View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9615_low_23 (Length: 248)
Name: NF9615_low_23
Description: NF9615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9615_low_23 |
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Alignment Details
Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 2 - 240
Target Start/End: Complemental strand, 8629072 - 8628842
Alignment:
| Q |
2 |
taacaaggtttttattagaaaaattcgtaactgtgaacaaaaaatttattacctattattcaaccaaactagaagcttcaacaaatagattcgaaaaatt |
101 |
Q |
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| T |
8629072 |
taacaaggtttttattagaaaaagtcgtaactgtaaacaaaaaatttattacctattattcaaccaaactagaagcttcagcaaatagattcgaaaaatt |
8628973 |
T |
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| Q |
102 |
gattgttgtaaatattagacctaaaatgcagggtgttagaatcaaattaacatggttaaaattaaaaataaaattgatatgatatgtacatttttaagct |
201 |
Q |
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| T |
8628972 |
g----ttgtaaatattagacctaaaatgcagggtgttagaatcaaattaacatggttaaaattaaaaataaaattgatatgatatgtacatttttaagc- |
8628878 |
T |
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| Q |
202 |
acgtaccttgttttatttaaacttggtcatttacctttg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
8628877 |
---taccttgttttatttaaacttggtcatttacctttg |
8628842 |
T |
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