View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9612_low_70 (Length: 255)

Name: NF9612_low_70
Description: NF9612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9612_low_70
NF9612_low_70
[»] chr3 (42 HSPs)
chr3 (12-243)||(3804277-3804523)
chr3 (14-243)||(47340062-47340308)
chr3 (14-82)||(53274973-53275041)
chr3 (14-82)||(901066-901134)
chr3 (14-78)||(18013448-18013512)
chr3 (20-82)||(36594403-36594465)
chr3 (14-84)||(52094072-52094142)
chr3 (14-65)||(34669638-34669689)
chr3 (14-65)||(36179114-36179165)
chr3 (14-65)||(43394536-43394587)
chr3 (14-84)||(1334273-1334343)
chr3 (14-82)||(2643247-2643315)
chr3 (14-82)||(4464894-4464962)
chr3 (14-82)||(9484609-9484677)
chr3 (14-82)||(16434835-16434903)
chr3 (14-82)||(29720408-29720476)
chr3 (14-82)||(29793356-29793424)
chr3 (14-82)||(32961259-32961327)
chr3 (14-82)||(42098605-42098673)
chr3 (14-82)||(48927780-48927848)
chr3 (14-82)||(49076404-49076472)
chr3 (14-82)||(49818770-49818838)
chr3 (14-65)||(12948070-12948121)
chr3 (14-65)||(29455686-29455737)
chr3 (14-65)||(38878456-38878507)
chr3 (30-81)||(46818383-46818434)
chr3 (14-84)||(50673688-50673758)
chr3 (14-79)||(53055603-53055668)
chr3 (14-82)||(34263682-34263750)
chr3 (14-81)||(28958977-28959044)
chr3 (14-65)||(34555181-34555232)
chr3 (14-65)||(46866373-46866424)
chr3 (16-78)||(1778188-1778250)
chr3 (17-82)||(29809358-29809423)
chr3 (14-55)||(36364741-36364782)
chr3 (14-82)||(1778374-1778442)
chr3 (14-66)||(4229166-4229218)
chr3 (14-66)||(4945829-4945881)
chr3 (14-78)||(26759496-26759560)
chr3 (14-66)||(34680210-34680262)
chr3 (14-82)||(38833943-38834011)
chr3 (14-66)||(43370320-43370372)
[»] chr8 (38 HSPs)
chr8 (14-80)||(40035302-40035368)
chr8 (14-80)||(44039840-44039906)
chr8 (14-65)||(4327099-4327150)
chr8 (14-79)||(25009160-25009225)
chr8 (14-82)||(28583283-28583351)
chr8 (14-82)||(44887695-44887763)
chr8 (14-65)||(15870205-15870256)
chr8 (14-81)||(20671270-20671337)
chr8 (14-80)||(29917908-29917973)
chr8 (20-82)||(44717309-44717371)
chr8 (17-83)||(44947029-44947095)
chr8 (14-82)||(761563-761631)
chr8 (14-82)||(3466296-3466364)
chr8 (16-68)||(8496868-8496920)
chr8 (14-82)||(23437793-23437861)
chr8 (14-82)||(40645622-40645690)
chr8 (14-65)||(25691577-25691628)
chr8 (14-65)||(30464462-30464513)
chr8 (14-73)||(36632173-36632232)
chr8 (20-67)||(44871360-44871407)
chr8 (20-78)||(66943-67001)
chr8 (18-79)||(17523821-17523882)
chr8 (14-78)||(4960168-4960232)
chr8 (14-82)||(14378666-14378734)
chr8 (14-66)||(30653389-30653441)
chr8 (14-82)||(37094145-37094213)
chr8 (14-82)||(43049249-43049317)
chr8 (14-82)||(44361934-44362002)
chr8 (14-65)||(5777534-5777585)
chr8 (14-65)||(21132908-21132959)
chr8 (14-61)||(38842197-38842244)
chr8 (14-84)||(11756787-11756857)
chr8 (14-80)||(27301877-27301943)
chr8 (14-68)||(29616306-29616360)
chr8 (14-55)||(25866103-25866144)
chr8 (17-66)||(35584157-35584206)
chr8 (26-78)||(9420745-9420797)
chr8 (14-78)||(14584187-14584251)
[»] chr5 (36 HSPs)
chr5 (14-84)||(32110655-32110725)
chr5 (14-82)||(9936871-9936939)
chr5 (14-80)||(28142943-28143009)
chr5 (14-82)||(34169842-34169910)
chr5 (14-82)||(8627148-8627216)
chr5 (14-82)||(19344682-19344750)
chr5 (14-65)||(14607540-14607591)
chr5 (14-85)||(39035570-39035641)
chr5 (20-82)||(14139948-14140010)
chr5 (17-82)||(14057721-14057786)
chr5 (17-66)||(30721671-30721720)
chr5 (14-82)||(1098188-1098256)
chr5 (14-82)||(1781128-1781196)
chr5 (14-78)||(2551610-2551674)
chr5 (16-80)||(14633022-14633086)
chr5 (14-82)||(30211724-30211792)
chr5 (17-65)||(31191163-31191211)
chr5 (14-82)||(40316831-40316899)
chr5 (14-82)||(41410642-41410710)
chr5 (14-65)||(13548243-13548294)
chr5 (14-65)||(20022890-20022941)
chr5 (14-65)||(20040398-20040449)
chr5 (30-84)||(2805808-2805862)
chr5 (14-82)||(1831364-1831432)
chr5 (17-73)||(4701139-4701195)
chr5 (14-66)||(27675569-27675621)
chr5 (14-78)||(30788222-30788286)
chr5 (14-78)||(32474005-32474069)
chr5 (14-78)||(33402574-33402638)
chr5 (14-66)||(39104262-39104314)
chr5 (14-66)||(41042820-41042872)
chr5 (23-82)||(39925216-39925275)
chr5 (14-61)||(41263112-41263159)
chr5 (30-84)||(2799642-2799696)
chr5 (14-66)||(14355528-14355580)
chr5 (20-84)||(34347478-34347542)
[»] chr1 (39 HSPs)
chr1 (14-84)||(49903672-49903742)
chr1 (20-78)||(12685891-12685949)
chr1 (14-82)||(6017436-6017504)
chr1 (14-84)||(38786933-38787003)
chr1 (14-84)||(44741354-44741424)
chr1 (14-82)||(31932165-31932233)
chr1 (14-82)||(40883424-40883492)
chr1 (14-81)||(33526149-33526216)
chr1 (14-61)||(36035720-36035767)
chr1 (14-82)||(5606378-5606446)
chr1 (14-82)||(10124122-10124190)
chr1 (14-82)||(26543881-26543949)
chr1 (14-82)||(44452208-44452276)
chr1 (14-82)||(48312042-48312109)
chr1 (14-82)||(52749294-52749362)
chr1 (14-65)||(5945795-5945846)
chr1 (14-65)||(7075317-7075368)
chr1 (14-65)||(10100500-10100551)
chr1 (14-80)||(8048735-8048801)
chr1 (20-78)||(10648194-10648252)
chr1 (21-82)||(8251143-8251204)
chr1 (14-82)||(45299331-45299399)
chr1 (14-66)||(50014548-50014600)
chr1 (19-66)||(1821620-1821667)
chr1 (14-73)||(9334403-9334462)
chr1 (14-73)||(9358176-9358235)
chr1 (14-61)||(47912315-47912362)
chr1 (14-80)||(48389081-48389147)
chr1 (20-85)||(2126662-2126727)
chr1 (17-82)||(28490173-28490238)
chr1 (21-82)||(29253492-29253553)
chr1 (1-82)||(52688543-52688622)
chr1 (2-34)||(507410-507442)
chr1 (14-82)||(4489074-4489142)
chr1 (14-82)||(31651888-31651956)
chr1 (14-82)||(40058956-40059024)
chr1 (14-66)||(41414232-41414284)
chr1 (14-66)||(41855708-41855760)
chr1 (14-82)||(44240532-44240600)
[»] chr4 (32 HSPs)
chr4 (14-78)||(29821067-29821131)
chr4 (14-82)||(42185287-42185355)
chr4 (14-79)||(3708269-3708334)
chr4 (14-82)||(39170971-39171039)
chr4 (14-82)||(48336410-48336478)
chr4 (14-81)||(39332812-39332879)
chr4 (17-82)||(37667759-37667824)
chr4 (14-79)||(50684936-50685001)
chr4 (14-66)||(1613200-1613252)
chr4 (14-82)||(23605884-23605952)
chr4 (14-78)||(43447182-43447246)
chr4 (14-82)||(55631857-55631925)
chr4 (14-65)||(8525398-8525449)
chr4 (14-65)||(31152691-31152742)
chr4 (14-68)||(33394104-33394158)
chr4 (14-79)||(53987762-53987827)
chr4 (14-82)||(10384861-10384929)
chr4 (14-82)||(24334363-24334431)
chr4 (14-82)||(28899053-28899121)
chr4 (14-82)||(52818667-52818735)
chr4 (20-71)||(1981370-1981421)
chr4 (14-65)||(43047417-43047468)
chr4 (14-65)||(48380503-48380554)
chr4 (20-65)||(40411597-40411642)
chr4 (14-67)||(47834126-47834179)
chr4 (14-66)||(1377532-1377584)
chr4 (14-82)||(6520448-6520516)
chr4 (14-66)||(6829466-6829518)
chr4 (14-82)||(28988376-28988444)
chr4 (14-82)||(31657338-31657406)
chr4 (14-78)||(37164033-37164097)
chr4 (14-82)||(46608226-46608294)
[»] chr2 (24 HSPs)
chr2 (14-85)||(8896281-8896352)
chr2 (14-80)||(43328783-43328849)
chr2 (14-82)||(8373447-8373515)
chr2 (14-82)||(11277564-11277632)
chr2 (14-82)||(16126064-16126132)
chr2 (14-65)||(4137440-4137490)
chr2 (19-82)||(16333493-16333556)
chr2 (14-82)||(2831720-2831788)
chr2 (14-82)||(7724593-7724661)
chr2 (14-78)||(10333560-10333624)
chr2 (14-82)||(12209002-12209070)
chr2 (14-82)||(16127762-16127830)
chr2 (14-82)||(41575575-41575643)
chr2 (14-65)||(5096278-5096329)
chr2 (14-65)||(37987918-37987969)
chr2 (14-65)||(38963825-38963876)
chr2 (14-65)||(40471766-40471817)
chr2 (14-60)||(11384027-11384073)
chr2 (17-82)||(26436668-26436733)
chr2 (14-66)||(18504501-18504553)
chr2 (14-78)||(22718525-22718589)
chr2 (14-65)||(31603398-31603449)
chr2 (14-80)||(44022283-44022349)
chr2 (17-66)||(15771067-15771116)
[»] chr6 (23 HSPs)
chr6 (14-80)||(4890113-4890179)
chr6 (14-82)||(24949548-24949616)
chr6 (14-82)||(2397783-2397851)
chr6 (14-82)||(16661589-16661657)
chr6 (14-82)||(17496305-17496373)
chr6 (14-82)||(28483051-28483119)
chr6 (14-82)||(29795464-29795532)
chr6 (14-78)||(32673765-32673829)
chr6 (14-65)||(6142494-6142545)
chr6 (14-65)||(29515013-29515064)
chr6 (14-83)||(10109398-10109467)
chr6 (14-82)||(2667312-2667380)
chr6 (14-85)||(12676989-12677061)
chr6 (14-66)||(16969407-16969459)
chr6 (14-82)||(24798533-24798601)
chr6 (14-82)||(32541464-32541532)
chr6 (14-65)||(2141598-2141649)
chr6 (14-65)||(24825195-24825246)
chr6 (14-84)||(30699272-30699342)
chr6 (14-80)||(31708908-31708974)
chr6 (20-81)||(31948634-31948695)
chr6 (14-82)||(2656657-2656725)
chr6 (14-65)||(6188643-6188694)
[»] chr7 (24 HSPs)
chr7 (14-70)||(5842142-5842198)
chr7 (12-84)||(36819627-36819699)
chr7 (14-73)||(28016137-28016196)
chr7 (16-87)||(38259492-38259563)
chr7 (14-65)||(40231958-40232009)
chr7 (17-82)||(9136648-9136713)
chr7 (14-78)||(40818680-40818744)
chr7 (14-84)||(38069062-38069132)
chr7 (14-80)||(38353581-38353647)
chr7 (14-66)||(36404909-36404961)
chr7 (14-65)||(16807129-16807180)
chr7 (17-84)||(32222561-32222628)
chr7 (14-80)||(25274000-25274066)
chr7 (14-84)||(38850713-38850783)
chr7 (17-82)||(37101012-37101077)
chr7 (14-82)||(30462204-30462272)
chr7 (14-82)||(39173848-39173916)
chr7 (14-65)||(35693813-35693864)
chr7 (20-67)||(46242469-46242516)
chr7 (14-80)||(3124129-3124195)
chr7 (14-84)||(18756610-18756680)
chr7 (20-78)||(47713421-47713479)
chr7 (14-67)||(38441841-38441894)
chr7 (14-82)||(32972310-32972378)
[»] scaffold0717 (1 HSPs)
scaffold0717 (14-84)||(4171-4241)
[»] scaffold0500 (1 HSPs)
scaffold0500 (14-82)||(658-726)
[»] scaffold0204 (1 HSPs)
scaffold0204 (14-82)||(23932-24000)
[»] scaffold0283 (1 HSPs)
scaffold0283 (17-83)||(3007-3073)
[»] scaffold0069 (1 HSPs)
scaffold0069 (14-80)||(4456-4522)
[»] scaffold0221 (1 HSPs)
scaffold0221 (14-82)||(5389-5457)
[»] scaffold0001 (1 HSPs)
scaffold0001 (14-65)||(183996-184047)
[»] scaffold0289 (1 HSPs)
scaffold0289 (40-73)||(9157-9190)
[»] scaffold0373 (1 HSPs)
scaffold0373 (14-66)||(6902-6954)


Alignment Details
Target: chr3 (Bit Score: 173; Significance: 4e-93; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 12 - 243
Target Start/End: Complemental strand, 3804523 - 3804277
Alignment:
Q  12 agtagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaataggag---------------ccacaa 96  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||               ||||||    
T  3804523 agtagtagaaaaatatgatcaaagtaaattagatcaaaattgtacattttcaaatgggtcatgtattgcggaataggagtaatacaaatggatgccacaa 3804424  T
Q  97 cggctaaaccaattagaggcagaataccaagaccacacacattctatcaaattcaaagtttacattcctacaagctaccaccacttggtacttggtatgg 196  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3804423 cgactaaaccaattagaggcagaataccaagaccacacacattctatcaaattcaaagtttacattcctagaagctaccaccacttggtacttggtatgg 3804324  T
Q  197 tagtgctctgtttcaagacaagtcaaccactagtaatggtctctgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  3804323 tagtgctctgtttcaagacaagtcaaccactagtaatggtctgtgct 3804277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 14 - 243
Target Start/End: Original strand, 47340062 - 47340308
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaataggag---------------ccacaacg 98  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||| |||||               ||||||||    
T  47340062 tagtagaaaaatatgatcaaagtaaattagatcaaaattgcacatcttcaaatgggtcatatattgcggaacaggagtaatacaaatggatgccacaacg 47340161  T
Q  99 gctaaaccaattagaggcagaataccaagaccaca--cacattctatcaaattcaaagtttacattcctacaagctaccaccacttggtacttggtatgg 196  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47340162 gctaaaccaattagaggcagaataccaagaccacatacacattctatcaaattcaaagtttacattcctacaagctaccaccacttggtacttggtatgg 47340261  T
Q  197 tagtgctctgtttcaagacaagtcaaccactagtaatggtctctgct 243  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  47340262 tagtgctctgtttcaagacaagtcaaccactagtaatggtctgtgct 47340308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 53274973 - 53275041
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||| | |||| ||||||||    
T  53274973 tagtagaaaaatatgatcaaaataagttaggtcaaaattgcacattttcaaataggtcatttattgcgg 53275041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 901066 - 901134
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||||  |||||| ||||||||    
T  901066 tagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgg 901134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 18013448 - 18013512
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||||||||||| |||| ||||    
T  18013448 tagtagaaaaatatgatcaaagtaaattatgtcaaaattgcacattttcaaatgggtcatctatt 18013512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 36594403 - 36594465
Alignment:
Q  20 aaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||||||| | ||||||    
T  36594403 aaaaatatgatcaaaataagttaggtcaaaattacacattttcaaatggatcatctgttgcgg 36594465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 52094072 - 52094142
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    ||||||||||||||| ||||| ||| |||||||||||||||| |||||||||||  |||| ||||||||||    
T  52094072 tagtagaaaaatatggtcaaattaagttagatcaaaattgcaaattttcaaatgagtcatctattgcggaa 52094142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 34669689 - 34669638
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||||    
T  34669689 tagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 34669638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 36179114 - 36179165
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  36179114 tagtagaaaaatatgatcaaagtaaattaagtcaaaattgcacattttcaaa 36179165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 43394536 - 43394587
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||||||||    
T  43394536 tagtagaaaaatatggtcaaaataagttagatcagaattgcacattttcaaa 43394587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 1334273 - 1334343
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    ||||| ||||||||| | ||| ||| ||||||||||||| ||||||||||||||| |||| ||||||||||    
T  1334273 tagtaaaaaaatatggtaaaattaagttagatcaaaattacacattttcaaatgggtcatctattgcggaa 1334343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 2643247 - 2643315
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| |||| ||| ||||||||||| |||||||||| | |||| ||||||||    
T  2643247 tagtagaaaaatatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctattgcgg 2643315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 4464962 - 4464894
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||||||||| |||| ||| | || |||||| |||||||||| |||||| ||||||||    
T  4464962 tagtagaaaaatatgatcaaagtaaactaggttaacattgcaaattttcaaatagatcatctattgcgg 4464894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 9484677 - 9484609
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  9484677 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 9484609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 16434835 - 16434903
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||| ||||||||| ||||||||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  16434835 tagtaaaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 16434903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 29720476 - 29720408
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||| |||||||| ||||||| ||| |||| |||||||||||||||||||||  |||||| ||||||||    
T  29720476 tagtggaaaaataggatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgg 29720408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 29793356 - 29793424
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  29793356 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 29793424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 32961327 - 32961259
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| ||||||||||| ||||| |||||| |||| ||||||||    
T  32961327 tagtagaaaaatatggtcaaactaagttaggtcaaaattgcaaatttttaaatgggtcatctattgcgg 32961259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 42098605 - 42098673
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  42098605 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 42098673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 48927780 - 48927848
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| | |||||||||||||||||||  |||||| ||||||||    
T  48927780 tagtagaaaaatatggtcaaagtaagttaggtaaaaattgcacattttcaaacagatcatttattgcgg 48927848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 49076404 - 49076472
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  49076404 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 49076472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 49818838 - 49818770
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| |||||||| ||||||||||| |||||||| |  ||||| ||||||||    
T  49818838 tagtagaaaaatatggtcaaagtaaattaggtcaaaattgcaaattttcaactaaatcatctattgcgg 49818770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 12948121 - 12948070
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  12948121 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 12948070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 29455686 - 29455737
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  29455686 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 29455737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 38878456 - 38878507
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||||||| |||  |||||||||||||||||||||    
T  38878456 tagtagaaaaatatggtcaaaataatttatgtcaaaattgcacattttcaaa 38878507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 46818383 - 46818434
Alignment:
Q  30 tcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcg 81  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||| |||||||    
T  46818383 tcaaagtaaattagatcaaaattgtacatttttaaatggatcatctattgcg 46818434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 50673758 - 50673688
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    ||||||||||||||| ||||| ||| |||  |||||||||||||||||||||  | |||| ||||||||||    
T  50673758 tagtagaaaaatatggtcaaagtaagttaagtcaaaattgcacattttcaaacaggtcatttattgcggaa 50673688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 53055603 - 53055668
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattg 79  Q
    ||||||||||||||| ||||||| | |||| |||||||| ||||||||||||| | |||| |||||    
T  53055603 tagtagaaaaatatggtcaaaattagttaggtcaaaattacacattttcaaattggtcatttattg 53055668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 34263682 - 34263750
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| ||||||||||||||||| |||  | |||| ||||||||    
T  34263682 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacatttttaaacaggtcatttattgcgg 34263750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 28958977 - 28959044
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcg 81  Q
    ||||||||||||||| ||||| |||  ||| ||||||||||| ||||| |||| |||||| |||||||    
T  28958977 tagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaatttttaaatagatcatctattgcg 28959044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 34555232 - 34555181
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||| |||||| ||||||||||||||    
T  34555232 tagtagaaaaatatggtcaaagtaagttaggtcaaaaatgcacattttcaaa 34555181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 46866424 - 46866373
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||   |||||||| |||| |||||||||||||||||||||    
T  46866424 tagtagaaaaatattgccaaaataagttaggtcaaaattgcacattttcaaa 46866373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 1778250 - 1778188
Alignment:
Q  16 gtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||||||||||||| || |||| ||||| | |||||||| |||||| |||||| ||||    
T  1778250 gtagaaaaatatgatcaaagtatattaaatcaatagtgcacattgtcaaatagatcatctatt 1778188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 29809423 - 29809358
Alignment:
Q  17 tagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||||||||||| || || |||  ||||||||||||||| |||||||||| | |||| ||||||||    
T  29809423 tagaaaaatatggtcgaagtaagctagatcaaaattgcaaattttcaaataggtcatctattgcgg 29809358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 36364741 - 36364782
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgca 55  Q
    ||||||||||||||| ||||||||| |||| |||||||||||    
T  36364741 tagtagaaaaatatggtcaaaataagttaggtcaaaattgca 36364782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 1778442 - 1778374
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| |||  ||  ||||||||||| |||||||||| | |||| ||||||||    
T  1778442 tagtagaaaaatatggtcaaagtaagctaagtcaaaattgcaaattttcaaataggtcatctattgcgg 1778374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 4229166 - 4229218
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||| ||||||||||||||| |||  ||| ||||||||||| ||||||||||    
T  4229166 tagtaaaaaaatatgatcaaagtaagctaggtcaaaattgcaaattttcaaat 4229218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 4945829 - 4945881
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||||| ||||| ||| |||| ||||||||||| ||| ||||||    
T  4945829 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcaaattctcaaat 4945881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 26759560 - 26759496
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||||||||| ||||| ||| |||| |||||||| || ||||| |||| |||||| ||||    
T  26759560 tagtagaaaaatatggtcaaagtaagttaggtcaaaattacaaatttttaaatagatcatttatt 26759496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 34680262 - 34680210
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||||| ||||| |||| |||||||||||| || ||||| ||||    
T  34680262 tagtagaaaaatatggtcaaagtaaactagatcaaaattacaaatttttaaat 34680210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 38833943 - 38834011
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| |||||||| |||||||| |||  | |||| ||||||||    
T  38833943 tagtagaaaaatatggtcaaagtaagttaggtcaaaattacacatttttaaacaggtcatttattgcgg 38834011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 43370372 - 43370320
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||| ||||||| ||||||| ||| |||  ||||||||||||||||||||||    
T  43370372 tagtataaaaatacgatcaaagtaagttatgtcaaaattgcacattttcaaat 43370320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 40035368 - 40035302
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgc 80  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||||    
T  40035368 tagtagaaaaatatgattaaactaaattagatcaaaattgcaaattttcaaatggatcatctattgc 40035302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 44039906 - 44039840
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgc 80  Q
    ||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||| ||||||    
T  44039906 tagtagaaaaatatgatcaaactaagccagatcaaaattgcacattttcaaatggatcatttattgc 44039840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 4327099 - 4327150
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  4327099 tagtagaaaaatatgatcaaagtaagttagatcaaaattgcacattttcaaa 4327150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 25009225 - 25009160
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattg 79  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||||||||  |||||| |||||    
T  25009225 tagtagaaaaatatggtcaaagtaaattaggtcaaaattgcacattttcaaacagatcatttattg 25009160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 28583283 - 28583351
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||||||||  | |||| ||||||||    
T  28583283 tagtagaaaaatatgctcaaagtaaattaggtcaaaattgcacattttcaaaaaggtcatctattgcgg 28583351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 44887695 - 44887763
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| | || |||||||||||||||||||||| |||||| ||||||||    
T  44887695 tagtagaaaaatatggtcaaactaagtcaggtcaaaattgcacattttcaaatagatcatttattgcgg 44887763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 15870256 - 15870205
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||||||||||    
T  15870256 tagtagaaaaatatgatcaaagtaaattagatcaaaattgttcattttcaaa 15870205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 20671337 - 20671270
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcg 81  Q
    ||||||||||||||| ||||| ||| |||| |||||||| ||||||||||||| |||||| |||||||    
T  20671337 tagtagaaaaatatggtcaaagtaagttaggtcaaaattacacattttcaaattgatcatctattgcg 20671270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 29917908 - 29917973
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgc 80  Q
    ||||||||||||||| ||||||||| |||| |||||||| |||||||| ||||||||||| ||||||    
T  29917908 tagtagaaaaatatggtcaaaataagttaggtcaaaattacacatttt-aaatggatcatctattgc 29917973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 44717371 - 44717309
Alignment:
Q  20 aaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||| |||| |||||||| ||||||||||||||||||||  |||||||    
T  44717371 aaaaatatgatcaaagtaagttagttcaaaattacacattttcaaatggatcatccattgcgg 44717309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 44947095 - 44947029
Alignment:
Q  17 tagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgga 83  Q
    ||||||||||| |||||| |||| ||| ||||||||||||||||| |||||| |||| |||||||||    
T  44947095 tagaaaaatataatcaaagtaaaataggtcaaaattgcacatttttaaatgggtcatctattgcgga 44947029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 761631 - 761563
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| |||||||| |||||||| ||||||||||||  | |||| ||||||||    
T  761631 tagtagaaaaatatggtcaaagtaaattaggtcaaaattacacattttcaaacaggtcatttattgcgg 761563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 3466364 - 3466296
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||||||||||||  |||||| ||| |||| |||||||||| ||||||||||||| |||| ||||||||    
T  3466364 tagtagaaaaataaaatcaaagtaagttaggtcaaaattgcgcattttcaaatgggtcatctattgcgg 3466296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 8496868 - 8496920
Alignment:
Q  16 gtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatgg 68  Q
    ||||||||||||| ||||| ||| |||| ||||||||||||||||||||||||    
T  8496868 gtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgg 8496920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 23437793 - 23437861
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| |||||  ||||||| |||||||||||||||||||||  | |||| ||||||||    
T  23437793 tagtagaaaaatatggtcaaagcaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgg 23437861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 40645690 - 40645622
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||||||||| ||| |||| ||||||||| | ||||||||||||  ||| ||||||||    
T  40645690 tagtagaaaaatatgatcaaagtaagttaggtcaaaattgaaaattttcaaatgggccatctattgcgg 40645622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 25691577 - 25691628
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  25691577 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 25691628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 30464513 - 30464462
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  30464513 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 30464462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 36632173 - 36632232
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcat 73  Q
    ||||||||||||||| ||||||||| ||||||||||||| || ||||| |||||| ||||    
T  36632173 tagtagaaaaatatggtcaaaataagttagatcaaaattacagatttttaaatgggtcat 36632232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 44871407 - 44871360
Alignment:
Q  20 aaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatg 67  Q
    ||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  44871407 aaaaatatgatcaaattaaattagattaaaattgcaaattttcaaatg 44871360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 67001 - 66943
Alignment:
Q  20 aaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    |||||||  ||||||||||||||  |||||||| |||||||||||||||||||| ||||    
T  67001 aaaaatacaatcaaaataaattatgtcaaaattacacattttcaaatggatcatctatt 66943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 17523882 - 17523821
Alignment:
Q  18 agaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattg 79  Q
    ||||||||||||||||| ||| |||| | |||| ||||||||||||||||| |||| |||||    
T  17523882 agaaaaatatgatcaaagtaagttaggttaaaactgcacattttcaaatgggtcatctattg 17523821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 4960232 - 4960168
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||||||||| ||||| |||  ||| ||||||||||| |||||||||| |||||| ||||    
T  4960232 tagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatctatt 4960168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 14378666 - 14378734
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||  ||||| ||| |||| |||||||||||||||||||||   ||||| ||||||||    
T  14378666 tagtagaaaaatatagtcaaagtaagttaggtcaaaattgcacattttcaaacctatcatttattgcgg 14378734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 30653441 - 30653389
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||||| ||||| ||| |||||| ||||||||||||||| ||||    
T  30653441 tagtagaaaaatatggtcaaagtaagttagattaaaattgcacatttttaaat 30653389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 37094213 - 37094145
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| |||  ||| ||||||||||| |||||||||| | |||| ||||||||    
T  37094213 tagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgg 37094145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 43049249 - 43049317
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| | |  |||||||||||| || |||||||||| |||||| ||||||||    
T  43049249 tagtagaaaaatatggtcaaagttagctagatcaaaattacaaattttcaaatagatcatttattgcgg 43049317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 44362002 - 44361934
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||| ||||| ||||| |||| ||| ||||||||||| |||||||||| | |||| ||||||||    
T  44362002 tagtagaaatatatggtcaaagtaaactagctcaaaattgcaaattttcaaataggtcatctattgcgg 44361934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 5777534 - 5777585
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| | |||||||  |||||||||||| ||||||||||||    
T  5777534 tagtagaaaaatatggttaaaataagatagatcaaaattacacattttcaaa 5777585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 21132908 - 21132959
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||  |||||||||||||||||||||    
T  21132908 tagtagaaaaatatggtcaaagtaagttaagtcaaaattgcacattttcaaa 21132959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 38842244 - 38842197
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacatttt 61  Q
    ||||||||||||||||||||| ||| |||| |||||||| ||||||||    
T  38842244 tagtagaaaaatatgatcaaagtaagttaggtcaaaattacacatttt 38842197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 11756857 - 11756787
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    |||| |||||||||| ||||| ||| |||| ||||||||||| ||||||||||   |||| ||||||||||    
T  11756857 tagttgaaaaatatggtcaaagtaagttaggtcaaaattgcaaattttcaaataagtcatctattgcggaa 11756787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 27301943 - 27301877
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgc 80  Q
    ||||||||||||||  ||||| ||||||| |||||||||| | |||||||||||  |||| ||||||    
T  27301943 tagtagaaaaatattgtcaaagtaaattatatcaaaattgaatattttcaaatgagtcatctattgc 27301877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 29616306 - 29616360
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatgg 68  Q
    ||||||| ||||||||||||| ||| |||||||||||||  | ||||||||||||    
T  29616306 tagtagacaaatatgatcaaagtaagttagatcaaaatttaatattttcaaatgg 29616360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 25866144 - 25866103
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgca 55  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||    
T  25866144 tagtagaaaaatatggtcaaagtaagttagatcaaaattgca 25866103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 35584157 - 35584206
Alignment:
Q  17 tagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||||||||||| ||||| |||| | |||||||| ||||||    
T  35584157 tagaaaaatatgatcaaaatatattaggtcaataatgcacattgtcaaat 35584206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 9420745 - 9420797
Alignment:
Q  26 atgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||||||  ||||||||| | ||||||||||||||| |||||| ||||    
T  9420745 atgatcaaaatatgttagatcaataatgcacattttcaaatagatcatctatt 9420797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 14584187 - 14584251
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||| ||||||||||||||| |||  ||||||||||||  | |||||||||| |||||| ||||    
T  14584187 tagtaaaaaaatatgatcaaagtaagctagatcaaaattataaattttcaaatagatcatctatt 14584251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 32110655 - 32110725
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||| || ||||||||||    
T  32110655 tagtagaaaaatacggtcaaagtaaattagatcaaaattgcacattttcaaatggattatctattgcggaa 32110725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 9936871 - 9936939
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||| ||||||||    
T  9936871 tagtagaaaaatatggtcaaaataaattagatcaaaattgcacatttttaaatatatcatttattgcgg 9936939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 28143009 - 28142943
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgc 80  Q
    ||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||| || ||||||    
T  28143009 tagtagaaaaatatggtcaaagtaaattagattaaaattgcacattttcaaatggattatctattgc 28142943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 34169910 - 34169842
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| |||| ||||||||||||||| |||||||||| |||||| ||||||||    
T  34169910 tagtagaaaaatatggtcaaagtaaactagatcaaaattgcaaattttcaaatagatcatctattgcgg 34169842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 8627216 - 8627148
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||| ||||||||| ||||| ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  8627216 tagtaaaaaaatatggtcaaagtaagttagatcaaaattgcacattttcaaataggtcatctattgcgg 8627148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 19344682 - 19344750
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||||||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  19344682 tagtagaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 19344750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 14607540 - 14607591
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  14607540 tagtagaaaaatatggtcaaattaaattaggtcaaaattgcacattttcaaa 14607591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 39035641 - 39035570
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaat 85  Q
    |||||||| |||||||| ||||||||||||||||||||| |  ||||||||||| || || |||||||||||    
T  39035641 tagtagaataatatgattaaaataaattagatcaaaattacttattttcaaatgaataatttattgcggaat 39035570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 14140010 - 14139948
Alignment:
Q  20 aaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| |||| ||||||||||||||| |||||||| | |||||| ||||||||    
T  14140010 aaaaatatgatcaaagtaaactagatcaaaattgcaaattttcaattagatcatctattgcgg 14139948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 14057786 - 14057721
Alignment:
Q  17 tagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||||||||||||||||| ||| |||| ||||||||||| |||||||||  |||||| ||||||||    
T  14057786 tagaaaaatatgatcaaagtaagttaggtcaaaattgcatattttcaaacagatcatttattgcgg 14057721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 30721671 - 30721720
Alignment:
Q  17 tagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    |||||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  30721671 tagaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaat 30721720  T

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Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 1098256 - 1098188
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  1098256 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 1098188  T

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Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 1781128 - 1781196
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  1781128 tagtagaaaaatatggtcaaagtaacttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 1781196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 2551610 - 2551674
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||||||||| | ||||||| |||| ||||||||||||||||| |||||| |||| ||||    
T  2551610 tagtagaaaaatatggttaaaataagttaggtcaaaattgcacatttttaaatgggtcatctatt 2551674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 14633086 - 14633022
Alignment:
Q  16 gtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgc 80  Q
    ||||||||||||| ||||| ||| |||| |||||||||||||||||||||  |||||| ||||||    
T  14633086 gtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgc 14633022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 30211724 - 30211792
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||| |||  | |||| ||||||||    
T  30211724 tagtagaaaaatatggtcaaagtaagttagatcaaaattgcacatttttaaacaggtcatttattgcgg 30211792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 31191163 - 31191211
Alignment:
Q  17 tagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    |||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  31191163 tagaaaaatatggtcaaagtaaattaggtcaaaattgcacattttcaaa 31191211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 40316899 - 40316831
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| || || |||||||| |||||||||||||||||||||  | |||| ||||||||    
T  40316899 tagtagaaaaatatggtcgaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgg 40316831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 41410642 - 41410710
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| || || |||||||| |||||||||||||||||||||  | |||| ||||||||    
T  41410642 tagtagaaaaatatggtcgaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgg 41410710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 13548294 - 13548243
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  13548294 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 13548243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 20022941 - 20022890
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  20022941 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 20022890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 20040398 - 20040449
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  20040398 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 20040449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 2805862 - 2805808
Alignment:
Q  30 tcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    ||||| |||||||| |||||||||||||||||||||||| |||| |||| |||||    
T  2805862 tcaaagtaaattaggtcaaaattgcacattttcaaatgggtcatctattacggaa 2805808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 1831432 - 1831364
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| || || |||||||  |||||||||||||||||||||  | |||| ||||||||    
T  1831432 tagtagaaaaatatggtcgaagtaaattatgtcaaaattgcacattttcaaacaggtcatttattgcgg 1831364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 4701195 - 4701139
Alignment:
Q  17 tagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcat 73  Q
    |||||||||||| ||||||||| ||||||| |  |||||||||||||||||| ||||    
T  4701195 tagaaaaatatggtcaaaataagttagatcgatgttgcacattttcaaatgggtcat 4701139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 27675621 - 27675569
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||||||||||| |||  ||| ||||||||||| ||||||||||    
T  27675621 tagtagaaaaatatgatcaaagtaagctaggtcaaaattgcaaattttcaaat 27675569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 30788286 - 30788222
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||||||||| ||||| ||| |||  |||||||| ||||||||||||||| |||| ||||    
T  30788286 tagtagaaaaatatggtcaaagtaagttatgtcaaaattacacattttcaaatgggtcatatatt 30788222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 32474005 - 32474069
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||||||||| ||||||||| |||  | |||||| ||||||||||||||| |||| ||||    
T  32474005 tagtagaaaaatatggtcaaaataagttatgttaaaattacacattttcaaatgggtcatctatt 32474069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 33402574 - 33402638
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||||||||||||||| ||| |||| |||||||| |||||||| |||  |||||| ||||    
T  33402574 tagtagaaaaatatgatcaaagtaagttaggtcaaaattacacatttttaaacagatcatctatt 33402638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 39104262 - 39104314
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||||| ||||| ||||||| ||||||||| |||||||| ||||    
T  39104262 tagtagaaaaatatggtcaaattaaattatatcaaaattacacatttttaaat 39104314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 41042820 - 41042872
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||||| ||||| |||  ||||||||||||||| ||||||||||    
T  41042820 tagtagaaaaatatggtcaaagtaagctagatcaaaattgcaaattttcaaat 41042872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 39925275 - 39925216
Alignment:
Q  23 aatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||||| ||||| |||||| | |||||||| || ||||||||||||||||| ||||||||    
T  39925275 aatatggtcaaagtaaatttggtcaaaattacaaattttcaaatggatcatctattgcgg 39925216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 41263112 - 41263159
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacatttt 61  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||    
T  41263112 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacatttt 41263159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 2799696 - 2799642
Alignment:
Q  30 tcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    ||||| ||| |||| |||||||||||||||||||||||| |||| |||| |||||    
T  2799696 tcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatctattacggaa 2799642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 14355580 - 14355528
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||||  |||| ||||||||| |||||||| |||||||| ||||    
T  14355580 tagtagaaaaatatagtcaagataaattaggtcaaaattacacatttttaaat 14355528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 34347542 - 34347478
Alignment:
Q  20 aaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    ||||||||| ||||| ||| |||  |||||||| ||||||||||||| | |||| ||||||||||    
T  34347542 aaaaatatggtcaaagtaagttatgtcaaaattacacattttcaaataggtcatctattgcggaa 34347478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 49903672 - 49903742
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    ||||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||| ||||||||||    
T  49903672 tagtagaaaaatatgatcaaagtaaattaggtcaaaatttcacatttttaaatggatcatctattgcggaa 49903742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 12685891 - 12685949
Alignment:
Q  20 aaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||    
T  12685891 aaaaatatgatcaaaataaattagatcaaaattgcacattttcaaacgggtcatctatt 12685949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 6017436 - 6017504
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||||||||||||  |||||| ||||||||    
T  6017436 tagtagaaaaatatggtcaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgcgg 6017504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 38786933 - 38787003
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    |||| |||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||| |||| |||||    
T  38786933 tagttgaaaaatatgatcaaagtaagttatatcaaaattgcatattttcaaatggatcatctattacggaa 38787003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 44741424 - 44741354
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||   |||| ||||||||||    
T  44741424 tagtagaaaaatatggtcaaaataagttagatcaaaattgcacatattcaaatatgtcatttattgcggaa 44741354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 31932165 - 31932233
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| |||| ||| ||||||||||| |||||||||| |||||| ||||||||    
T  31932165 tagtagaaaaatatggtcaaagtaaactaggtcaaaattgcaaattttcaaatagatcatctattgcgg 31932233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 40883492 - 40883424
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||| |||||||||||||||| ||| |||| |||||||| |||||||| ||||||||||| ||||||||    
T  40883492 tagttgaaaaatatgatcaaagtaagttaggtcaaaatttcacatttttaaatggatcatctattgcgg 40883424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 33526149 - 33526216
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcg 81  Q
    ||||||||||||||  ||||| ||||||||||||||||| |||||||| ||||| ||||| |||||||    
T  33526149 tagtagaaaaatatagtcaaagtaaattagatcaaaattacacatttttaaatgaatcatctattgcg 33526216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 36035767 - 36035720
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacatttt 61  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  36035767 tagtagaaaaatatgatcaaagtaaattagatcaaaattacacatttt 36035720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 5606378 - 5606446
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| | ||| ||| ||||||||||||||||| ||||||||| | |||| ||||||||    
T  5606378 tagtagaaaaatatggttaaagtaagttagatcaaaattgcactttttcaaataggtcatttattgcgg 5606446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 10124190 - 10124122
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  10124190 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 10124122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 26543949 - 26543881
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| ||||||||| |||||||||||  |||||| ||||||||    
T  26543949 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgtacattttcaaacagatcatttattgcgg 26543881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 44452276 - 44452208
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| |||||||| |||||||||||||||  ||| ||||||||    
T  44452276 tagtagaaaaatatggtcaaagtaagttaggtcaaaattacacattttcaaatgggacatctattgcgg 44452208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 48312109 - 48312042
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||| ||||||||||| |||   ||||||||||||||||||||||| |||| ||||||||    
T  48312109 tagtagaaaaatacgatcaaaataagttaagccaaaattgcacattttcaaatgg-tcatctattgcgg 48312042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 52749362 - 52749294
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||||||| |||| | |||||||||||||||||||  | |||| ||||||||    
T  52749362 tagtagaaaaatatggtcaaaataagttaggtaaaaattgcacattttcaaacaggtcatttattgcgg 52749294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 5945846 - 5945795
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| | |||||||||||  |||||||||||||||||||||    
T  5945846 tagtagaaaaatatggttaaaataaattatgtcaaaattgcacattttcaaa 5945795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 7075317 - 7075368
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||| ||||||||    
T  7075317 tagtagaaaaatatggtcaaagtaagttagatcaaaattgcacgttttcaaa 7075368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 10100500 - 10100551
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  10100500 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 10100551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 8048735 - 8048801
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgc 80  Q
    ||||||||||||||| |||||||||  ||| ||||||||||| |||||||||| | |||| ||||||    
T  8048735 tagtagaaaaatatggtcaaaataagctaggtcaaaattgcaaattttcaaataggtcatctattgc 8048801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 10648194 - 10648252
Alignment:
Q  20 aaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||| ||||||||| |||| |||||||| ||||||||||||| |||||| ||||    
T  10648194 aaaaatatggtcaaaataagttaggtcaaaattacacattttcaaatagatcatctatt 10648252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 8251143 - 8251204
Alignment:
Q  21 aaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||||||| ||||| ||| ||||||||||||||||||||||||||  | |||| ||||||||    
T  8251143 aaaatatggtcaaagtaagttagatcaaaattgcacattttcaaacaggtcatttattgcgg 8251204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 45299399 - 45299331
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||| ||||||||| ||||| ||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  45299399 tagtataaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 45299331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 50014548 - 50014600
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||||| ||||| |||  ||||||||||||||| ||||||||||    
T  50014548 tagtagaaaaatatggtcaaagtaagctagatcaaaattgcaaattttcaaat 50014600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 1821620 - 1821667
Alignment:
Q  19 gaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    |||||||||| ||||| ||| |||| ||||||||||||||||||||||    
T  1821620 gaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaat 1821667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 9334462 - 9334403
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcat 73  Q
    ||||||||||||||| |||||  || ||||||||||||| || |||||||||| ||||||    
T  9334462 tagtagaaaaatatggtcaaagcaagttagatcaaaattacaaattttcaaatagatcat 9334403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 9358235 - 9358176
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcat 73  Q
    ||||||||||||||| |||||  || ||||||||||||| || |||||||||| ||||||    
T  9358235 tagtagaaaaatatggtcaaagcaagttagatcaaaattacaaattttcaaatagatcat 9358176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 47912362 - 47912315
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacatttt 61  Q
    ||||||||||||||| |||||||||||||  |||||||| ||||||||    
T  47912362 tagtagaaaaatatggtcaaaataaattatgtcaaaattacacatttt 47912315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 48389147 - 48389081
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgc 80  Q
    ||||||||||||||| ||||| |||  ||| ||||||||||| |||||||||| | |||| ||||||    
T  48389147 tagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgc 48389081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 2126727 - 2126662
Alignment:
Q  20 aaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaat 85  Q
    ||||||||| ||||| |||||||| |||||||| |||||||| ||||   |||| |||||||||||    
T  2126727 aaaaatatggtcaaagtaaattaggtcaaaattacacatttttaaataagtcatctattgcggaat 2126662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 28490238 - 28490173
Alignment:
Q  17 tagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||||||||||| ||||| |||| ||  ||||||||||| |||||||||| | |||| ||||||||    
T  28490238 tagaaaaatatggtcaaagtaaactatgtcaaaattgcaaattttcaaataggtcatctattgcgg 28490173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 29253553 - 29253492
Alignment:
Q  21 aaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||||||| ||||| |||  ||| ||||||||||| |||||||||| |||||| ||||||||    
T  29253553 aaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatctattgcgg 29253492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 52688622 - 52688543
Alignment:
Q  1 ctttatatattagtagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||| ||||||| |||||||||||||   ||||| ||| |||| |||||||| ||||||||||||| |||||| ||||||||    
T  52688622 ctttgtatatta-tagtagaaaaatacagtcaaagtaagttaggtcaaaattccacattttcaaat-gatcatctattgcgg 52688543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 507442 - 507410
Alignment:
Q  2 tttatatattagtagtagaaaaatatgatcaaa 34  Q
    ||||||||||||||||| |||||||||||||||    
T  507442 tttatatattagtagtaaaaaaatatgatcaaa 507410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 4489142 - 4489074
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||  |||  ||||| ||||||||| |||||||||| |||| | ||||||||    
T  4489142 tagtagaaaaatatggtcaacgtaagctagattaaaattgcaaattttcaaatagatcgtctattgcgg 4489074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 31651888 - 31651956
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| |||   || | |||||||||||||||||||| | |||| ||||||||    
T  31651888 tagtagaaaaatatggtcaaattaagccaggttaaaattgcacattttcaaataggtcatttattgcgg 31651956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 40058956 - 40059024
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||| | ||||| ||| |||||||||||||  | | |||||||||| |||| ||||||||    
T  40058956 tagtagaaaaatacggtcaaagtaagttagatcaaaattaaaaaatttcaaatgggtcatctattgcgg 40059024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 41414284 - 41414232
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||||| ||||| |||  ||| ||||||||||| ||||||||||    
T  41414284 tagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaat 41414232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 41855708 - 41855760
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||||| ||||| |||  ||| ||||||||||| ||||||||||    
T  41855708 tagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaat 41855760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 44240600 - 44240532
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| |||  ||| ||||||||||| ||||| |||| | |||| ||||||||    
T  44240600 tagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaatttttaaataggtcatttattgcgg 44240532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 29821131 - 29821067
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  29821131 tagtagaaaaatatggtcaaagtaagttagatcaaaattgcacattttcaaatggatcatctatt 29821067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 42185355 - 42185287
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  42185355 tagtagaaaaatatggtcaaactaaattaggtcaaaattgcaaattttcaaatggatcatctattgcgg 42185287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 3708334 - 3708269
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattg 79  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||||  |||||| |||||    
T  3708334 tagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattg 3708269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 39171039 - 39170971
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||||||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  39171039 tagtagaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 39170971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 48336410 - 48336478
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||| ||||||| ||| |||| |||||||||||||||||||||||  |||| ||||||||    
T  48336410 tagtagaaaaatacgatcaaagtaagttaggtcaaaattgcacattttcaaatgtgtcatctattgcgg 48336478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 39332812 - 39332879
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcg 81  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||  |||||| |||||||    
T  39332812 tagtagaaaaatatggtcaaagtaagttagttcaaaattgcacattttcaaacagatcatttattgcg 39332879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 37667759 - 37667824
Alignment:
Q  17 tagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||||||||||| ||||| |||||||| |||||||||||||||||||||  | |||| ||||||||    
T  37667759 tagaaaaatatggtcaaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgg 37667824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 50685001 - 50684936
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattg 79  Q
    ||||||||||||||||||||| ||| |||||||||||||||| ||||| |||| ||| || |||||    
T  50685001 tagtagaaaaatatgatcaaagtaagttagatcaaaattgcatatttttaaatagattatctattg 50684936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 1613200 - 1613252
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||||| ||||| |||||||| |||||||| |||||||||||||    
T  1613200 tagtagaaaaatatggtcaaagtaaattaggtcaaaattacacattttcaaat 1613252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 23605884 - 23605952
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||||||||| |||  ||| ||||||||| | |||||||||| |||||| ||||||||    
T  23605884 tagtagaaaaatatgatcaaagtaagctaggtcaaaattgtaaattttcaaatagatcatttattgcgg 23605952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 43447246 - 43447182
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||  |||||| ||||    
T  43447246 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttatt 43447182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 55631857 - 55631925
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||| ||||||||| ||||||||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  55631857 tagtaaaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 55631925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 8525398 - 8525449
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||||||||| ||| |||| ||||||||||| |||||||||    
T  8525398 tagtagaaaaatatgatcaaagtaagttaggtcaaaattgcatattttcaaa 8525449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 31152742 - 31152691
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  31152742 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 31152691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 33394158 - 33394104
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatgg 68  Q
    ||||||||||||||| ||||| ||| |||| ||||||||||||||||| ||||||    
T  33394158 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacatttttaaatgg 33394104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 53987762 - 53987827
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattg 79  Q
    ||||||||||||||| ||||| ||| |||| | || |||||||||||| ||||||||||| |||||    
T  53987762 tagtagaaaaatatggtcaaagtaagttaggttaatattgcacatttttaaatggatcatctattg 53987827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 10384929 - 10384861
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| | ||| ||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  10384929 tagtagaaaaatatggttaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 10384861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 24334363 - 24334431
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||| ||||| ||||| |||| ||| ||||||||||| |||||||||| | |||| ||||||||    
T  24334363 tagtagaaatatatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctattgcgg 24334431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 28899053 - 28899121
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||| ||||| ||||| |||| ||| ||||||||||| |||||||||| | |||| ||||||||    
T  28899053 tagtagaaatatatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctattgcgg 28899121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 52818667 - 52818735
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||||||||||| || ||||| |||||||| | |||||| ||||||||||||||  |||| ||||||||    
T  52818667 tagtagaaaaatgtggtcaaagtaaattaggttaaaattacacattttcaaatgagtcatctattgcgg 52818735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 1981370 - 1981421
Alignment:
Q  20 aaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatc 71  Q
    ||||||||| ||||| ||| ||||||||||||| || |||||||||||||||    
T  1981370 aaaaatatggtcaaagtaagttagatcaaaattacaaattttcaaatggatc 1981421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 43047468 - 43047417
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||| | |||||||||||||||||||    
T  43047468 tagtagaaaaatatggtcaaagtaagttaggttaaaattgcacattttcaaa 43047417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 48380554 - 48380503
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||| |||||| ||||||||||||||    
T  48380554 tagtagaaaaatatggtcaaagtaagttaggtcaaaaatgcacattttcaaa 48380503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 40411597 - 40411642
Alignment:
Q  20 aaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  40411597 aaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 40411642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 47834126 - 47834179
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatg 67  Q
    ||||||||||||||| ||||| ||| |||  |||||||| ||||||||||||||    
T  47834126 tagtagaaaaatatggtcaaagtaagttatgtcaaaattacacattttcaaatg 47834179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 1377584 - 1377532
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||||| ||||| |||  ||| ||||||||||| ||||||||||    
T  1377584 tagtagaaaaatatggtcaaagtaagataggtcaaaattgcaaattttcaaat 1377532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 6520516 - 6520448
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||  ||||| |||  ||| ||||||||||| |||||||||| | |||| ||||||||    
T  6520516 tagtagaaaaatatagtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgg 6520448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 6829466 - 6829518
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||| | ||||| || |||||| ||| |||||||||||||||||    
T  6829466 tagtagaaaaatacggtcaaagtatattagaacaatattgcacattttcaaat 6829518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 28988376 - 28988444
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| |||| ||| |||| ||| || |||||||||| | |||| ||||||||    
T  28988376 tagtagaaaaatatggtcaaagtaaactaggtcaacattacaaattttcaaataggtcatctattgcgg 28988444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 31657338 - 31657406
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| |||  ||| ||||||||||| ||||| |||| | |||| ||||||||    
T  31657338 tagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaatttttaaataggtcatttattgcgg 31657406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 37164097 - 37164033
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||||||||  ||||| ||| |||| ||||||||| | |||||||||||| |||| ||||    
T  37164097 tagtagaaaaatatagtcaaagtaagttaggtcaaaattgtatattttcaaatgggtcatctatt 37164033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 46608294 - 46608226
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||| ||||||||| ||||| ||| |||| |||||||| ||||||||||||  | |||| ||||||||    
T  46608294 tagtataaaaatatggtcaaagtaagttaggtcaaaatttcacattttcaaacaggtcatttattgcgg 46608226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 8896352 - 8896281
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaat 85  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||||| |||| |||||||||||    
T  8896352 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatctattgcggaat 8896281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 43328783 - 43328849
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgc 80  Q
    ||||||||||||||| ||||| ||| |||||||||||||  ||||||||||||||||||| ||||||    
T  43328783 tagtagaaaaatatggtcaaagtaagttagatcaaaattatacattttcaaatggatcatctattgc 43328849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 8373515 - 8373447
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||  |||||| ||||||||    
T  8373515 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgg 8373447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 11277632 - 11277564
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||||||||| ||| |||  |||||||||||||||||||||| | |||| ||||||||    
T  11277632 tagtagaaaaatatgatcaaagtaagttatgtcaaaattgcacattttcaaataggtcatttattgcgg 11277564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 16126064 - 16126132
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||| |||||||||| ||||| ||| |||| |||||||||||||||||||||||| |||| ||||||||    
T  16126064 tagtggaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatttattgcgg 16126132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 4137490 - 4137440
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  4137490 tagtagaaaaatatgatcaaa-taaattagatcaaaattgtacattttcaaa 4137440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 16333556 - 16333493
Alignment:
Q  19 gaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||||||||| ||||| ||| |||| |||||||||||||||||||||||| |||| ||||||||    
T  16333556 gaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatttattgcgg 16333493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 2831788 - 2831720
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| |||||||| |||||||| ||||||||||| ||| ||||    
T  2831788 tagtagaaaaatatggtcaaagtaagttaggtcaaaattacacatttttaaatggatcatttatcgcgg 2831720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 7724593 - 7724661
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  7724593 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 7724661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 10333560 - 10333624
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||||||||| ||||||||| |||| |||||||| ||||||||||||  |||||| ||||    
T  10333560 tagtagaaaaatatggtcaaaataagttaggtcaaaattacacattttcaaacagatcatttatt 10333624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 12209070 - 12209002
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  12209070 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 12209002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 16127762 - 16127830
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||| |||||||||||||||| ||| |||| |||||||| ||||||||||||| | |||| ||||||||    
T  16127762 tagtggaaaaatatgatcaaagtaagttaggtcaaaattacacattttcaaataggtcatttattgcgg 16127830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 41575643 - 41575575
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||||||||| |||  ||| ||||||||||| |||||||||| | |||| ||||||||    
T  41575643 tagtagaaaaatatgatcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgg 41575575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 5096329 - 5096278
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||||||||||||| |||  ||||||||| |||||||||||    
T  5096329 tagtagaaaaatatgatcaaaataagttatgtcaaaattgtacattttcaaa 5096278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 37987918 - 37987969
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  37987918 tagtaaaaaaatatgatcaaagtaacttagatcaaaattgcgcattttcaaa 37987969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 38963876 - 38963825
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  38963876 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 38963825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 40471817 - 40471766
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||| ||||||||||||||||||| |||  |||||||||||||||||||||    
T  40471817 tagtaaaaaaatatgatcaaaataagttaagtcaaaattgcacattttcaaa 40471766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 11384027 - 11384073
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattt 60  Q
    ||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  11384027 tagtagaaaaatatgatcaaaataagttatatcaaaattacacattt 11384073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 26436668 - 26436733
Alignment:
Q  17 tagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||||||||||||||||||||| ||||||||||| | || |||||| ||||| |||| || |||||    
T  26436668 tagaaaaatatgatcaaaataagttagatcaaaagtacatattttccaatgggtcatctaatgcgg 26436733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 18504553 - 18504501
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||||| ||||||||| |||  |||||||| |||||||||||||    
T  18504553 tagtagaaaaatatggtcaaaataagttacgtcaaaattacacattttcaaat 18504501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 22718525 - 22718589
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||||||||| ||||| |||  ||| ||||||||||| |||||||||| |||||| ||||    
T  22718525 tagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatttatt 22718589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 31603398 - 31603449
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||  ||||| ||| |||| |||||||||||||||||||||    
T  31603398 tagtagaaaaatattgtcaaagtaagttaggtcaaaattgcacattttcaaa 31603449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 44022349 - 44022283
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgc 80  Q
    ||||||||||||||  ||||| ||| |||| | ||||||||||||||||||| | ||||| ||||||    
T  44022349 tagtagaaaaatatagtcaaagtaagttaggttaaaattgcacattttcaaacgaatcatctattgc 44022283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 15771067 - 15771116
Alignment:
Q  17 tagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    |||||||||| ||||||||||  ||||||||| | |||||||||||||||    
T  15771067 tagaaaaatacgatcaaaatatgttagatcaatagtgcacattttcaaat 15771116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 4890113 - 4890179
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgc 80  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||    
T  4890113 tagtagaaaaatatggtcaaagtaaattaggtcaaaattgcacatttttaaatggatcatctattgc 4890179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 24949616 - 24949548
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||| ||||| ||||||| ||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  24949616 tagtagataaatacgatcaaagtaagttagatcaaaattgcacattttcaaatgggtcatctattgcgg 24949548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 2397851 - 2397783
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||||||||  | |||| ||||||||    
T  2397851 tagtagaaaaatatggtcaaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgg 2397783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 16661589 - 16661657
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||| | ||||| ||| |||| |||||||| |||||||||||||||||||| ||||||||    
T  16661589 tagtagaaaaatacggtcaaagtaagttaggtcaaaattacacattttcaaatggatcatctattgcgg 16661657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 17496305 - 17496373
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||  |||||| ||||||||    
T  17496305 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgg 17496373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 28483119 - 28483051
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| | ||| ||| ||||||||||||||||||||||||||  |||||| ||||||||    
T  28483119 tagtagaaaaatatggttaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgcgg 28483051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 29795532 - 29795464
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| | ||| ||| ||||||||||||||||||||||||||  |||||| ||||||||    
T  29795532 tagtagaaaaatatggttaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgcgg 29795464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 32673829 - 32673765
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||||||||| ||||||||| |||||||||||||||| ||||| |||| |||||| ||||    
T  32673829 tagtagaaaaatatggtcaaaataagttagatcaaaattgcaaatttttaaatagatcatctatt 32673765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 6142494 - 6142545
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||||    
T  6142494 tagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 6142545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 29515013 - 29515064
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||||    
T  29515013 tagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 29515064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 10109398 - 10109467
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgga 83  Q
    |||||||||||||   ||||| ||| |||| ||||||||||||||||| ||||||||||| |||||||||    
T  10109398 tagtagaaaaataaagtcaaagtaagttaggtcaaaattgcacatttttaaatggatcatctattgcgga 10109467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 2667312 - 2667380
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||  ||||| ||| |||| |||||||||||||||||||||  |||||| ||||||||    
T  2667312 tagtagaaaaatatagtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgg 2667380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 12677061 - 12676989
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatc-aaaattgcacattttcaaatggatcatgtattgcggaat 85  Q
    ||||| ||||||||| ||||| ||||||||||| |||||| |||||||||||||| ||||| |||||| ||||    
T  12677061 tagtaaaaaaatatggtcaaagtaaattagatcaaaaattacacattttcaaatgaatcatctattgcagaat 12676989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 16969459 - 16969407
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||||| ||||| |||||||  ||||||||||||||||||||||    
T  16969459 tagtagaaaaatatggtcaaagtaaattaagtcaaaattgcacattttcaaat 16969407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 24798533 - 24798601
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  24798533 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 24798601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 32541464 - 32541532
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| |||||||| ||||||||||| |||||||||  | |||| ||||||||    
T  32541464 tagtagaaaaatatggtcaaagtaaattaggtcaaaattgcatattttcaaacaggtcatttattgcgg 32541532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 2141649 - 2141598
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||||||||| ||| |||| ||||||||| |||||||||||    
T  2141649 tagtagaaaaatatgatcaaagtaagttaggtcaaaattgtacattttcaaa 2141598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 24825246 - 24825195
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  24825246 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 24825195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 30699342 - 30699272
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    ||||||||||||||| ||||| ||| |||| |||||||| |||||||| |||  |||||| ||||||||||    
T  30699342 tagtagaaaaatatggtcaaagtaagttaggtcaaaattacacatttttaaacagatcatttattgcggaa 30699272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 31708974 - 31708908
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgc 80  Q
    ||||||||||||| | ||||| |||||||  ||||||||||||||||| |||| |||||| ||||||    
T  31708974 tagtagaaaaatacggtcaaagtaaattaagtcaaaattgcacatttttaaatagatcatctattgc 31708908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 31948634 - 31948695
Alignment:
Q  20 aaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcg 81  Q
    ||||||||| ||||||||| |||  ||| |||| |||||||||||||||||||| |||||||    
T  31948634 aaaaatatggtcaaaataagttaagtcataattacacattttcaaatggatcatctattgcg 31948695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 2656657 - 2656725
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||  ||||| ||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  2656657 tagtagaaaaatatagtcaaagtaagttaggtcaaaattgcacattttcaaacagctcatttattgcgg 2656725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 6188643 - 6188694
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||| ||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  6188643 tagtaaaaaaatatgctcaaagtaagttaggtcaaaattgcacattttcaaa 6188694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 5842198 - 5842142
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggat 70  Q
    ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  5842198 tagtataaaaatatgatcaaagtaaattagattaaaattgcacattttcaaatggat 5842142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 36819699 - 36819627
Alignment:
Q  12 agtagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||||||||  | |||| ||||||||||    
T  36819699 agtagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcggaa 36819627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 28016196 - 28016137
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcat 73  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| ||||    
T  28016196 tagtagaaaaatatggtcaaagtaagttagatcaaaattgcacattttcaaatgggtcat 28016137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 38259563 - 38259492
Alignment:
Q  16 gtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaatag 87  Q
    ||||||||||||||||||| ||||||||||| |||||||| |||||||| | |||||| |||||||| ||||    
T  38259563 gtagaaaaatatgatcaaagtaaattagatcgaaattgcaaattttcaactagatcatctattgcgggatag 38259492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 40232009 - 40231958
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  40232009 tagtagaaaaatatggtcaaaataaattaggtcaaaattgcacattttcaaa 40231958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 9136648 - 9136713
Alignment:
Q  17 tagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||||||||||| |||||||||| ||| |||||||| |||||| ||||||||||||| ||||||||    
T  9136648 tagaaaaatatggtcaaaataaactaggtcaaaattacacattatcaaatggatcatctattgcgg 9136713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 40818680 - 40818744
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||||||||||| ||| | ||| ||||||||||||||||||||||||||| |||||| ||||    
T  40818680 tagtagaaaaatatggtcagagtaagttagatcaaaattgcacattttcaaatagatcatctatt 40818744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 38069132 - 38069062
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||  | |||| ||||||||||    
T  38069132 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcggaa 38069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 38353581 - 38353647
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgc 80  Q
    |||||||||||||| |||||| |||||||||||||||||  | ||||| ||||||||||| ||||||    
T  38353581 tagtagaaaaatataatcaaactaaattagatcaaaattataaatttttaaatggatcatctattgc 38353647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 36404909 - 36404961
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    |||||||||||||  |||||||||  |||||||||||||||||||||||||||    
T  36404909 tagtagaaaaatacaatcaaaatacgttagatcaaaattgcacattttcaaat 36404961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 16807129 - 16807180
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  16807129 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 16807180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 32222628 - 32222561
Alignment:
Q  17 tagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    |||||||||| ||| ||| |||||||||||||||||||||||||| | |||| |||| |||| |||||    
T  32222628 tagaaaaatacgattaaagtaaattagatcaaaattgcacattttgagatgggtcatctattacggaa 32222561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 25274000 - 25274066
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgc 80  Q
    |||||||||| |||| ||||| ||| |||| |||||||||||||||||||||  |||||| ||||||    
T  25274000 tagtagaaaattatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgc 25274066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 38850783 - 38850713
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    |||| |||||||||| ||||| ||| |||| |||||||| ||||||||||||||| |||| ||||| ||||    
T  38850783 tagtggaaaaatatggtcaaagtaagttaggtcaaaattacacattttcaaatgggtcatctattgtggaa 38850713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 37101012 - 37101077
Alignment:
Q  17 tagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    |||||||||||| ||||| ||| |||| |||||||| ||||||||||||| | |||| ||||||||    
T  37101012 tagaaaaatatggtcaaagtaagttaggtcaaaattacacattttcaaataggtcatctattgcgg 37101077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 30462204 - 30462272
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||| ||||||||| ||||| ||| |||  |||||||||||||||||||||  |||||| ||||||||    
T  30462204 tagtaaaaaaatatggtcaaagtaagttaagtcaaaattgcacattttcaaacagatcatttattgcgg 30462272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 39173916 - 39173848
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||| ||||||||  ||||| ||||||||||||||||| || ||||| |||||| |||| ||||||||    
T  39173916 tagtacaaaaatatagtcaaagtaaattagatcaaaattacatatttttaaatgggtcatctattgcgg 39173848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 35693813 - 35693864
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| || || ||| |||| |||||||||||||||||||||    
T  35693813 tagtagaaaaatatggtcgaagtaagttaggtcaaaattgcacattttcaaa 35693864  T

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Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 46242469 - 46242516
Alignment:
Q  20 aaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatg 67  Q
    ||||||||| ||||| ||| |||| |||||||||||||||||||||||    
T  46242469 aaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaatg 46242516  T

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Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 3124129 - 3124195
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgc 80  Q
    |||||||||||||   ||||| | ||||||||||||||| ||||||||||||||  |||| ||||||    
T  3124129 tagtagaaaaatacagtcaaagtcaattagatcaaaattacacattttcaaatgagtcatctattgc 3124195  T

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Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 18756680 - 18756610
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    ||||||||||||||  ||||| |||  ||| ||||||||||| |||||||||||| |||| |||| |||||    
T  18756680 tagtagaaaaatatagtcaaagtaagataggtcaaaattgcatattttcaaatgggtcatctattacggaa 18756610  T

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Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 47713421 - 47713479
Alignment:
Q  20 aaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtatt 78  Q
    ||||||| | ||||| ||| |||| |||||||||||||||||||||||| |||| ||||    
T  47713421 aaaaatacggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatctatt 47713479  T

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Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 38441894 - 38441841
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatg 67  Q
    ||||||||||||||| ||||| ||| |||| | |||||| ||||||||||||||    
T  38441894 tagtagaaaaatatggtcaaagtaagttaggtaaaaattacacattttcaaatg 38441841  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 32972310 - 32972378
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| |||  ||| ||||| ||||| |||||||||| | |||| ||||||||    
T  32972310 tagtagaaaaatatggtcaaagtaagctaggtcaaacttgcaaattttcaaataggtcatctattgcgg 32972378  T

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Target: scaffold0717 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 4171 - 4241
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcggaa 84  Q
    ||||||||||||||||||||| ||||||| |||||||||  ||||||| ||||| ||||| ||||||||||    
T  4171 tagtagaaaaatatgatcaaattaaattatatcaaaattatacatttttaaatgaatcatctattgcggaa 4241  T

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Target: scaffold0500 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 658 - 726
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| ||||||||||| |||||||||||| |||| ||||||||    
T  658 tagtagaaaaatatggtcaaactaagttaggtcaaaattgcatattttcaaatgggtcatctattgcgg 726  T

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Target: scaffold0204 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 23932 - 24000
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||| ||||||| ||| |||| |||||||||||||||||||||||  |||| ||||||||    
T  23932 tagtagaaaaatacgatcaaagtaagttaggtcaaaattgcacattttcaaatgtgtcatctattgcgg 24000  T

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Target: scaffold0283 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 3073 - 3007
Alignment:
Q  17 tagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgga 83  Q
    ||||||||||| |||||| |||| ||| ||||||||||||||||| |||||| |||| |||||||||    
T  3073 tagaaaaatataatcaaagtaaaataggtcaaaattgcacatttttaaatgggtcatctattgcgga 3007  T

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Target: scaffold0069 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 4522 - 4456
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgc 80  Q
    ||||||||||||| | ||||||||| |||| ||||||||||||||||| ||||| ||||| ||||||    
T  4522 tagtagaaaaatacggtcaaaataagttaggtcaaaattgcacatttttaaatgaatcatttattgc 4456  T

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Target: scaffold0221 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 5457 - 5389
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaatggatcatgtattgcgg 82  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||  | |||| ||||||||    
T  5457 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 5389  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 184047 - 183996
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaa 65  Q
    ||||||||||||||| ||||| ||| |||| |||||||||||||||||||||    
T  184047 tagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 183996  T

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Target: scaffold0289 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 9190 - 9157
Alignment:
Q  40 ttagatcaaaattgcacattttcaaatggatcat 73  Q
    ||||||||||||||||||||||||||||||||||    
T  9190 ttagatcaaaattgcacattttcaaatggatcat 9157  T

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Target: scaffold0373 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 6954 - 6902
Alignment:
Q  14 tagtagaaaaatatgatcaaaataaattagatcaaaattgcacattttcaaat 66  Q
    ||||||||||||| | ||||| || |||||| ||| |||||||||||||||||    
T  6954 tagtagaaaaatacggtcaaagtatattagaacaatattgcacattttcaaat 6902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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