View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9612_low_13 (Length: 502)
Name: NF9612_low_13
Description: NF9612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9612_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 426; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 8 - 487
Target Start/End: Complemental strand, 36884936 - 36884457
Alignment:
| Q |
8 |
aagcataggtaatttatacagagaagcatatggatagtgaggcactctataatctgtttttgtcatttttgctgagaagaccttgataaaatcttgaaaa |
107 |
Q |
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| T |
36884936 |
aagcataggtaatttatacagagaagcatatggatagtaaggcactctataatctgtttttgtcatttttgctgagaagaccttgataaaatcttgaaaa |
36884837 |
T |
|
| Q |
108 |
ataatacgaatttgagattgtattggaaattcacnnnnnnngtgtaataatcaactagctacctcactgagttaggatgccattaatatttctgtgaatt |
207 |
Q |
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| T |
36884836 |
ataatacgaatttgagattgtatttgaaattcactttttttgtgtaataatcaactagctacctcactgagttaggatgccattaatatttctgtgaatt |
36884737 |
T |
|
| Q |
208 |
catttctaatgctaatcatgctctcnnnnnnncttcctattggtgatagaggtctcttctgctgaactagacgacatgccactactcccacctgttaatg |
307 |
Q |
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|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36884736 |
catttctaatgctaatcatgctatctttttttcttcctattggtgatagaggtctcttctgctgaactagacgacatgccactactcccacctgttaatg |
36884637 |
T |
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| Q |
308 |
ttgcatctcttttgggtccaatgagatttcctttcgtgcgccatagcaatgtggaggaaacatcaagaagaagtttttccaaaagaggcagatccactgg |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36884636 |
ttgcatctcttttgggtccaatgagatttcctttcgtgcgccatagcaatgtggaggaaacatcaagaagaagtttttccaaaagaggcagatccactgg |
36884537 |
T |
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| Q |
408 |
aaggacgaaaatttataccatagcagagcttcagctggctactaacttctttaatgaaggcaaccttctgggagagggat |
487 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36884536 |
aaggacgaaaatttataccatagcagagcttcagctggctactaacttctttaatgaaggcaaccttctgggagagggat |
36884457 |
T |
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