View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9612_low_16 (Length: 491)

Name: NF9612_low_16
Description: NF9612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9612_low_16
NF9612_low_16
[»] chr1 (49 HSPs)
chr1 (1-316)||(47541309-47541620)
chr1 (143-316)||(47540023-47540194)
chr1 (373-473)||(47541152-47541252)
chr1 (125-312)||(47547499-47547687)
chr1 (374-473)||(47539863-47539963)
chr1 (1-107)||(5683161-5683263)
chr1 (23-109)||(5683571-5683653)
chr1 (1-109)||(9880482-9880586)
chr1 (14-66)||(1500982-1501034)
chr1 (1-107)||(4288428-4288525)
chr1 (1-66)||(5172782-5172847)
chr1 (1-109)||(19895398-19895502)
chr1 (1-109)||(18180266-18180370)
chr1 (12-66)||(3591336-3591390)
chr1 (1-63)||(50359165-50359227)
chr1 (1-66)||(19895788-19895853)
chr1 (14-66)||(45664724-45664776)
chr1 (14-61)||(8997382-8997429)
chr1 (14-61)||(32266524-32266571)
chr1 (14-61)||(40124117-40124164)
chr1 (14-61)||(47410464-47410511)
chr1 (14-61)||(47410855-47410902)
chr1 (1-67)||(6751341-6751407)
chr1 (1-67)||(18179915-18179981)
chr1 (14-109)||(36793575-36793666)
chr1 (12-107)||(48154974-48155064)
chr1 (12-66)||(50359438-50359492)
chr1 (22-67)||(12869663-12869708)
chr1 (22-62)||(1500100-1500140)
chr1 (12-68)||(19976199-19976255)
chr1 (1-114)||(31436371-31436480)
chr1 (14-61)||(9122726-9122773)
chr1 (14-61)||(9123117-9123164)
chr1 (14-61)||(17968078-17968125)
chr1 (14-61)||(32266915-32266962)
chr1 (14-61)||(40124508-40124555)
chr1 (14-61)||(46802363-46802410)
chr1 (12-67)||(48155278-48155333)
chr1 (22-67)||(3591173-3591218)
chr1 (1-78)||(6751072-6751149)
chr1 (14-59)||(46802754-46802799)
chr1 (15-67)||(12868469-12868521)
chr1 (14-57)||(30427719-30427762)
chr1 (14-61)||(30428106-30428153)
chr1 (14-57)||(45230175-45230218)
chr1 (22-61)||(45230570-45230609)
chr1 (12-66)||(9880789-9880843)
chr1 (4-42)||(42723246-42723284)
chr1 (14-50)||(17968469-17968505)
[»] chr5 (49 HSPs)
chr5 (1-106)||(87249-87350)
chr5 (1-67)||(31588334-31588400)
chr5 (1-66)||(18999628-18999693)
chr5 (3-67)||(3935684-3935748)
chr5 (1-106)||(8750348-8750449)
chr5 (24-109)||(31176505-31176586)
chr5 (12-67)||(18339109-18339164)
chr5 (1-66)||(18999403-18999468)
chr5 (5-62)||(21949823-21949880)
chr5 (14-61)||(5747193-5747240)
chr5 (14-61)||(6543456-6543503)
chr5 (14-61)||(21949441-21949488)
chr5 (14-61)||(28641593-28641640)
chr5 (14-61)||(31162462-31162509)
chr5 (14-61)||(39402253-39402300)
chr5 (1-59)||(14626077-14626135)
chr5 (14-109)||(19353070-19353161)
chr5 (1-63)||(30415472-30415533)
chr5 (14-67)||(4186790-4186843)
chr5 (1-111)||(8750006-8750112)
chr5 (14-67)||(19352507-19352560)
chr5 (23-109)||(22231170-22231252)
chr5 (15-67)||(119220-119272)
chr5 (15-67)||(119786-119838)
chr5 (14-61)||(3191839-3191886)
chr5 (14-61)||(3192232-3192279)
chr5 (14-61)||(6543847-6543894)
chr5 (24-67)||(18340661-18340704)
chr5 (14-61)||(28641202-28641249)
chr5 (15-58)||(38834780-38834823)
chr5 (1-63)||(8648053-8648115)
chr5 (15-64)||(87058-87107)
chr5 (14-59)||(119054-119099)
chr5 (26-107)||(15978389-15978467)
chr5 (1-66)||(16284311-16284376)
chr5 (14-67)||(30351705-30351758)
chr5 (14-59)||(31093428-31093473)
chr5 (25-66)||(37813412-37813453)
chr5 (14-61)||(5746802-5746849)
chr5 (14-61)||(31162853-31162900)
chr5 (12-51)||(35383292-35383331)
chr5 (14-61)||(39402646-39402693)
chr5 (14-68)||(119959-120013)
chr5 (12-66)||(20892544-20892598)
chr5 (22-59)||(3406694-3406731)
chr5 (14-59)||(4187837-4187882)
chr5 (22-66)||(718233-718277)
chr5 (23-63)||(3406499-3406539)
chr5 (3-66)||(13987319-13987383)
[»] chr2 (52 HSPs)
chr2 (1-111)||(2517409-2517515)
chr2 (1-108)||(3691377-3691480)
chr2 (1-67)||(21267356-21267422)
chr2 (12-69)||(21216957-21217014)
chr2 (12-110)||(21217320-21217414)
chr2 (12-69)||(21265388-21265445)
chr2 (12-67)||(21265027-21265082)
chr2 (1-67)||(2191253-2191319)
chr2 (1-67)||(24093192-24093258)
chr2 (12-109)||(7083520-7083613)
chr2 (12-66)||(3691120-3691174)
chr2 (5-61)||(6476510-6476566)
chr2 (14-66)||(10709512-10709564)
chr2 (14-61)||(1804273-1804320)
chr2 (14-61)||(1804664-1804711)
chr2 (14-61)||(6476128-6476175)
chr2 (14-61)||(11451188-11451235)
chr2 (12-67)||(21182343-21182398)
chr2 (14-61)||(27377690-27377737)
chr2 (12-67)||(32114201-32114256)
chr2 (2-114)||(39729595-39729703)
chr2 (25-67)||(3624925-3624967)
chr2 (14-67)||(23221870-23221923)
chr2 (1-66)||(24093544-24093609)
chr2 (14-61)||(3854499-3854546)
chr2 (1-67)||(10706639-10706703)
chr2 (14-61)||(12090127-12090174)
chr2 (14-61)||(34037850-34037897)
chr2 (12-62)||(2035649-2035699)
chr2 (12-62)||(2036602-2036652)
chr2 (14-67)||(39947087-39947140)
chr2 (14-59)||(44934684-44934729)
chr2 (14-66)||(18105753-18105805)
chr2 (23-67)||(39945878-39945922)
chr2 (14-57)||(3854112-3854155)
chr2 (14-61)||(11450797-11450844)
chr2 (14-57)||(22701558-22701601)
chr2 (14-61)||(27378081-27378128)
chr2 (12-67)||(32860850-32860905)
chr2 (14-61)||(39096565-39096612)
chr2 (14-61)||(39096958-39097005)
chr2 (4-59)||(44930027-44930082)
chr2 (12-62)||(32114470-32114520)
chr2 (14-59)||(10708067-10708112)
chr2 (14-67)||(10710831-10710884)
chr2 (14-59)||(23222864-23222909)
chr2 (22-67)||(24093365-24093410)
chr2 (22-59)||(26525904-26525941)
chr2 (22-67)||(32861049-32861094)
chr2 (33-111)||(39600768-39600842)
chr2 (12-52)||(2606655-2606695)
chr2 (14-50)||(12089747-12089783)
[»] chr4 (63 HSPs)
chr4 (1-114)||(29691518-29691627)
chr4 (1-111)||(30608621-30608727)
chr4 (1-67)||(3296579-3296645)
chr4 (1-67)||(51906807-51906873)
chr4 (1-111)||(51906416-51906522)
chr4 (1-67)||(3296932-3296998)
chr4 (12-66)||(34129299-34129353)
chr4 (1-66)||(30608282-30608347)
chr4 (1-69)||(38759738-38759806)
chr4 (1-89)||(48553910-48553998)
chr4 (13-67)||(17288373-17288427)
chr4 (4-62)||(40841884-40841942)
chr4 (12-69)||(26984178-26984235)
chr4 (12-69)||(30953000-30953057)
chr4 (12-109)||(7118163-7118256)
chr4 (14-62)||(40841502-40841550)
chr4 (14-62)||(55347970-55348018)
chr4 (14-61)||(2669048-2669095)
chr4 (14-61)||(2669439-2669486)
chr4 (14-61)||(12108290-12108337)
chr4 (14-61)||(12922683-12922730)
chr4 (14-61)||(28957743-28957790)
chr4 (14-61)||(38026108-38026155)
chr4 (23-69)||(1791182-1791228)
chr4 (1-67)||(34129030-34129096)
chr4 (14-67)||(54142361-54142414)
chr4 (14-67)||(54143502-54143555)
chr4 (3-67)||(56106451-56106515)
chr4 (14-61)||(28505250-28505297)
chr4 (14-61)||(28957352-28957399)
chr4 (14-61)||(31227920-31227967)
chr4 (14-61)||(31228311-31228358)
chr4 (1-48)||(35166854-35166901)
chr4 (12-67)||(41510104-41510159)
chr4 (14-61)||(43979990-43980037)
chr4 (12-71)||(48760114-48760173)
chr4 (14-61)||(55347602-55347649)
chr4 (12-66)||(5544821-5544875)
chr4 (25-71)||(25917050-25917096)
chr4 (24-66)||(34294488-34294529)
chr4 (14-109)||(54168824-54168915)
chr4 (22-67)||(10580076-10580121)
chr4 (14-59)||(21235071-21235116)
chr4 (14-59)||(21235462-21235507)
chr4 (1-67)||(26168380-26168448)
chr4 (14-59)||(47053805-47053850)
chr4 (3-67)||(30048006-30048070)
chr4 (3-67)||(30062347-30062411)
chr4 (14-62)||(54167535-54167583)
chr4 (14-57)||(1317106-1317149)
chr4 (14-57)||(12923074-12923117)
chr4 (14-57)||(30545759-30545802)
chr4 (14-57)||(43979603-43979646)
chr4 (14-57)||(46263067-46263110)
chr4 (4-59)||(47058498-47058553)
chr4 (13-67)||(49424490-49424544)
chr4 (1-67)||(52398716-52398782)
chr4 (14-59)||(789938-789983)
chr4 (1-62)||(26168034-26168094)
chr4 (15-59)||(1317494-1317538)
chr4 (27-67)||(1791389-1791429)
chr4 (27-67)||(3296753-3296793)
chr4 (27-67)||(35166708-35166748)
[»] chr6 (31 HSPs)
chr6 (3-110)||(5974008-5974111)
chr6 (3-110)||(8710331-8710433)
chr6 (23-111)||(4510184-4510268)
chr6 (12-78)||(17157571-17157637)
chr6 (14-67)||(211477-211530)
chr6 (13-66)||(20522156-20522209)
chr6 (12-65)||(21113067-21113120)
chr6 (14-61)||(14257188-14257235)
chr6 (14-61)||(14257579-14257626)
chr6 (14-61)||(20824205-20824252)
chr6 (1-51)||(1869503-1869553)
chr6 (1-67)||(7645970-7646036)
chr6 (12-66)||(211719-211774)
chr6 (14-61)||(6162689-6162736)
chr6 (14-61)||(15147759-15147806)
chr6 (14-61)||(20824596-20824643)
chr6 (14-61)||(33107362-33107409)
chr6 (12-62)||(19595648-19595698)
chr6 (23-61)||(34984554-34984592)
chr6 (22-67)||(14712866-14712911)
chr6 (14-59)||(15148150-15148195)
chr6 (14-61)||(6162286-6162333)
chr6 (31-66)||(14713024-14713059)
chr6 (36-67)||(17157856-17157887)
chr6 (14-61)||(20228236-20228283)
chr6 (14-61)||(22122220-22122267)
chr6 (14-57)||(33106975-33107018)
chr6 (3-89)||(14712672-14712757)
chr6 (12-62)||(19579201-19579251)
chr6 (24-69)||(5975866-5975910)
chr6 (22-63)||(20521225-20521266)
[»] chr3 (50 HSPs)
chr3 (1-110)||(22814293-22814398)
chr3 (2-68)||(51755903-51755969)
chr3 (1-111)||(25770317-25770423)
chr3 (1-66)||(43933477-43933542)
chr3 (3-67)||(9217856-9217920)
chr3 (1-67)||(9218501-9218567)
chr3 (1-67)||(44504374-44504440)
chr3 (1-66)||(44504129-44504194)
chr3 (1-67)||(13637768-13637834)
chr3 (1-67)||(51471371-51471437)
chr3 (16-67)||(132062-132113)
chr3 (4-62)||(45539249-45539307)
chr3 (13-67)||(48868587-48868641)
chr3 (10-59)||(33225532-33225581)
chr3 (1-62)||(37172122-37172183)
chr3 (12-114)||(37172475-37172573)
chr3 (14-62)||(45539641-45539689)
chr3 (14-61)||(36899295-36899342)
chr3 (14-61)||(42606321-42606368)
chr3 (14-61)||(46689723-46689770)
chr3 (29-116)||(22814597-22814680)
chr3 (1-67)||(34743458-34743524)
chr3 (23-89)||(38485711-38485777)
chr3 (1-67)||(50732261-50732327)
chr3 (1-67)||(50780528-50780594)
chr3 (13-67)||(54588493-54588547)
chr3 (31-109)||(45728335-45728409)
chr3 (14-61)||(2388673-2388720)
chr3 (14-61)||(2389064-2389111)
chr3 (22-61)||(4199895-4199934)
chr3 (4-59)||(20831092-20831147)
chr3 (1-64)||(27013448-27013511)
chr3 (14-61)||(34949797-34949844)
chr3 (22-61)||(36899694-36899733)
chr3 (14-61)||(42606712-42606759)
chr3 (14-61)||(46690114-46690161)
chr3 (14-59)||(20826772-20826817)
chr3 (14-59)||(22407275-22407320)
chr3 (25-66)||(25770728-25770769)
chr3 (17-61)||(27475431-27475475)
chr3 (14-61)||(4199494-4199541)
chr3 (14-57)||(22406888-22406931)
chr3 (14-57)||(34950188-34950231)
chr3 (13-59)||(3799766-3799812)
chr3 (12-66)||(43933727-43933780)
chr3 (13-59)||(47343725-47343771)
chr3 (13-59)||(48867694-48867740)
chr3 (10-59)||(33226919-33226968)
chr3 (14-59)||(35300788-35300833)
chr3 (22-66)||(25770531-25770575)
[»] chr7 (44 HSPs)
chr7 (12-112)||(17075214-17075310)
chr7 (12-69)||(17075616-17075673)
chr7 (1-108)||(20543910-20544013)
chr7 (1-67)||(22948866-22948932)
chr7 (1-108)||(32092227-32092330)
chr7 (3-67)||(42750108-42750172)
chr7 (1-67)||(11974700-11974766)
chr7 (1-66)||(20544299-20544363)
chr7 (12-109)||(6621115-6621207)
chr7 (12-71)||(5029753-5029811)
chr7 (14-69)||(27311049-27311104)
chr7 (12-108)||(28852692-28852784)
chr7 (1-68)||(44803620-44803687)
chr7 (1-67)||(18152792-18152858)
chr7 (1-55)||(32092517-32092571)
chr7 (12-78)||(49053880-49053946)
chr7 (14-63)||(27310087-27310136)
chr7 (14-63)||(30939565-30939614)
chr7 (1-56)||(28838399-28838454)
chr7 (12-108)||(28854676-28854768)
chr7 (12-111)||(10466778-10466873)
chr7 (4-62)||(33848288-33848346)
chr7 (14-61)||(1244444-1244491)
chr7 (14-61)||(18443217-18443264)
chr7 (22-61)||(18443618-18443657)
chr7 (14-61)||(22954087-22954134)
chr7 (14-61)||(28898070-28898117)
chr7 (14-61)||(33847907-33847954)
chr7 (14-61)||(41298677-41298724)
chr7 (1-67)||(11975051-11975117)
chr7 (14-67)||(16755634-16755687)
chr7 (14-62)||(4152761-4152809)
chr7 (10-111)||(12933058-12933155)
chr7 (14-57)||(884728-884771)
chr7 (14-57)||(1244057-1244100)
chr7 (12-59)||(12908425-12908472)
chr7 (14-57)||(28898461-28898504)
chr7 (14-61)||(29783976-29784023)
chr7 (14-69)||(30938629-30938684)
chr7 (14-57)||(41298290-41298333)
chr7 (23-68)||(11992749-11992794)
chr7 (38-108)||(23548053-23548119)
chr7 (1-66)||(23548995-23549060)
chr7 (23-67)||(10466651-10466695)
[»] chr8 (38 HSPs)
chr8 (12-119)||(17914185-17914288)
chr8 (1-67)||(6297850-6297916)
chr8 (1-67)||(6298023-6298089)
chr8 (12-67)||(16662204-16662259)
chr8 (1-67)||(9800331-9800397)
chr8 (1-67)||(21006110-21006176)
chr8 (14-67)||(6297498-6297551)
chr8 (1-66)||(12489265-12489330)
chr8 (14-67)||(26720357-26720410)
chr8 (1-114)||(26997857-26997966)
chr8 (12-67)||(26243394-26243449)
chr8 (1-108)||(9800038-9800141)
chr8 (12-62)||(13315243-13315293)
chr8 (1-66)||(10047516-10047580)
chr8 (14-61)||(29917146-29917193)
chr8 (14-67)||(4624569-4624622)
chr8 (25-66)||(16662483-16662524)
chr8 (1-89)||(7344844-7344932)
chr8 (14-66)||(44148614-44148666)
chr8 (14-61)||(29917539-29917586)
chr8 (12-66)||(44024262-44024316)
chr8 (1-59)||(44803551-44803609)
chr8 (22-67)||(21005958-21006003)
chr8 (14-67)||(36155307-36155360)
chr8 (15-59)||(4694434-4694478)
chr8 (12-64)||(12489526-12489577)
chr8 (14-61)||(12734214-12734261)
chr8 (12-67)||(17915506-17915560)
chr8 (24-67)||(20682744-20682787)
chr8 (24-78)||(11089133-11089187)
chr8 (13-109)||(36156358-36156451)
chr8 (10-59)||(40304728-40304777)
chr8 (22-67)||(44024434-44024479)
chr8 (14-50)||(4624413-4624449)
chr8 (14-50)||(12734605-12734641)
chr8 (14-62)||(20682925-20682973)
chr8 (25-61)||(22601540-22601576)
chr8 (25-61)||(24846004-24846040)
[»] scaffold0009 (3 HSPs)
scaffold0009 (1-67)||(107758-107824)
scaffold0009 (1-66)||(108110-108175)
scaffold0009 (24-66)||(107932-107974)
[»] scaffold0063 (2 HSPs)
scaffold0063 (12-106)||(35191-35281)
scaffold0063 (1-89)||(34806-34894)
[»] scaffold0148 (2 HSPs)
scaffold0148 (4-59)||(32985-33040)
scaffold0148 (14-59)||(29318-29363)
[»] scaffold0085 (2 HSPs)
scaffold0085 (14-61)||(39462-39509)
scaffold0085 (14-61)||(39853-39900)
[»] scaffold0933 (1 HSPs)
scaffold0933 (1-50)||(544-593)


Alignment Details
Target: chr1 (Bit Score: 247; Significance: 1e-137; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 316
Target Start/End: Complemental strand, 47541620 - 47541309
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||  |||||||||    |||||      
T  47541620 tgataatgaatataaaatgtgaggattttaaaaacatttaatgaaatatagggactattcttcaaagggacataaaatgtaaggactaa----aaacaag 47541525  T
Q  101 tttaaccctaatttctttcacgtgatttattttaaacaacatatagttgcagaggagcctttctaggacaggaacacagtgttgaggtgataggaatgcg 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  47541524 tttaactctaatttctttcacgtgatttattttaaacaacatatagttgcagaggagcctttctaggacaggaacacagtgttggggtgataggaatgtg 47541425  T
Q  201 agtggcaatgtcacacttcaagacaaggatactctccttactacatgctctccgaataataccattgcaattccaaagttttaccgacttgttcattgtt 300  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47541424 agtggcaatgtcacacttcaagacaaggatactgtccttactacatggtctccgaataataccattgcaattccaaagttttaccgacttgttcattgtt 47541325  T
Q  301 ttcttctaacttaaac 316  Q
    ||||||||||||||||    
T  47541324 ttcttctaacttaaac 47541309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 143 - 316
Target Start/End: Complemental strand, 47540194 - 47540023
Alignment:
Q  143 atagttgcagaggagcctttctaggacaggaacacagtgttgaggtgataggaatgcgagtggcaatgtcacacttcaagacaaggatactctccttact 242  Q
    |||||||||||||||||||||||||| |||||||  |||||  ||||||||| ||  |||||||||||||||||||||||||||||||| | ||||||||    
T  47540194 atagttgcagaggagcctttctaggaaaggaaca--gtgtttgggtgatagggatatgagtggcaatgtcacacttcaagacaaggatattgtccttact 47540097  T
Q  243 acatgctctccgaataataccattgcaattccaaagttttaccgacttgttcattgttttcttctaacttaaac 316  Q
    || |||||||||||   ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  47540096 acgtgctctccgaacggtaccattgccattccaaagtgttaccgacttgttcattgttttcttctaacttaaac 47540023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 373 - 473
Target Start/End: Complemental strand, 47541252 - 47541152
Alignment:
Q  373 atcacatggtcatttaaagaaaaatctgcgcataagtacaaaaatatgtatgaaagaatccaaatatatttttgtttttatcttatagaccggaccaatc 472  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47541252 atcacatggtcatttaaagaaaaatctgtgcataagtacaaaaatatgcatgaaagaatccaaatatatttttgtttttatcttatagaccggaccaatc 47541153  T
Q  473 t 473  Q
    |    
T  47541152 t 47541152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 125 - 312
Target Start/End: Complemental strand, 47547687 - 47547499
Alignment:
Q  125 atttattttaaacaacatatagttgcagaggagcctttctaggacaggaacacagtgttgaggtgataggaatgcgagtggcaatgtcacacttcaagac 224  Q
    ||||||||||||| |  ||||||||||| ||||||| || |||| |||| | ||| || | |||||||| |||| |||||||||||||||||||||||||    
T  47547687 atttattttaaacgatttatagttgcagcggagcctatccaggaaaggatcccagcgtgggggtgatagaaatgtgagtggcaatgtcacacttcaagac 47547588  T
Q  225 aaggatactctccttactacatgctctccgaataataccattgcaattccaaagttttaccga-cttgttcattgttttcttctaactt 312  Q
    ||||||| | ||| ||||||||| ||||||||   ||| ||| |  ||||||||| ||||||| || ||||||||||||||||||||||    
T  47547587 aaggatattgtccctactacatgttctccgaaaggtactatttcccttccaaagtgttaccgacctcgttcattgttttcttctaactt 47547499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 374 - 473
Target Start/End: Complemental strand, 47539963 - 47539863
Alignment:
Q  374 tcacatggtcatttaaagaaaaatctgcgcataagtacaaaaatatgtatgaaagaatccaaatatatttttgtttttatcttataga-ccggaccaatc 472  Q
    |||||||| ||||||||||||||| || ||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||| ||| | |||||||||    
T  47539963 tcacatggccatttaaagaaaaatttgtgcataagaacaaaaatatgcatgaaagaatctaaatatatttttgtttttatcttaaagatctggaccaatc 47539864  T
Q  473 t 473  Q
    |    
T  47539863 t 47539863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 5683263 - 5683161
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||| ||| |||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||  |||||  ||||    ||||||||||||    
T  5683263 tgataatgaagataaaatgtgaggattttaaatacatttaatgaaatgtagggactatttttcaaagagacgcaaaatgtaagg----attaaaaacata 5683168  T
Q  101 tttaacc 107  Q
    |||||||    
T  5683167 tttaacc 5683161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 5683571 - 5683653
Alignment:
Q  23 ggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccct 109  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||| ||||||    |||||||||||||||||||    
T  5683571 ggattttaaaaatatttaatgaaatgtagggactattcttcaaaaagacgtaaaatataaggac----taaaaacatatttaaccct 5683653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9880586 - 9880482
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| ||   |||||  ||||||    ||||||||||    
T  9880586 tgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtagagacttttcttcaaagggatgcaaaatgtaaggac----taaaaacata 9880491  T
Q  101 tttaaccct 109  Q
    |||||||||    
T  9880490 tttaaccct 9880482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 1500982 - 1501034
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1500982 aaaatgtagggattttaaaaacatttaatgaaatgtagggactattcttcaaa 1501034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4288428 - 4288525
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    ||||||||||||||||||||| |||||||||||||||||     ||||||||||||||||||||||| | |  |||||| ||||||    ||||||||||    
T  4288428 tgataacgaatataaaatgtgaggattttaaaaacattt-----aatgtagggactattcttcaaaggggcgcaaaatataaggac----taaaaacata 4288518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5172847 - 5172782
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||| | |||||||||  ||||||||||||||||||||||||||||| ||||||||||||||    
T  5172847 tgataacgtagataaaatgtaaggattttaaaaacatttaatgaaatgtagagactattcttcaaa 5172782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 19895502 - 19895398
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa-gagacataaaatacaaggactaattaaaaacat 99  Q
    |||||||| | |||||||||| || ||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||  ||||||    |||||||||    
T  19895502 tgataacggagataaaatgtgagggttttaaaaacatttaattaaatgtatggactattcttcaaacgag-cataaaatgtaaggac----taaaaacat 19895408  T
Q  100 atttaaccct 109  Q
    ||||||||||    
T  19895407 atttaaccct 19895398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 18180266 - 18180370
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||||| | ||||||| || |||||||||||||||||||| ||||||| |||||||||||||||| | |  |||||| || |    ||||||||||||    
T  18180266 tgataacggagataaaatatgaggattttaaaaacatttaataaaatgtatggactattcttcaaagtggcgcaaaatataaag----attaaaaacata 18180361  T
Q  101 tttaaccct 109  Q
    |||||||||    
T  18180362 tttaaccct 18180370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 3591336 - 3591390
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||||| |||||||||||||||||||| ||||||| |||||||||||||||    
T  3591336 ataaaatgtgaggattttaaaaacatttaataaaatgtatggactattcttcaaa 3591390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 50359227 - 50359165
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttc 63  Q
    |||||||| | ||||||||||  ||||| ||||||||||||||||||||||||||||||||||    
T  50359227 tgataacggaaataaaatgtgaagatttaaaaaacatttaatgaaatgtagggactattcttc 50359165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19895788 - 19895853
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||||| ||||||| || | |||||||||||||||||| |||||||| ||||||||||||||    
T  19895788 tgataacgaagataaaatatgagaattttaaaaacatttaataaaatgtagagactattcttcaaa 19895853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 45664776 - 45664724
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    ||||||||||||||||||||||||||| | |||||||| ||||||||||||||    
T  45664776 aaaatgtggggattttaaaaacatttattaaaatgtagagactattcttcaaa 45664724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 8997429 - 8997382
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  8997429 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 8997382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 32266571 - 32266524
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  32266571 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 32266524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 40124164 - 40124117
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  40124164 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 40124117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 47410511 - 47410464
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  47410511 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 47410464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 47410855 - 47410902
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  47410855 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 47410902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6751341 - 6751407
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||| || |||||||||| |||||||||||| ||||||||||||||| ||||| ||||| ||||    
T  6751341 tgataacaaagataaaatgtgaggattttaaaaaaatttaatgaaatgtaaggacttttctttaaag 6751407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18179981 - 18179915
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||| |||||||||||||| |||||||||| || |||||||| |||||||    
T  18179981 tgataacggagataaaatgtgaggattttaaaaacaattaatgaaatataaggactatttttcaaag 18179915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 36793575 - 36793666
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccct 109  Q
    ||||||| ||||||||||||||||||| | |||||||| |||||||||||||||  ||  |||||| | ||||    |||||||||||||||||||    
T  36793575 aaaatgtagggattttaaaaacatttattaaaatgtagagactattcttcaaagtcacgcaaaatatagggac----taaaaacatatttaaccct 36793666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 48155064 - 48154974
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaacc 107  Q
    ||||||| || |||||||||||||||||||| ||||||| ||||||||||| |||| | | ||||||| ||||    |||||||||||||||||||    
T  48155064 ataaaatatgaggattttaaaaacatttaataaaatgtaaggactattctt-aaagcggcgtaaaatataagg----attaaaaacatatttaacc 48154974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 50359438 - 50359492
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||||| |||||||||||||||||||||||||  | |||||||||||||||    
T  50359438 ataaaatgtgaggattttaaaaacatttaatgaaataaaaggactattcttcaaa 50359492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 12869663 - 12869708
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||    
T  12869663 gggattttaaaaacatttattgaaatgtagggactattctttaaag 12869708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 1500140 - 1500100
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  1500140 gggattttaaaaacattcaatgaaatgtagggactattctt 1500100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 19976255 - 19976199
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaaga 68  Q
    ||||||||||||||||||||||||||||||| |||  || | |||||||||||||||    
T  19976255 ataaaatgtggggattttaaaaacatttaataaaaaataagaactattcttcaaaga 19976199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 31436371 - 31436480
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||||| | ||||||||||   |||||||||||||||||| |||| ||| ||||||||||||||  |||| |||||  |||||||||    || ||||    
T  31436371 tgataacggagataaaatgtgataattttaaaaacatttaataaaatatagtgactattcttcaaaaggacacaaaatgtaaggactaa----aatcata 31436466  T
Q  101 tttaaccctaattt 114  Q
    ||||||||| ||||    
T  31436467 tttaacccttattt 31436480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 9122773 - 9122726
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  9122773 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattct 9122726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 9123117 - 9123164
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  9123117 aaaatgtagggattttaaaaacatttattgaaatgtagagactattct 9123164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 17968125 - 17968078
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  17968125 aaaatgtagggattttaaaaacattcattgaaatgtagggactattct 17968078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 32266915 - 32266962
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  32266915 aaaatgtagggattttaaaaacatttattgaaatgtagggattattct 32266962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 40124508 - 40124555
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  40124508 aaaatgtagggattttaaaaacatttattgaaatgtagggattattct 40124555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 46802410 - 46802363
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| |||||||||||||| |||| ||||||||||||||||||||    
T  46802410 aaaatgtagggattttaaaaacttttattgaaatgtagggactattct 46802363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 48155278 - 48155333
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||||||  |||||||||||||||||||||||| |||| || |||||||||||    
T  48155278 ataaaatgtgaagattttaaaaacatttaatgaaatataggaacaattcttcaaag 48155333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 3591173 - 3591218
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||||    
T  3591173 gggattttaaaaacatttattgaaatgtaaggactatttttcaaag 3591218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6751149 - 6751072
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaat 78  Q
    |||||||| | |||||||| |  |||||| ||||||||||||||||| || ||| |||||||||||||| || |||||    
T  6751149 tgataacggagataaaatgcgatgatttttaaaacatttaatgaaatataaggattattcttcaaagaggcacaaaat 6751072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 46802754 - 46802799
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||    
T  46802754 aaaatgtagggattttaaaaacatttattaaaatgtagggactatt 46802799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 12868521 - 12868469
Alignment:
Q  15 aaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||| ||||||||||||| ||||| ||||||||||| ||||||||| ||||    
T  12868521 aaatgtagggattttaaaaatatttattgaaatgtaggaactattctttaaag 12868469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 30427762 - 30427719
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggacta 57  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||    
T  30427762 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 30427719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 30428106 - 30428153
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||| | ||||||||||| ||||||||    
T  30428106 aaaatgtagggattttaaaaacattcattgaaatgtaggaactattct 30428153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 45230218 - 45230175
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggacta 57  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||    
T  45230218 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 45230175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 45230570 - 45230609
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  45230570 gggattttaaaaacattcattgaaatgtagggactattct 45230609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 9880789 - 9880843
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||||| | |||||||||||||||||| |||| |||  |||||||||||||    
T  9880789 ataaaatgtgagaattttaaaaacatttaataaaatatagaaactattcttcaaa 9880843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 42723246 - 42723284
Alignment:
Q  4 taacgaatataaaatgtggggattttaaaaacatttaat 42  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  42723246 taacggatataaaatgtgaggattttaaaaacatttaat 42723284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 17968469 - 17968505
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgta 50  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  17968469 aaaatgtagggattttaaaaacatttattgaaatgta 17968505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 87249 - 87350
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||    |||||||    
T  87249 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagggacacaaaatataaggactaa----aaacata 87344  T
Q  101 tttaac 106  Q
    ||||||    
T  87345 tttaac 87350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31588334 - 31588400
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||  |||||||||||| ||||||||||||||||||||||||||||||||    
T  31588334 tgataacggagataaaatgttaggattttaaaaatatttaatgaaatgtagggactattcttcaaag 31588400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18999628 - 18999693
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    ||||||| || |||||||||| |||||||||||| ||||||||||||||| |||||||||||||||    
T  18999628 tgataacaaagataaaatgtgaggattttaaaaatatttaatgaaatgtatggactattcttcaaa 18999693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 3935684 - 3935748
Alignment:
Q  3 ataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||| || |||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||    
T  3935684 ataacaaagataaaatgtgaggattttaaaaacaattaatgaaatgtagggattattcttcaaag 3935748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 8750348 - 8750449
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||||| | ||||||| || |||||||||| ||||||||| ||||||||||||||||||||||||| ||  |||||  |||||||||    |||||||    
T  8750348 tgataacggagataaaatatgaggattttaaacacatttaataaaatgtagggactattcttcaaagaaacgcaaaatgtaaggactaa----aaacata 8750443  T
Q  101 tttaac 106  Q
    ||||||    
T  8750444 tttaac 8750449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 31176586 - 31176505
Alignment:
Q  24 gattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccct 109  Q
    ||||||||||||||||||||||||||| ||||| |||||||||| |||  |||||| ||||||    |||||||||||||||||||    
T  31176586 gattttaaaaacatttaatgaaatgtatggactgttcttcaaagggacgcaaaatataaggac----taaaaacatatttaaccct 31176505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 18339164 - 18339109
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  18339164 ataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaag 18339109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18999468 - 18999403
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||| | |||||||| | |||||||||||| ||||||||||||||| |||||||||||||||    
T  18999468 tgataacggagataaaatgagaggattttaaaaatatttaatgaaatgtatggactattcttcaaa 18999403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 21949823 - 21949880
Alignment:
Q  5 aacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    |||||||  ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  21949823 aacgaatgaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctt 21949880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 5747193 - 5747240
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  5747193 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 5747240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 6543503 - 6543456
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  6543503 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 6543456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 21949488 - 21949441
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  21949488 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 21949441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 28641593 - 28641640
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  28641593 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 28641640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 31162509 - 31162462
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  31162509 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 31162462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 39402300 - 39402253
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  39402300 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 39402253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 14626077 - 14626135
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    |||||||  ||| ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  14626077 tgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt 14626135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 19353070 - 19353161
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccct 109  Q
    ||||||| ||||||||||||||||||| ||||||||  ||||||||||||||||  ||| |||||  ||||||     ||||||||||||||||||    
T  19353070 aaaatgtagggattttaaaaacatttattgaaatgtgaggactattcttcaaagtcacacaaaatctaaggac----caaaaacatatttaaccct 19353161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 30415472 - 30415533
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttc 63  Q
    |||||||| | | |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  30415472 tgataacggagacaaaatgtgaggattttaaaaacatt-aatgaaatgtagggactattcttc 30415533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 4186843 - 4186790
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||| ||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  4186843 aaaatgtagggatattaaaaacatttattgaaatgtaggtactattcttcaaag 4186790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 8750112 - 8750006
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||||||| |||||| ||   ||||||||||| ||||||||||||||||||| |||| ||||||| | |  |||||  |||    |||||||||||||    
T  8750112 tgataacgaagataaaacgttacgattttaaaaatatttaatgaaatgtagggattattattcaaaggggcgcaaaatgtaag----aattaaaaacata 8750017  T
Q  101 tttaaccctaa 111  Q
    |||||||||||    
T  8750016 tttaaccctaa 8750006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 19352560 - 19352507
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||| ||||||||||||||||||| ||||||| | ||||||||||||||||    
T  19352560 aaaatgtagggattttaaaaacatttattgaaatgcaaggactattcttcaaag 19352507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 22231170 - 22231252
Alignment:
Q  23 ggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccct 109  Q
    |||||| |||||||||||||||||| |||||||||||||| |||| | |  |||||| ||||||    |||||||||||||||||||    
T  22231170 ggatttcaaaaacatttaatgaaatatagggactattctttaaaggggcgcaaaatataaggac----taaaaacatatttaaccct 22231252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 119272 - 119220
Alignment:
Q  15 aaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  119272 aaatgtagggattttaaaaacatttattgaaatgtaaggactattctttaaag 119220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 119786 - 119838
Alignment:
Q  15 aaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||| ||||||||||||||||||| ||||||| | ||||||||||||||||    
T  119786 aaatgtagggattttaaaaacatttattgaaatgcaaggactattcttcaaag 119838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 3191886 - 3191839
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  3191886 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattct 3191839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 3192232 - 3192279
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  3192232 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattct 3192279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 6543847 - 6543894
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  6543847 aaaatgtagggattttaaaaacatttattgaaatgtagggattattct 6543894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 18340661 - 18340704
Alignment:
Q  24 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||    
T  18340661 gattttaaaaacatttaatgaaatgtaaggactattcttaaaag 18340704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 28641249 - 28641202
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  28641249 aaaatgtagggattttaaaaacatttattgaaatgtagggattattct 28641202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 38834780 - 38834823
Alignment:
Q  15 aaatgtggggattttaaaaacatttaatgaaatgtagggactat 58  Q
    ||||||| | ||||||||||||||||||||||||||||||||||    
T  38834780 aaatgtgtgaattttaaaaacatttaatgaaatgtagggactat 38834823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8648053 - 8648115
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttc 63  Q
    |||||||| | | |||||||| |||||||||||| |||||||||||||||  |||||||||||    
T  8648053 tgataacggagaaaaaatgtgaggattttaaaaatatttaatgaaatgtaaagactattcttc 8648115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 87107 - 87058
Alignment:
Q  15 aaatgtggggattttaaaaacatttaatgaaatgtagggactattcttca 64  Q
    |||||||  ||||||||||||||||||||||||||||||  |||||||||    
T  87107 aaatgtgaagattttaaaaacatttaatgaaatgtaggggttattcttca 87058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 119099 - 119054
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  119099 aaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 119054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 15978467 - 15978389
Alignment:
Q  26 ttttaaaaacatttaatgaaatgtagggactattctt-caaagagacataaaatacaaggactaattaaaaacatatttaacc 107  Q
    |||||||||||||||||||||| ||| |||||||||| |||| | ||| |||||| ||||||    |||||||||||||||||    
T  15978467 ttttaaaaacatttaatgaaatatagagactattcttccaaaaaaacacaaaatataaggac----taaaaacatatttaacc 15978389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16284376 - 16284311
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||| | ||||||| || |||||||||||||||||||| |||| ||  ||||||||||||||    
T  16284376 tgataacggagataaaatatgaggattttaaaaacatttaataaaatataaagactattcttcaaa 16284311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 30351705 - 30351758
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||| || |||||||||| ||||| ||||||||||||||||||||| ||||    
T  30351705 aaaatgtaggaattttaaaaatatttattgaaatgtagggactattctttaaag 30351758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 31093428 - 31093473
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||    
T  31093428 aaaatgtagggattttaaaaacattcattgaaatgtagggactatt 31093473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 37813453 - 37813412
Alignment:
Q  25 attttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  37813453 attttaaaaacacttaatgaaatgtatggactattcttcaaa 37813412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 5746849 - 5746802
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| |||||||| |||||||||| ||||||||||||| ||||||    
T  5746849 aaaatgtagggatttttaaaacatttattgaaatgtagggattattct 5746802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 31162853 - 31162900
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||| ||| ||||||    
T  31162853 aaaatgtagggattttaaaaacatttattgaaatgtaaggattattct 31162900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 35383331 - 35383292
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtag 51  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  35383331 ataaaatatgaggattttaaaaacatttaatgaaatgtag 35383292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 39402646 - 39402693
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||| ||||| ||||||||| ||||||||||    
T  39402646 aaaatgtagggattttaaaaatatttattgaaatgtaaggactattct 39402693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 119959 - 120013
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaaga 68  Q
    |||||||  |||||||||||||||||| ||||||||| ||||||||  |||||||    
T  119959 aaaatgtaaggattttaaaaacatttattgaaatgtaaggactatttgtcaaaga 120013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 20892544 - 20892598
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    ||||||||||   |||||||||||||||||| ||| |||| ||||||||||||||    
T  20892544 ataaaatgtgataattttaaaaacatttaattaaacgtagagactattcttcaaa 20892598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 3406694 - 3406731
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  3406694 gggattttaaaaacatttattgaaatgtaaggactatt 3406731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 4187837 - 4187882
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    |||||||| |||||||||||| ||||| ||||||||| ||||||||    
T  4187837 aaaatgtgaggattttaaaaatatttattgaaatgtaaggactatt 4187882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 718233 - 718277
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    ||||||||||||||||||| ||||||||| | |||||| ||||||    
T  718233 gggattttaaaaacatttattgaaatgtaagaactattattcaaa 718277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 3406539 - 3406499
Alignment:
Q  23 ggattttaaaaacatttaatgaaatgtagggactattcttc 63  Q
    ||||||||||||||||||||||||| || | ||||||||||    
T  3406539 ggattttaaaaacatttaatgaaatatatgaactattcttc 3406499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 13987383 - 13987319
Alignment:
Q  3 ataacgaatataaaatgtggggattttaaaaa-catttaatgaaatgtagggactattcttcaaa 66  Q
    |||||| | |||||||||| | |||||||||| ||||||||||||| ||| || |||||||||||    
T  13987383 ataacggagataaaatgtgagaattttaaaaaacatttaatgaaatatagagattattcttcaaa 13987319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 2517515 - 2517409
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||||    |||||| |||    
T  2517515 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacgcaaaatgtaaggac----taaaaatata 2517420  T
Q  101 tttaaccctaa 111  Q
    |||||||||||    
T  2517419 tttaaccctaa 2517409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3691377 - 3691480
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| | |  |||||||||||||    ||||||||||    
T  3691377 tgataacggagataaaatgtgaagattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaaatacaaggac----taaaaacata 3691472  T
Q  101 tttaaccc 108  Q
    ||||||||    
T  3691473 tttaaccc 3691480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21267356 - 21267422
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  21267356 tgataatgaatataaaatgtgaggatttttaaaacatttaatgaaatgtagggactattcttcaaag 21267422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 21217014 - 21216957
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagag 69  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21217014 ataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagag 21216957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 21217320 - 21217414
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaacccta 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |  |||||  ||||||    ||||||||||||||||||||    
T  21217320 ataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggac----taaaaacatatttaacccta 21217414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 21265388 - 21265445
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagag 69  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21265388 ataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagag 21265445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 21265082 - 21265027
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21265082 ataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaag 21265027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 2191319 - 2191253
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  2191319 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaag 2191253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 24093258 - 24093192
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||| | || ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24093258 tgataacgaagagaagatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaag 24093192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 7083613 - 7083520
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccct 109  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||  ||| ||||||  ||||    |||||||||||||||| ||||    
T  7083613 ataaaatgtgaggattttaaaaaaatttaatgaaatgtagggactattcttcaaatggacgtaaaatgtaagg----attaaaaacatatttagccct 7083520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 3691174 - 3691120
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  3691174 ataaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattcttcaaa 3691120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 6476510 - 6476566
Alignment:
Q  5 aacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    |||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  6476510 aacgaatgaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct 6476566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 10709564 - 10709512
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  10709564 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattcttcaaa 10709512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 1804320 - 1804273
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  1804320 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 1804273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 1804664 - 1804711
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  1804664 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 1804711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 6476175 - 6476128
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  6476175 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 6476128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 11451188 - 11451235
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  11451188 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 11451235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 21182398 - 21182343
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||||||   |||||||||||||||||||||||||| ||||||||||||||||    
T  21182398 ataaaatgtgaaaattttaaaaacatttaatgaaatgtaaggactattcttcaaag 21182343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 27377737 - 27377690
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  27377737 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 27377690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 32114256 - 32114201
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||| ||||||||||||||||||||  | |||||||||||||||||||||    
T  32114256 ataaaatgtgaggattttaaaaacatttaatagattgtagggactattcttcaaag 32114201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 39729595 - 39729703
Alignment:
Q  2 gataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatat 101  Q
    ||||||| | |||||||||| |||||||||||| |||||||||||| ||  ||||||||||||||  |||  |||||| |||||||||    |||| ||     
T  39729595 gataacggagataaaatgtgaggattttaaaaatatttaatgaaatataaagactattcttcaaactgacgcaaaatataaggactaa----aaacgtaa 39729690  T
Q  102 ttaaccctaattt 114  Q
    |||||||||||||    
T  39729691 ttaaccctaattt 39729703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 3624925 - 3624967
Alignment:
Q  25 attttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  3624925 attttaaaaacatttattgaaatgtagggactattcttcaaag 3624967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 23221923 - 23221870
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||| ||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  23221923 aaaatgtagggatattaaaaacatttattgaaatgtaggtactattcttcaaag 23221870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24093544 - 24093609
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||| | |||||||||  |||||||||||||||||||| |||| |||| |||||||||||||    
T  24093544 tgataacggagataaaatgtaaggattttaaaaacatttaataaaatataggcactattcttcaaa 24093609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 3854499 - 3854546
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  3854499 aaaatgtagggattttaaaaacattcattgaaatgtagggactattct 3854546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10706639 - 10706703
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||| |||||||||||| |||||||||||| ||  |||||||||||||||    
T  10706639 tgataacggagataaaatgtgaggattttaaaaatatttaatgaaatata--gactattcttcaaag 10706703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 12090127 - 12090174
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  12090127 aaaatgtagggattttaaaaacattcattgaaatgtagggactattct 12090174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 34037897 - 34037850
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  34037897 aaaatgtagggattttaaaaacattcattgaaatgtagggactattct 34037850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 2035699 - 2035649
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    ||||||||| ||||||||||||||||||| | ||||||||||| |||||||    
T  2035699 ataaaatgtagggattttaaaaacatttattaaaatgtagggattattctt 2035649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 2036602 - 2036652
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    ||||||| | ||||||||||||||||| | |||||||||||||||||||||    
T  2036602 ataaaatatagggattttaaaaacattaattgaaatgtagggactattctt 2036652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 39947087 - 39947140
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||  |||||||||||||||||| ||||||||| |||||||| |||||||    
T  39947087 aaaatgtacggattttaaaaacatttattgaaatgtaaggactattgttcaaag 39947140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 44934684 - 44934729
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  44934684 aaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 44934729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 18105805 - 18105753
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    ||||||| || ||||||||||| |||| ||||||||||||| |||||||||||    
T  18105805 aaaatgtaggaattttaaaaacctttattgaaatgtagggaatattcttcaaa 18105753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 39945922 - 39945878
Alignment:
Q  23 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||    
T  39945922 ggattttaaaaacatttattgaaatgtaaggactattgttcaaag 39945878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 3854155 - 3854112
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggacta 57  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||    
T  3854155 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 3854112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 11450844 - 11450797
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| |||||||| |||||||||| ||||||||||||| ||||||    
T  11450844 aaaatgtagggatttttaaaacatttattgaaatgtagggattattct 11450797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 22701601 - 22701558
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggacta 57  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||    
T  22701601 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 22701558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 27378081 - 27378128
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| |||||||| |||||||||| ||||||||||||| ||||||    
T  27378081 aaaatgtagggatttttaaaacatttattgaaatgtagggattattct 27378128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 32860905 - 32860850
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||  ||||||||||||||||||||||||| ||  ||||||| |||||||    
T  32860905 ataaaatgttaggattttaaaaacatttaatgaaatataacgactatttttcaaag 32860850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 39096612 - 39096565
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    |||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  39096612 aaaatgtatggattttaaaaacatttattgaaatgtaaggactattct 39096565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 39096958 - 39097005
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||| ||| ||||||    
T  39096958 aaaatgtagggattttaaaaacatttattgaaatgtaaggattattct 39097005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 44930082 - 44930027
Alignment:
Q  4 taacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||| ||| ||||||| ||||||||||||| ||||| ||||||||| ||||||||    
T  44930082 taacggataaaaaatgtagggattttaaaaatatttattgaaatgtaaggactatt 44930027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 32114470 - 32114520
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    ||||| |||| | |||||||||| ||||||||||||||| |||||||||||    
T  32114470 ataaagtgtgagaattttaaaaatatttaatgaaatgtaaggactattctt 32114520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 10708112 - 10708067
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||| || |||||||||||||||| ||||||||| ||||||||    
T  10708112 aaaatgtaggaattttaaaaacatttattgaaatgtaaggactatt 10708067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 10710831 - 10710884
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||| || |||||||||||||||| ||||||| | || |||||||||||||    
T  10710831 aaaatgtaggaattttaaaaacatttattgaaatgcaagggctattcttcaaag 10710884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 23222864 - 23222909
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    |||||||| ||||||||||||||| || ||||||||| ||||||||    
T  23222864 aaaatgtgaggattttaaaaacatatattgaaatgtaaggactatt 23222909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 24093410 - 24093365
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||||||||||||||| ||||||| | |||||||| |||||||    
T  24093410 gggattttaaaaacatttattgaaatgcaaggactatttttcaaag 24093365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 26525904 - 26525941
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  26525904 gggattttaaaaacatttattgaaatatagggactatt 26525941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 32861049 - 32861094
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||||||||||||||| |||||| || |||||||| |||||||    
T  32861049 gggattttaaaaacatttattgaaatataaggactatttttcaaag 32861094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 39600842 - 39600768
Alignment:
Q  33 aacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccctaa 111  Q
    ||||||||||||||||||  ||||||||||  |||||||  |||||  ||||    |||||||||||||||||||||||    
T  39600842 aacatttaatgaaatgtaaagactattctttcaagagacgcaaaatgtaagg----attaaaaacatatttaaccctaa 39600768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 2606655 - 2606695
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagg 52  Q
    ||||||| || | ||||||||||||||||||||||||||||    
T  2606655 ataaaatatgagaattttaaaaacatttaatgaaatgtagg 2606695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 12089783 - 12089747
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgta 50  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  12089783 aaaatgtagggattttaaaaacatttattgaaatgta 12089747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 5e-26; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 29691627 - 29691518
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||   |||||| ||||||    ||||||||||    
T  29691627 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaatggatgcaaaatataaggac----taaaaacata 29691532  T
Q  101 tttaaccctaattt 114  Q
    ||||||||||||||    
T  29691531 tttaaccctaattt 29691518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 30608621 - 30608727
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| || |||||  |||| |    ||||||||||    
T  30608621 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaagaggcacaaaatgtaaggtc----taaaaacata 30608716  T
Q  101 tttaaccctaa 111  Q
    |||||||||||    
T  30608717 tttaaccctaa 30608727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3296645 - 3296579
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  3296645 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggaatattcttcaaag 3296579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 51906807 - 51906873
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  51906807 tgataacggagataaaatgtgaggattttaaaaacatttaatgagatgtagggactattcttcaaag 51906873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 51906522 - 51906416
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||||| | |||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||| |  |||||  || |||    ||||||||||    
T  51906522 tgataacggagataaaatgtgaggatattaaaaacatttaatgaaacgtagggactattcttcaaagaggcgcaaaatgtaaagac----taaaaacata 51906427  T
Q  101 tttaaccctaa 111  Q
    |||||||||||    
T  51906426 tttaaccctaa 51906416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3296932 - 3296998
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||  |||||||||||||||||||||||| ||||||||||||||||||||    
T  3296932 tgataacggagataaaatgtaaggattttaaaaacatttaatgaaacgtagggactattcttcaaag 3296998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 34129299 - 34129353
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  34129299 ataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaa 34129353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30608347 - 30608282
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||| | |||||||||| |||||||||||| || ||||||||||||||||||||||||||||    
T  30608347 tgataacggagataaaatgtgaggattttaaaaatatataatgaaatgtagggactattcttcaaa 30608282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 38759806 - 38759738
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagag 69  Q
    |||||||| | ||||||| || ||||||||||||||||||||||||||||  |||||||||||||||||    
T  38759806 tgataacggagataaaatttgaggattttaaaaacatttaatgaaatgtatagactattcttcaaagag 38759738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 48553998 - 48553910
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaa 89  Q
    |||||||| | |||||||||| ||||||||||||  |||||||||||||| |||||||||||||||| |||  |||||  |||||||||    
T  48553998 tgataacggagataaaatgtgaggattttaaaaaggtttaatgaaatgtatggactattcttcaaagggacgcaaaatgtaaggactaa 48553910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 17288373 - 17288427
Alignment:
Q  13 taaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||| |||||||    
T  17288373 taaaatgtagggattttaaaaacatttattgaaatgtagggactattattcaaag 17288427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 40841884 - 40841942
Alignment:
Q  4 taacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    ||||||||  ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  40841884 taacgaatgaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctt 40841942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 26984235 - 26984178
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagag 69  Q
    |||||||||| |||||||||||||||||||| || | |||||||||||||||||||||    
T  26984235 ataaaatgtgaggattttaaaaacatttaataaagtctagggactattcttcaaagag 26984178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 30953000 - 30953057
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagag 69  Q
    |||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  30953000 ataaaatgttaggattttaaaaacatttaatgaaatgtagggaccattcttctaagag 30953057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 7118163 - 7118256
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccct 109  Q
    ||||||| || | |||||||||||||||||||||||||| |||||||||||||||| | |  |||||  ||||||    |||||||||||||||||||    
T  7118163 ataaaatttgagaattttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaaggac----taaaaacatatttaaccct 7118256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 40841550 - 40841502
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  40841550 aaaatgtagggattttaaaaacatttattgaaatgtagggactattctt 40841502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 55347970 - 55348018
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  55347970 aaaatgtagggattttaaaaacatttattgaaatgtagggactattctt 55348018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 2669095 - 2669048
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  2669095 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 2669048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 2669439 - 2669486
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  2669439 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 2669486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 12108290 - 12108337
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  12108290 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 12108337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 12922730 - 12922683
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  12922730 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 12922683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 28957743 - 28957790
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  28957743 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 28957790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 38026108 - 38026155
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  38026108 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 38026155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 1791228 - 1791182
Alignment:
Q  23 ggattttaaaaacatttaatgaaatgtagggactattcttcaaagag 69  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||    
T  1791228 ggatttttaaaacatttaatgaaatgtatggactattcttcaaagag 1791182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34129096 - 34129030
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||| ||||||| || | ||||||||||| |||||| |||| |||||||||||||||||||    
T  34129096 tgataacgaagataaaatatgagaattttaaaaacgtttaataaaatatagggactattcttcaaag 34129030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 54142414 - 54142361
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||  |||||||||||||||||| ||||||||| ||||||||||||||||    
T  54142414 aaaatgtaaggattttaaaaacatttattgaaatgtatggactattcttcaaag 54142361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 54143502 - 54143555
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||  |||||||||||||||||| | ||||||||||||||||||||||||    
T  54143502 aaaatgtaaggattttaaaaacatttattaaaatgtagggactattcttcaaag 54143555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 56106451 - 56106515
Alignment:
Q  3 ataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||| | |||||||| | |||||||||||||||||||| |||| |||| ||||||||||||||    
T  56106451 ataacggagataaaatgagaggattttaaaaacatttaataaaatataggaactattcttcaaag 56106515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 28505297 - 28505250
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  28505297 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattct 28505250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 28957399 - 28957352
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  28957399 aaaatgtagggattttaaaaacatttattgaaatgtagggattattct 28957352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 31227967 - 31227920
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  31227967 aaaatgtagggattttaaaaacatttattgaaatgtagggattattct 31227920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 31228311 - 31228358
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  31228311 aaaatgtagggattttaaaaacatttattgaaatgtaggaactattct 31228358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 35166854 - 35166901
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatg 48  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||    
T  35166854 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatg 35166901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 41510159 - 41510104
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||| || |||||||| ||| ||||||| ||||||||||||||||||||||||    
T  41510159 ataaaatatgaggattttagaaatatttaataaaatgtagggactattcttcaaag 41510104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 43979990 - 43980037
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  43979990 aaaatgtagggattttaaaaacattcattgaaatgtagggactattct 43980037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 48760114 - 48760173
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagac 71  Q
    ||||||||||  |||||||||||||||||||||| |||| | ||||||||||||| ||||    
T  48760114 ataaaatgtgaagattttaaaaacatttaatgaattgtacgaactattcttcaaaaagac 48760173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 55347649 - 55347602
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||    
T  55347649 aaaatgtagggattttaaaaacatttattaaaatgtagggactattct 55347602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 5544875 - 5544821
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||||| | |||||||||| |||||||||||| |||| |||||||||||||    
T  5544875 ataaaatgtgagaattttaaaaatatttaatgaaatataggaactattcttcaaa 5544821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 25917050 - 25917096
Alignment:
Q  25 attttaaaaacatttaatgaaatgtagggactattcttcaaagagac 71  Q
    |||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  25917050 attttaaaaacatttaatgaaatgtatggattattcttcaaatagac 25917096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 34294529 - 34294488
Alignment:
Q  24 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  34294529 gattttaaaaacatttaatgaaatgta-ggactattcttcaaa 34294488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 54168824 - 54168915
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccct 109  Q
    ||||||| ||||||||||||| ||||| | ||||||||||| ||||||||||||  ||  |||||| | ||    |||||||||||||||||||||    
T  54168824 aaaatgtagggattttaaaaatatttattaaaatgtagggattattcttcaaagtcacgcaaaatataggg----attaaaaacatatttaaccct 54168915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 10580121 - 10580076
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||||    
T  10580121 gggattttaaaaacatttattgaaatgtaaggactatttttcaaag 10580076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 21235116 - 21235071
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  21235116 aaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 21235071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 21235462 - 21235507
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||||    
T  21235462 aaaatgtagagattttaaaaacatttattgaaatgtagggactatt 21235507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26168380 - 26168448
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtag--ggactattcttcaaag 67  Q
    ||||||| || ||||||||||| ||||||| ||||||||||| ||||||||  |||||||||| |||||    
T  26168380 tgataacaaagataaaatgtggagattttagaaacatttaataaaatgtaggaggactattctacaaag 26168448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 47053850 - 47053805
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  47053850 aaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 47053805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 30048006 - 30048070
Alignment:
Q  3 ataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||| | ||||||| || |||||||||||| ||||||||||||||| | ||| ||||||||||    
T  30048006 ataacggagataaaatatgaggattttaaaaatatttaatgaaatgtaagaactgttcttcaaag 30048070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 30062347 - 30062411
Alignment:
Q  3 ataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||| | ||||||| || |||||||||||| ||||||||||||||| | ||| ||||||||||    
T  30062347 ataacggagataaaatatgaggattttaaaaatatttaatgaaatgtaagaactgttcttcaaag 30062411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 54167583 - 54167535
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    ||||||| ||||||||||||||||||| |||||| || |||||||||||    
T  54167583 aaaatgtagggattttaaaaacatttattgaaatataaggactattctt 54167535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 1317149 - 1317106
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggacta 57  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||    
T  1317149 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 1317106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 12923074 - 12923117
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggacta 57  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||    
T  12923074 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 12923117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 30545802 - 30545759
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggacta 57  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||    
T  30545802 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 30545759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 43979646 - 43979603
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggacta 57  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||    
T  43979646 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 43979603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 46263067 - 46263110
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggacta 57  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||    
T  46263067 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 46263110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 47058498 - 47058553
Alignment:
Q  4 taacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||| ||| ||||||| ||||||||||||||||||| |||||||||  |||||||    
T  47058498 taacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaagactatt 47058553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 49424544 - 49424490
Alignment:
Q  13 taaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| ||||||||||||||||||| ||| |||||  ||||||| |||||||    
T  49424544 taaaatgtagggattttaaaaacatttattgatatgtaaagactattattcaaag 49424490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 52398782 - 52398716
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||| ||||||| |  | |||||||||| ||||||| ||||| || |||||||||||||||    
T  52398782 tgataacgaaaataaaatataagaattttaaaaatatttaataaaatgcagagactattcttcaaag 52398716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 789983 - 789938
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||| ||||||||||||||||| | ||||||||| ||||||||    
T  789983 aaaatgtagggattttaaaaacattcattgaaatgtatggactatt 789938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26168094 - 26168034
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    |||||||| | |||||||||| |||||||||||| ||||||| ||||||||  |||||||||    
T  26168094 tgataacggagataaaatgtgaggattttaaaaatatttaat-aaatgtagaaactattctt 26168034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 1317494 - 1317538
Alignment:
Q  15 aaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    |||||| || |||||||||||||| | ||||||||||||||||||    
T  1317494 aaatgtaggaattttaaaaacattcattgaaatgtagggactatt 1317538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 1791389 - 1791429
Alignment:
Q  27 tttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||||||| ||||||||| |||||||| |||||||    
T  1791389 tttaaaaacatttattgaaatgtaaggactatttttcaaag 1791429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 3296793 - 3296753
Alignment:
Q  27 tttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||||||| | ||||||| ||||||||||||||||    
T  3296793 tttaaaaacatttattaaaatgtaaggactattcttcaaag 3296753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 35166708 - 35166748
Alignment:
Q  27 tttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||||||| | ||||||| ||||||||||||||||    
T  35166708 tttaaaaacatttattaaaatgtaaggactattcttcaaag 35166748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 9e-25; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 5974111 - 5974008
Alignment:
Q  3 ataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatt 102  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    |||||| ||||||    ||||||||||||    
T  5974111 ataacggaaataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggtgcaaaatataaggac----taaaaacatatt 5974016  T
Q  103 taacccta 110  Q
    ||||||||    
T  5974015 taacccta 5974008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 8710331 - 8710433
Alignment:
Q  3 ataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatt 102  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    |||||| ||||||    ||||||||||||    
T  8710331 ataacgaa-ataaaatgtggggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatataaggac----taaaaacatatt 8710425  T
Q  103 taacccta 110  Q
    ||||||||    
T  8710426 taacccta 8710433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 4510268 - 4510184
Alignment:
Q  23 ggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccctaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||| || | ||||||  ||||||    |||||||||||||||||||||    
T  4510268 ggattttaaaaacatttaatgaaatgtagggactattcttcaaataggcgtaaaatgtaaggac----taaaaacatatttaaccctaa 4510184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 17157637 - 17157571
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaat 78  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||||||||||| ||| | ||||||    
T  17157637 ataaaatgtgaggattttaaaaatatttaatgaaatgtatggactattcttcaatgaggcgtaaaat 17157571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 211530 - 211477
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  211530 aaaatgtgaggattttaaaatcatttaatgaaatgtacggactattcttcaaag 211477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 20522156 - 20522209
Alignment:
Q  13 taaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||||    
T  20522156 taaaatgtagtgattttaaaaacatttattgaaatgtagggactattcttcaaa 20522209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 21113120 - 21113067
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaa 65  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||||||||||    
T  21113120 ataaaatgtgagaattttaaaaacatttaatgaaatgtagagactattcttcaa 21113067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 14257235 - 14257188
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  14257235 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 14257188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 14257579 - 14257626
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  14257579 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 14257626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 20824252 - 20824205
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  20824252 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 20824205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1869553 - 1869503
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtag 51  Q
    |||||||| | |||||||||| |||||||||||||||||||||||||||||    
T  1869553 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtag 1869503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7645970 - 7646036
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||| | ||||| |||||||||| ||||||||| ||||||||||||||||    
T  7645970 tgataacggagataaaatgtgagaatttttaaaacatttattgaaatgtaaggactattcttcaaag 7646036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 211719 - 211774
Alignment:
Q  12 ataaaatgtggggattttaaaaac-atttaatgaaatgtagggactattcttcaaa 66  Q
    ||||||||||  |||||||||||  |||||||||||||||||||||||||||||||    
T  211719 ataaaatgtgaagattttaaaaaatatttaatgaaatgtagggactattcttcaaa 211774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 6162689 - 6162736
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  6162689 aaaatgtagggattttaaaaacatttattgaaatgtagagactattct 6162736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 15147806 - 15147759
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  15147806 aaaatgtagggattttaaaaacatttattgaaatgtagggattattct 15147759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 20824596 - 20824643
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  20824596 aaaatgtagggattttaaaaacatttattgaaatgtagggattattct 20824643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 33107362 - 33107409
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  33107362 aaaatgtagggattttaaaaacattcattgaaatgtagggactattct 33107409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 19595648 - 19595698
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    ||||||| | ||||||||||||| ||||| |||||||||||||||||||||    
T  19595648 ataaaatatagggattttaaaaatatttattgaaatgtagggactattctt 19595698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 34984554 - 34984592
Alignment:
Q  23 ggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  34984554 ggattttaaaaacatttattgaaatgtagggactattct 34984592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 14712911 - 14712866
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||||    
T  14712911 gggattttaaaaacatttattgaaatgtaaggactatttttcaaag 14712866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 15148150 - 15148195
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||||    
T  15148150 aaaatgtagggattttaaaatcatttattgaaatgtagggactatt 15148195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 6162333 - 6162286
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| |||||||||  |||||||||    
T  6162333 aaaatgtagggattttaaaaacatttattgaaatgtaatgactattct 6162286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 66
Target Start/End: Original strand, 14713024 - 14713059
Alignment:
Q  31 aaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||||||||||||||| |||||||||||||||    
T  14713024 aaaacatttaatgaaatgtaaggactattcttcaaa 14713059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 67
Target Start/End: Original strand, 17157856 - 17157887
Alignment:
Q  36 atttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||||||||||||||||||||||||||||    
T  17157856 atttaatgaaatgtagggactattcttcaaag 17157887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 20228236 - 20228283
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| | ||||||||| ||||||||    
T  20228236 aaaatgtagggattttaaaaacatttattaaaatgtaggaactattct 20228283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 22122220 - 22122267
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| | ||||||||| ||||||||    
T  22122220 aaaatgtagggattttaaaaacatttattaaaatgtaggaactattct 22122267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 33107018 - 33106975
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggacta 57  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||    
T  33107018 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 33106975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 14712757 - 14712672
Alignment:
Q  3 ataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaa 89  Q
    |||||| ||||||||| |  |||||| ||||||||||||| |||| || ||| |||||||||||||| | ||||||  |||||||||    
T  14712757 ataacgcatataaaatataaggatttaaaaaacatttaataaaatata-ggattattcttcaaagaggcgtaaaatgtaaggactaa 14712672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 19579201 - 19579251
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    ||||||| | ||||||||||||||||||| ||||||| || ||||||||||    
T  19579201 ataaaatatagggattttaaaaacatttattgaaatgcagagactattctt 19579251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 5975910 - 5975866
Alignment:
Q  24 gattttaaaaacatttaatgaaatgtagggactattcttcaaagag 69  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||    
T  5975910 gattttaaaaacatttattaaaatgta-ggactattcttcaaagag 5975866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 20521266 - 20521225
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactattcttc 63  Q
    ||||||||||||||||||  |||||| |||||||||||||||    
T  20521266 gggattttaaaaacattttttgaaatatagggactattcttc 20521225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22814398 - 22814293
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | |  |||||  |||    |||||||||||||    
T  22814398 tgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaag----aattaaaaacata 22814303  T
Q  101 tttaacccta 110  Q
    ||||||||||    
T  22814302 tttaacccta 22814293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 51755903 - 51755969
Alignment:
Q  2 gataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaaga 68  Q
    ||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  51755903 gataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaaga 51755969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 25770423 - 25770317
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| || | |||||  ||||||    ||||||||||    
T  25770423 tgataacgatgataaaatgtgaggattctaaaaacatttaatgaaatgtagggactattcttcaaagggatacaaaatgtaaggac----taaaaacata 25770328  T
Q  101 tttaaccctaa 111  Q
    || ||||||||    
T  25770327 ttgaaccctaa 25770317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43933542 - 43933477
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  43933542 tgataacgaagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaa 43933477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 9217920 - 9217856
Alignment:
Q  3 ataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9217920 ataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaag 9217856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9218501 - 9218567
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  9218501 tgataacgaagataaaatgtgatgattttaaaaacatttaatgaaatatagggactattcttcaaag 9218567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44504374 - 44504440
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  44504374 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaag 44504440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44504194 - 44504129
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||| | |||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  44504194 tgataacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaa 44504129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13637768 - 13637834
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||| |||||||||||| |||||||||||||||| |||||||||||||||    
T  13637768 tgataacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagagactattcttcaaag 13637834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 51471437 - 51471371
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||| |||||||||||||||||||||||||||||  ||||||||||||||    
T  51471437 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagaaactattcttcaaag 51471371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 132062 - 132113
Alignment:
Q  16 aatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  132062 aatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaag 132113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 45539307 - 45539249
Alignment:
Q  4 taacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    ||||||||  ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  45539307 taacgaatgaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctt 45539249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 48868587 - 48868641
Alignment:
Q  13 taaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||| |||||||    
T  48868587 taaaatgtagggattttaaaaacatttattgaaatgtagggactattattcaaag 48868641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 33225581 - 33225532
Alignment:
Q  10 atataaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  33225581 atataaaatgtggggattttaaaaacatttacttaaatgtagggactatt 33225532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37172183 - 37172122
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    |||||||| | ||||| |||| ||||||||||||||||||||||||||||| ||||||||||    
T  37172183 tgataacggagataaactgtgaggattttaaaaacatttaatgaaatgtagagactattctt 37172122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 37172475 - 37172573
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccctaa 111  Q
    ||||||||||| ||||||||||||||||||| || |||||| | |||||||||||| ||| |||||  |||||    |||||||| |||||||||||| |    
T  37172475 ataaaatgtggagattttaaaaacatttaataaagtgtaggaattattcttcaaagggacgtaaaacgcaagg----attaaaaatatatttaaccctta 37172570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 45539641 - 45539689
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  45539641 aaaatgtagggattttaaaaacatttattgaaatgtagggactattctt 45539689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 36899342 - 36899295
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  36899342 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 36899295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 42606368 - 42606321
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  42606368 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 42606321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 46689770 - 46689723
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  46689770 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 46689723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 22814597 - 22814680
Alignment:
Q  29 taaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccctaatttct 116  Q
    |||||||||||||||||||||| | |||||| ||||||||| || |||||| ||| ||    ||||||||||||||||||||| ||||    
T  22814597 taaaaacatttaatgaaatgtatgaactatttttcaaagaggcacaaaatataagtac----taaaaacatatttaaccctaaattct 22814680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34743458 - 34743524
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||  |||||||||||| ||||||| |||||||||||||||||||| |||  |||||||||||    
T  34743458 tgataacatatataaaatgtgaggatttttaaaacatttaatgaaatgtaaggataattcttcaaag 34743524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 38485777 - 38485711
Alignment:
Q  23 ggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaa 89  Q
    ||||||||||||||| |||| ||||||| |||||||||||||||||| || |||||  |||||||||    
T  38485777 ggattttaaaaacatataataaaatgtatggactattcttcaaagaggcacaaaatgtaaggactaa 38485711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 50732327 - 50732261
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||| | |||||||||||| ||||||||||||||| |||||||| |||||||    
T  50732327 tgataacggagataaaatgcgaggattttaaaaatatttaatgaaatgtatggactatttttcaaag 50732261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 50780528 - 50780594
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||| | |||||||||||| ||||||||||||||| |||||||| |||||||    
T  50780528 tgataacggagataaaatgcgaggattttaaaaatatttaatgaaatgtatggactatttttcaaag 50780594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 54588547 - 54588493
Alignment:
Q  13 taaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| || |||||||||||||||| ||||||||| ||||||||||||||||    
T  54588547 taaaatgtaggaattttaaaaacatttattgaaatgtatggactattcttcaaag 54588493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 45728335 - 45728409
Alignment:
Q  31 aaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccct 109  Q
    |||| ||||||||||||||| |||||||||||||||| |||| |||||  ||||||    |||||||||||||||||||    
T  45728335 aaaatatttaatgaaatgtatggactattcttcaaagggacacaaaatgtaaggac----taaaaacatatttaaccct 45728409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 2388720 - 2388673
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  2388720 aaaatgtagggattttaaaaacatttattgaaatgtagagactattct 2388673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 2389064 - 2389111
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||    
T  2389064 aaaatgtagggattttaaaaacatttattaaaatgtagggactattct 2389111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 4199895 - 4199934
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  4199895 gggattttaaaaacatttattgaaatgtagggactattct 4199934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 20831092 - 20831147
Alignment:
Q  4 taacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||| ||| ||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  20831092 taacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 20831147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27013511 - 27013448
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttca 64  Q
    |||||||| | |||||||||  |||||||||||||||||||| ||||| ||| |||||||||||    
T  27013511 tgataacggagataaaatgtaaggattttaaaaacatttaataaaatgcaggaactattcttca 27013448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 34949844 - 34949797
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  34949844 aaaatgtagggattttaaaaacattcattgaaatgtagggactattct 34949797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 36899694 - 36899733
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  36899694 gggattttaaaaacatttattgaaatgtagggactattct 36899733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 42606712 - 42606759
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  42606712 aaaatgtagggattttaaaaatatttattgaaatgtagggactattct 42606759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 46690114 - 46690161
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  46690114 aaaatgtagggattttaaaaacatttattgaaatgtagggattattct 46690161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 20826817 - 20826772
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  20826817 aaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 20826772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 22407275 - 22407320
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||    
T  22407275 aaaatgtagggattttaaaaacattcattgaaatgtagggactatt 22407320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 25770728 - 25770769
Alignment:
Q  25 attttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  25770728 attttaaaaacatttaataaaatgtaggaactattcttcaaa 25770769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 27475475 - 27475431
Alignment:
Q  17 atgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||    
T  27475475 atgtagggattttaaaaacattcattgaaatgtagggactattct 27475431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 4199541 - 4199494
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| |||||| || ||||||||||    
T  4199541 aaaatgtagggattttaaaaacatttattgaaatataaggactattct 4199494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 22406931 - 22406888
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggacta 57  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||    
T  22406931 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 22406888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 34950188 - 34950231
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggacta 57  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||    
T  34950188 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 34950231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 3799812 - 3799766
Alignment:
Q  13 taaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    |||||||| ||||||||||||||||||| | |||||||| |||||||    
T  3799812 taaaatgtagggattttaaaaacatttacttaaatgtagagactatt 3799766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 43933727 - 43933780
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    ||||||| || |||||||||||||||||||||||| |||| ||||||| ||||||    
T  43933727 ataaaatatgaggattttaaaaacatttaatgaaa-gtagagactatttttcaaa 43933780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 47343725 - 47343771
Alignment:
Q  13 taaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    |||||||| ||||||||||||||||||| | |||||||| |||||||    
T  47343725 taaaatgtagggattttaaaaacatttacttaaatgtagagactatt 47343771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 48867740 - 48867694
Alignment:
Q  13 taaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||||  |||||||||||| ||||| ||||||||||||||||||    
T  48867740 taaaatgtaaggattttaaaaatatttattgaaatgtagggactatt 48867694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 33226919 - 33226968
Alignment:
Q  10 atataaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||||| ||| ||||||||||||||||| | |||| |||||||||||    
T  33226919 atataaaatttggagattttaaaaacatttacttaaatatagggactatt 33226968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 35300833 - 35300788
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||| ||||||||||||||||||| ||||||||| ||| ||||    
T  35300833 aaaatgtagggattttaaaaacatttattgaaatgtaaggattatt 35300788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 25770575 - 25770531
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    ||||||||||||||||||| |||||||||  ||||||| ||||||    
T  25770575 gggattttaaaaacatttattgaaatgtaaagactatttttcaaa 25770531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 5e-23; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 17075310 - 17075214
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccctaa 111  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | |  |||||| ||||||    |||||||||||||||||||||    
T  17075310 ataaaatgtgaggattttaaaaacttttaatgaaatgtagggactattcttcaaagcggcgcaaaatataaggac----taaaaacatatttaaccctaa 17075215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 17075616 - 17075673
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagag 69  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17075616 ataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagag 17075673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20544013 - 20543910
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||||| | ||||||| || |||||||||||| |||||||||||||||||||||||||||||||| | || |||||  |||    |||||||||||||    
T  20544013 tgataacggagataaaatatgaggattttaaaaaaatttaatgaaatgtagggactattcttcaaaggggcacaaaatgtaag----aattaaaaacata 20543918  T
Q  101 tttaaccc 108  Q
    ||||||||    
T  20543917 tttaaccc 20543910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22948866 - 22948932
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  22948866 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagagactattcttcaaag 22948932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 32092330 - 32092227
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    ||||||| || | |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |  |||||  ||||||    ||||||||||    
T  32092330 tgataacaaacacaaaatgtgaggattttaaaaacatttaatgaaatgcagggactattcttcaaagaggcgcaaaatgtaaggac----taaaaacata 32092235  T
Q  101 tttaaccc 108  Q
    ||||||||    
T  32092234 tttaaccc 32092227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 42750108 - 42750172
Alignment:
Q  3 ataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||| | |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  42750108 ataacggagataaaatgtgaggattttaaaaacgtttaatgaaatgtagggactattcttcaaag 42750172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11974766 - 11974700
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||  ||||||| |||||||    
T  11974766 tgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtacagactatttttcaaag 11974700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20544299 - 20544363
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||||| |||||||||| | |||||||||||||||||||||||||| |||||||||||||||    
T  20544299 tgataacgaagataaaatgtgag-attttaaaaacatttaatgaaatgtaaggactattcttcaaa 20544363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 6621115 - 6621207
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccct 109  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | || |||||  |||    ||||||||||||||| ||||||    
T  6621115 ataaaatgtgaggattttaaaa-catttaatgaaatgtagggactattcttcaaagggtcacaaaatgtaag----aattaaaaacatattgaaccct 6621207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 5029753 - 5029811
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagac 71  Q
    |||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  5029753 ataaaatgtgaggattt-aaaaacatttaatgaaatatagggactattcttcaaagagac 5029811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 27311049 - 27311104
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagag 69  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  27311049 aaaatgtaggaattttaaaaacatttaatgaaatgtagggactattctttaaagag 27311104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 28852784 - 28852692
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccc 108  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||| || |||  |||| |||||  ||||    ||||||||||||||||||||    
T  28852784 ataaaatgtgaggattttaaaaacatttaatgaaatgtagggagtattatttaaatggacacaaaatgtaagg----attaaaaacatatttaaccc 28852692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 44803620 - 44803687
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaaga 68  Q
    |||||||| | |||||||||| | ||||||||||||||||||||||||||| |||||||||| |||||    
T  44803620 tgataacggagataaaatgtgagaattttaaaaacatttaatgaaatgtagagactattctttaaaga 44803687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18152858 - 18152792
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||| ||||||||| |||||||||  ||||||||||||||||||||||||    
T  18152858 tgataacggagataaaatgtgaggattttaagaacatttaacaaaatgtagggactattcttcaaag 18152792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32092517 - 32092571
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggac 55  Q
    |||||||| | |||||||||| |||||||||||||||||||||||||||||||||    
T  32092517 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggac 32092571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 49053880 - 49053946
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaat 78  Q
    |||||| ||| ||||||||||||| |||||||||||||||||| |||| ||||||||||| ||||||    
T  49053880 ataaaacgtgaggattttaaaaacttttaatgaaatgtagggattatttttcaaagagacttaaaat 49053946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 27310136 - 27310087
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttc 63  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  27310136 aaaatgtagggattttaaaaacatttaatgaaatgtagggaccattcttc 27310087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 30939565 - 30939614
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttc 63  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  30939565 aaaatgtagggattttaaaaatatttaatgaaatgtagggactattcttc 30939614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28838454 - 28838399
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggact 56  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||| ||||||    
T  28838454 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtcgggact 28838399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 28854768 - 28854676
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccc 108  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||  | |  |||||| ||||    ||||||||||||||||||||    
T  28854768 ataaaatgtgaggattttaaaaacatttaataaaatgtagggagtattctttaaatgggcgcaaaatataagg----attaaaaacatatttaaccc 28854676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 10466778 - 10466873
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccctaa 111  Q
    ||||||||||  ||||||||||||||||||| |||| ||| |||||||||||||| ||||  |||||  || |    |||||||||||||||||||||||    
T  10466778 ataaaatgtgacgattttaaaaacatttaataaaatatagagactattcttcaaatagacgcaaaatgtaaag----attaaaaacatatttaaccctaa 10466873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 33848288 - 33848346
Alignment:
Q  4 taacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    ||||||||  ||||||| || |||||||||||||||| |||||||||||||||||||||    
T  33848288 taacgaatgaaaaatgtaggaattttaaaaacatttattgaaatgtagggactattctt 33848346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 1244444 - 1244491
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  1244444 aaaatgtagggattttaaaaacattcattgaaatgtagggactattct 1244491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 18443264 - 18443217
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  18443264 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattct 18443217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 18443618 - 18443657
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  18443618 gggattttaaaaacatttattgaaatgtagggactattct 18443657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 22954134 - 22954087
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||    
T  22954134 aaaatgtagggattttaaaaacatttattaaaatgtagggactattct 22954087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 28898117 - 28898070
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  28898117 aaaatgtagggattttaaaaacattcattgaaatgtagggactattct 28898070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 33847954 - 33847907
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  33847954 aaaatgtagggattttaaaaacatttattgaaatgtagagactattct 33847907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 41298677 - 41298724
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  41298677 aaaatgtagggattttaaaaacattcattgaaatgtagggactattct 41298724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11975051 - 11975117
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||| |||||||||||||||||||| ||| |||  ||||||| |||||||    
T  11975051 tgataacggaaataaaatgtgaggattttaaaaacatttaataaaacgtaaagactatttttcaaag 11975117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 16755634 - 16755687
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||| || |||||||||||| |||||||||||| ||| |||||||||||||||    
T  16755634 aaaatatgaggattttaaaaatatttaatgaaatatagagactattcttcaaag 16755687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 4152809 - 4152761
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    ||||||| ||||||||||||||||| ||| ||||||||||| |||||||    
T  4152809 aaaatgtagggattttaaaaacattcaataaaatgtagggattattctt 4152761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 12933058 - 12933155
Alignment:
Q  10 atataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccct 109  Q
    |||||||||||| |||||||| ||||||||| | |||| |||||||||||  ||||||  ||| |||||  | ||||    |||||||||||||||||||    
T  12933058 atataaaatgtgaggattttagaaacatttacttaaatatagggactatttatcaaaggaacacaaaatgtagggac----taaaaacatatttaaccct 12933153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 884771 - 884728
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggacta 57  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||    
T  884771 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 884728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 1244100 - 1244057
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggacta 57  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||    
T  1244100 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 1244057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 12908472 - 12908425
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    |||||||||| |||||||||||||||||| | ||||||||||| ||||    
T  12908472 ataaaatgtgaggattttaaaaacatttagttaaatgtagggattatt 12908425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 28898461 - 28898504
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggacta 57  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||    
T  28898461 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 28898504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 29784023 - 29783976
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| || |||||||||||||||| |||||| |||||||||||||    
T  29784023 aaaatgtaggaattttaaaaacatttattgaaatatagggactattct 29783976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 30938684 - 30938629
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagag 69  Q
    ||||||| || |||||||||||||||||| ||||||| ||| ||||||| ||||||    
T  30938684 aaaatgtaggaattttaaaaacatttaataaaatgtatggattattctttaaagag 30938629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 41298333 - 41298290
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggacta 57  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||    
T  41298333 aaaatgtagggattttaaaaacatttattgaaatgtaaggacta 41298290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 11992794 - 11992749
Alignment:
Q  23 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaga 68  Q
    |||||||||||||||| ||| |||||||||||| |||||| |||||    
T  11992794 ggattttaaaaacattaaataaaatgtagggacaattctttaaaga 11992749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 23548119 - 23548053
Alignment:
Q  38 ttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccc 108  Q
    ||||||||||||||||| |||||||||||||  |  |||||| ||||||    ||||||||||||||||||    
T  23548119 ttaatgaaatgtagggattattcttcaaagaagcgcaaaatataaggac----taaaaacatatttaaccc 23548053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23548995 - 23549060
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||| | ||||||| || |||||| ||||| |||||||||||| ||| || |||||||||||    
T  23548995 tgataacggaaataaaatttgaggatttcaaaaagatttaatgaaatatagagagtattcttcaaa 23549060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 10466695 - 10466651
Alignment:
Q  23 ggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||| |||||||||||| ||||||||| |||||||| |||||||    
T  10466695 ggattataaaaacatttattgaaatgtaaggactatttttcaaag 10466651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 17914288 - 17914185
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccctaa 111  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||  |||||  || |||    | |||||||||||||||||||    
T  17914288 ataaaatgtgaggattttaaaaacatttaataaaatgtagggactattcttcaaagagacgcaaaatgtaaagac----ttaaaacatatttaaccctaa 17914193  T
Q  112 tttctttc 119  Q
    ||| ||||    
T  17914192 tttatttc 17914185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6297850 - 6297916
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  6297850 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaag 6297916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6298023 - 6298089
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  6298023 tgataacggaaataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaag 6298089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 16662259 - 16662204
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  16662259 ataaaatgtgagaattttaaaaacatttaatgaaatgtagggactattcttcaaag 16662204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9800331 - 9800397
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||| |||||||||  ||||||||||||||||||||||||| || ||||||||||||||||    
T  9800331 tgataacgaagataaaatgtaaggattttaaaaacatttaatgaaatatatggactattcttcaaag 9800397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21006110 - 21006176
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  21006110 tgataacggagataaaatgtgaggattttaaaaacatttaataaaatgtagggactatttttcaaag 21006176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 6297551 - 6297498
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  6297551 aaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattcttcaaag 6297498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12489330 - 12489265
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    ||||||| || |||||||| | |||||||||||| |||||||||||||||||||||||||||||||    
T  12489330 tgataacaaagataaaatgcgaggattttaaaaatatttaatgaaatgtagggactattcttcaaa 12489265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 26720410 - 26720357
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  26720410 aaaatgtagggattttaaaaatatttaatgaaatgtagggactattcttcaaag 26720357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26997857 - 26997966
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||||| | |||||||||| |||||||||||| | ||||||||||||| |||||||||||||||  |||  |||||  |||    || ||||||||||    
T  26997857 tgataacggagataaaatgtgaggattttaaaaataattaatgaaatgtatggactattcttcaaatggacgcaaaatgtaag----aactaaaaacata 26997952  T
Q  101 tttaaccctaattt 114  Q
    ||||||||||||||    
T  26997953 tttaaccctaattt 26997966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 26243394 - 26243449
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  26243394 ataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaag 26243449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 9800141 - 9800038
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacata 100  Q
    |||||||| | || ||||||| |||||||||||||||||||| ||||||| ||| |||||||||||||| |  |||||  ||||||    ||||||||||    
T  9800141 tgataacggagatgaaatgtgaggattttaaaaacatttaataaaatgtaaggattattcttcaaagaggcgcaaaatctaaggac----taaaaacata 9800046  T
Q  101 tttaaccc 108  Q
    ||||||||    
T  9800045 tttaaccc 9800038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 13315293 - 13315243
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  13315293 ataaaatgtgatgattttaaaaacatttaatgaaatgtagggactattctt 13315243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10047580 - 10047516
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||| | |||||||||| | ||||||||||||||||||| ||||||||||||||||||||||    
T  10047580 tgataacggagataaaatgtgagaattttaaaaacatttaatg-aatgtagggactattcttcaaa 10047516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 29917193 - 29917146
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  29917193 aaaatgtagggattttaaaaacatttattgaaatgtagggactattct 29917146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 4624622 - 4624569
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||| ||||||||||||||||||| |||||||||  |||||||||||||||    
T  4624622 aaaatgtagggattttaaaaacatttattgaaatgtaaagactattcttcaaag 4624569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 16662483 - 16662524
Alignment:
Q  25 attttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  16662483 attttaaaaacatttaatgaaatgtaggaactattcttcaaa 16662524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7344844 - 7344932
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaa 89  Q
    |||||||| | ||||||| || ||||||||||||||| |||| ||||||| ||| |||||||||||| | || |||||  |||||||||    
T  7344844 tgataacggacataaaatatgaggattttaaaaacatataataaaatgtatggattattcttcaaaggggcacaaaatgtaaggactaa 7344932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 44148666 - 44148614
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||| ||||||||||||| |||| | |||||||||||||||||||||||    
T  44148666 aaaatgtgaggattttaaaaacgtttattaaaatgtagggactattcttcaaa 44148614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 29917539 - 29917586
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  29917539 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattct 29917586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 44024316 - 44024262
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    ||||||||||  ||||||||||||||||  ||||||||| |||||||||||||||    
T  44024316 ataaaatgtgatgattttaaaaacatttggtgaaatgtatggactattcttcaaa 44024262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 44803551 - 44803609
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    |||||| |||||||||||||| | ||||||||||| |||| | ||||||||||||||||    
T  44803551 tgataatgaatataaaatgtgagaattttaaaaacttttacttaaatgtagggactatt 44803609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 21005958 - 21006003
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||||    
T  21005958 gggattttaaaaacatttattgaaatgtaaggactatttttcaaag 21006003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 36155360 - 36155307
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||  |||||||||||||||||| | |||||||||||||||| |||||||    
T  36155360 aaaatgtaaggattttaaaaacatttattaaaatgtagggactattattcaaag 36155307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 4694434 - 4694478
Alignment:
Q  15 aaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||    
T  4694434 aaatgtagggattttaaaaacatttacttaaatgtagggactatt 4694478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 12489526 - 12489577
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttca 64  Q
    |||||||||  |||||||||||||||| ||||||||||| |||||||||||||    
T  12489526 ataaaatgtaaggattttaaaaacatt-aatgaaatgtaaggactattcttca 12489577  T

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Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 12734261 - 12734214
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||| ||| | ||||||||||||||||||||    
T  12734261 aaaatgtagggattttaaaaatattcattgaaatgtagggactattct 12734214  T

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Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 17915506 - 17915560
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||||| |||||| ||||||||||||| ||||||| ||| ||||||||||||    
T  17915506 ataaaatgtgaggatttaaaaaacatttaataaaatgtaagga-tattcttcaaag 17915560  T

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Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 20682787 - 20682744
Alignment:
Q  24 gattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||    
T  20682787 gattttaaaaacatttattaaaatgtaaggactattcttcaaag 20682744  T

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Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 11089133 - 11089187
Alignment:
Q  24 gattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaat 78  Q
    ||||||||||||||||| ||||||||| | |||||| |||||||  |||||||||    
T  11089133 gattttaaaaacatttattgaaatgtaagaactatttttcaaagtcacataaaat 11089187  T

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Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 36156358 - 36156451
Alignment:
Q  13 taaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaaccct 109  Q
    ||||||||  |||||||||||||||||| ||||||| |  ||||||| |||||||   ||||||||| |||||   |  ||||||||||||||||||    
T  36156358 taaaatgtaaggattttaaaaacatttattgaaatgcaaagactattattcaaagtcgcataaaatataagga---accaaaaacatatttaaccct 36156451  T

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Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 40304777 - 40304728
Alignment:
Q  10 atataaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    |||||||||||| |||||||||||| ||||| | ||||||| ||||||||    
T  40304777 atataaaatgtgaggattttaaaaatatttacttaaatgtatggactatt 40304728  T

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Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 44024479 - 44024434
Alignment:
Q  22 gggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    ||||||||||||| ||||| ||||||||| |||||||| |||||||    
T  44024479 gggattttaaaaatatttattgaaatgtaaggactatttttcaaag 44024434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 4624449 - 4624413
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgta 50  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  4624449 aaaatgtagggattttaaaaacatttattgaaatgta 4624413  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 12734605 - 12734641
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgta 50  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  12734605 aaaatgtagggattttaaaaacatttattgaaatgta 12734641  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 20682925 - 20682973
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattctt 62  Q
    ||||||||| ||||||||||||||||| | ||||||| |||| ||||||    
T  20682925 aaaatgtggagattttaaaaacatttattaaaatgtaaggaccattctt 20682973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 22601576 - 22601540
Alignment:
Q  25 attttaaaaacatttaatgaaatgtagggactattct 61  Q
    |||||||||||||||| | ||||||||||||||||||    
T  22601576 attttaaaaacatttatttaaatgtagggactattct 22601540  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 24846040 - 24846004
Alignment:
Q  25 attttaaaaacatttaatgaaatgtagggactattct 61  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  24846040 attttaaaaacatttattgaaatgtaaggactattct 24846004  T

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Target: scaffold0009 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 107824 - 107758
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaag 67  Q
    |||||||| | |||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  107824 tgataacggagataaaatgtgaggattttaaaaatatttattgaaatgtagggactattcttcaaag 107758  T

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Target: scaffold0009; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 108110 - 108175
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    |||||||| | |||||||||| |||||||||||||||||||||||||||||| |  ||||||||||    
T  108110 tgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaggaataattcttcaaa 108175  T

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Target: scaffold0009; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 107974 - 107932
Alignment:
Q  24 gattttaaaaacatttaatgaaatgtagggactattcttcaaa 66  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||    
T  107974 gattttaaaaacatttattgaaatgtaaggactatttttcaaa 107932  T

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Target: scaffold0063 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 35191 - 35281
Alignment:
Q  12 ataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaattaaaaacatatttaac 106  Q
    |||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||| |||  |||||  |||||||||    |||||||||||||    
T  35191 ataaaatgtgaggattttaaaaacattcaataaaatgtagagactattcttcaaagggacgcaaaatgtaaggactaa----aaacatatttaac 35281  T

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Target: scaffold0063; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34894 - 34806
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacataaaatacaaggactaa 89  Q
    |||||||| | |||||||||| | | |||||||||||||||||||||||| |||| ||| |||||| ||||  |||||| |||||||||    
T  34894 tgataacggagataaaatgtgagtactttaaaaacatttaatgaaatgtatggaccattattcaaatagacgcaaaatataaggactaa 34806  T

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Target: scaffold0148 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 32985 - 33040
Alignment:
Q  4 taacgaatataaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||| ||| ||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  32985 taacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 33040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 29363 - 29318
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactatt 59  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  29363 aaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 29318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 39509 - 39462
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  39509 aaaatgtagggattttaaaaacatttattgaaatgtagggattattct 39462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 39853 - 39900
Alignment:
Q  14 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattct 61  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||    
T  39853 aaaatgtaaggattttaaaaacatttattgaaatgtagggactattct 39900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0933 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 593 - 544
Alignment:
Q  1 tgataacgaatataaaatgtggggattttaaaaacatttaatgaaatgta 50  Q
    ||||||| || ||||||||||   ||||||||||||||||||||||||||    
T  593 tgataacaaaaataaaatgtgaaaattttaaaaacatttaatgaaatgta 544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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