View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9613_low_10 (Length: 291)
Name: NF9613_low_10
Description: NF9613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9613_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 48961456 - 48961179
Alignment:
| Q |
1 |
cagattcaccaccatcaactttgattgtgttccccttcttgtgaagataattgggttggtgtttcttttgggattgaactagttccatataggctcctct |
100 |
Q |
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| T |
48961456 |
cagattcaccaccgtcaactttgattgtgttccccttcttgtgaagataattgggttggtgtttcttttgggattgaactagttccatataggctcctct |
48961357 |
T |
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| Q |
101 |
gttttcccctgcaattgttatcactctcatgccagagtcctcagaatctgaaaactttttctccttgctggattctcttcctttcacagtaatgtgtttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48961356 |
gttttcccctgcaattgttatcactctcatgccagagtcctcagaatctgaaaactttttctccttgctggattctcttcctttcacagtaatgtgtttt |
48961257 |
T |
|
| Q |
201 |
ccatgatgggaagaattgctgtgattttgagtctgcctatggaattcaccattgctgtgattttgattctccctatgc |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48961256 |
ccatgatgggaagaattgctgtgattttgagtctgcctatggaattcaccattgctgtgattttgattctccctatgc |
48961179 |
T |
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