View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9612_low_56 (Length: 289)
Name: NF9612_low_56
Description: NF9612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9612_low_56 |
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Alignment Details
Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 53097070 - 53097340
Alignment:
| Q |
1 |
tactagcgctagcttgtaaaaacaagagttctaaacaactaccgtctcatactccacttctacttttcccccaatatgtgaaaattgtgattctgtggac |
100 |
Q |
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| T |
53097070 |
tactagcgctagcttgtaaaaacaagagttctaaacaactaccgtctcatactccacttctacttttcccccaatatgtgaaaattgcgattctgtggac |
53097169 |
T |
|
| Q |
101 |
acatttaatctgcaatatgatgacaaaacacaataaataaatatgaaaaagaatttgaaaatagagatttcacacaatgcaacttaaaaactacacaccc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53097170 |
acatttaatctgcaatatgatgacaaaacacaataaataaatatgaaaaagaatttgaaaatagagatttcacacaatgcaacttaaaaactacacaccc |
53097269 |
T |
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| Q |
201 |
catttcaatagacaattcagagtcatgcacttcaactttgcaaccattttcactcttaaccatcataggca |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53097270 |
catttcaatagacaattcagagtcatgcacttcaactttgcaaccattttcactcttaaccatcataggca |
53097340 |
T |
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