View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9612_low_36 (Length: 362)
Name: NF9612_low_36
Description: NF9612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9612_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 47680619 - 47680932
Alignment:
| Q |
1 |
acctacatgcagtgacagcaaggcatggggggctaccctaaag---------gatggaaaagacaggattcgaatttttaaacacagaaaccaattgtgt |
91 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47680619 |
acctacatgcagtgacagcaaggcatggggggctaccctaaagaaaagcaaggatggaaaagacaggattcgaatttttaaacacagaaaccaattgtgt |
47680718 |
T |
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| Q |
92 |
tgtgacaccctaaccacccatcatgtttgaaaaaccgagacacaaaccaattgcgtttattagggtttgactcaattcattgatgatcatcaatactata |
191 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
47680719 |
tgtgacaccctaaccacccatcatgtttgaaaaaccgagacacaaaccaattgcgtttattagggtttgactcaattcattgatgatcatcaatac--ta |
47680816 |
T |
|
| Q |
192 |
caacaataatggattttttggcgatagtgtataatgtagctattactttgtacatccatgtatatttggtagtatatggtattgcatttatatttggaat |
291 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
47680817 |
caacaataatggattttttggcgatagtgtataatgtagctattactttgtacatccatgtataattggtagtatatggtattgcatttatatttggaat |
47680916 |
T |
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| Q |
292 |
taatgatacatattat |
307 |
Q |
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|||||||||||||||| |
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| T |
47680917 |
taatgatacatattat |
47680932 |
T |
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