View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9612_low_46 (Length: 307)
Name: NF9612_low_46
Description: NF9612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9612_low_46 |
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Alignment Details
Target: chr8 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 11214127 - 11213838
Alignment:
| Q |
1 |
tcacaagattaacatgctgaatgttcccaatcgttgaaacctcagccctaaactctttctctccacctcccggcctctctaaacgtttcacagcaacaac |
100 |
Q |
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| T |
11214127 |
tcacaagattaacatgctgaatgttcccaattgttgaaacctcagccctaaactctttctctccacctcccggcctctctaaacgtttcacagcaacaac |
11214028 |
T |
|
| Q |
101 |
agtagaatcactcaactccccttgaaacaccgtcccaaacccaccatgcccaagtttctcagaaaaccctcgagtcgccaattgaagctccttgtacgaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
11214027 |
agtagaatcactcaactccccttgaaacaccgtcccaaacccaccatgcccaagtttctcagaaaaccctcgagtcgccaattgaagctccttgtaagaa |
11213928 |
T |
|
| Q |
201 |
aacaccttcaaattcaacacaggaacaaacccatcttcctccaacccattctccttcttcaatcgcttcctcttcgccaacaccaccaaa |
290 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11213927 |
aacaccttcaaattcaacacaggaacaaacccatcttcctccaacccattctccttcttcaatcgcttcctcttcgccaacaccaccaaa |
11213838 |
T |
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