View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9612_low_59 (Length: 284)
Name: NF9612_low_59
Description: NF9612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9612_low_59 |
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Alignment Details
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 36813257 - 36813005
Alignment:
| Q |
13 |
caaaggtaaatcataataggtgaaagtaaagtaaaaggctatagctttgttttccaagcagggnnnnnnntcagcaaatggtagaacatagcataaaaag |
112 |
Q |
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| T |
36813257 |
caaaggtaaatcataataggtgaaactaaagtaaaaggctatacctgtgttttccaagcagggaaaaaaatcagcaaatggtagaacatagcataaaaag |
36813158 |
T |
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| Q |
113 |
tgaatggattttgggttgatcagcaaaagtctggtgaaacatgagtgggtgaaaacattgcagagcagaaataaattcaatatggtcaaaagtcaaaagt |
212 |
Q |
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| T |
36813157 |
tgaatggattttgggttgatcagcaaaagtctggtgaaacatgagtgggtgaaaacattgcagagcagaaataaattcaatatggtcaaaagtcaaaagt |
36813058 |
T |
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| Q |
213 |
accttaattacttaaataattttaatcatatttttctgtcactatacctagctaa |
267 |
Q |
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| T |
36813057 |
accttaattacttaaataa--ttaatcatatttttctgtcactatacctagctaa |
36813005 |
T |
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