View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9612_low_38 (Length: 346)

Name: NF9612_low_38
Description: NF9612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9612_low_38
NF9612_low_38
[»] chr7 (20 HSPs)
chr7 (150-318)||(22245648-22245816)
chr7 (1-145)||(22244933-22245077)
chr7 (2-145)||(23610118-23610260)
chr7 (211-315)||(8779870-8779973)
chr7 (211-331)||(8786709-8786828)
chr7 (234-315)||(4460240-4460322)
chr7 (163-227)||(15706623-15706685)
chr7 (193-297)||(48804528-48804632)
chr7 (231-298)||(39271738-39271805)
chr7 (220-309)||(4465218-4465305)
chr7 (231-297)||(12199774-12199840)
chr7 (251-315)||(4541729-4541794)
chr7 (274-318)||(8837126-8837169)
chr7 (229-315)||(11483298-11483383)
chr7 (170-264)||(17205939-17206030)
chr7 (251-307)||(17912155-17912211)
chr7 (203-291)||(25180617-25180705)
chr7 (164-264)||(13435462-13435556)
chr7 (255-315)||(4982619-4982680)
chr7 (251-307)||(30063424-30063480)
[»] chr6 (34 HSPs)
chr6 (163-300)||(25949900-25950037)
chr6 (168-300)||(25964494-25964632)
chr6 (168-300)||(25969141-25969279)
chr6 (168-300)||(25973581-25973719)
chr6 (211-331)||(26018505-26018624)
chr6 (163-227)||(17744102-17744166)
chr6 (211-331)||(26139209-26139328)
chr6 (203-297)||(17283443-17283537)
chr6 (167-307)||(14894001-14894139)
chr6 (251-331)||(26157878-26157957)
chr6 (253-321)||(29094098-29094168)
chr6 (251-315)||(19695972-19696037)
chr6 (273-318)||(19994157-19994202)
chr6 (251-336)||(20217940-20218024)
chr6 (251-336)||(22111965-22112049)
chr6 (163-227)||(4188807-4188870)
chr6 (231-307)||(15172794-15172869)
chr6 (163-227)||(19074705-19074768)
chr6 (231-331)||(25338675-25338775)
chr6 (167-297)||(24512169-24512297)
chr6 (251-309)||(26822425-26822483)
chr6 (234-331)||(25922827-25922924)
chr6 (233-298)||(26474531-26474596)
chr6 (251-331)||(25508136-25508215)
chr6 (219-297)||(18233244-18233322)
chr6 (167-241)||(19569539-19569611)
chr6 (274-331)||(18627978-18628036)
chr6 (163-217)||(23492974-23493027)
chr6 (163-200)||(18449443-18449480)
chr6 (251-315)||(23346639-23346704)
chr6 (274-318)||(23523427-23523472)
chr6 (219-307)||(24392324-24392410)
chr6 (254-307)||(25030598-25030651)
chr6 (274-331)||(29254530-29254586)
[»] chr3 (22 HSPs)
chr3 (163-317)||(17051294-17051447)
chr3 (167-297)||(2722537-2722668)
chr3 (163-227)||(3244438-3244502)
chr3 (163-241)||(47975443-47975522)
chr3 (163-225)||(3249569-3249631)
chr3 (216-297)||(16034677-16034759)
chr3 (163-226)||(1991480-1991543)
chr3 (163-227)||(10607640-10607703)
chr3 (163-227)||(16384814-16384878)
chr3 (231-309)||(11826856-11826932)
chr3 (273-331)||(13418937-13418995)
chr3 (163-217)||(26169643-26169696)
chr3 (163-200)||(10601328-10601365)
chr3 (220-307)||(11577184-11577269)
chr3 (219-297)||(34053020-34053099)
chr3 (254-315)||(8685311-8685373)
chr3 (231-307)||(11848314-11848388)
chr3 (278-331)||(17210131-17210183)
chr3 (274-331)||(22039383-22039440)
chr3 (167-270)||(36079674-36079772)
chr3 (231-321)||(27407769-27407858)
chr3 (167-241)||(42243920-42243993)
[»] chr2 (13 HSPs)
chr2 (163-270)||(23341173-23341279)
chr2 (163-227)||(20282776-20282840)
chr2 (254-321)||(21344000-21344068)
chr2 (224-307)||(16440345-16440428)
chr2 (231-315)||(21131502-21131587)
chr2 (254-321)||(23704835-23704903)
chr2 (231-321)||(20851-20939)
chr2 (231-285)||(28496270-28496324)
chr2 (232-336)||(29576790-29576896)
chr2 (251-315)||(19012473-19012537)
chr2 (274-331)||(24365804-24365861)
chr2 (251-307)||(24322366-24322422)
chr2 (167-238)||(32440778-32440847)
[»] scaffold0360 (1 HSPs)
scaffold0360 (163-243)||(5487-5567)
[»] chr4 (13 HSPs)
chr4 (167-321)||(11902001-11902155)
chr4 (231-321)||(10731691-10731780)
chr4 (231-321)||(10945460-10945549)
chr4 (163-227)||(11048920-11048984)
chr4 (224-307)||(8561753-8561836)
chr4 (273-318)||(9192801-9192846)
chr4 (251-315)||(11921907-11921972)
chr4 (163-227)||(40559949-40560012)
chr4 (167-241)||(10731824-10731896)
chr4 (167-241)||(10945593-10945665)
chr4 (251-309)||(5676038-5676096)
chr4 (231-285)||(7197831-7197885)
chr4 (232-309)||(25190753-25190828)
[»] scaffold0175 (1 HSPs)
scaffold0175 (163-227)||(11981-12045)
[»] chr8 (10 HSPs)
chr8 (167-297)||(15760162-15760290)
chr8 (163-227)||(33633100-33633163)
chr8 (167-297)||(25397534-25397662)
chr8 (231-297)||(22285577-22285643)
chr8 (251-315)||(18008665-18008730)
chr8 (163-217)||(23694436-23694488)
chr8 (163-244)||(14877701-14877779)
chr8 (251-331)||(21319970-21320052)
chr8 (231-297)||(42417935-42418001)
chr8 (167-227)||(18959829-18959887)
[»] scaffold0197 (1 HSPs)
scaffold0197 (167-296)||(8210-8332)
[»] chr5 (12 HSPs)
chr5 (163-244)||(20915363-20915444)
chr5 (163-227)||(25577011-25577074)
chr5 (163-227)||(34780974-34781037)
chr5 (231-315)||(12411089-12411174)
chr5 (251-315)||(16677640-16677705)
chr5 (224-297)||(20167624-20167697)
chr5 (273-318)||(20738902-20738947)
chr5 (231-298)||(21382859-21382926)
chr5 (219-297)||(21999945-22000024)
chr5 (163-200)||(20968407-20968444)
chr5 (233-270)||(23435933-23435970)
chr5 (233-270)||(23447300-23447337)
[»] scaffold0713 (1 HSPs)
scaffold0713 (211-318)||(6128-6234)
[»] chr1 (18 HSPs)
chr1 (163-227)||(17987221-17987285)
chr1 (167-309)||(21240636-21240778)
chr1 (163-227)||(18379595-18379659)
chr1 (163-226)||(41228946-41229008)
chr1 (171-298)||(41802853-41802973)
chr1 (219-291)||(39286041-39286114)
chr1 (167-227)||(23289364-23289423)
chr1 (167-297)||(17717344-17717472)
chr1 (223-296)||(8649471-8649545)
chr1 (274-331)||(49056014-49056072)
chr1 (163-227)||(44538852-44538914)
chr1 (163-227)||(20405365-20405428)
chr1 (167-238)||(20412893-20412962)
chr1 (231-298)||(28208464-28208531)
chr1 (251-315)||(20498118-20498183)
chr1 (251-315)||(20860157-20860222)
chr1 (254-307)||(23299459-23299512)
chr1 (251-315)||(25404542-25404607)
[»] scaffold0142 (1 HSPs)
scaffold0142 (163-227)||(24621-24684)
[»] scaffold0046 (1 HSPs)
scaffold0046 (163-227)||(21121-21184)
[»] scaffold0022 (1 HSPs)
scaffold0022 (163-227)||(53461-53524)
[»] scaffold0450 (1 HSPs)
scaffold0450 (163-227)||(79-142)
[»] scaffold0093 (1 HSPs)
scaffold0093 (163-227)||(27660-27723)
[»] scaffold0081 (1 HSPs)
scaffold0081 (167-227)||(51133-51192)
[»] scaffold0021 (2 HSPs)
scaffold0021 (163-227)||(13701-13764)
scaffold0021 (193-331)||(100753-100886)
[»] scaffold0168 (1 HSPs)
scaffold0168 (219-297)||(8261-8340)
[»] scaffold0031 (1 HSPs)
scaffold0031 (219-297)||(23853-23932)
[»] scaffold0251 (1 HSPs)
scaffold0251 (163-200)||(18294-18331)
[»] scaffold0125 (1 HSPs)
scaffold0125 (163-200)||(43335-43372)
[»] scaffold0001 (2 HSPs)
scaffold0001 (248-315)||(521313-521381)
scaffold0001 (163-227)||(182055-182118)
[»] scaffold0098 (1 HSPs)
scaffold0098 (224-298)||(43743-43817)
[»] scaffold0443 (1 HSPs)
scaffold0443 (231-315)||(3905-3990)
[»] scaffold0362 (1 HSPs)
scaffold0362 (222-331)||(8655-8763)
[»] scaffold0213 (1 HSPs)
scaffold0213 (167-200)||(15940-15973)
[»] scaffold0123 (1 HSPs)
scaffold0123 (251-315)||(14644-14709)
[»] scaffold0074 (1 HSPs)
scaffold0074 (219-307)||(22169-22255)
[»] scaffold0049 (1 HSPs)
scaffold0049 (219-307)||(31687-31773)


Alignment Details
Target: chr7 (Bit Score: 165; Significance: 3e-88; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 150 - 318
Target Start/End: Original strand, 22245648 - 22245816
Alignment:
Q  150 gcaaatgctactattttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgc 249  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22245648 gcaaatgctactattttaataatgattagatgaaagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgc 22245747  T
Q  250 tttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaactttatatt 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22245748 tttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaactttatatt 22245816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22244933 - 22245077
Alignment:
Q  1 tcctcattacattctgtttaaaacataaacacccaagcaataaataagctattccaagaattgagcaatgaatctcaaaatgaaaatcaagggattcatt 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22244933 tcctcattacattctgtttacaacataaacacccaagcaataaataagctattccaagaattgagcaatgaatctcaaaatgaaaatcaagggattcatt 22245032  T
Q  101 tcatcatatttctcaaccaaaaatatgagacgcaatatatttaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  22245033 tcatcatatttctcaaccaaaaatatgagacgcaatatatttaaa 22245077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 23610118 - 23610260
Alignment:
Q  2 cctcattacattctgtttaaaacataaacacccaagcaataaataagctattccaagaattgagcaatgaatctcaaaatgaaaatcaagggattcattt 101  Q
    |||||||| |||||||||| ||||||||||| ||||| |||||||| ||| | |||| |||||| ||  | |||||||||||||| |||| |||| ||||    
T  23610118 cctcattagattctgtttacaacataaacactcaagctataaataaactactacaagtattgagtaagaattctcaaaatgaaaaccaagtgatt-attt 23610216  T
Q  102 catcatatttctcaaccaaaaatatgagacgcaatatatttaaa 145  Q
     ||||||||||||||| || |||||||||  ||||||| |||||    
T  23610217 tatcatatttctcaactaagaatatgagatacaatatacttaaa 23610260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 315
Target Start/End: Original strand, 8779870 - 8779973
Alignment:
Q  211 tttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaac 310  Q
    ||||||| ||||||||| |||||||||| | ||  | || |||||||||||||| | ||| | | ||||||||||| |||| ||||||||||||||||||    
T  8779870 tttaattaaaagaaaataacaataataaaataaaagcgccttgggattattggttcatcataataacaaacccttcacaaa-caaaccctaaacctaaac 8779968  T
Q  311 tttat 315  Q
    |||||    
T  8779969 tttat 8779973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 331
Target Start/End: Original strand, 8786709 - 8786828
Alignment:
Q  211 tttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaac 310  Q
    ||||||| ||||||||| |||||||||| | ||  | || ||| |||||||||| | ||| | | ||||||||||| |||| ||||||||||||||||||    
T  8786709 tttaattaaaagaaaataacaataataaaataaaagcgccttgagattattggttcatcataataacaaacccttcacaaa-caaaccctaaacctaaac 8786807  T
Q  311 tttatattagagcaactttct 331  Q
    |||||||| || | |||||||    
T  8786808 tttatatttgacctactttct 8786828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 315
Target Start/End: Original strand, 4460240 - 4460322
Alignment:
Q  234 aataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    |||||||||| ||||| |||||||||||||| |||||  |||||||| ||||| |||| |||||| |||||||| ||||||||    
T  4460240 aataataaaaaggtgccttgggattattggttcgtcatggtgacaaatccttcacaaaccaaaccttaaacctagaactttat 4460322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 15706623 - 15706685
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| |||||||||||||  |||| ||| |||||||||| |||||||||    
T  15706623 ttttaataatgattagatgaaagtttcaaaggtt--aaaagttggatttttaattaaaagaaaat 15706685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 297
Target Start/End: Complemental strand, 48804632 - 48804528
Alignment:
Q  193 ggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaat 292  Q
    ||||| ||| |||| ||||||||  ||| |||||| ||||||||||||||| || || || ||||||||||| | ||| | ||||||||||||| ||||     
T  48804632 ggttataaagtttggatttttaacagaatgaaaataacaataataataaaaaggcgccttcggattattggtacatcataatgacaaacccttcacaaac 48804533  T
Q  293 caaac 297  Q
    |||||    
T  48804532 caaac 48804528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 298
Target Start/End: Complemental strand, 39271805 - 39271738
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaacc 298  Q
    |||||||||||||| | || ||||||||||||||||||||  | |||||||||||| |||| ||||||    
T  39271805 aataataataaaagagagccttgggattattggtccgtcatggcgacaaacccttcacaaaccaaacc 39271738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 4465218 - 4465305
Alignment:
Q  220 aagaaaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaa 309  Q
    |||||||| |||||||||||||||| ||   | ||||||||| || |||||  |||||||| ||||| |||| |||||||||||||||||    
T  4465218 aagaaaataacaataataataaaagcgtc--tagggattattagttcgtcatggtgacaaatccttcacaaaccaaaccctaaacctaaa 4465305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 12199840 - 12199774
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaac 297  Q
    |||||||||||||| | || ||||||| ||||||||||||  |||||||||||||| |||| |||||    
T  12199840 aataataataaaagagagccttgggatcattggtccgtcacggtgacaaacccttcacaaaccaaac 12199774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 4541794 - 4541729
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    |||||||||||||| |||||  |||||||| ||||| |||| ||||||||||||||| ||||||||    
T  4541794 ttgggattattggttcgtcatggtgacaaatccttcacaaaccaaaccctaaacctagaactttat 4541729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 8837169 - 8837126
Alignment:
Q  274 tgacaaacccttctcaaatcaaaccctaaacctaaactttatatt 318  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||    
T  8837169 tgacaaacccttcacaaa-caaaccctaaacctaaactttatatt 8837126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 11483298 - 11483383
Alignment:
Q  229 acaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    |||||||||||||||| |  | || ||||||||||||| |||  |||||||||||| | |||| ||||||||||||||| ||||||||    
T  11483298 acaataataataaaagcg--ccttaggattattggtccatcatggtgacaaaccctacacaaaccaaaccctaaacctagaactttat 11483383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 17205939 - 17206030
Alignment:
Q  170 aatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattggt 264  Q
    |||| |||||||||||||| |   |||||||| |||| ||||||| |||||  ||||| |||||| |||||||| ||||  ||||||||||||||    
T  17205939 aatggttagatgagagtttaa---gttaaaaagtttggatttttatttgaattaaaataacaatagtaataaaaaggtgtcttgggattattggt 17206030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 17912211 - 17912155
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta 307  Q
    |||||||||||||| |||||  |||||||| ||||| |||| |||||||||||||||    
T  17912211 ttgggattattggttcgtcatggtgacaaatccttcacaaaccaaaccctaaaccta 17912155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 291
Target Start/End: Original strand, 25180617 - 25180705
Alignment:
Q  203 tttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaa 291  Q
    |||||||||||||  ||| |||||| ||||||||||||||| ||||  ||||||| |||||||| | |  |||||||| ||||| ||||    
T  25180617 tttgaatttttaacagaatgaaaataacaataataataaaaaggtgtcttgggatcattggtccattatggtgacaaatccttcacaaa 25180705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 164 - 264
Target Start/End: Complemental strand, 13435556 - 13435462
Alignment:
Q  164 tttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattgg 263  Q
    |||||||||||||||||||||||||   || ||| ||| |||| | |||||||| |||||||||   ||||||||||||| || || |||||||||||||    
T  13435556 tttaataatgattagatgagagttt--gagattataaagtttggaattttaattaaaagaaaat---aataataataaaa-ggagccttgggattattgg 13435463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 4982619 - 4982680
Alignment:
Q  255 gattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    ||||||||||  ||||  |||||||||||||| |||| ||||||||||||||| ||||||||    
T  4982619 gattattggtttgtcatggtgacaaacccttcacaaaccaaaccctaaacctagaactttat 4982680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 30063424 - 30063480
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta 307  Q
    |||||||||||||| |||||  |||||||| |||||  ||| |||||||||||||||    
T  30063424 ttgggattattggttcgtcatggtgacaaatccttcagaaaccaaaccctaaaccta 30063480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 300
Target Start/End: Complemental strand, 25950037 - 25949900
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattg 262  Q
    |||||||| ||||||||||| ||||||||| |||||||| |||| |||||||||  ||||||||| ||||||||||||||||||||  ||||||||||||    
T  25950037 ttttaatactgattagatgaaagtttcaaacgttaaaaagtttggatttttaatcaaaagaaaataacaataataataaaagggtgtcttgggattattg 25949938  T
Q  263 gtccgtcaaagtgacaaacccttctcaaatcaaaccct 300  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  25949937 gtccgtcaaagtgacaaacccttctcaatccaaaccct 25949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 168 - 300
Target Start/End: Complemental strand, 25964632 - 25964494
Alignment:
Q  168 ataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataa------aagggtgctttgggattatt 261  Q
    ||||||||||||||| ||||||||| |||||||| |||| ||||||||||||||||||||  ||||||||||||      ||||||||  ||||||||||    
T  25964632 ataatgattagatgaaagtttcaaaagttaaaaagtttggatttttaattgaaagaaaataccaataataataataataaaagggtgccctgggattatt 25964533  T
Q  262 ggtccgtcaaagtgacaaacccttctcaaatcaaaccct 300  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  25964532 ggtccgtcaaagtgacaaacccttctcaatccaaaccct 25964494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 168 - 300
Target Start/End: Complemental strand, 25969279 - 25969141
Alignment:
Q  168 ataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataa------aagggtgctttgggattatt 261  Q
    ||||||||||||||| ||||||||| |||||||| |||| ||||||||||||||||||||  ||||||||||||      ||||||||  ||||||||||    
T  25969279 ataatgattagatgaaagtttcaaaagttaaaaagtttggatttttaattgaaagaaaataccaataataataataataaaagggtgccctgggattatt 25969180  T
Q  262 ggtccgtcaaagtgacaaacccttctcaaatcaaaccct 300  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  25969179 ggtccgtcaaagtgacaaacccttctcaatccaaaccct 25969141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 168 - 300
Target Start/End: Complemental strand, 25973719 - 25973581
Alignment:
Q  168 ataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataa------aagggtgctttgggattatt 261  Q
    ||||||||||||||| ||||||||| |||||||| |||| ||||||||||||||||||||  ||||||||||||      ||||||||  ||||||||||    
T  25973719 ataatgattagatgaaagtttcaaaagttaaaaagtttggatttttaattgaaagaaaataccaataataataataataaaagggtgccctgggattatt 25973620  T
Q  262 ggtccgtcaaagtgacaaacccttctcaaatcaaaccct 300  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  25973619 ggtccgtcaaagtgacaaacccttctcaatccaaaccct 25973581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 331
Target Start/End: Complemental strand, 26018624 - 26018505
Alignment:
Q  211 tttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaac 310  Q
    ||||||| ||||||||| |||||||||| | ||  | || |||||||||||||| ||||| ||||||||  ||||| |||| ||||||||||||||||||    
T  26018624 tttaattaaaagaaaataacaataataaaataaaagcgccttgggattattggttcgtcatagtgacaattccttcacaaa-caaaccctaaacctaaac 26018526  T
Q  311 tttatattagagcaactttct 331  Q
    |||||||| || | |||||||    
T  26018525 tttatattggacctactttct 26018505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 17744166 - 17744102
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| | |||||||||||||||| |||| |||||||||| |||||||||    
T  17744166 ttttaataatgattagatgaaaatttcaaaggttaaaaagtttggatttttaattaaaagaaaat 17744102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 331
Target Start/End: Complemental strand, 26139328 - 26139209
Alignment:
Q  211 tttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaac 310  Q
    ||||||| ||||||||| | |||||||| | ||  | || |||||||||||||| ||||| ||||||||  ||||| |||| ||||||||||||||||||    
T  26139328 tttaattaaaagaaaataataataataaaataatagcgccttgggattattggttcgtcatagtgacaattccttcacaaa-caaaccctaaacctaaac 26139230  T
Q  311 tttatattagagcaactttct 331  Q
    |||||||| || | |||||||    
T  26139229 tttatattggacctactttct 26139209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 297
Target Start/End: Original strand, 17283443 - 17283537
Alignment:
Q  203 tttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaac 297  Q
    |||| ||||||||  ||| | |||| ||||||||||||||| ||||| |||||||||||||| ||||| | ||||||||||||| |||| |||||    
T  17283443 tttggatttttaaccgaatgtaaataacaataataataaaaaggtgcattgggattattggttcgtcataatgacaaacccttcacaaaccaaac 17283537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 167 - 307
Target Start/End: Complemental strand, 14894139 - 14894001
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtcc 266  Q
    |||||||||||||||| ||||| | |  ||||||| |||| ||||| ||||||| |||||| | ||||||||||| |  | || |||||||||||||| |    
T  14894139 aataatgattagatgaaagtttgaga--ttaaaaagtttggattttcaattgaatgaaaataataataataataataaagcgccttgggattattggttc 14894042  T
Q  267 gtcaaagtgacaaacccttctcaaatcaaaccctaaaccta 307  Q
     |||  |||||||| ||||| || | |||||||||||||||    
T  14894041 atcatggtgacaaatccttcacataccaaaccctaaaccta 14894001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 26157957 - 26157878
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaactttatattagagcaactttct 331  Q
    |||||||||||||| ||||| ||||||||  ||||| |||| |||||||||||||||||||||||||| || | |||||||    
T  26157957 ttgggattattggttcgtcatagtgacaattccttcacaaa-caaaccctaaacctaaactttatattggacctactttct 26157878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 29094168 - 29094098
Alignment:
Q  253 gggattattggtccgtcaaagtgacaaacccttctc-aaatcaaaccctaaacct-aaactttatattaga 321  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||| ||||||| ||||||||| |||||    
T  29094168 gggattattggtccgtcatggtgacaaacccttctcaaaatcaaaccttaaacctaaaactttatgttaga 29094098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 19696037 - 19695972
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    |||||||||||||| |||||  |||||||| ||||| |||||||||||||||||||| ||||||||    
T  19696037 ttgggattattggttcgtcatggtgacaaatccttcacaaatcaaaccctaaacctagaactttat 19695972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 318
Target Start/End: Complemental strand, 19994202 - 19994157
Alignment:
Q  273 gtgacaaacccttctcaaatcaaaccctaaacctaaactttatatt 318  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||    
T  19994202 gtgacaaacccttcacaaaacaaaccctaaacctaaactttatatt 19994157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 336
Target Start/End: Original strand, 20217940 - 20218024
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaactttatattagagcaactttctgatga 336  Q
    |||||||||||||| | ||| | | ||||||||||| |||| |||||||||||||||||||||||||| || | ||||||| ||||    
T  20217940 ttgggattattggttcatcataataacaaacccttcacaaa-caaaccctaaacctaaactttatatttgacctactttctaatga 20218024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 336
Target Start/End: Original strand, 22111965 - 22112049
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaactttatattagagcaactttctgatga 336  Q
    |||||||||||||| | ||| | | ||||||||||| |||| |||||||||||||||||||||||||| || | ||||||| ||||    
T  22111965 ttgggattattggttcatcataataacaaacccttcacaaa-caaaccctaaacctaaactttatatttgacctactttctaatga 22112049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 4188870 - 4188807
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| ||||||||||||| |||| |||| ||||||||||  ||||||||    
T  4188870 ttttaataatgattagatgaaagtttcaaaggtt-aaaagtttggatttttaattataagaaaat 4188807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 15172869 - 15172794
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta 307  Q
    ||||||||||||| |  ||||||||||||||||| |||||  |||||||| ||||| |||| |||||||||||||||    
T  15172869 aataataataaaaagc-gctttgggattattggttcgtcatggtgacaaatccttcacaaaccaaaccctaaaccta 15172794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 19074705 - 19074768
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| ||||||||||||| |||| |||| ||||||||||  ||||||||    
T  19074705 ttttaataatgattagatgaaagtttcaaaggtt-aaaagtttggatttttaattataagaaaat 19074768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 331
Target Start/End: Original strand, 25338675 - 25338775
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaactttatattagagcaactttc 330  Q
    ||||||||||||| || || |||||||||||| | | ||  | ||||||||||||| ||   |||||||||||||||||||||||||| || | ||||||    
T  25338675 aataataataaaaaggcgccttgggattattgattcatcttaatgacaaacccttcacatcccaaaccctaaacctaaactttatattggacccactttc 25338774  T
Q  331 t 331  Q
    |    
T  25338775 t 25338775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 297
Target Start/End: Complemental strand, 24512297 - 24512169
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtcc 266  Q
    |||||||||||||||||||||| | |  ||| ||| |||  |||||||| |||| |||| | ||||||||||||||| || || ||| ||||||||||      
T  24512297 aataatgattagatgagagtttgaga--ttataaagttttgatttttaactgaatgaaattaacaataataataaaaaggcgccttgagattattggttt 24512200  T
Q  267 gtcaaagtgacaaacccttctcaaatcaaac 297  Q
    |||| | |||||||||| || |||| |||||    
T  24512199 gtcataatgacaaacccatcacaaaccaaac 24512169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 26822483 - 26822425
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaa 309  Q
    |||||||||||||| |||||  |||||||||||||| |||| |||||| ||||||||||    
T  26822483 ttgggattattggttcgtcatggtgacaaacccttcacaaaccaaaccttaaacctaaa 26822425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 331
Target Start/End: Original strand, 25922827 - 25922924
Alignment:
Q  234 aataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaactttatattagagcaactttct 331  Q
    ||||||||||| | || ||| |||||||||| | ||   |||||||| |||||  ||| |||||||||||||||||||||||||| || | |||||||    
T  25922827 aataataaaagagcgccttgagattattggttcatcttggtgacaaatccttcataaaccaaaccctaaacctaaactttatattggacctactttct 25922924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 298
Target Start/End: Complemental strand, 26474596 - 26474531
Alignment:
Q  233 taataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaacc 298  Q
    |||||||||||| | |||||||||||||||||||||||| | |||||| | ||| |||| ||||||    
T  26474596 taataataaaagagagctttgggattattggtccgtcaaggagacaaatctttcacaaaccaaacc 26474531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 25508215 - 25508136
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaactttatattagagcaactttct 331  Q
    |||||||||||||| | ||| ||||||||  ||||| |||| |||||||||||||| ||||||||||| || | |||||||    
T  25508215 ttgggattattggttcctcatagtgacaattccttcacaaa-caaaccctaaaccttaactttatattggacctactttct 25508136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 18233244 - 18233322
Alignment:
Q  219 aaagaaaattacaataataataaaag-ggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaac 297  Q
    ||||||||| |||||||||| ||||| ||||  |||||||||||||||| ||| ||||| ||||||||| |||| |||||    
T  18233244 aaagaaaataacaataataacaaaagaggtgtcttgggattattggtccatcatagtga-aaacccttcacaaaccaaac 18233322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 19569539 - 19569611
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataa 241  Q
    |||||||||||||||||||||| | |  ||| ||| |||| |||||||||| ||||||||| | |||||||||||    
T  19569539 aataatgattagatgagagtttgaga--ttataaagtttggatttttaattaaaagaaaataataataataataa 19569611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 331
Target Start/End: Complemental strand, 18628036 - 18627978
Alignment:
Q  274 tgacaaacccttctcaaatcaaaccctaaaccta-aactttatattagagcaactttct 331  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||| || | |||||||    
T  18628036 tgacaaacccttcacaaaccaaaccctaaacctagaactttatattggatctactttct 18627978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 23493027 - 23492974
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaatt 217  Q
    |||||| ||||||||||||| ||||||||||||| |||| |||| ||||||||||    
T  23493027 ttttaaaaatgattagatgaaagtttcaaaggtt-aaaagtttggatttttaatt 23492974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 18449480 - 18449443
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaa 200  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  18449480 ttttaataatgattagatgaaggtttcaaaggttaaaa 18449443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 315
Target Start/End: Original strand, 23346639 - 23346704
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    ||||||||| |||| |||||  |||||||| ||||| |||| ||||||||||||||| ||||||||    
T  23346639 ttgggattactggttcgtcatggtgacaaatccttcacaaaccaaaccctaaacctataactttat 23346704  T

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Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 318
Target Start/End: Original strand, 23523427 - 23523472
Alignment:
Q  274 tgacaaacccttctcaaatcaaaccctaaaccta-aactttatatt 318  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||    
T  23523427 tgacaaacccttcacaaaccaaaccctaaacctagaactttatatt 23523472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 24392324 - 24392410
Alignment:
Q  219 aaagaaaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta 307  Q
    ||||||||| |||||||||||||||| |  | || |||||| | || |||||  |||||||| ||||| |||| |||||||||||||||    
T  24392324 aaagaaaataacaataataataaaagag--ccttaggattactagttcgtcatggtgacaaatccttcacaaaccaaaccctaaaccta 24392410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 25030598 - 25030651
Alignment:
Q  254 ggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta 307  Q
    ||||||||||||  ||  ||||||||||||||| |||| |||||||||||||||    
T  25030598 ggattattggtctatcttagtgacaaacccttcacaaaccaaaccctaaaccta 25030651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 331
Target Start/End: Complemental strand, 29254586 - 29254530
Alignment:
Q  274 tgacaaacccttctcaaatcaaaccctaaacctaaactttatattagagcaactttct 331  Q
    |||||||||||||| ||| |||||||| ||||||||||||||||| || | |||||||    
T  29254586 tgacaaacccttcttaaa-caaaccctcaacctaaactttatattggacctactttct 29254530  T

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Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 163 - 317
Target Start/End: Complemental strand, 17051447 - 17051294
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattg 262  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||  |||  ||||||||||||    
T  17051447 ttttaataatgattagatgaaagtttgaaaggttaaaaagtttgaatttttaattgaaagaaaataacaataataataaaa-agtgtcttgggattattg 17051349  T
Q  263 gtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaactttatat 317  Q
    || | ||    ||||||| ||||| |||| |||||||||||||||||||||||||    
T  17051348 gttcatcttgatgacaaaaccttcacaaaccaaaccctaaacctaaactttatat 17051294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 297
Target Start/End: Complemental strand, 2722668 - 2722537
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataa---aagggtgctttgggattattgg 263  Q
    ||||||||||||||||||||||  ||| ||| ||| |||| |||||||||| ||||||||| | |||||||||||   || || || |||||||||||||    
T  2722668 aataatgattagatgagagttt--aagattataaagtttggatttttaattaaaagaaaataataataataataataaaaaggcgcattgggattattgg 2722571  T
Q  264 tccgtcaaagtgacaaacccttctcaaatcaaac 297  Q
    | ||||| | ||||||||| ||| |||| |||||    
T  2722570 ttcgtcataatgacaaacctttcacaaaccaaac 2722537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 3244438 - 3244502
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| |||||| ||||||||||| |||| |||||||||| |||||||||    
T  3244438 ttttaataatgattagatgaaagtttcgaaggttaaaaagtttggatttttaattaaaagaaaat 3244502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 47975522 - 47975443
Alignment:
Q  163 ttttaataatgattagat-gagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataa 241  Q
    |||||| ||||||||||| || |||||||||||| ||||| ||||||||||||||| ||||||||| | |||||||||||    
T  47975522 ttttaacaatgattagattgaaagtttcaaaggtcaaaaagtttgaatttttaattaaaagaaaataataataataataa 47975443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 3249569 - 3249631
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaa 225  Q
    |||||||||||||||||||| |||||| ||||||||||| |||| |||||||||| |||||||    
T  3249569 ttttaataatgattagatgaaagtttcgaaggttaaaaagtttggatttttaattaaaagaaa 3249631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 297
Target Start/End: Complemental strand, 16034759 - 16034677
Alignment:
Q  216 ttgaaagaaaattacaataataataaaag-ggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaac 297  Q
    |||||||||||| |||||||||||||||| ||||  |||||||||||||| ||||| | ||||||||||||| |||| |||||    
T  16034759 ttgaaagaaaataacaataataataaaagaggtgtcttgggattattggttcgtcataatgacaaacccttcacaaaccaaac 16034677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 1991543 - 1991480
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaa 226  Q
    |||||||||||||||||||| |||||| |||||| |||| |||| |||||||||| ||||||||    
T  1991543 ttttaataatgattagatgaaagtttcgaaggtttaaaagtttggatttttaattaaaagaaaa 1991480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 10607640 - 10607703
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| ||||||||||||| |||| |||| ||||||||||  ||||||||    
T  10607640 ttttaataatgattagatgaaagtttcaaaggtt-aaaagtttggatttttaattataagaaaat 10607703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 16384814 - 16384878
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| |||||||||||||||||  || || |||||||||  ||||||||    
T  16384814 ttttaataatgattagatgaaagtttcaaaggttaaaagtttggattttttaattataagaaaat 16384878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 309
Target Start/End: Original strand, 11826856 - 11826932
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaa 309  Q
    |||||||||||||| ||   ||||||||||||||| ||||  |||| ||||||||| ||||||||||| ||||||||||    
T  11826856 aataataataaaagagtc--ttgggattattggtcggtcatggtgataaacccttcacaaatcaaaccttaaacctaaa 11826932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 331
Target Start/End: Complemental strand, 13418995 - 13418937
Alignment:
Q  273 gtgacaaacccttctcaaatcaaaccctaaacctaaactttatattagagcaactttct 331  Q
    |||||||||||||| |||| ||||||||| |||||||||||||||| || | |||||||    
T  13418995 gtgacaaacccttcacaaaccaaaccctatacctaaactttatattggacctactttct 13418937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 26169643 - 26169696
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaatt 217  Q
    |||||||||||||||||||| ||||||||||||| |||| |||| ||||||||||    
T  26169643 ttttaataatgattagatgaaagtttcaaaggtt-aaaagtttggatttttaatt 26169696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 10601328 - 10601365
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaa 200  Q
    |||||||||||||||||||| |||||||||||||||||    
T  10601328 ttttaataatgattagatgaaagtttcaaaggttaaaa 10601365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 307
Target Start/End: Original strand, 11577184 - 11577269
Alignment:
Q  220 aagaaaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta 307  Q
    ||||||||||| |||||||||||||    | |||||||||||||| |||||  | |||||| ||||| |||| |||||||||||||||    
T  11577184 aagaaaattactataataataaaagca--ccttgggattattggttcgtcatggcgacaaatccttcacaaaccaaaccctaaaccta 11577269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 34053020 - 34053099
Alignment:
Q  219 aaagaaaattacaataataataaaag-ggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaac 297  Q
    ||||||||| ||| |||||||||||| ||||  ||||| |||||||| ||||| | ||||||||||||| |||| |||||    
T  34053020 aaagaaaataacagtaataataaaagaggtgtcttggggttattggttcgtcataatgacaaacccttcacaaaccaaac 34053099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 8685311 - 8685373
Alignment:
Q  254 ggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    ||||||||||| |||||  |||||||| ||||| |||| ||||||||||||||| ||||||||    
T  8685311 ggattattggttcgtcatggtgacaaatccttcacaaaccaaaccctaaacctagaactttat 8685373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 11848314 - 11848388
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta 307  Q
    |||||||||||||| |  | |||||||||||||| |||||  |||||||| ||||  |||| |||||||||||||||    
T  11848314 aataataataaaagcg--ccttgggattattggttcgtcatggtgacaaatccttaacaaaccaaaccctaaaccta 11848388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 17210183 - 17210131
Alignment:
Q  278 aaacccttctcaaatcaaaccctaaacctaaactttatattagagcaactttct 331  Q
    ||||||||| |||| |||||||||||||||||||||||||| || | |||||||    
T  17210183 aaacccttcacaaa-caaaccctaaacctaaactttatattggacctactttct 17210131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 331
Target Start/End: Complemental strand, 22039440 - 22039383
Alignment:
Q  274 tgacaaacccttctcaaatcaaaccctaaacctaaactttatattagagcaactttct 331  Q
    ||||||| ||||| |||| |||||| ||||||||||||||||||| || | |||||||    
T  22039440 tgacaaaaccttcacaaaccaaaccataaacctaaactttatattggacctactttct 22039383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 36079772 - 36079674
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtcc 266  Q
    ||||||||||||||||||||||   || ||| ||| |||| |||||||||| |||||||| || |||||||  ||||| | || |||||||||||||||     
T  36079772 aataatgattagatgagagttt--gagattataaagtttggatttttaattaaaagaaaa-tataataata--aaaagagagccttgggattattggtct 36079678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 321
Target Start/End: Complemental strand, 27407858 - 27407769
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttatattaga 321  Q
    |||||||||||||| |  | ||| |||||||||||  |||  |||||||||||||| |||| |||||| |||||||| |||||||| |||||    
T  27407858 aataataataaaagag--ccttgagattattggtcgatcatggtgacaaacccttcacaaaccaaaccttaaacctagaactttatgttaga 27407769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 42243920 - 42243993
Alignment:
Q  167 aataatgattagat-gagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataa 241  Q
    |||||||||||||| |||||||| | |  ||||||| |||| ||||||||||||| |||||| | |||||||||||    
T  42243920 aataatgattagattgagagtttgaga--ttaaaaagtttggatttttaattgaatgaaaataataataataataa 42243993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 23341279 - 23341173
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattg 262  Q
    |||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||| || | ||||||||||||||||| ||||||||||||    
T  23341279 ttttaacaatgattagatgaaagtttcaaaggttaaaaattttggatttttaattgaaagaaaagta-actaataataaaagggtgccttgggattattg 23341181  T
Q  263 gtccgtca 270  Q
    ||||||||    
T  23341180 gtccgtca 23341173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 20282840 - 20282776
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    ||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||| |||||||||    
T  20282840 ttttaataatgattagatgaaggtttcgaaggttaaaaagtttgaatttttaattaaaagaaaat 20282776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 321
Target Start/End: Original strand, 21344000 - 21344068
Alignment:
Q  254 ggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttatattaga 321  Q
    |||| ||||||||||||  |||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  21344000 ggatcattggtccgtcatggtgacaaacccttctcaaatcaaaccttaaacctagaactttatgttaga 21344068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 307
Target Start/End: Complemental strand, 16440428 - 16440345
Alignment:
Q  224 aaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta 307  Q
    |||| ||||||||||||||| ||||| || |||||||||||  ||||  |||||||| ||||| |||| |||||||||||||||    
T  16440428 aaataacaataataataaaaaggtgccttaggattattggtttgtcatggtgacaaatccttcacaaaccaaaccctaaaccta 16440345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 315
Target Start/End: Original strand, 21131502 - 21131587
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    ||||||||||||| || || |||||||||||||| | || |  ||||||||||||| |||| ||||||||||||||| ||||||||    
T  21131502 aataataataaaaaggcgccttgggattattggttcatctagatgacaaacccttcacaaaccaaaccctaaacctagaactttat 21131587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 321
Target Start/End: Complemental strand, 23704903 - 23704835
Alignment:
Q  254 ggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttatattaga 321  Q
    ||||||||||| |||||  || ||||||||||||||||||||||| |||||||| |||||||| |||||    
T  23704903 ggattattggtacgtcatggtaacaaacccttctcaaatcaaaccttaaacctagaactttatgttaga 23704835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 321
Target Start/End: Original strand, 20851 - 20939
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttatattaga 321  Q
    |||||||||||||| |  | ||||||| ||||||||||||  ||||||||||| |||||||||||||| |||| ||| |||||||| |||||    
T  20851 aataataataaaagag--ccttgggatcattggtccgtcatggtgacaaaccc-tctcaaatcaaaccttaaatctagaactttatgttaga 20939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 28496270 - 28496324
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaaccctt 285  Q
    |||||||||||||| | || ||||||| ||||||||||||  |||||||||||||    
T  28496270 aataataataaaagagagccttgggatcattggtccgtcatggtgacaaaccctt 28496324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 336
Target Start/End: Original strand, 29576790 - 29576896
Alignment:
Q  232 ataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatc-aaaccctaaaccta-aactttatattagagcaacttt 329  Q
    ||||||||||||  | || |||||||||||||| | ||| | ||||||||||||| |||| | ||||| |||||||| |||||||| ||||| | |||||    
T  29576790 ataataataaaaaagagccttgggattattggttcatcataatgacaaacccttcacaaaccaaaaccttaaacctataactttatgttagacctacttt 29576889  T
Q  330 ctgatga 336  Q
    || ||||    
T  29576890 ctaatga 29576896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 315
Target Start/End: Original strand, 19012473 - 19012537
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    |||||||||||||| |||||  |||||||| ||||| ||||||||| |||||||||| ||||||||    
T  19012473 ttgggattattggttcgtcatggtgacaaatccttcacaaatcaaa-cctaaacctagaactttat 19012537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 331
Target Start/End: Original strand, 24365804 - 24365861
Alignment:
Q  274 tgacaaacccttctcaaatcaaaccctaaacctaaactttatattagagcaactttct 331  Q
    ||||||| | ||| |||| |||||||||||||||||||||||||| || | |||||||    
T  24365804 tgacaaaactttcccaaaccaaaccctaaacctaaactttatattggacctactttct 24365861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 24322422 - 24322366
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta 307  Q
    |||||||||||||| | |||  |||||||| ||||| |||| |||||||||||||||    
T  24322422 ttgggattattggttcatcatggtgacaaatccttcacaaaccaaaccctaaaccta 24322366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 32440778 - 32440847
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataa 238  Q
    |||||||||||||||||||||| | |  ||| ||| |||| |||||||||| ||||||||| | ||||||||    
T  32440778 aataatgattagatgagagtttgata--ttataaagtttggatttttaattaaaagaaaataataataataa 32440847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 5487 - 5567
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaa 243  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| | |||||||||||||    
T  5487 ttttaataatgattagatgaaagtttcaaaggttaaaaaatttggatttttaattaaaagaaaataataataataataaaa 5567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 167 - 321
Target Start/End: Original strand, 11902001 - 11902155
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtcc 266  Q
    |||||||||||||||||| ||| | |  ||| ||| |||| |||||||| |||| |||||| ||||||||||||||| || || |||||||||||||| |    
T  11902001 aataatgattagatgagaatttgaga--ttataaagtttggatttttaactgaatgaaaataacaataataataaaaaggcgccttgggattattggttc 11902098  T
Q  267 gtcaaagtgacaaacccttctcaaatc-aaaccctaaaccta-aactttatattaga 321  Q
    |||| | ||||||||||||| |||| | ||||| |||||||| |||||||| |||||    
T  11902099 gtcataatgacaaacccttcacaaaccaaaaccttaaacctagaactttatgttaga 11902155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 231 - 321
Target Start/End: Complemental strand, 10731780 - 10731691
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttatattaga 321  Q
    |||||||||||||| ||   ||||||||||||||||||||  |||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  10731780 aataataataaaagagtc--ttgggattattggtccgtcatggtgacaaacccttctcaaatcaaaccttaaacctagaactttatgttaga 10731691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 231 - 321
Target Start/End: Complemental strand, 10945549 - 10945460
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttatattaga 321  Q
    |||||||||||||| ||   ||||||||||||||||||||  |||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  10945549 aataataataaaagagtc--ttgggattattggtccgtcatggtgacaaacccttctcaaatcaaaccttaaacctagaactttatgttaga 10945460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 11048984 - 11048920
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| |||||||||||||||||| |||| ||||||||||  ||||||||    
T  11048984 ttttaataatgattagatgaaagtttcaaaggttaaaaagtttggatttttaattcgaagaaaat 11048920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 307
Target Start/End: Original strand, 8561753 - 8561836
Alignment:
Q  224 aaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta 307  Q
    |||| ||||||||||||||| ||||| ||| |||||||||| |||||  |||||||| ||||| |||  |||||||||||||||    
T  8561753 aaataacaataataataaaaaggtgccttgagattattggttcgtcatggtgacaaatccttcacaatccaaaccctaaaccta 8561836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 318
Target Start/End: Complemental strand, 9192846 - 9192801
Alignment:
Q  273 gtgacaaacccttctcaaatcaaaccctaaacctaaactttatatt 318  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||    
T  9192846 gtgacaaacccttcacaaaccaaaccctaaacctaaactttatatt 9192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 315
Target Start/End: Original strand, 11921907 - 11921972
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    |||||||||||||| |||||  |||||||||||||| |||| ||||||||||||||| ||||||||    
T  11921907 ttgggattattggttcgtcatggtgacaaacccttcacaaaccaaaccctaaacctataactttat 11921972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 40559949 - 40560012
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    ||||||||||||| |||||| ||||||||||||| |||| |||| ||||||||||||||| ||||    
T  40559949 ttttaataatgatcagatgaaagtttcaaaggtt-aaaagtttggatttttaattgaaaggaaat 40560012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 10731896 - 10731824
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataa 241  Q
    |||||||||||||||||||||| | |  ||| ||| ||||||||||||||| ||||||||| | |||||||||||    
T  10731896 aataatgattagatgagagtttgaga--ttataaagtttgaatttttaattaaaagaaaataataataataataa 10731824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 10945665 - 10945593
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataa 241  Q
    |||||||||||||||||||||| | |  ||| ||| ||||||||||||||| ||||||||| | |||||||||||    
T  10945665 aataatgattagatgagagtttgaga--ttataaagtttgaatttttaattaaaagaaaataataataataataa 10945593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 5676096 - 5676038
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaa 309  Q
    |||| ||||||||| |||||  || ||||| ||||| ||||||||||||||||||||||    
T  5676096 ttggaattattggttcgtcatggtaacaaatccttcacaaatcaaaccctaaacctaaa 5676038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 7197885 - 7197831
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaaccctt 285  Q
    |||||||||||||| | || ||||||| ||||||||||||  |||||||||||||    
T  7197885 aataataataaaagagagccttgggatcattggtccgtcatggtgacaaaccctt 7197831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 309
Target Start/End: Complemental strand, 25190828 - 25190753
Alignment:
Q  232 ataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaa 309  Q
    |||||||||||||  ||| |||||||||||||| | ||   |||||||| ||||| |||| |||||||||||||||||    
T  25190828 ataataataaaag--tgccttgggattattggttcatcttggtgacaaatccttcacaaaccaaaccctaaacctaaa 25190753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 11981 - 12045
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||    
T  11981 ttttaataatgattagatgaaagtttcaaaggttaaaaagtttgaatttttaattaaaagaaaat 12045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 9e-21; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 167 - 297
Target Start/End: Complemental strand, 15760290 - 15760162
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtcc 266  Q
    |||||||||||||||||||||| | |  ||| ||| |||| |||||||| |||| |||||| ||||||||||||||| || |  |||||||||||||| |    
T  15760290 aataatgattagatgagagtttgaga--ttataaagtttggatttttaactgaatgaaaataacaataataataaaaaggcgtcttgggattattggttc 15760193  T
Q  267 gtcaaagtgacaaacccttctcaaatcaaac 297  Q
    |||| | ||||||||||||| |||| |||||    
T  15760192 gtcataatgacaaacccttcacaaaccaaac 15760162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 33633163 - 33633100
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    ||||||||||||| |||||| ||||||||||||| |||| |||| ||||||||||||||| ||||    
T  33633163 ttttaataatgatcagatgaaagtttcaaaggtt-aaaagtttggatttttaattgaaaggaaat 33633100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 297
Target Start/End: Complemental strand, 25397662 - 25397534
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtcc 266  Q
    |||||||||||||||||||||| | |  ||| ||| |||||||||||||   || |||||| ||||||||| ||||| || || ||||||||||||||      
T  25397662 aataatgattagatgagagtttgaga--ttataaagtttgaatttttaacataatgaaaataacaataatattaaaaaggcgccttgggattattggttt 25397565  T
Q  267 gtcaaagtgacaaacccttctcaaatcaaac 297  Q
     ||| | |||||||| |||| |||| |||||    
T  25397564 atcataatgacaaactcttcacaaaccaaac 25397534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 22285643 - 22285577
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaac 297  Q
    |||||||||||||| | || ||||||| ||||||||||||  |||||||||||||| |||| |||||    
T  22285643 aataataataaaagagagcattgggatcattggtccgtcatggtgacaaacccttcacaaaccaaac 22285577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 18008730 - 18008665
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    |||||||||||||||| |||  |||||||||||||  |||| ||||||||||||||| ||||||||    
T  18008730 ttgggattattggtccatcatggtgacaaaccctttgcaaaccaaaccctaaacctagaactttat 18008665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 23694488 - 23694436
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaatt 217  Q
    |||||||||||||||||||| | |||||||||||  |||||||| ||||||||||    
T  23694488 ttttaataatgattagatgaaaatttcaaaggtt--aaaatttggatttttaatt 23694436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 14877701 - 14877779
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaag 244  Q
    |||||||||||||||||||| ||||||||| |||  |||| ||| |||||||| | ||||||||| | ||||| ||||||||    
T  14877701 ttttaataatgattagatgaaagtttcaaaagtt--aaaagttggatttttaa-taaaagaaaataaaaataaaaataaaag 14877779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 21320052 - 21319970
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaacc-ctaaaccta-aactttatattagagcaactttct 331  Q
    |||||||||||||||| |||  |||||||||||||| |||| ||||||  |||||||| |||||||| ||||| | |||||||    
T  21320052 ttgggattattggtccatcatggtgacaaacccttcacaaaccaaacctttaaacctagaactttatgttagatctactttct 21319970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 42417935 - 42418001
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaac 297  Q
    |||||||||||||| | || ||||||| ||||||||||||   ||||||||||||| |||| |||||    
T  42417935 aataataataaaagagagccttgggatcattggtccgtcatgatgacaaacccttcacaaaccaaac 42418001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 18959887 - 18959829
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    ||||||||||||||||||||||  ||| ||| ||| |||| ||||||||||||| ||||||    
T  18959887 aataatgattagatgagagttt--aagattagaaagtttggatttttaattgaatgaaaat 18959829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 8210 - 8332
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtcc 266  Q
    |||||||||||||||| | |||||||||||||||| |||| ||||||||||  ||||||||   ||||| |||||||  | |||||||||||||||||||    
T  8210 aataatgattagatgaaaatttcaaaggttaaaaagtttggatttttaatt--aagaaaat---aataaaaataaaa--gagctttgggattattggtcc 8302  T
Q  267 gtcaaagtgacaaacccttctcaaatcaaa 296  Q
    ||||  | |||||||||||| |||| ||||    
T  8303 gtcatggcgacaaacccttcacaaaccaaa 8332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 20915363 - 20915444
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaag 244  Q
    ||||||||||||||| |||| |||||||||||||||||| |||||||||||||||| |||||||| | || || ||||||||    
T  20915363 ttttaataatgattaaatgaaagtttcaaaggttaaaaagtttgaatttttaattggaagaaaataataaaaaaaataaaag 20915444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 25577011 - 25577074
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| ||||||||||||| |||| | || ||||||||||||||| ||||    
T  25577011 ttttaataatgattagatgaaagtttcaaaggtt-aaaagtctggatttttaattgaaagtaaat 25577074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 34781037 - 34780974
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| ||||||||||||| |||| |||| ||||||||||  ||||||||    
T  34781037 ttttaataatgattagatgaaagtttcaaaggtt-aaaagtttggatttttaattataagaaaat 34780974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 315
Target Start/End: Complemental strand, 12411174 - 12411089
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    ||||||||||||| || || |||||||||||||| | ||    ||||||||||||| |||| ||||||||||||||| ||||||||    
T  12411174 aataataataaaaaggcgccttgggattattggttcatcttgatgacaaacccttcacaaaccaaaccctaaacctagaactttat 12411089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 16677705 - 16677640
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    |||||||||||||| |||||  |||||||| ||||| |||| ||||||||||||||| ||||||||    
T  16677705 ttgggattattggttcgtcatggtgacaaatccttcacaaaccaaaccctaaacctagaactttat 16677640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 297
Target Start/End: Original strand, 20167624 - 20167697
Alignment:
Q  224 aaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaac 297  Q
    |||| ||||||||||||||| ||||  ||||||||||||||||||||  | |||||| ||||| |||| |||||    
T  20167624 aaataacaataataataaaaaggtgtcttgggattattggtccgtcatggcgacaaatccttcacaaaccaaac 20167697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 318
Target Start/End: Complemental strand, 20738947 - 20738902
Alignment:
Q  273 gtgacaaacccttctcaaatcaaaccctaaacctaaactttatatt 318  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||||    
T  20738947 gtgacaaatccttcacaaaccaaaccctaaacctaaactttatatt 20738902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 298
Target Start/End: Complemental strand, 21382926 - 21382859
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaacc 298  Q
    |||||||||||||| | || ||||||||||||||||||||  | |||||| ||||| |||| ||||||    
T  21382926 aataataataaaagagagccttgggattattggtccgtcatggcgacaaatccttcacaaaccaaacc 21382859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 21999945 - 22000024
Alignment:
Q  219 aaagaaaattacaataataataaaag-ggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaac 297  Q
    ||||||||| |||||||||||||||| ||||  || |||| |||||| |||||  |||||||||||||| |||| |||||    
T  21999945 aaagaaaataacaataataataaaagaggtgtcttaggatcattggttcgtcatggtgacaaacccttcacaaaccaaac 22000024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 20968444 - 20968407
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaa 200  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  20968444 ttttaataatgactagatgaaagtttcaaaggttaaaa 20968407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 23435970 - 23435933
Alignment:
Q  233 taataataaaagggtgctttgggattattggtccgtca 270  Q
    |||||||||||||| || ||||||||||||||||||||    
T  23435970 taataataaaagggagccttgggattattggtccgtca 23435933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 23447337 - 23447300
Alignment:
Q  233 taataataaaagggtgctttgggattattggtccgtca 270  Q
    |||||||||||||| || ||||||||||||||||||||    
T  23447337 taataataaaagggagccttgggattattggtccgtca 23447300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 318
Target Start/End: Original strand, 6128 - 6234
Alignment:
Q  211 tttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaac 310  Q
    ||||||| ||||||||| |||||||||| | ||  | || |||||||||||||| ||||| ||||||||  ||||| |||| ||||||||||||||||||    
T  6128 tttaattaaaagaaaataacaataataaaataatagcgccttgggattattggttcgtcatagtgacaattccttcacaaa-caaaccctaaacctaaac 6226  T
Q  311 tttatatt 318  Q
    ||||||||    
T  6227 tttatatt 6234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 17987285 - 17987221
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    ||||||||||||||||||||  ||||||||||||||||| |||| ||||||||||| ||||||||    
T  17987285 ttttaataatgattagatgaatgtttcaaaggttaaaaagtttggatttttaattggaagaaaat 17987221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 309
Target Start/End: Complemental strand, 21240778 - 21240636
Alignment:
Q  167 aataatgattagat-gagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtc 265  Q
    |||||||||||| | || |||||||||||||||||| |||| ||||||  || || |||||| ||||||||||||||| || || ||||||||||||||     
T  21240778 aataatgattagtttgaaagtttcaaaggttaaaaagtttggatttttgttttaa-gaaaataacaataataataaaaaggcgccttgggattattggtt 21240680  T
Q  266 cgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaa 309  Q
    | ||    |||||||| |||| |||| |||| ||||||||||||    
T  21240679 catcttgatgacaaactcttcacaaaccaaatcctaaacctaaa 21240636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 18379595 - 18379659
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| |||||||||| ||||||| |||| |||||||||| ||| |||||    
T  18379595 ttttaataatgattagatgaaagtttcaaagattaaaaagtttggatttttaattaaaacaaaat 18379659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 41229008 - 41228946
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaa 226  Q
    ||||||||||||||| |||| ||||||||||||| |||| |||| |||||||||||||||||||    
T  41229008 ttttaataatgattaaatgaaagtttcaaaggtt-aaaagtttggatttttaattgaaagaaaa 41228946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 298
Target Start/End: Complemental strand, 41802973 - 41802853
Alignment:
Q  171 atgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtccgtca 270  Q
    |||||||||||| |||||||||||||||||| |||  ||||||||||  ||||||||   ||||| |||||||  | || ||||||||||||||||||||    
T  41802973 atgattagatgaaagtttcaaaggttaaaaagttttgatttttaatt--aagaaaat---aataaaaataaaa--gagccttgggattattggtccgtca 41802881  T
Q  271 aagtgacaaacccttctcaaatcaaacc 298  Q
      | |||||| ||||| |||| ||||||    
T  41802880 tggcgacaaatccttcacaaaccaaacc 41802853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 39286041 - 39286114
Alignment:
Q  219 aaagaaaattacaataataataaaag-ggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaa 291  Q
    ||||||||| |||||||||||||||| ||||  ||||||||||||||||||||  |||||||| ||||| ||||    
T  39286041 aaagaaaataacaataataataaaagaggtgtcttgggattattggtccgtcatggtgacaaatccttcacaaa 39286114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 23289364 - 23289423
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||||||||  ||||||||    
T  23289364 aataatgattagatgaaagtttcaaaggtt-aaaagtttgaatttttaattataagaaaat 23289423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 297
Target Start/End: Complemental strand, 17717472 - 17717344
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtcc 266  Q
    |||||||||||||||||||||| | |  ||| |||  ||| ||||||||   || |||||| ||||||||||||||| ||||  || |||| ||||||||    
T  17717472 aataatgattagatgagagtttgaga--ttataaaggttggatttttaacataatgaaaataacaataataataaaaaggtgtctttggatcattggtcc 17717375  T
Q  267 gtcaaagtgacaaacccttctcaaatcaaac 297  Q
    ||||  |||||||| ||||| |||| |||||    
T  17717374 gtcatggtgacaaatccttcacaaaccaaac 17717344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 8649545 - 8649471
Alignment:
Q  223 aaaattacaataataataaaag-ggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaa 296  Q
    ||||| |||||||||||||||| ||||  ||||||| ||||||||||||  |||||||||||||| |||| ||||    
T  8649545 aaaataacaataataataaaagaggtgtcttgggatcattggtccgtcatggtgacaaacccttcacaaaccaaa 8649471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 331
Target Start/End: Complemental strand, 49056072 - 49056014
Alignment:
Q  274 tgacaaacccttctcaaatcaaaccctaaacct-aaactttatattagagcaactttct 331  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||| || | |||||||    
T  49056072 tgacaaacccttcacaaatcaaaccctaaacctaaaactttatattggacctactttct 49056014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 44538914 - 44538852
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| | |||||||||||  |||| ||| |||||||||| |||||||||    
T  44538914 ttttaataatgattagatgaaaatttcaaaggtt--aaaagttggatttttaattaaaagaaaat 44538852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 20405428 - 20405365
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||| ||||||||||||| ||||||||||||| |||| |||| ||||||||||  ||||||||    
T  20405428 ttttaacaatgattagatgaaagtttcaaaggtt-aaaagtttggatttttaattataagaaaat 20405365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 20412962 - 20412893
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaattacaataataa 238  Q
    ||||||||||||||||||||||   || |||| || |||| |||||||||| ||||||||| ||||||||||    
T  20412962 aataatgattagatgagagttt--gagattaagaagtttggatttttaattaaaagaaaataacaataataa 20412893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 298
Target Start/End: Complemental strand, 28208531 - 28208464
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaacc 298  Q
    ||||||||||||| ||||| ||| |||||||||| |||||   ||||||| |||||||||| ||||||    
T  28208531 aataataataaaaaggtgccttgagattattggttcgtcatgatgacaaatccttctcaaaccaaacc 28208464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 20498183 - 20498118
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    |||||||||||||| | |||  |||||||| ||||| |||| ||||||||||||||| ||||||||    
T  20498183 ttgggattattggttcttcatggtgacaaatccttcacaaaccaaaccctaaacctagaactttat 20498118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 315
Target Start/End: Original strand, 20860157 - 20860222
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    |||||||||||||| ||| | ||||||||| ||||| |||| ||||||||||| ||| ||||||||    
T  20860157 ttgggattattggttcgtgatagtgacaaatccttcacaaaccaaaccctaaatctagaactttat 20860222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 23299512 - 23299459
Alignment:
Q  254 ggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta 307  Q
    ||||||||||| |||||  |||||||| ||||| |||| |||||||||||||||    
T  23299512 ggattattggttcgtcatggtgacaaatccttcacaaaccaaaccctaaaccta 23299459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 315
Target Start/End: Original strand, 25404542 - 25404607
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    |||||||||||||| |||||  || ||||| ||||| |||| ||||||||||||||| ||||||||    
T  25404542 ttgggattattggttcgtcatggttacaaatccttcacaaaccaaaccctaaacctagaactttat 25404607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 24621 - 24684
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| ||||||||||||| |||| || | ||||||||||||||||||||    
T  24621 ttttaataatgattagatgaaagtttcaaaggtt-aaaagttcggatttttaattgaaagaaaat 24684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 21184 - 21121
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||| ||||||||| ||||||||||||| |||| |||| ||||||||||||||||||||    
T  21184 ttttaataataattagatgaaagtttcaaaggtt-aaaagtttggatttttaattgaaagaaaat 21121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 53524 - 53461
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| ||||||||||||| |||| |||| ||||||||||||||| ||||    
T  53524 ttttaataatgattagatgaaagtttcaaaggtt-aaaagtttggatttttaattgaaaggaaat 53461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 142 - 79
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| ||||||||||||| |||| |||| ||||||||||  ||||||||    
T  142 ttttaataatgattagatgaaagtttcaaaggtt-aaaagtttggatttttaattataagaaaat 79  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 27660 - 27723
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| ||||||||||||| |||| |||| ||||||||||  ||||||||    
T  27660 ttttaataatgattagatgaaagtttcaaaggtt-aaaagtttggatttttaattataagaaaat 27723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 51133 - 51192
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||| ||||||||||||| |||| |||| |||||||||| |||||||||    
T  51133 aataatgattagatgaaagtttcaaaggtt-aaaagtttggatttttaattaaaagaaaat 51192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 13701 - 13764
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||||||||||| ||||||||||||| |||| |||| ||||||||||  ||||||||    
T  13701 ttttaataatgattagatgaaagtttcaaaggtt-aaaagtttggatttttaattataagaaaat 13764  T

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Target: scaffold0021; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 331
Target Start/End: Complemental strand, 100886 - 100753
Alignment:
Q  193 ggttaaaaaatttgaatttttaattgaaagaaaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaat 292  Q
    ||||| ||| |||| |||||||||| |||||||||   ||||| ||||||| |  || |||||||||||||| | ||  | ||||||||| |||  |||     
T  100886 ggttataaagtttggatttttaattaaaagaaaat---aataaaaataaaaaga-gccttgggattattggttcatcttaatgacaaaccattca-aaac 100792  T
Q  293 caaaccctaaacctaaactttatattagagcaactttct 331  Q
    |||||| ||||||||||||||||||| || | |||||||    
T  100791 caaaccataaacctaaactttatattggacctactttct 100753  T

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Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 8261 - 8340
Alignment:
Q  219 aaagaaaattacaataataataaaag-ggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaac 297  Q
    ||||||||| |||||||||||||||| ||||  ||||||| ||||||| ||||  |||||||||||||| |||| |||||    
T  8261 aaagaaaataacaataataataaaagaggtgtcttgggatcattggtctgtcatggtgacaaacccttcacaaaccaaac 8340  T

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Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 297
Target Start/End: Complemental strand, 23932 - 23853
Alignment:
Q  219 aaagaaaattacaataataataaaag-ggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaac 297  Q
    ||||||||| |||||||||||||||| ||||  ||||||  ||||||||||||  |||||||||||||| |||| |||||    
T  23932 aaagaaaataacaataataataaaagaggtgtcttgggaccattggtccgtcatggtgacaaacccttcacaaaccaaac 23853  T

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Target: scaffold0251 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 18294 - 18331
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaa 200  Q
    |||||||||||||||||||| |||||||||||||||||    
T  18294 ttttaataatgattagatgaaagtttcaaaggttaaaa 18331  T

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Target: scaffold0125 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 43372 - 43335
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaa 200  Q
    |||||||||||||||||||| |||||||||||||||||    
T  43372 ttttaataatgattagatgaaagtttcaaaggttaaaa 43335  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 315
Target Start/End: Complemental strand, 521381 - 521313
Alignment:
Q  248 gctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    ||||||||||||||||| | ||   |||||||||||||| |||| ||||||||||||||| ||||||||    
T  521381 gctttgggattattggttcatcttggtgacaaacccttcacaaaccaaaccctaaacctataactttat 521313  T

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Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 182055 - 182118
Alignment:
Q  163 ttttaataatgattagatgagagtttcaaaggttaaaaaatttgaatttttaattgaaagaaaat 227  Q
    |||||||||||| || |||| |||||||||| || |||| |||| ||||||||||||||| ||||    
T  182055 ttttaataatgaatatatgaaagtttcaaagatt-aaaagtttggatttttaattgaaaggaaat 182118  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 43743 - 43817
Alignment:
Q  224 aaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaacc 298  Q
    |||| ||||||||||||||| ||||  |||||||||||||| | |||  |||||||| ||||| |||| ||||||    
T  43743 aaataacaataataataaaaaggtgtcttgggattattggttcatcatggtgacaaatccttcacaaaccaaacc 43817  T

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Target: scaffold0443 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 315
Target Start/End: Original strand, 3905 - 3990
Alignment:
Q  231 aataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    |||||||||||||  | || |||||||||||||| | || |  |||||||||||||  ||| ||||||||||||||| ||||||||    
T  3905 aataataataaaaaagcgcattgggattattggttcatctagatgacaaacccttcataaaccaaaccctaaacctagaactttat 3990  T

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Target: scaffold0362 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 331
Target Start/End: Original strand, 8655 - 8763
Alignment:
Q  222 gaaaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaacctaaactttatattaga 321  Q
    |||||| |||||||||| | ||  | || |||||||||||||| | ||  | |||||||||||||  ||| |||| ||||||||||||||||||||| ||    
T  8655 gaaaataacaataataaaataaaagcgccttgggattattggttcatcttaatgacaaacccttcaaaaa-caaatcctaaacctaaactttatattgga 8753  T
Q  322 gcaactttct 331  Q
     | |||||||    
T  8754 cctactttct 8763  T

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Target: scaffold0213 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 200
Target Start/End: Complemental strand, 15973 - 15940
Alignment:
Q  167 aataatgattagatgagagtttcaaaggttaaaa 200  Q
    |||||||||||||||| |||||||||||||||||    
T  15973 aataatgattagatgaaagtttcaaaggttaaaa 15940  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 14709 - 14644
Alignment:
Q  251 ttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta-aactttat 315  Q
    |||||||||||||| |||||  |||||||| ||||| |||| |||| |||||||||| ||||||||    
T  14709 ttgggattattggttcgtcatggtgacaaatccttcacaaaccaaatcctaaacctagaactttat 14644  T

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Target: scaffold0074 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 22169 - 22255
Alignment:
Q  219 aaagaaaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta 307  Q
    ||||||||| |||||||| ||||||| |  | |||||||||||||| |||||  |||||||| ||||| |||   ||||||||||||||    
T  22169 aaagaaaataacaataattataaaagag--ccttgggattattggttcgtcatggtgacaaatccttcacaagcaaaaccctaaaccta 22255  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 307
Target Start/End: Complemental strand, 31773 - 31687
Alignment:
Q  219 aaagaaaattacaataataataaaagggtgctttgggattattggtccgtcaaagtgacaaacccttctcaaatcaaaccctaaaccta 307  Q
    ||||||||| ||||||| |||||||| ||   |||||||||||||| |||||   | ||||| ||||| |||||||||| |||||||||    
T  31773 aaagaaaataacaataacaataaaagtgtc--ttgggattattggttcgtcatgataacaaatccttcacaaatcaaactctaaaccta 31687  T

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