View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9612_low_68 (Length: 257)
Name: NF9612_low_68
Description: NF9612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9612_low_68 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 19 - 251
Target Start/End: Original strand, 14143051 - 14143283
Alignment:
| Q |
19 |
cctctagttggtaaatgcagcaaatcattattactggaccaatcttgaaaatcagacatagggatcctagcaggatctaacctacctctatgctcactag |
118 |
Q |
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| T |
14143051 |
cctctagttggtaaatgcagcaaatcattattactggaccaatcttgaaaatcagacatagggatcctagcaggatctaacctacctctatgctcactag |
14143150 |
T |
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| Q |
119 |
cttccaaaattgcattaaaatcacctatataacaccatggcagattgaattgattttgcaggttggaaagctcattccaaagcactcttctttttagata |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14143151 |
cttccaaaattgcattaaaatcacctatataacaccatggcagattgaattgattttgcaggttggaaagctcattccaaagcactcttctttttagata |
14143250 |
T |
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| Q |
219 |
acaagttgaagcatacacagccacaacaccaaa |
251 |
Q |
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| T |
14143251 |
acaagttgaagcatacacagccacaacaccaaa |
14143283 |
T |
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