 - 9208248
Alignment:
Q  12 accaaattggttgttcaaataacactcctc 41  Q
    ||||||||||||||||||||||||||||||    
T  9208219 accaaattggttgttcaaataacactcctc 9208248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 29867228 - 29867191
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactc 38  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  29867228 aataagttgttaccaaattagttgttcatataacactc 29867191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 43
Target Start/End: Original strand, 5864350 - 5864378
Alignment:
Q  15 aaattggttgttcaaataacactcctcat 43  Q
    |||||||||||||||||||||||||||||    
T  5864350 aaattggttgttcaaataacactcctcat 5864378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11017948 - 11017988
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||  ||||||||||||||||||||    
T  11017948 aataagttgtcaccaaattaattgttcaaataacactcctc 11017988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 18651503 - 18651539
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacact 37  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  18651503 aataagttgttactaaattggttgtttaaataacact 18651539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32847614 - 32847574
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||| | ||||||||| ||||||||||||||||||||    
T  32847614 aataagttatcaccaaattgattgttcaaataacactcctc 32847574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33589159 - 33589119
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||| |||||||||||||| |||||    
T  33589159 aataagttgtcaccaaattgattgttcaaataacaatcctc 33589119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14451536 - 14451579
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcatt 44  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  14451536 aataagttgtcaccaaattggttgttcaaataacactcctcatt 14451579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 53152249 - 53152207
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcat 43  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  53152249 aataagttgtcaccaaattggttgttcaaataacactcctcat 53152207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5932086 - 5932046
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  5932086 aataagttgtcaccaaattggttgttcaaataacactcctc 5932046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9118792 - 9118752
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  9118792 aataagttgtcaccaaattggttgttcaaataacactcctc 9118752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37066130 - 37066170
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  37066130 aataagttgtcaccaaattggttgttcaaataacactcctc 37066170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41486071 - 41486031
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  41486071 aataagttgtcaccaaattggttgttcaaataacactcctc 41486031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47965880 - 47965920
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  47965880 aataagttgtcaccaaattggttgttcaaataacactcctc 47965920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17476019 - 17476062
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcatt 44  Q
    |||||||||| ||||||||| |||||||||||||||||||||||    
T  17476019 aataagttgtcaccaaattgattgttcaaataacactcctcatt 17476062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30079989 - 30080030
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctca 42  Q
    |||||||| | |||||||||||||||||||||||||||||||    
T  30079989 aataagttttcaccaaattggttgttcaaataacactcctca 30080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33899254 - 33899213
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctca 42  Q
    |||||||||| |||||||||||||||||||||||||| ||||    
T  33899254 aataagttgtcaccaaattggttgttcaaataacacttctca 33899213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 50273001 - 50272960
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctca 42  Q
    |||||||||| |||||||||||||||||||||| ||||||||    
T  50273001 aataagttgtcaccaaattggttgttcaaataatactcctca 50272960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2256259 - 2256219
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  2256259 aataagttgtcaccaaattagttgttcaaataacactcctc 2256219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12112770 - 12112810
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  12112770 aataagttgtcaccaaattggttgttcaaatatcactcctc 12112810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23822176 - 23822136
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  23822176 aataagttgtcaccaaattggttgttcaaataacacccctc 23822136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 51194412 - 51194452
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  51194412 aataagttgtcatcaaattggttgttcaaataacactcctc 51194452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 54669512 - 54669472
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  54669512 aataagttgtcatcaaattggttgttcaaataacactcctc 54669472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21260441 - 21260483
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcat 43  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||    
T  21260441 aataaattgtcaccaaattggttgttcaaaaaacactcctcat 21260483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 51746363 - 51746405
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcat 43  Q
    |||||||||| ||||||||  ||||||||||||||||||||||    
T  51746363 aataagttgtcaccaaattaattgttcaaataacactcctcat 51746405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25317994 - 25317957
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactc 38  Q
    |||||||| | |||||||||||||||||||||||||||    
T  25317994 aataagttatcaccaaattggttgttcaaataacactc 25317957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 26206905 - 26206868
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactc 38  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  26206905 aataagttgtcaccaaattagttgttcaaataacactc 26206868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 41
Target Start/End: Original strand, 40609769 - 40609798
Alignment:
Q  12 accaaattggttgttcaaataacactcctc 41  Q
    ||||||||||||||||||||||||||||||    
T  40609769 accaaattggttgttcaaataacactcctc 40609798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 624239 - 624203
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacact 37  Q
    |||||||||| |||||||| |||||||||||||||||    
T  624239 aataagttgtcaccaaattagttgttcaaataacact 624203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 6494567 - 6494535
Alignment:
Q  6 gttgttaccaaattggttgttcaaataacactc 38  Q
    ||||| |||||||||||||||||||||||||||    
T  6494567 gttgtcaccaaattggttgttcaaataacactc 6494535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 13389378 - 13389342
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacact 37  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  13389378 aataagttgtgaccaaattgattgttcaaataacact 13389342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 31076196 - 31076232
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacact 37  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  31076196 aataagttgtcaccaaattggttgtttaaataacact 31076232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42959415 - 42959455
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||| | || |||||||||||||||||||||||||||    
T  42959415 aataagttatcactaaattggttgttcaaataacactcctc 42959455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 54195483 - 54195529
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcattcaa 47  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||    
T  54195483 aataagttgtcaccaaattggttgttcaaataacactcctcaatcaa 54195529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36121964 - 36122009
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcattca 46  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||    
T  36121964 aataagttgtcaccaaattggttgttcaaataacactcctctttca 36122009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10206901 - 10206861
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  10206901 aataagttgtcaccaaattggttgttcaaataacactcctc 10206861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39671025 - 39670985
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  39671025 aataagttgtcaccaaattggttgttcaaataacactcctc 39670985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44677412 - 44677372
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  44677412 aataagttgtcaccaaattggttgttcaaataacactcctc 44677372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37508426 - 37508384
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcat 43  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  37508426 aataagttgtcatcaaattggttgttcaaataacactcctcat 37508384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33376008 - 33376048
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  33376008 aataagttgtcaccaaattgattgttcaaataacactcctc 33376048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35201468 - 35201428
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  35201468 aataagttgtcaccaaattgattgttcaaataacactcctc 35201428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22371334 - 22371377
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcatt 44  Q
    ||||| |||| |||||||| ||||||||||||||||||||||||    
T  22371334 aataaattgtcaccaaattagttgttcaaataacactcctcatt 22371377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 28419140 - 28419105
Alignment:
Q  3 taagttgttaccaaattggttgttcaaataacactc 38  Q
    |||||||| |||||||||||||||||||||||||||    
T  28419140 taagttgtcaccaaattggttgttcaaataacactc 28419105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 51973296 - 51973253
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcatt 44  Q
    ||||| |||| |||||||| ||||||||||||||||||||||||    
T  51973296 aataaattgtcaccaaattagttgttcaaataacactcctcatt 51973253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26996458 - 26996500
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcat 43  Q
    ||||| |||| |||||||| |||||||||||||||||||||||    
T  26996458 aataaattgtcaccaaatttgttgttcaaataacactcctcat 26996500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 41
Target Start/End: Original strand, 11633767 - 11633796
Alignment:
Q  12 accaaattggttgttcaaataacactcctc 41  Q
    ||||||||||||||||||||||||||||||    
T  11633767 accaaattggttgttcaaataacactcctc 11633796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32767819 - 32767856
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactc 38  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  32767819 aataagttgtcaccaaattgattgttcaaataacactc 32767856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 43905116 - 43905156
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||| | || |||||||||||||||||||||||||||    
T  43905116 aataagttttcactaaattggttgttcaaataacactcctc 43905156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 49417717 - 49417753
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacact 37  Q
    |||||||||| || |||||||||||||||||||||||    
T  49417717 aataagttgtcacaaaattggttgttcaaataacact 49417753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 54773681 - 54773641
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| |||||||||||| |||| ||||||||||||    
T  54773681 aataagttgtcaccaaattggttattcatataacactcctc 54773641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 55013145 - 55013181
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacact 37  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  55013145 aataaattgtcaccaaattggttgttcaaataacact 55013181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20565046 - 20565004
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcat 43  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  20565046 aataagttgtcaccaaattggttgttcaaataacactcctcat 20565004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26837595 - 26837635
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  26837595 aataagttgtcaccaaattggttgttcaaataacactcctc 26837635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3603254 - 3603297
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcatt 44  Q
    |||||||||| | |||||||||||||||||||||||||||||||    
T  3603254 aataagttgtcatcaaattggttgttcaaataacactcctcatt 3603297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26585807 - 26585765
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcat 43  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  26585807 aataagttgtcatcaaattggttgttcaaataacactcctcat 26585765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 51191931 - 51191972
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctca 42  Q
    |||||||||| ||||||||||||||||||||||||| |||||    
T  51191931 aataagttgtcaccaaattggttgttcaaataacacccctca 51191972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7128261 - 7128301
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  7128261 aataagttgtcaccaaattgattgttcaaataacactcctc 7128301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8411646 - 8411606
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  8411646 aataagttgtcaccaaattggttgttcaaataacacacctc 8411606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9008368 - 9008408
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  9008368 aataagttgtcaccaaattgattgttcaaataacactcctc 9008408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21340664 - 21340704
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  21340664 aataagttgtcaccaaattgattgttcaaataacactcctc 21340704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 36494594 - 36494630
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacact 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  36494594 aataagttgtcaccaaattggttgttcaaataacact 36494630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 29586978 - 29587017
Alignment:
Q  3 taagttgttaccaaattggttgttcaaataacactcctca 42  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  29586978 taagttgtcaccaaattggttgttcaaatagcactcctca 29587017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37178847 - 37178890
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcatt 44  Q
    |||||||||| ||||||||| |||||||||||| ||||||||||    
T  37178847 aataagttgtcaccaaattgattgttcaaataaaactcctcatt 37178890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 756999 - 757033
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataaca 35  Q
    |||||||||| ||||||||||||||||||||||||    
T  756999 aataagttgtcaccaaattggttgttcaaataaca 757033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 21486248 - 21486218
Alignment:
Q  14 caaattggttgttcaaataacactcctcatt 44  Q
    |||||||||||||||||||||||||||||||    
T  21486248 caaattggttgttcaaataacactcctcatt 21486218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 33024499 - 33024462
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactc 38  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  33024499 aataagttgtcaccaaattgattgttcaaataacactc 33024462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38303616 - 38303579
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactc 38  Q
    |||||||| | |||||||||||||||||||||||||||    
T  38303616 aataagttatcaccaaattggttgttcaaataacactc 38303579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1852879 - 1852839
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| | |||||||||| |||||||||||||||||    
T  1852879 aataagttgtcatcaaattggttattcaaataacactcctc 1852839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4514382 - 4514342
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| || |||||| ||||||||||||||||||||    
T  4514382 aataagttgtcactaaattgattgttcaaataacactcctc 4514342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 44
Target Start/End: Complemental strand, 21093271 - 21093243
Alignment:
Q  16 aattggttgttcaaataacactcctcatt 44  Q
    |||||||||||||||||||||||||||||    
T  21093271 aattggttgttcaaataacactcctcatt 21093243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 47214350 - 47214398
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcattcaatt 49  Q
    |||||||||| || ||||||||||||||||||||||  ||| |||||||    
T  47214350 aataagttgtcacaaaattggttgttcaaataacaccactctttcaatt 47214398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 51286296 - 51286260
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacact 37  Q
    |||||||||| || |||||||||||||||||||||||    
T  51286296 aataagttgtcacaaaattggttgttcaaataacact 51286260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23048328 - 23048287
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctca 42  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  23048328 aataagttgtcaccaaattggttgttcaaataacactcctca 23048287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32815311 - 32815351
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  32815311 aataagttgtcaccaaattggttgttcaaataacactcctc 32815351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 47078180 - 47078132
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcattcaatt 49  Q
    ||||||||||||| ||||||||||||||||||||||| ||| |||||||    
T  47078180 aataagttgttacaaaattggttgttcaaataacactactctttcaatt 47078132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29162904 - 29162861
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcatt 44  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  29162904 aataagttgtcaccaaattggttgttcaaataacactcatcatt 29162861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39231656 - 39231615
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctca 42  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  39231656 aataagttgtcaccaaattagttgttcaaataacactcctca 39231615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37808692 - 37808652
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||| ||||| ||||||||||||||||||||||||||||||    
T  37808692 aatacgttgtcaccaaattggttgttcaaataacactcctc 37808652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 41402651 - 41402694
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcatt 44  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||    
T  41402651 aataagttgtcaccaaattagttgttcaaataacacttctcatt 41402694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 42
Target Start/End: Complemental strand, 34757387 - 34757357
Alignment:
Q  12 accaaattggttgttcaaataacactcctca 42  Q
    |||||||||||||||||||||||||||||||    
T  34757387 accaaattggttgttcaaataacactcctca 34757357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 13163062 - 13163099
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactc 38  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  13163062 aataagttgtcaccaaattgattgttcaaataacactc 13163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 41
Target Start/End: Complemental strand, 41666839 - 41666810
Alignment:
Q  12 accaaattggttgttcaaataacactcctc 41  Q
    ||||||||||||||||||||||||||||||    
T  41666839 accaaattggttgttcaaataacactcctc 41666810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19786007 - 19785967
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| | ||||||| ||||||||||||||||||||    
T  19786007 aataagttgtcatcaaattgattgttcaaataacactcctc 19785967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26041248 - 26041208
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||| |||||||||||| |||||||    
T  26041248 aataagttgtcaccaaattgattgttcaaataatactcctc 26041208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29002749 - 29002785
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacact 37  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  29002749 aataagctgtcaccaaattggttgttcaaataacact 29002785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41026188 - 41026228
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    ||||| |||| |||||||| |||||||||||||||||||||    
T  41026188 aataaattgtcaccaaattagttgttcaaataacactcctc 41026228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 150 - 190
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  150 aataagttgtcaccaaattggttgttcaaataacactcctc 190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3610889 - 3610849
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  3610889 aataagttgtcaccaaattggttgttcaaataacactcctc 3610849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5327519 - 5327479
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  5327519 aataagttgtcaccaaattggttgttcaaataacactcctc 5327479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 14986672 - 14986633
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcct 40  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  14986672 aataagttgtcaccaaattggttgttcaaataacactcct 14986633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34504163 - 34504200
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactc 38  Q
    |||||||||| |||||||||||||||||||||||||||    
T  34504163 aataagttgtcaccaaattggttgttcaaataacactc 34504200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2075379 - 2075343
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacact 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  2075379 aataagttgtcaccaaattggttgttcaaataacact 2075343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 22341103 - 22341067
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacact 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  22341103 aataagttgtcaccaaattggttgttcaaataacact 22341067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11547457 - 11547417
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    ||||| |||| ||||||||| ||||||||||||||||||||    
T  11547457 aataaattgtcaccaaattgattgttcaaataacactcctc 11547417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30036722 - 30036686
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacact 37  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  30036722 aataagttgtcaccaaattgattgttcaaataacact 30036686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35098933 - 35098893
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  35098933 aataagttgtcaccaaattggttgttcaaataacactcctc 35098893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21064154 - 21064112
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcat 43  Q
    |||||||||| ||||||||| ||||||||||||||||||||||    
T  21064154 aataagttgtcaccaaattgattgttcaaataacactcctcat 21064112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8267748 - 8267711
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactc 38  Q
    |||||||||| |||||||||||||||||||||||||||    
T  8267748 aataagttgtcaccaaattggttgttcaaataacactc 8267711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4430864 - 4430824
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  4430864 aataagttgtcaccaaattggttgttcaaatagcactcctc 4430824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16437492 - 16437452
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    ||||| |||| ||||||||||||||||||||||||||||||    
T  16437492 aataaattgtcaccaaattggttgttcaaataacactcctc 16437452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 17402850 - 17402814
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacact 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  17402850 aataagttgtcaccaaattggttgttcaaataacact 17402814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33620751 - 33620793
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcat 43  Q
    |||||||||| || ||||||||||||||||||||| |||||||    
T  33620751 aataagttgtcactaaattggttgttcaaataacattcctcat 33620793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39088797 - 39088756
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctca 42  Q
    |||||||||| || ||||||||||||||||||||||| ||||    
T  39088797 aataagttgtcactaaattggttgttcaaataacactactca 39088756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 2224934 - 2224970
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacact 37  Q
    |||||||||| | ||||||||||||||||||||||||    
T  2224934 aataagttgtcatcaaattggttgttcaaataacact 2224970  T

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Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2688914 - 2688874
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctc 41  Q
    ||||| |||| |||||||||||||||||||||||| |||||    
T  2688914 aataatttgtcaccaaattggttgttcaaataacaatcctc 2688874  T

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Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 42267488 - 42267524
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacact 37  Q
    |||||||||| | ||||||||||||||||||||||||    
T  42267488 aataagttgtcatcaaattggttgttcaaataacact 42267524  T

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Target: scaffold0449 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9346 - 9388
Alignment:
Q  1 aataagttgttaccaaattggttgttcaaataacactcctcat 43  Q
    |||||||||| | ||||||||||||||||||||||||| ||||    
T  9346 aataagttgtgatcaaattggttgttcaaataacactcttcat 9388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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