View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9617_low_19 (Length: 248)

Name: NF9617_low_19
Description: NF9617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9617_low_19
NF9617_low_19
[»] chr8 (57 HSPs)
chr8 (107-248)||(18660768-18660917)
chr8 (107-248)||(22977783-22977932)
chr8 (13-103)||(1651928-1652018)
chr8 (13-103)||(1740304-1740394)
chr8 (13-104)||(15048756-15048847)
chr8 (13-108)||(45276595-45276690)
chr8 (4-106)||(1646501-1646603)
chr8 (4-106)||(1646854-1646956)
chr8 (13-106)||(33819785-33819878)
chr8 (13-106)||(37569314-37569407)
chr8 (13-101)||(11173991-11174079)
chr8 (14-106)||(15048399-15048491)
chr8 (20-106)||(11920136-11920222)
chr8 (13-102)||(1739952-1740041)
chr8 (13-101)||(1432136-1432224)
chr8 (4-108)||(15871619-15871723)
chr8 (16-108)||(34470904-34470996)
chr8 (20-108)||(45077219-45077307)
chr8 (13-116)||(27473063-27473165)
chr8 (13-87)||(27669435-27669509)
chr8 (13-103)||(40660243-40660333)
chr8 (13-106)||(7535190-7535283)
chr8 (13-106)||(22763290-22763383)
chr8 (13-106)||(27473428-27473521)
chr8 (13-106)||(33296041-33296134)
chr8 (13-106)||(45276953-45277046)
chr8 (4-108)||(15871969-15872073)
chr8 (13-76)||(5152891-5152954)
chr8 (13-107)||(5435257-5435351)
chr8 (4-106)||(45077551-45077653)
chr8 (13-106)||(1870292-1870385)
chr8 (13-82)||(38588611-38588680)
chr8 (13-82)||(38588944-38589013)
chr8 (4-108)||(40659981-40660085)
chr8 (13-104)||(5434902-5434993)
chr8 (13-116)||(11707740-11707843)
chr8 (13-105)||(5152536-5152627)
chr8 (13-101)||(7949417-7949505)
chr8 (32-112)||(15741608-15741688)
chr8 (14-82)||(44594959-44595027)
chr8 (20-111)||(24666042-24666133)
chr8 (13-82)||(1869957-1870026)
chr8 (13-107)||(22762512-22762606)
chr8 (32-106)||(24652823-24652897)
chr8 (13-110)||(7534838-7534935)
chr8 (32-108)||(12643892-12643968)
chr8 (16-103)||(33295739-33295826)
chr8 (14-108)||(15740611-15740705)
chr8 (32-82)||(27669796-27669846)
chr8 (18-82)||(33819975-33820039)
chr8 (24-103)||(44594604-44594683)
chr8 (13-103)||(40048411-40048501)
chr8 (32-107)||(40048066-40048141)
chr8 (47-106)||(11920076-11920135)
chr8 (33-106)||(29770376-29770449)
chr8 (42-82)||(33098611-33098651)
chr8 (42-82)||(45123609-45123649)
[»] chr7 (65 HSPs)
chr7 (4-106)||(6356633-6356735)
chr7 (4-108)||(35146697-35146801)
chr7 (16-103)||(6356289-6356376)
chr7 (13-108)||(7578870-7578965)
chr7 (13-108)||(21391547-21391642)
chr7 (4-106)||(21391190-21391292)
chr7 (13-106)||(10526311-10526404)
chr7 (13-106)||(10526667-10526760)
chr7 (16-105)||(36673976-36674065)
chr7 (13-112)||(1114402-1114501)
chr7 (15-101)||(1114059-1114145)
chr7 (16-106)||(6356765-6356855)
chr7 (4-106)||(48626063-48626165)
chr7 (16-105)||(19681496-19681585)
chr7 (13-82)||(33716612-33716681)
chr7 (13-106)||(41453005-41453098)
chr7 (13-109)||(17749932-17750028)
chr7 (13-101)||(41453362-41453450)
chr7 (16-106)||(4155598-4155688)
chr7 (13-111)||(6357122-6357220)
chr7 (4-106)||(8416485-8416587)
chr7 (13-107)||(31638300-31638394)
chr7 (13-106)||(8542499-8542592)
chr7 (13-106)||(8936849-8936942)
chr7 (13-82)||(17359205-17359274)
chr7 (13-106)||(31075550-31075643)
chr7 (13-82)||(36423726-36423795)
chr7 (13-106)||(44332876-44332969)
chr7 (13-101)||(4931630-4931718)
chr7 (14-106)||(16867707-16867799)
chr7 (13-104)||(8542855-8542946)
chr7 (14-109)||(41891963-41892058)
chr7 (16-106)||(19681855-19681945)
chr7 (13-106)||(28286117-28286210)
chr7 (4-101)||(41192033-41192130)
chr7 (9-82)||(41752003-41752076)
chr7 (13-82)||(43247439-43247508)
chr7 (14-106)||(48626421-48626513)
chr7 (14-101)||(35147047-35147134)
chr7 (14-109)||(41751647-41751742)
chr7 (13-103)||(31637946-31638036)
chr7 (13-82)||(7909523-7909592)
chr7 (13-101)||(7579229-7579317)
chr7 (13-101)||(28286474-28286562)
chr7 (15-82)||(17363595-17363662)
chr7 (13-108)||(36282784-36282879)
chr7 (16-82)||(7909310-7909376)
chr7 (20-106)||(29277707-29277793)
chr7 (11-101)||(34037266-34037356)
chr7 (13-82)||(28297843-28297912)
chr7 (13-108)||(8417293-8417388)
chr7 (4-82)||(8937197-8937275)
chr7 (13-87)||(36423388-36423462)
chr7 (20-104)||(29276877-29276961)
chr7 (13-107)||(41191682-41191775)
chr7 (13-82)||(27739021-27739090)
chr7 (32-82)||(36283581-36283632)
chr7 (20-106)||(36674095-36674179)
chr7 (13-87)||(28298176-28298250)
chr7 (16-73)||(32946701-32946758)
chr7 (13-78)||(33716940-33717005)
chr7 (46-106)||(36423790-36423850)
chr7 (32-82)||(28263520-28263570)
chr7 (32-82)||(41893451-41893501)
chr7 (32-106)||(38677054-38677128)
[»] chr5 (35 HSPs)
chr5 (4-108)||(38958722-38958826)
chr5 (13-106)||(38959080-38959173)
chr5 (13-106)||(9989323-9989416)
chr5 (4-104)||(35569777-35569877)
chr5 (4-104)||(39325414-39325514)
chr5 (13-108)||(1140122-1140217)
chr5 (13-103)||(25183010-25183100)
chr5 (13-104)||(24040087-24040178)
chr5 (13-112)||(39325712-39325811)
chr5 (13-114)||(27185866-27185967)
chr5 (13-106)||(36440557-36440650)
chr5 (4-78)||(11316302-11316376)
chr5 (4-106)||(27186221-27186323)
chr5 (16-105)||(19184598-19184687)
chr5 (4-105)||(32288079-32288180)
chr5 (13-106)||(36440200-36440293)
chr5 (4-113)||(37424255-37424364)
chr5 (14-82)||(11315982-11316050)
chr5 (13-107)||(16860302-16860396)
chr5 (4-79)||(9989671-9989746)
chr5 (13-82)||(2182967-2183036)
chr5 (16-101)||(32288436-32288521)
chr5 (13-101)||(37424622-37424709)
chr5 (13-107)||(24040444-24040538)
chr5 (13-82)||(2183300-2183369)
chr5 (37-108)||(19128434-19128505)
chr5 (13-114)||(34264705-34264810)
chr5 (20-103)||(31756666-31756749)
chr5 (32-82)||(25567364-25567414)
chr5 (32-82)||(33817660-33817710)
chr5 (13-72)||(34264396-34264455)
chr5 (4-106)||(19185532-19185634)
chr5 (13-82)||(35570137-35570206)
chr5 (13-106)||(29198954-29199045)
chr5 (42-82)||(6157160-6157200)
[»] scaffold0115 (2 HSPs)
scaffold0115 (13-112)||(22510-22609)
scaffold0115 (13-106)||(21512-21605)
[»] chr4 (85 HSPs)
chr4 (13-108)||(44991277-44991372)
chr4 (4-112)||(53751250-53751358)
chr4 (13-106)||(15477645-15477738)
chr4 (13-108)||(15478002-15478097)
chr4 (13-108)||(39448845-39448940)
chr4 (4-106)||(25269348-25269450)
chr4 (4-105)||(53750903-53751004)
chr4 (15-107)||(38339851-38339943)
chr4 (13-108)||(8592326-8592421)
chr4 (13-104)||(43566380-43566471)
chr4 (4-103)||(43734289-43734388)
chr4 (13-104)||(50769178-50769269)
chr4 (4-106)||(6505537-6505639)
chr4 (14-104)||(52557089-52557179)
chr4 (13-106)||(624036-624129)
chr4 (13-106)||(8591969-8592062)
chr4 (13-106)||(14985331-14985424)
chr4 (13-106)||(16038151-16038244)
chr4 (13-102)||(42855343-42855432)
chr4 (13-106)||(42855696-42855789)
chr4 (13-106)||(50768821-50768914)
chr4 (13-106)||(53995292-53995385)
chr4 (13-108)||(38339490-38339585)
chr4 (13-112)||(44991635-44991734)
chr4 (13-107)||(8398030-8398124)
chr4 (16-106)||(12817806-12817896)
chr4 (4-106)||(16037794-16037896)
chr4 (4-106)||(19088689-19088791)
chr4 (4-82)||(20888167-20888245)
chr4 (4-82)||(44957413-44957491)
chr4 (4-106)||(46849669-46849771)
chr4 (13-107)||(53994933-53995027)
chr4 (4-106)||(55022284-55022386)
chr4 (13-106)||(4513273-4513366)
chr4 (13-82)||(6711987-6712056)
chr4 (4-101)||(41752164-41752260)
chr4 (13-106)||(44125827-44125920)
chr4 (4-112)||(21763529-21763637)
chr4 (13-101)||(24898194-24898282)
chr4 (13-105)||(30683527-30683619)
chr4 (13-109)||(44957714-44957810)
chr4 (13-101)||(53259495-53259583)
chr4 (4-111)||(1433619-1433726)
chr4 (15-78)||(30683887-30683950)
chr4 (13-104)||(39448490-39448581)
chr4 (4-106)||(14985679-14985781)
chr4 (13-106)||(12818163-12818256)
chr4 (23-108)||(21763178-21763263)
chr4 (13-106)||(24898546-24898639)
chr4 (13-106)||(25182169-25182262)
chr4 (13-82)||(36122790-36122858)
chr4 (17-106)||(41877860-41877949)
chr4 (13-82)||(43734643-43734712)
chr4 (16-101)||(46850029-46850114)
chr4 (13-106)||(47603718-47603811)
chr4 (13-105)||(1433272-1433364)
chr4 (13-101)||(23756157-23756245)
chr4 (16-103)||(19088344-19088431)
chr4 (13-108)||(19508411-19508505)
chr4 (13-108)||(33091451-33091546)
chr4 (4-115)||(47602934-47603045)
chr4 (14-108)||(23755416-23755510)
chr4 (32-106)||(41751818-41751891)
chr4 (4-106)||(41878206-41878308)
chr4 (13-106)||(25181812-25181905)
chr4 (13-82)||(49135994-49136063)
chr4 (13-82)||(52692048-52692117)
chr4 (14-106)||(623679-623771)
chr4 (18-106)||(31214162-31214250)
chr4 (32-104)||(36122435-36122507)
chr4 (13-101)||(52557444-52557532)
chr4 (20-106)||(6712326-6712411)
chr4 (16-107)||(37206787-37206878)
chr4 (13-108)||(52692797-52692891)
chr4 (16-78)||(50508817-50508879)
chr4 (13-74)||(19508770-19508831)
chr4 (13-82)||(33091810-33091879)
chr4 (13-104)||(44125624-44125715)
chr4 (20-82)||(55022424-55022486)
chr4 (13-70)||(43566735-43566792)
chr4 (16-113)||(37206421-37206517)
chr4 (4-60)||(53259184-53259240)
chr4 (13-51)||(50508512-50508550)
chr4 (42-82)||(20614139-20614179)
chr4 (42-82)||(56270568-56270608)
[»] chr3 (89 HSPs)
chr3 (4-111)||(10506296-10506403)
chr3 (13-106)||(54107902-54107995)
chr3 (13-121)||(24428924-24429031)
chr3 (13-107)||(54108259-54108353)
chr3 (13-110)||(26318178-26318275)
chr3 (13-106)||(39664184-39664277)
chr3 (13-108)||(22201973-22202068)
chr3 (13-106)||(4757850-4757943)
chr3 (13-106)||(5900423-5900516)
chr3 (4-101)||(39241363-39241460)
chr3 (13-106)||(51509119-51509212)
chr3 (14-106)||(26318540-26318632)
chr3 (16-108)||(44317575-44317667)
chr3 (13-108)||(15986591-15986686)
chr3 (16-106)||(18464816-18464906)
chr3 (4-82)||(27801513-27801591)
chr3 (4-106)||(27801837-27801939)
chr3 (4-106)||(28986489-28986591)
chr3 (13-107)||(45307049-45307143)
chr3 (16-106)||(53716653-53716743)
chr3 (13-106)||(1994169-1994262)
chr3 (13-106)||(1999328-1999421)
chr3 (13-106)||(4773243-4773336)
chr3 (13-106)||(5900780-5900873)
chr3 (13-106)||(21569102-21569195)
chr3 (4-104)||(1994516-1994616)
chr3 (13-105)||(16931963-16932055)
chr3 (13-117)||(44893729-44893833)
chr3 (13-101)||(47669264-47669352)
chr3 (13-108)||(12791533-12791628)
chr3 (4-107)||(42591783-42591886)
chr3 (4-107)||(45306831-45306934)
chr3 (13-108)||(47669616-47669711)
chr3 (13-103)||(10505951-10506041)
chr3 (4-82)||(18464480-18464558)
chr3 (13-107)||(28985508-28985602)
chr3 (13-103)||(44894097-44894187)
chr3 (16-106)||(49528149-49528239)
chr3 (13-106)||(4757494-4757587)
chr3 (13-102)||(11256460-11256549)
chr3 (13-106)||(32633422-32633515)
chr3 (13-82)||(53716318-53716387)
chr3 (13-113)||(47303373-47303473)
chr3 (16-103)||(13866023-13866110)
chr3 (13-108)||(21568744-21568839)
chr3 (13-104)||(29818534-29818625)
chr3 (13-104)||(54752520-54752611)
chr3 (4-82)||(8473870-8473948)
chr3 (4-106)||(12203551-12203653)
chr3 (4-106)||(24428567-24428669)
chr3 (13-107)||(39664541-39664635)
chr3 (16-101)||(8474206-8474291)
chr3 (13-82)||(12203908-12203977)
chr3 (13-82)||(19883597-19883666)
chr3 (4-101)||(29818182-29818279)
chr3 (13-106)||(42592141-42592234)
chr3 (13-101)||(21969634-21969722)
chr3 (13-101)||(21992070-21992158)
chr3 (13-101)||(22201621-22201709)
chr3 (13-113)||(54752156-54752256)
chr3 (4-106)||(4773590-4773692)
chr3 (13-107)||(15986234-15986328)
chr3 (13-82)||(7163474-7163543)
chr3 (13-106)||(11256103-11256196)
chr3 (32-101)||(15790684-15790753)
chr3 (13-106)||(22151845-22151938)
chr3 (13-82)||(46152639-46152708)
chr3 (13-78)||(7681480-7681546)
chr3 (13-106)||(16931606-16931699)
chr3 (4-106)||(20963573-20963675)
chr3 (13-71)||(41834961-41835019)
chr3 (4-106)||(22152193-22152297)
chr3 (13-106)||(39951357-39951450)
chr3 (13-106)||(47303019-47303112)
chr3 (20-106)||(30681781-30681867)
chr3 (13-78)||(46152967-46153032)
chr3 (4-81)||(51509467-51509543)
chr3 (13-101)||(41835283-41835371)
chr3 (20-115)||(42853236-42853331)
chr3 (4-104)||(21969977-21970079)
chr3 (4-104)||(21992413-21992515)
chr3 (20-106)||(30681029-30681115)
chr3 (11-82)||(43839984-43840055)
chr3 (11-82)||(43844390-43844461)
chr3 (4-82)||(49529104-49529182)
chr3 (13-82)||(15791466-15791530)
chr3 (11-82)||(13866955-13867026)
chr3 (32-82)||(44316651-44316701)
chr3 (42-82)||(967004-967044)
[»] chr1 (74 HSPs)
chr1 (13-108)||(27547667-27547762)
chr1 (13-105)||(44323017-44323109)
chr1 (13-107)||(1762673-1762767)
chr1 (13-106)||(8762756-8762849)
chr1 (4-111)||(37576529-37576636)
chr1 (4-103)||(49643674-49643773)
chr1 (4-106)||(12481407-12481509)
chr1 (13-107)||(16023896-16023990)
chr1 (13-106)||(12127057-12127150)
chr1 (13-106)||(16024254-16024347)
chr1 (13-106)||(23476698-23476791)
chr1 (15-103)||(20306005-20306093)
chr1 (13-108)||(38000487-38000582)
chr1 (13-107)||(27548026-27548120)
chr1 (13-106)||(1763031-1763124)
chr1 (13-106)||(26707196-26707289)
chr1 (16-101)||(35612442-35612527)
chr1 (13-106)||(37304028-37304121)
chr1 (13-106)||(49140143-49140236)
chr1 (13-105)||(12481060-12481152)
chr1 (4-108)||(37467568-37467672)
chr1 (16-106)||(8760272-8760362)
chr1 (13-107)||(23476340-23476434)
chr1 (4-106)||(46593579-46593680)
chr1 (13-106)||(3089342-3089435)
chr1 (16-105)||(38127710-38127799)
chr1 (13-106)||(45053046-45053139)
chr1 (4-107)||(31703961-31704064)
chr1 (4-103)||(35612085-35612184)
chr1 (20-107)||(37576180-37576267)
chr1 (4-82)||(2064559-2064637)
chr1 (4-82)||(4696906-4696984)
chr1 (20-110)||(13109191-13109281)
chr1 (13-106)||(23598072-23598165)
chr1 (4-101)||(25995789-25995886)
chr1 (13-82)||(34967079-34967148)
chr1 (13-82)||(37304385-37304454)
chr1 (13-101)||(6798164-6798252)
chr1 (13-101)||(45843474-45843562)
chr1 (16-103)||(9006194-9006281)
chr1 (27-106)||(10831131-10831210)
chr1 (20-111)||(32047738-32047829)
chr1 (15-106)||(49644029-49644120)
chr1 (13-111)||(26723158-26723256)
chr1 (4-106)||(45052690-45052792)
chr1 (4-101)||(34966308-34966405)
chr1 (13-82)||(39486226-39486295)
chr1 (13-101)||(10831943-10832031)
chr1 (4-108)||(49140491-49140594)
chr1 (14-101)||(4330195-4330282)
chr1 (20-79)||(4697163-4697222)
chr1 (13-108)||(37285084-37285179)
chr1 (4-82)||(5537152-5537230)
chr1 (20-110)||(13183762-13183852)
chr1 (13-103)||(37585696-37585786)
chr1 (13-106)||(9006547-9006640)
chr1 (13-82)||(37284752-37284821)
chr1 (13-104)||(6797809-6797900)
chr1 (4-106)||(20306350-20306452)
chr1 (14-82)||(12127411-12127482)
chr1 (16-101)||(37586053-37586138)
chr1 (20-103)||(28884020-28884103)
chr1 (32-82)||(5536422-5536472)
chr1 (33-103)||(46289327-46289397)
chr1 (4-101)||(46592817-46592914)
chr1 (26-107)||(49838756-49838836)
chr1 (13-60)||(31703660-31703707)
chr1 (32-87)||(39486568-39486623)
chr1 (32-104)||(28884799-28884871)
chr1 (32-104)||(32048558-32048630)
chr1 (13-60)||(49837417-49837464)
chr1 (32-77)||(37466831-37466876)
chr1 (59-108)||(45843318-45843366)
chr1 (42-82)||(52179365-52179405)
[»] scaffold0220 (1 HSPs)
scaffold0220 (15-116)||(20740-20842)
[»] chr6 (64 HSPs)
chr6 (13-107)||(2517359-2517453)
chr6 (16-114)||(17244656-17244754)
chr6 (13-101)||(5938170-5938258)
chr6 (4-104)||(32753521-32753621)
chr6 (13-104)||(6137734-6137825)
chr6 (13-108)||(35167488-35167583)
chr6 (4-106)||(3423170-3423272)
chr6 (4-106)||(9046434-9046536)
chr6 (13-103)||(34994383-34994473)
chr6 (13-112)||(18053310-18053409)
chr6 (4-106)||(6137379-6137480)
chr6 (4-82)||(18052980-18053058)
chr6 (4-106)||(34890992-34891093)
chr6 (13-106)||(21856555-21856648)
chr6 (14-101)||(2517007-2517094)
chr6 (4-103)||(5937816-5937915)
chr6 (13-104)||(15932913-15933004)
chr6 (13-104)||(25176665-25176756)
chr6 (13-120)||(32993372-32993479)
chr6 (4-107)||(34994728-34994831)
chr6 (13-111)||(6532187-6532285)
chr6 (13-106)||(978415-978508)
chr6 (13-106)||(7270986-7271079)
chr6 (13-106)||(15932730-15932823)
chr6 (13-106)||(21856912-21857005)
chr6 (13-110)||(32753173-32753270)
chr6 (16-108)||(9046084-9046176)
chr6 (16-108)||(26957321-26957413)
chr6 (13-104)||(5311183-5311274)
chr6 (13-104)||(10412858-10412949)
chr6 (27-106)||(25180219-25180298)
chr6 (13-108)||(34518049-34518144)
chr6 (32-114)||(6228722-6228804)
chr6 (13-103)||(14276402-14276492)
chr6 (22-108)||(31238113-31238198)
chr6 (22-108)||(31247482-31247568)
chr6 (13-106)||(6235921-6236014)
chr6 (13-82)||(7269975-7270044)
chr6 (13-106)||(7438804-7438897)
chr6 (13-106)||(34517272-34517365)
chr6 (13-106)||(34890644-34890737)
chr6 (14-82)||(5639531-5639599)
chr6 (13-101)||(29260536-29260624)
chr6 (13-101)||(31237751-31237839)
chr6 (15-82)||(24744352-24744419)
chr6 (14-104)||(6236279-6236369)
chr6 (13-106)||(21540334-21540428)
chr6 (16-106)||(26600357-26600447)
chr6 (4-82)||(26600695-26600773)
chr6 (4-113)||(5310819-5310928)
chr6 (13-101)||(31247121-31247209)
chr6 (13-104)||(32993017-32993108)
chr6 (4-82)||(29261299-29261377)
chr6 (13-106)||(7270310-7270403)
chr6 (32-101)||(15286350-15286419)
chr6 (34-106)||(35167833-35167905)
chr6 (13-60)||(3035926-3035973)
chr6 (32-107)||(24744697-24744771)
chr6 (20-107)||(27829329-27829415)
chr6 (4-107)||(6229671-6229773)
chr6 (14-53)||(26957015-26957054)
chr6 (13-78)||(34251582-34251645)
chr6 (32-112)||(1158582-1158662)
chr6 (42-82)||(22498408-22498448)
[»] scaffold0029 (2 HSPs)
scaffold0029 (13-106)||(72762-72855)
scaffold0029 (13-106)||(73118-73211)
[»] chr2 (51 HSPs)
chr2 (4-106)||(7495980-7496082)
chr2 (4-110)||(38333028-38333134)
chr2 (13-106)||(15405756-15405849)
chr2 (13-106)||(24371967-24372060)
chr2 (4-112)||(13192982-13193090)
chr2 (13-112)||(8173879-8173978)
chr2 (14-101)||(15744462-15744549)
chr2 (13-106)||(17032593-17032686)
chr2 (13-106)||(24138068-24138161)
chr2 (4-109)||(34735691-34735796)
chr2 (13-105)||(12860381-12860473)
chr2 (13-105)||(26181701-26181793)
chr2 (14-113)||(15406114-15406212)
chr2 (13-108)||(15744804-15744899)
chr2 (15-106)||(19816063-19816154)
chr2 (13-108)||(29472240-29472335)
chr2 (4-107)||(41474430-41474533)
chr2 (13-103)||(19815707-19815797)
chr2 (4-106)||(33470271-33470373)
chr2 (13-106)||(7496336-7496429)
chr2 (13-106)||(13193345-13193438)
chr2 (13-106)||(17050929-17051022)
chr2 (13-106)||(19847675-19847768)
chr2 (13-101)||(7469171-7469259)
chr2 (13-113)||(38332697-38332797)
chr2 (4-107)||(26182048-26182151)
chr2 (13-108)||(30898658-30898753)
chr2 (20-106)||(10991851-10991937)
chr2 (13-82)||(16305048-16305118)
chr2 (13-107)||(16305382-16305476)
chr2 (13-106)||(24372324-24372417)
chr2 (13-106)||(34735343-34735436)
chr2 (13-88)||(2148243-2148318)
chr2 (13-76)||(42834452-42834515)
chr2 (13-103)||(8444825-8444915)
chr2 (13-110)||(7469515-7469612)
chr2 (13-106)||(8174242-8174335)
chr2 (13-82)||(17052411-17052480)
chr2 (13-106)||(29472599-29472692)
chr2 (13-101)||(41474087-41474175)
chr2 (13-103)||(2147888-2147979)
chr2 (13-107)||(8963174-8963268)
chr2 (13-107)||(36713587-36713681)
chr2 (25-101)||(8962365-8962441)
chr2 (4-108)||(24138855-24138959)
chr2 (16-101)||(8445149-8445234)
chr2 (16-60)||(12860727-12860771)
chr2 (13-60)||(10992208-10992255)
chr2 (32-82)||(36713961-36714011)
chr2 (32-81)||(23992218-23992267)
chr2 (42-82)||(15044763-15044803)
[»] scaffold0186 (2 HSPs)
scaffold0186 (4-109)||(24510-24615)
scaffold0186 (13-111)||(24157-24255)
[»] scaffold0134 (2 HSPs)
scaffold0134 (13-106)||(14135-14228)
scaffold0134 (13-106)||(14492-14585)
[»] scaffold0340 (2 HSPs)
scaffold0340 (16-108)||(18633-18725)
scaffold0340 (4-82)||(18297-18375)
[»] scaffold0072 (2 HSPs)
scaffold0072 (13-108)||(15805-15900)
scaffold0072 (4-82)||(15477-15555)
[»] scaffold0032 (2 HSPs)
scaffold0032 (4-106)||(81858-81960)
scaffold0032 (13-82)||(90795-90864)
[»] scaffold0019 (2 HSPs)
scaffold0019 (13-109)||(50473-50569)
scaffold0019 (13-107)||(50833-50928)
[»] scaffold0182 (2 HSPs)
scaffold0182 (14-101)||(19713-19800)
scaffold0182 (13-103)||(20065-20155)
[»] scaffold0221 (2 HSPs)
scaffold0221 (13-102)||(8785-8874)
scaffold0221 (13-106)||(8429-8521)
[»] scaffold0037 (3 HSPs)
scaffold0037 (13-78)||(45784-45849)
scaffold0037 (13-82)||(56493-56562)
scaffold0037 (13-82)||(63618-63687)
[»] scaffold0003 (4 HSPs)
scaffold0003 (17-106)||(349433-349522)
scaffold0003 (16-82)||(113417-113483)
scaffold0003 (4-107)||(113714-113817)
scaffold0003 (13-82)||(349097-349166)
[»] scaffold0246 (2 HSPs)
scaffold0246 (13-82)||(6352-6420)
scaffold0246 (13-60)||(6044-6091)
[»] scaffold0225 (2 HSPs)
scaffold0225 (14-106)||(9782-9874)
scaffold0225 (9-82)||(10909-10982)
[»] scaffold0260 (1 HSPs)
scaffold0260 (13-67)||(14231-14284)
[»] scaffold0001 (2 HSPs)
scaffold0001 (25-82)||(144044-144101)
scaffold0001 (13-61)||(147197-147245)


Alignment Details
Target: chr8 (Bit Score: 105; Significance: 1e-52; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 107 - 248
Target Start/End: Complemental strand, 18660917 - 18660768
Alignment:
Q  107 aataataatattaatgaaaaactcgagaataagcgaggttt--------cacaatatgtaaaaataaactccagtataaacgctaatttgatttaaaagc 198  Q
    |||||||||||||||||||||| | ||||||||| ||||||        ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18660917 aataataatattaatgaaaaaccccagaataagcaaggtttgaccaggtcacaatatgtaaaaataaactccagtagaaacgctaatttgatttaaaagc 18660818  T
Q  199 actctatatatagtttaataatacaaatgtatacacataataacacatct 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18660817 actctatatatagtttaataatacaaatgtatacacataataacacatct 18660768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 107 - 248
Target Start/End: Complemental strand, 22977932 - 22977783
Alignment:
Q  107 aataataatattaatgaaaaactcgagaataagcgaggttt--------cacaatatgtaaaaataaactccagtataaacgctaatttgatttaaaagc 198  Q
    |||||||||||||||||||||| | | ||||||| ||||||        ||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  22977932 aataataatattaatgaaaaaccccataataagcaaggtttgaccaggtcacaatatgtaaaaataaactccagtagaaatgctaatttgatttaaaagc 22977833  T
Q  199 actctatatatagtttaataatacaaatgtatacacataataacacatct 248  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22977832 actctatatatagtttaacaatacaaatgtatacacataataacacatct 22977783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 1651928 - 1652018
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  1651928 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaattaa 1652018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 1740304 - 1740394
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  1740304 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaattaa 1740394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 15048756 - 15048847
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||    
T  15048756 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaaggtaattaag 15048847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 45276690 - 45276595
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| |||| ||||||||||||    
T  45276690 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaagataattaagccaa 45276595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 1646603 - 1646501
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||| ||||||||||||    
T  1646603 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagagaaccaatctgataccaattaaatagttagaggaccaaaaaggtaattaa 1646504  T
Q  104 gcc 106  Q
    |||    
T  1646503 gcc 1646501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 1646854 - 1646956
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| | ||| | ||||||||||||    
T  1646854 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagatgaccaatccgataccaattaaatagttagaggacgaaaaaggtaattaa 1646953  T
Q  104 gcc 106  Q
    |||    
T  1646954 gcc 1646956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 33819878 - 33819785
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| |||||||||| ||||    
T  33819878 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaataattagaggaccaaaaaggtaatttagcc 33819785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 37569407 - 37569314
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||||||||| |||||    
T  37569407 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaaggtaatcaagcc 37569314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 11173991 - 11174079
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||||||||||    
T  11173991 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatcagataccaattaaatagttagaggaccaaaaaggtaatt 11174079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 15048491 - 15048399
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| |||||||||| ||||    
T  15048491 agaaacttagaggaccgaaataaatcaatttttagttagaggactaatccgataccaattaaatagttagaggaccaaaaaggtaatttagcc 15048399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 11920136 - 11920222
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||    
T  11920136 ttagaggacccaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagatgaccaaaaaggtaatttagcc 11920222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 1740041 - 1739952
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatta 102  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||||| |||||||||||    
T  1740041 gagaaacttagaggaccgaaataaatcaatttttagttagaggactaatccgataccgattaaatagttagaggaccaaaaaggtaatta 1739952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 1432224 - 1432136
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||| ||||||    
T  1432224 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaaagtaatt 1432136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 15871723 - 15871619
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||| ||||||||||  ||||||| |||||||||||||||||||||||||||| |||||||||||||| | ||||| ||||||||||||    
T  15871723 agtaacagtgagaaatttagaggaccaaaataaattaatttttagttagaggaccaatccgatatcaattaaatagttaaaggaccaaaaaggtaattaa 15871624  T
Q  104 gccaa 108  Q
    |||||    
T  15871623 gccaa 15871619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 34470904 - 34470996
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||| |||||||||||||||||    
T  34470904 aaacttagaggaccaaaataaatcaatttttagttagaggaccaatctgataccaactaaatagttagaggaccaaaaaggtaattaagccaa 34470996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 45077307 - 45077219
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||| | ||||| |||||||||||||||||    
T  45077307 ttagaggaccgaaataaatcaatttttagttagaggatcaatctgataccaattaaatagttagaggaccaaaaaggtaattaagccaa 45077219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 27473165 - 27473063
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||| | ||||| |||| |||||||||| |||||    
T  27473165 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgatatcaactaaatagttagaggaccaaaaagataattaagcc-ataat 27473067  T
Q  113 aata 116  Q
    ||||    
T  27473066 aata 27473063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 27669509 - 27669435
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatga 87  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27669509 gagaaatttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttaaatga 27669435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 40660243 - 40660333
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||| |||||||||| | ||||| ||||||||||||    
T  40660243 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaattcgataacaactaaatagttagaggaccaaaaaggtaattaa 40660333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 7535190 - 7535283
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||| |||| ||||| ||||    
T  7535190 gagaaacttagaggaccgaaataaatcaatttttagttagaggactaatctgataccaattaaatagttagaggaccaaaaagataatttagcc 7535283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 22763290 - 22763383
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||| ||||    
T  22763290 gagaaacttaagggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaaggtaatttagcc 22763383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 27473428 - 27473521
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||| |||| | ||||| |||||||||| ||||    
T  27473428 gagaaacttagaggaccgaaataaatcaatttttagttagaggactaatctgataccaattaaattgttagaggaccaaaaaggtaatttagcc 27473521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 33296041 - 33296134
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||| | ||||| |||||||||| ||||    
T  33296041 gagaaacttagaggaccgaaataaattaatttttagttagaggactaatctgataccaattaaatagttagaggaccaaaaaggtaatttagcc 33296134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 45276953 - 45277046
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||| |||| ||||| ||||    
T  45276953 gagaaacttagaggaccgaaataaataaatttttagttagaggactaatccgataccaattaaatagttagaggaccaaaaagataatttagcc 45277046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 15871969 - 15872073
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| |||||||||||||||| |||||||||||||| ||||| ||||||||||||| | ||||| ||| |||||| |    
T  15871969 agtaacagtgagaaacttagaggaccgaaataaatcaatttttatttagaggaccaatctgatacaaattaaatagttagaggaccaaaaatgtaattta 15872068  T
Q  104 gccaa 108  Q
    |||||    
T  15872069 gccaa 15872073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 5152891 - 5152954
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaa 76  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5152891 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaa 5152954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 5435257 - 5435351
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||| | ||||| |||| ||||| |||||    
T  5435257 gagaaacttaaaggaccgaaataaatcaatttttagttagagcaccaatccgataccaattatatagttagaggaccaaaaagataatttagcca 5435351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 45077551 - 45077653
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||| ||| ||||||||| | ||||| |||||||||| |    
T  45077551 agtaacagtgagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatctgatactaatcaaatagttagaggaccaaaaaggtaattta 45077650  T
Q  104 gcc 106  Q
    |||    
T  45077651 gcc 45077653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 1870292 - 1870385
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||| | |||  |||||||||||||||||| | ||||| ||| |||||||||||    
T  1870292 gagaaacttagaggaccgaaataaatcaatttttagttagaggatctatcttataccaattaaatagttagaggaccaaaaatgtaattaagcc 1870385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 38588680 - 38588611
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  38588680 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctaataccaattaaatagtta 38588611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 38588944 - 38589013
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  38588944 gagaaacttagaggaccgaaataaatcaatttttagttagaggatcaatccaataccaattaaatagtta 38589013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 40660085 - 40659981
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||| | |||||||||||||||||||||| ||| ||| |||||||||||||||||||| | ||||| ||| |||||| |    
T  40660085 agtaacagtgagaaacttagaggactgaaataaatcaatttttagttagatgactaattcgataccaattaaatagttagaggaccaaaaaagtaattta 40659986  T
Q  104 gccaa 108  Q
    |||||    
T  40659985 gccaa 40659981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 5434993 - 5434902
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    ||||||||||||  |||| |||||||||| |||||| ||||||| ||||||||||||||||||||||||| | ||||| |||||||||||||    
T  5434993 gagaaacttagaaaaccgaaataaatcaaattttaggtagaggatcaatccgataccaattaaatagttagaggaccaaaaaggtaattaag 5434902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 11707843 - 11707740
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    ||||||||||||||| || || |||||||||||||||||||||||||||| |||||||| |||||||||| | || || |||| |||||||||| | |||    
T  11707843 gagaaacttagaggatcgaaacaaatcaatttttagttagaggaccaatctgataccaactaaatagttagaggatcaaaaagataattaagcctaaaat 11707744  T
Q  113 aata 116  Q
    ||||    
T  11707743 aata 11707740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 5152627 - 5152536
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagc 105  Q
    |||||||||||||||||  |||||||||||||||||| |||||||||||| ||||||||||||| ||||| | || || ||||||||||||||    
T  5152627 gagaaacttagaggacca-aataaatcaatttttagtcagaggaccaatctgataccaattaaacagttagaggatcaaaaaggtaattaagc 5152536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 7949505 - 7949417
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||||| |||||||||||||||| ||| | |||||||| ||||||||||||||||||| | ||||| |||| |||||    
T  7949505 gagaaacttagaggaccgaaataaatcaatttttaattaaaagaccaatctgataccaattaaatagttagaggaccaaaaagataatt 7949417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 15741608 - 15741688
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||||||||   ||||| |||||||||||||||||||||    
T  15741608 aataaatcaaaatttagttagaggaccaaaccgataccaattaaatagttaagggaccaaaaaggtaattaagccaataat 15741688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 44594959 - 44595027
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| ||||||||||||||    
T  44594959 agaaacttagaggaccgaaataaatcaatttttagttagaggactaatccaatatcaattaaatagtta 44595027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 24666042 - 24666133
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataa 111  Q
    ||||||||||  ||||||||| |||||||||| |||||||| ||| ||||||||||||||||| | ||||| ||||||||||||||| ||||    
T  24666042 ttagaggaccaaaataaatcattttttagttaaaggaccaaaccgttaccaattaaatagttagaggaccaaaaaggtaattaagcctataa 24666133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 1870026 - 1869957
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||||    
T  1870026 gagaaacttagagaaccgaaataaattaatttttagttagaggatcaatctgataccaattaaatagtta 1869957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 22762606 - 22762512
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    ||||||||||  ||| || |||||||||||||||| ||||||||  |||||||||||||||||||||||| ||||||| |||  ||||| |||||    
T  22762606 gagaaacttaagggatcgaaataaatcaatttttaattagaggattaatccgataccaattaaatagttagatgaccaaaaatataatttagcca 22762512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 24652897 - 24652823
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||| ||||||||||||||||||| ||| ||||||||||||||||| | ||||| ||| |||||||||||    
T  24652897 aataaatcattttttagttagaggaccaaaccgttaccaattaaatagttagaggaccaaaaatgtaattaagcc 24652823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 7534935 - 7534838
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaata 110  Q
    |||||||||| | ||||| |||||||||||||||| ||| ||||| ||||||||| ||| |||||| ||| | ||||| |||||||||||| ||||||    
T  7534935 gagaaacttaaatgaccgaaataaatcaatttttaattaaaggactaatccgatatcaactaaataattagaagaccaaaaaggtaattaacccaata 7534838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 12643892 - 12643968
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    ||||||||||| |||||||||||||||||  |||||| ||||||||||||| | ||||| |||| ||||||||||||    
T  12643892 aataaatcaatatttagttagaggaccaaatcgatacaaattaaatagttagaggaccaaaaagataattaagccaa 12643968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 33295826 - 33295739
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||||||||  |||| |||||||||||||||| ||||| |||||||| |||||||| |||||||||| | ||||| |||||| |||||    
T  33295826 aaacttagaataccgaaataaatcaatttttaattagaagaccaatctgataccaactaaatagttagaggaccaaaaaggtcattaa 33295739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 108
Target Start/End: Complemental strand, 15740705 - 15740611
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||  |||||  |||||||||| |||||||||| ||||||| ||||||| |||||||||||||   ||||| ||||| |||||||||||    
T  15740705 agaaacttaagggaccaaaataaatcaaattttagttaggggaccaaaccgatactaattaaatagttaatggaccaaaaaggcaattaagccaa 15740611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 27669796 - 27669846
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  27669796 aataaatcaatttttagttagaagaccaatctgataccaattaaatagtta 27669846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 33819975 - 33820039
Alignment:
Q  18 acttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    ||||||| ||| | ||||||| |||||||||||||| || |||||||||||||||||||||||||    
T  33819975 acttagaagactgaaataaattaatttttagttagatgatcaatccgataccaattaaatagtta 33820039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 44594683 - 44594604
Alignment:
Q  24 aggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    ||||||| |||||||||||||||||||| ||||||||||  ||| |||||||||| ||| | ||||| ||| ||||||||    
T  44594683 aggaccgaaataaatcaatttttagttaaaggaccaatctaatagcaattaaataattagaggaccaaaaatgtaattaa 44594604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 40048411 - 40048501
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    ||||||||||||||| |  |||||| |||||||||||||||||| |||| ||||||||| ||||||  || | || || ||||||||||||    
T  40048411 gagaaacttagaggatcaaaataaaacaatttttagttagaggatcaatacgataccaactaaataactagaggatcaaaaaggtaattaa 40048501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 40048141 - 40048066
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    ||||||| |||||||||||||||||| ||||| ||| |||||||||||||| || | || ||| |||||| |||||    
T  40048141 aataaattaatttttagttagaggactaatccaatatcaattaaatagttagattatcaaaaaagtaatttagcca 40048066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 11920135 - 11920076
Alignment:
Q  47 agttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||||||| | ||||| |||||||||| | ||||| ||| |||||||||||    
T  11920135 agttagaggaccaatccaaaaccaaataaatagttagaggaccaaaaatgtaattaagcc 11920076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 29770376 - 29770449
Alignment:
Q  33 ataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||  ||||||||  ||||||| |||| ||||||||||||||||   ||||| |||||||||| ||||    
T  29770376 ataaatcaaaatttagttaagggaccaaaccgaaaccaattaaatagttaagggaccaaaaaggtaatttagcc 29770449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 33098651 - 33098611
Alignment:
Q  42 tttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| ||||||||  ||||||||||||||||||||    
T  33098651 tttttagttaaaggaccaaagcgataccaattaaatagtta 33098611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 45123609 - 45123649
Alignment:
Q  42 tttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| ||||||||  ||||||||||||||||||||    
T  45123609 tttttagttaaaggaccaaaacgataccaattaaatagtta 45123649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 6356633 - 6356735
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  6356633 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttataggaccaaaaaggtaattaa 6356732  T
Q  104 gcc 106  Q
    |||    
T  6356733 gcc 6356735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 35146801 - 35146697
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| ||||||||||||    
T  35146801 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgatactaactaaatagttagaggaccaaaaaggtaattaa 35146702  T
Q  104 gccaa 108  Q
    |||||    
T  35146701 gccaa 35146697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 6356376 - 6356289
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  6356376 aaacttagaggaccgaaataaatcaatttttaattagaggaccaatccgataccaattaaatagttagatgaccaaaaaggtaattaa 6356289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 7578965 - 7578870
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |||||||||||||    
T  7578965 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaaagtaattaagccaa 7578870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 21391547 - 21391642
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||| ||||||    
T  21391547 gagaaacttagaggaccgaaataaattaatttttagttagaggaccaatccgataccaattaaatagttagatgaccaaaaatgtaatttagccaa 21391642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 21391292 - 21391190
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||||| | |||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||| ||||||||||||    
T  21391292 agtagcggtgagaaacttagaggaccgaaataaatcaatttttagttagaggactaatctgataccaattaaatagttagaggaccaaaaaggtaattaa 21391193  T
Q  104 gcc 106  Q
    |||    
T  21391192 gcc 21391190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 10526404 - 10526311
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||| ||||    
T  10526404 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaaggtaatttagcc 10526311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 10526667 - 10526760
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| | |||| ||||||||||    
T  10526667 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggacaaaaaagataattaagcc 10526760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 36674065 - 36673976
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagc 105  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||||||    
T  36674065 aaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccataaaggtaattaagc 36673976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 1114402 - 1114501
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||| ||| |||||||||||||||||    
T  1114402 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatccgataacaactaaatagttagaggaccaaaaatgtaattaagccaataat 1114501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 1114145 - 1114059
Alignment:
Q  15 gaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||    
T  1114145 gaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaaggtaatt 1114059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 6356855 - 6356765
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||| ||||    
T  6356855 aaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaaggtaatttagcc 6356765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 48626165 - 48626063
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||| | ||||| ||||||||||||    
T  48626165 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagagaaccaatctgataccaactaaatagttagaggaccaaaaaggtaattaa 48626066  T
Q  104 gcc 106  Q
    |||    
T  48626065 gcc 48626063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 19681585 - 19681496
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagc 105  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||| ||||||||||||||    
T  19681585 aaacttagaggaccgaaataaatcaatttttagttagaggaccaatccaataccaactaaatagttagaggaccaaaaaggtaattaagc 19681496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 33716681 - 33716612
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33716681 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 33716612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 41453098 - 41453005
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |||||||||||    
T  41453098 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaattaagcc 41453005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 17750028 - 17749932
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaat 109  Q
    |||||||||||||||||| ||||||| ||||||||||||||| ||||||| |||| |||||||||||||| | ||||| ||||||||||||||||||    
T  17750028 gagaaacttagaggaccgaaataaattaatttttagttagagaaccaatctgatatcaattaaatagttagaggaccaaaaaggtaattaagccaat 17749932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 41453362 - 41453450
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||    
T  41453362 gagaaacttagaggatcgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaaggtaatt 41453450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 4155688 - 4155598
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||| |||||||||||||||    
T  4155688 aaacttagaggaccaaaataaatcaatttttagttagaggatcaaaccgataccaattaaatagttagaggaccaaaaaggtaattaagcc 4155598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 6357122 - 6357220
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataa 111  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||| ||| | || || ||| ||||||||||||||||    
T  6357122 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgatactaactaaataattagaggatcaaaaatgtaattaagccaataa 6357220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 8416587 - 8416485
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| ||||||||||  |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| |||||||||| |    
T  8416587 agtaacagtgagaaacttaagggaccgaaataaatcaatttttagttagaggatcaatccgataccaattaaatagttagaggaccaaaaaggtaattta 8416488  T
Q  104 gcc 106  Q
    |||    
T  8416487 gcc 8416485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 31638300 - 31638394
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||| |||||||||| |||||    
T  31638300 gagaaatttaaaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagagaaccaaaaaggtaatttagcca 31638394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 8542592 - 8542499
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | |||||||||| ||||    
T  8542592 gagaaacttagaggactgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaagacgaaaaaggtaatttagcc 8542499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 8936942 - 8936849
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | |||| ||||||||||    
T  8936942 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggactaaaaagataattaagcc 8936849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 17359274 - 17359205
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17359274 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccaataccaattaaatagtta 17359205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 31075550 - 31075643
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||| || |||||||||||| |||||||||||||||||| | ||||| |||| ||||||||||    
T  31075550 gagaaacttagaggaccgaaataaatcaatttttaattggaggaccaatccaataccaattaaatagttagaggaccaaaaagataattaagcc 31075643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 36423726 - 36423795
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36423726 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagtta 36423795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 44332876 - 44332969
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||| |||||| ||||    
T  44332876 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatttgataccaattaaatagttagaggaccaaaaatgtaatttagcc 44332969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 4931630 - 4931718
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||| | ||||| ||| ||||||    
T  4931630 gagaaacttagaggaccgaaataattcaatttttagttagaggaccaattcgataccaattaaatagttagaggaccaaaaatgtaatt 4931718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 16867799 - 16867707
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||| ||||||| | ||||| |||||||||| ||||    
T  16867799 agaaacttagaggactgaaataaatcaatttttagttagaggaccaatctgataccaattatatagttagaggaccaaaaaggtaatttagcc 16867707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 8542855 - 8542946
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    |||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||||||| | ||||| ||| |||||||||    
T  8542855 gagaaacttagaggaccaaaataaatcaatttttagttagaggatcaatccgataccaactaaatagttagaggaccaaaaatgtaattaag 8542946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 41892058 - 41891963
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaat 109  Q
    |||||||||  |||||| || |||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| |||||| |||||||    
T  41892058 agaaacttaagggaccgaaagaaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaagtaatttagccaat 41891963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 19681855 - 19681945
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| | | ||||| |||||||||| ||||    
T  19681855 aaacttagaggaccgaaataaatcaatttttagttagaggactaatctgataccaattaaatagtcagaggaccaaaaaggtaatttagcc 19681945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 28286210 - 28286117
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||| |||  ||||||||||    
T  28286210 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatctgataccaactaaatagttagaagaccaaaaatataattaagcc 28286117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 41192033 - 41192130
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||| ||| |||||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | ||||| ||| ||||||    
T  41192033 agtaacagtgagaaacttagatgaccgaaataaatcaatttttacttagaggactaatccgataccaattaaatagttagaggaccaaaaaagtaatt 41192130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 41752003 - 41752076
Alignment:
Q  9 cagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| ||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41752003 cagatagaaacttagaggactgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagtta 41752076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 43247508 - 43247439
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43247508 gagaaacttagaggatcgaaataaatcaatttttagttagaggaccaatccgatatcaattaaatagtta 43247439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 48626421 - 48626513
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||| ||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||| |||||||||| ||||    
T  48626421 agaaacttaaaggaccaaaataaatcaatttttagttagaggactaatctgataccaattaaatagttagaggaccaaaaaggtaatttagcc 48626513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 35147047 - 35147134
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||||||||||| |||||||||| ||||||||||||||| ||||| |||||||||||||||||| | ||||| |||| |||||    
T  35147047 agaaacttagaggaccgaaataaatcaaattttagttagaggactaatccaataccaattaaatagttagaggaccaaaaagataatt 35147134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 41751742 - 41751647
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaat 109  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| |||||||||||||| | ||||| |||| ||||| |||||||    
T  41751742 agaaacttagaggaccgaaataagtcaatttttagttagaggactaatccaatatcaattaaatagttaaaggaccaaaaagataatttagccaat 41751647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 31638036 - 31637946
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    ||||||||||| ||  || ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||| | ||||||||||||    
T  31638036 gagaaacttagtggttcgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggactaaaaaggtaattaa 31637946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 7909523 - 7909592
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  7909523 gagaaacttagaagaccgaaataaatcaatttttagttagaggaccaatccaatatcaattaaatagtta 7909592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 7579229 - 7579317
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||| ||||| || || |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| |||| |||||    
T  7579229 gagaaaattagatgatcgaaataaatcaatttttagttagaggactaatccgataccaattaaatagttagaagaccaaaaagataatt 7579317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 28286474 - 28286562
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||| |||||||||||||||||| ||||| | ||||| ||| ||||||    
T  28286474 gagaaacttagaggaccgaaatcaatcaatttttagttaaaggactaatccgataccaattaaaaagttagaggaccaaaaatgtaatt 28286562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 17363595 - 17363662
Alignment:
Q  15 gaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||| ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  17363595 gaaacttaaaggaccgaaataaatcaatttttagttagaggacaaatccaataccaattaaatagtta 17363662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 36282879 - 36282784
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    ||||||||||  |||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||| | ||| | ||| |||||| ||||||    
T  36282879 gagaaacttaagggaccgaaataaatcaatttttagttaaaggaccaatctgataccaattaaatagttagaggactaaaaatgtaatttagccaa 36282784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 7909376 - 7909310
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  7909376 aaacttagaggaccgaaataaatcaatttttagttagaaaaccaatctgataccaattaaatagtta 7909310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 29277707 - 29277793
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||  ||||||||| ||||||||||||||||||| ||| |||||| |||||||||| | ||||| |||||||||||||||    
T  29277707 ttagaggaccaaaataaatcattttttagttagaggaccaaaccgttaccaaataaatagttagaggaccaaaaaggtaattaagcc 29277793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 34037266 - 34037356
Alignment:
Q  11 gagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||| ||||  |||||||||||||||||| | ||||| |||| |||||    
T  34037266 gagataaacttagaggaccgaaataaatcaatttttagtcagaggactaatcatataccaattaaatagttagaggaccaaaaagataatt 34037356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 28297912 - 28297843
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    ||||||||||||| || | |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  28297912 gagaaacttagagaactgaaataaatcaatttttagttagaggaccaatctaataccaattaaatagtta 28297843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 8417293 - 8417388
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    ||||||||||  |||||  ||||||| |||||||||||| |||||||||| ||||||||||||||||||| | ||||| |||| ||||| ||||||    
T  8417293 gagaaacttaagggaccaaaataaattaatttttagttaaaggaccaatctgataccaattaaatagttagaggaccaaaaagataatttagccaa 8417388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 8937197 - 8937275
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| ||| |||||||||||||||||| |||||||||| ||||| ||||||||| |||| ||||| |||||||||||||    
T  8937197 agtaacagtgagaaacttagaggaccgaaataaatcaacttttaattagaggacaaatctgatactaattaaatagtta 8937275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 36423462 - 36423388
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatga 87  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||||||  || ||||||||||||||| ||||    
T  36423462 gagaaacttagaggaccaaaataaattaatttttagttagaggaccaatctaatgccaattaaatagttagatga 36423388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 29276961 - 29276877
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    ||||||||||  ||||||||| |||||| |||||||||||| ||| ||||||||||||||||| | ||||| ||| |||||||||    
T  29276961 ttagaggaccaaaataaatcattttttaattagaggaccaaaccgttaccaattaaatagttagaggaccaaaaaagtaattaag 29276877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 41191775 - 41191682
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    ||||||||||||| || | |||||| ||||||||||||||||||||||||| ||| ||| |||||||||| | ||  | ||||||||||||||||    
T  41191775 gagaaacttagagaactgaaataaaccaatttttagttagaggaccaatccaatatcaactaaatagttagagga-taaaaaggtaattaagcca 41191682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 27739021 - 27739090
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||| | ||||||| ||||||||||||||||||||| ||| ||||| |||||||| ||||||||||    
T  27739021 gagaaactaaaaggaccgaaataaatcaatttttagttaggggatcaatctgataccaaataaatagtta 27739090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 36283581 - 36283632
Alignment:
Q  32 aataaatcaatttttagttagagga-ccaatccgataccaattaaatagtta 82  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  36283581 aataaatcaatttttagttagaggatcaaatccgataccaattaaatagtta 36283632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 36674095 - 36674179
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||| |||||||||||||||||||  | ||| || ||||||||||||||||||| | | ||||| |||||||||| ||||    
T  36674095 ttagaggaccgaaataaatcaatttttagtt--aagactaacccgataccaattaaatagtcagaggaccaaaaaggtaatttagcc 36674179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 28298176 - 28298250
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatga 87  Q
    ||||||||||||| | || |||||||||||||||| |||||||   |||| ||||||||||||||||||| ||||    
T  28298176 gagaaacttagagaatcgaaataaatcaatttttaattagagggtaaatctgataccaattaaatagttagatga 28298250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 32946701 - 32946758
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaatt 73  Q
    |||||||||  |||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  32946701 aaacttagaaaaccgaaataaatcaatttttagttagagtaccaatctgataccaatt 32946758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 33716940 - 33717005
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaata 78  Q
    |||||||||| | ||||| ||||||| |||||||||||||| || |||||||||| ||||||||||    
T  33716940 gagaaacttaaatgaccgaaataaattaatttttagttagatgatcaatccgatatcaattaaata 33717005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 36423790 - 36423850
Alignment:
Q  46 tagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||| ||||| |||||||||||||||||| | ||||| |||||||||| ||||    
T  36423790 tagttagaggacaaatccaataccaattaaatagttagaggaccaaaaaggtaatttagcc 36423850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 28263570 - 28263520
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| |||||||||| ||||||| ||||||| |||||||||||||    
T  28263570 aataaatcaaattttagttaggggaccaaaccgatactaattaaatagtta 28263520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 41893451 - 41893501
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    ||||||| |||||||||||||| |||||||||||||  |||||||||||||    
T  41893451 aataaataaatttttagttagatgaccaatccgatattaattaaatagtta 41893501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 38677054 - 38677128
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||  ||||||||  ||||||| |||| ||||||||||||||||   ||||| |||||||||| ||||    
T  38677054 aataaatcaaaatttagttaagggaccaaaccgaaaccaattaaatagttaagggaccaaaaaggtaatttagcc 38677128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 38958826 - 38958722
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  38958826 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaattaa 38958727  T
Q  104 gccaa 108  Q
    |||||    
T  38958726 gccaa 38958722  T

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Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 38959080 - 38959173
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||    
T  38959080 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaattaagcc 38959173  T

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Target: chr5; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 9989416 - 9989323
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||| ||||    
T  9989416 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagatgaccaaaaaagtaatttagcc 9989323  T

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Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 35569877 - 35569777
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||||    
T  35569877 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaagaccaaaaaggtaattaa 35569778  T
Q  104 g 104  Q
    |    
T  35569777 g 35569777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 39325514 - 39325414
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||||    
T  39325514 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagtcagaggaccaaaaaggtaattaa 39325415  T
Q  104 g 104  Q
    |    
T  39325414 g 39325414  T

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Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 1140122 - 1140217
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||| |||||||||||    
T  1140122 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaaggcaattaagccaa 1140217  T

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Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 25183010 - 25183100
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  25183010 gagaagcttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaattaa 25183100  T

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Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 24040178 - 24040087
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||| ||||||||    
T  24040178 gagaaacttagtggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttaaaggaccaaaaagataattaag 24040087  T

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Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 39325712 - 39325811
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| | ||| |||||| ||||||||||    
T  39325712 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaataattagaggactaaaaatgtaatttagccaataat 39325811  T

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Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 27185967 - 27185866
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    |||||||||||||||||  |||||||||||||||||||||| |||||||| ||||||||||||||||||| | ||||| ||| ||||||||||||| |||    
T  27185967 gagaaacttagaggaccaaaataaatcaatttttagttagaagaccaatctgataccaattaaatagttagaggaccaaaaaagtaattaagccaaaaat 27185868  T
Q  113 aa 114  Q
    ||    
T  27185867 aa 27185866  T

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Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 36440557 - 36440650
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| |||| ||||| ||||    
T  36440557 gagaaacttagaggaccgaaataaatcaatttttagttagaggactaatccgataccaattaaatagttagaggaccaaaaagataatttagcc 36440650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 11316302 - 11316376
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaata 78  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11316302 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaata 11316376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 27186221 - 27186323
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||| |||||| |    
T  27186221 agtaacagtgagaaacttagaggactgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaatgtaattta 27186320  T
Q  104 gcc 106  Q
    |||    
T  27186321 gcc 27186323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 19184687 - 19184598
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagc 105  Q
    ||||||| ||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||||||||||    
T  19184687 aaacttaaaggaccaaaataaatcaatttttagttagaggaccaaaccgataccaattaaatagttagaggaccaaaaaggtaattaagc 19184598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 32288180 - 32288079
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||| ||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||| | ||||| ||||||||||||    
T  32288180 agtaacagtgagaaacttagatgaccgaaataaatcaatttttagttagatgaccaatctaataccaattaaatagttagaggaccaaaaaggtaattaa 32288081  T
Q  104 gc 105  Q
    ||    
T  32288080 gc 32288079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 36440293 - 36440200
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||| | || || |||||||||||||||    
T  36440293 gagaaacttagaggaccgaaataaatcaatttttagttagaggatcaatctgataccaactaaatagttagaggatcaaaaaggtaattaagcc 36440200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 37424364 - 37424255
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||| | || || |||| |||||||    
T  37424364 agtaacagtgagaaacttagaagaccgaaataaatcaatttttagttagaggaccaatctgataccaaataaatagttagaggatcaaaaagataattaa 37424265  T
Q  104 gccaataata 113  Q
    ||||| ||||    
T  37424264 gccaaaaata 37424255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 11316050 - 11315982
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11316050 agaaacttagaggatcgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 11315982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 16860396 - 16860302
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||| | ||||| |||| ||||| |||||    
T  16860396 gagaaacttaaaggaccgaaataaatcaatttttagttagaggaccaatctgataccgattaaatagttagaggaccaaaaagataatttagcca 16860302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 9989671 - 9989746
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatag 79  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||    
T  9989671 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaagatcaatccgataccaattaaatag 9989746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 2183036 - 2182967
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2183036 gagaaacttagacgacataaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 2182967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 32288436 - 32288521
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||  ||| |||||||||||||| | || || ||||||||||    
T  32288436 aaacttagaggaccgaaataaatcaatttttagttagaggaccaatctaatatcaattaaatagttagaggatcaaaaaggtaatt 32288521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 37424622 - 37424709
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||||  |||||||||||||||||||||||||| ||||| ||| |||||||||||||| | ||||| ||||||||||    
T  37424622 gagaaacttagaggaccaaaataaatcaatttttagttagaggactaatccaata-caattaaatagttagaggaccaaaaaggtaatt 37424709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 24040444 - 24040538
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||||||| ||||| | ||||| ||||||||||||||||||| ||||||||||| ||||||||||||| | ||||| ||| |||||| |||||    
T  24040444 gagaaacttaaaggactgaaataagtcaatttttagttagaggatcaatccgatactaattaaatagttagaggaccaaaaaagtaatttagcca 24040538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 2183300 - 2183369
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| || |||| |||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  2183300 gagaaacttacagaaccgaaataaatcaatttttagttaaaggatcaatccgataccaattaaatagtta 2183369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 19128434 - 19128505
Alignment:
Q  37 atcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||| | ||||| |||||||||||||||||    
T  19128434 atcaatttttagttagaggatcaatctgatactaattaaatagttagaggaccaaaaaggtaattaagccaa 19128505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 34264705 - 34264810
Alignment:
Q  13 gagaaacttagaggaccggaataa----atcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||| |||||    ||||||||||||||||||||||||| | |||||||||||||||||  | ||||| |||  ||||| ||||||    
T  34264705 gagaaacttagaggaccgaaataattaaatcaatttttagttagaggaccaattcaataccaattaaatagttggaggaccaaaaatataatttagccaa 34264804  T
Q  109 taataa 114  Q
    | ||||    
T  34264805 ttataa 34264810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 31756666 - 31756749
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    ||||||||||  ||||||||| |||||||||||||||| || ||| |||||||||||||||||   ||||| ||||||||||||    
T  31756666 ttagaggaccaaaataaatcattttttagttagaggactaaaccgttaccaattaaatagttaggagaccaaaaaggtaattaa 31756749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 25567364 - 25567414
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||    
T  25567364 aataaatcaatttttagttaaagaaccaatccgataccaattaaatagtta 25567414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 33817660 - 33817710
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  33817660 aataaataaatttttagttagaggatcaatccgataccaattaaatagtta 33817710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 34264455 - 34264396
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaat 72  Q
    ||||||||||||||| || |||||||||||||||||||||||| ||||||| | ||||||    
T  34264455 gagaaacttagaggatcgaaataaatcaatttttagttagagggccaatccaacaccaat 34264396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 19185532 - 19185634
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| |||||||||| |||  |||||  |||||||||| |||||||||| ||||||| || |||| |||||||||||||   ||||| |||||||||| |    
T  19185532 agtaacagagagaaatttaagggaccaaaataaatcaaattttagttaggggaccaaaccaatactaattaaatagttaagggaccaaaaaggtaattta 19185631  T
Q  104 gcc 106  Q
    |||    
T  19185632 gcc 19185634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 35570137 - 35570206
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||| |||   |||||||||||||||||||||||||  ||||  ||||||||||||||||||    
T  35570137 gagaaacttagaagactaaaataaatcaatttttagttagaggagtaatcaaataccaattaaatagtta 35570206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 29199045 - 29198954
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||| || | || |||||||||||||||| ||||||||| |||   ||| |||||||||||||| | ||   ||||||||||||||||    
T  29199045 gagaaacttaaagaatcgaaataaatcaatttttaattagaggactaatttaatatcaattaaatagttagagga--tgaaaggtaattaagcc 29198954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 6157200 - 6157160
Alignment:
Q  42 tttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| ||||||||  ||||||||||||||||||||    
T  6157200 tttttagttaaaggaccaaagcgataccaattaaatagtta 6157160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 22510 - 22609
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| |||||    
T  22510 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaattaagcctataat 22609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 21605 - 21512
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||| |||||||||||||||    
T  21605 gagaaacttagaggaccgaaataaatcaatttttagttagaggactaatctgataccaattaaatagttagaggaccaaaaaggtaattaagcc 21512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 44991372 - 44991277
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||    
T  44991372 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaattaagccaa 44991277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 53751250 - 53751358
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||| |    
T  53751250 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaaggtaattta 53751349  T
Q  104 gccaataat 112  Q
    |||||||||    
T  53751350 gccaataat 53751358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 15477738 - 15477645
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||    
T  15477738 gagaaacttagaggaccgaaataaatcaatgtttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaattaagcc 15477645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 15478002 - 15478097
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| ||||||    
T  15478002 gagaaacttagaggaccgaaattaatcaatttttagttagaggaccaatccgataccaattaaatagttagaagaccaaaaaggtaatttagccaa 15478097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 39448845 - 39448940
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| |||||||||| ||||||    
T  39448845 gagaaacttagaggaccgaaataaatcaatttttagttagaggatcaatccgataccaattaaatagttagaggaccaaaaaggtaatttagccaa 39448940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 25269348 - 25269450
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| ||| ||||||||    
T  25269348 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggatcaatccgataccaattaaatagttagaggaccaaaaaagtaattaa 25269447  T
Q  104 gcc 106  Q
    |||    
T  25269448 gcc 25269450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 53751004 - 53750903
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| | ||| | ||||||||||||    
T  53751004 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaatttaatagttagaggactaaaaaggtaattaa 53750905  T
Q  104 gc 105  Q
    ||    
T  53750904 gc 53750903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 38339851 - 38339943
Alignment:
Q  15 gaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  38339851 gaaacttagaggatcgaaataaatcaatttttagttagaggatcaatccgataccaattaaatagttagaggaccaaaaaggtaattaagcca 38339943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 8592326 - 8592421
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |||||||||||||    
T  8592326 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaattaagccaa 8592421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 43566471 - 43566380
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||| ||||||||    
T  43566471 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaagaccaaaaagataattaag 43566380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 43734388 - 43734289
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||| | ||||| ||||||||||||    
T  43734388 agtaacagtgagaaacttagaggaccgaaataaatctatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaaggtaattaa 43734289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 50769178 - 50769269
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    ||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| |||||||||||||    
T  50769178 gagaaacttagaggatcgaaataaatcaatttttagttagaggatcaatccgataccaattaaatagttagaggaccaaaaaggtaattaag 50769269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 6505639 - 6505537
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| | || || ||| ||||||||    
T  6505639 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgatatcaattaaatagttagaggatcaaaaatgtaattaa 6505540  T
Q  104 gcc 106  Q
    |||    
T  6505539 gcc 6505537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 52557179 - 52557089
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||| |||||||||||||    
T  52557179 agaaacttataggaccgaaataaatcaatttttagttagaggaccaattcgataccaattaaatagttagaggaccaaaaaggtaattaag 52557089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 624036 - 624129
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |||||| ||||    
T  624036 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaatttagcc 624129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 8592062 - 8591969
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | |||||||||| ||||    
T  8592062 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggactaaaaaggtaatttagcc 8591969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 14985424 - 14985331
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||| | ||||| |||||||||| ||||    
T  14985424 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctaataccaattaaatagttagaggaccaaaaaggtaatttagcc 14985331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 16038151 - 16038244
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||| |||||||||| ||||    
T  16038151 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaactaaatagttagaggaccaaaaaggtaatttagcc 16038244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 42855432 - 42855343
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatta 102  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||| | ||||| |||||||||||    
T  42855432 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccactccgataccaactaaatagttagaggaccaaaaaggtaatta 42855343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 42855696 - 42855789
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| | |||||||||| ||||    
T  42855696 gagaaacttagaggaccgaaataaatcaatttttagttggaggaccaatccgatactaattaaatagttaaatgactaaaaaggtaatttagcc 42855789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 50768914 - 50768821
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||| | || || |||||||||||||||    
T  50768914 gagaaacttagaggaccgaaataaatcaatttttagttagatgaccaattcgataccaattaaatagttaaaggatcaaaaaggtaattaagcc 50768821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 53995292 - 53995385
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||| | ||||| |||||||||| ||||    
T  53995292 gagaaacttagaggaccgaaataaatcaatttttagttagaggactaatgcgataccaattaaatagttagaggaccaaaaaggtaatttagcc 53995385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 38339585 - 38339490
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||| ||||||||||| | ||||| |||||||||| ||||||    
T  38339585 gagaaacttagaggacctaaataaatcaatttttagttagaggaccaatctgataccagttaaatagttagaggaccaaaaaggtaattcagccaa 38339490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 44991635 - 44991734
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    |||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||| | ||||| |||| ||||| |||| |||||    
T  44991635 gagaaacttagaggaccgaaataaatcaattttcagttagaggatcaatccgataccaattaaatagttagaggaccaaaaagataatttagcctataat 44991734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 8398124 - 8398030
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||| ||||||||||||||||    
T  8398124 gagaaagttagaggatcgaaataaatcaatttttagttagaggaccaatctgataccaactaaatagttagaggaccaaaaaggtaattaagcca 8398030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 12817896 - 12817806
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||| |||||||||| ||||    
T  12817896 aaacttaaaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagagaaccaaaaaggtaatttagcc 12817806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 16037896 - 16037794
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||| ||| ||||||||    
T  16037896 agtaacagtgagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatctgataccaactaaatagttagaggaccaaaaatgtaattaa 16037797  T
Q  104 gcc 106  Q
    |||    
T  16037796 gcc 16037794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 19088689 - 19088791
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||||||  |||| ||||||||||||||||||| | ||||| |||||||||| |    
T  19088689 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggattaatctgataccaattaaatagttagaggaccaaaaaggtaattta 19088788  T
Q  104 gcc 106  Q
    |||    
T  19088789 gcc 19088791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 20888245 - 20888167
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20888245 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggatcaatccgataccaattaaatagtta 20888167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 44957491 - 44957413
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  44957491 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaataaaatagtta 44957413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 46849771 - 46849669
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||| | ||||||||||||    
T  46849771 agtaacagtgagaaacttagaggatcgaaataaatcaatttttagttagaggaccaatctgataccaactaaatagttagaggacgaaaaaggtaattaa 46849672  T
Q  104 gcc 106  Q
    |||    
T  46849671 gcc 46849669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 53995027 - 53994933
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||||| |||||||||| | ||||| ||||||||||||||||    
T  53995027 gagaaacttaaaggaccgaaataaatcaatttttagttaaaggaccaatctgataccaactaaatagttagaggaccaaaaaggtaattaagcca 53994933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 55022386 - 55022284
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| ||||||||||||||| || ||||||||||||||||||||||||| ||||| ||||||||||||||||||| | ||||| |||||||||| |    
T  55022386 agtaacagtgagaaacttagaggatcgaaataaatcaatttttagttagaggatcaatctgataccaattaaatagttagaggaccaaaaaggtaattta 55022287  T
Q  104 gcc 106  Q
    |||    
T  55022286 gcc 55022284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 4513273 - 4513366
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| |||||||||| | ||||| |||||||||| ||||    
T  4513273 gagaaacttagaggaccgaaataaattaatttttagttagaggatcaatccgataccaactaaatagttagaggaccaaaaaggtaatttagcc 4513366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 6712056 - 6711987
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6712056 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagtta 6711987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 41752164 - 41752260
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||| ||| |||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  41752164 agtaacagtgagaaacttagaggaccaaaataaatgaatttttagttagaggaccaatccgataccaattaaatagttagaggacca-aaaggtaatt 41752260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 44125827 - 44125920
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||  |||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||| ||| |||||| ||||    
T  44125827 gagaaacttagaggaccaaaataaatcaatttttagttagaagaccaatccgacaccaattaaatagttagatgaccaaaaatgtaatttagcc 44125920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 21763529 - 21763637
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||||||| ||||  |||||||||||||||||| | ||||| ||| |||||| |    
T  21763529 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggactaatcttataccaattaaatagttagaggaccaaaaatgtaattta 21763628  T
Q  104 gccaataat 112  Q
    ||| |||||    
T  21763629 gcctataat 21763637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 24898282 - 24898194
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||| | ||||| ||| ||||||    
T  24898282 gagaaacttagaggaccgaaataaatcaatttttaattagaggatcaatccgataccaattaaatagttagaggaccaaaaatgtaatt 24898194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 30683619 - 30683527
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagc 105  Q
    |||||||||||||||||| |||||||||||||||| || ||||| ||||| ||||||||||||||||||| | ||||| ||||||||||||||    
T  30683619 gagaaacttagaggaccgaaataaatcaatttttaattggaggatcaatctgataccaattaaatagttagaggaccaaaaaggtaattaagc 30683527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 44957714 - 44957810
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaat 109  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||||  |||| |||||||||||||| | ||||| ||||||||||||||||||    
T  44957714 gagaaacttagaggatcgaaataaatcaatttttagttaaaggaccaatttgatatcaattaaatagttagaggaccaaaaaggtaattaagccaat 44957810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 53259495 - 53259583
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||| | ||||| |||| |||||    
T  53259495 gagaaacttagaggaccgaaataaatcaatttttagttagaggatcaatctgataccaattaaatagttagaggaccaaaaagataatt 53259583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 1433619 - 1433726
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||| |||||| |    
T  1433619 agtaacagtgagaaaattagaggaccaaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaatgtaattta 1433718  T
Q  104 gccaataa 111  Q
    ||| ||||    
T  1433719 gcctataa 1433726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 30683887 - 30683950
Alignment:
Q  15 gaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaata 78  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30683887 gaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaata 30683950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 39448581 - 39448490
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||| | || ||||||||    
T  39448581 gagaaacttaaaggaccgaaataaatcaatttttagttagaggaccaattcgataccaattaaatagttagaggaccaaacagataattaag 39448490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 14985679 - 14985781
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| ||||||||||||||| |  |||||||||||||||||||||| |||||||| ||||| ||||||||||||| | ||||| ||||||||||||    
T  14985679 agtaacagtgagaaacttagaggatcaaaataaatcaatttttagttagatgaccaatctgatacaaattaaatagttagaggaccaaaaaggtaattaa 14985778  T
Q  104 gcc 106  Q
    |||    
T  14985779 gcc 14985781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 12818163 - 12818256
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| ||| | ||||| |||| ||| ||||||    
T  12818163 gagaaacttagaggaccgaaataaatcaagttttagttagagcaccaatccgataccaattaaataattagaggaccaaaaagataagtaagcc 12818256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 21763263 - 21763178
Alignment:
Q  23 gaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||| |||| ||||||||||||    
T  21763263 gaggaccgaaataaatcaatttttagttggaggaccaatccgataccaattaaataattagaggaccaaaaagataattaagccaa 21763178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 24898546 - 24898639
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||||| | ||| | ||| |||||||||||    
T  24898546 gagaaacttagaggatcaaaataaatcaatttttagttagaggaccaatccaataccaattaaatagttagaggacaaaaaaagtaattaagcc 24898639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 25182169 - 25182262
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||| | ||||| |||| ||||| ||||    
T  25182169 gagaaacttagaggaccgaaataaatcaatttttagttagaggatcaatctgataccaactaaatagttagaagaccaaaaagataatttagcc 25182262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 36122790 - 36122858
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36122790 gagaaacttagaggaccgaaataa-tcaatttttagttagaggaccaatccgataccaattaaatagtta 36122858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 41877949 - 41877860
Alignment:
Q  17 aacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||| |||||||||||||||||||||| |||||||| |||||||| |||||| ||| ||||||| |||||||| ||||||    
T  41877949 aacttagaggaccgaaataaatcaatttttagttagatgaccaatctgataccaactaaataattagatgaccaaaaaggtaactaagcc 41877860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 43734643 - 43734712
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43734643 gagaaacttataggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagtta 43734712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 46850029 - 46850114
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||| ||||||| |||| |||||    
T  46850029 aaacttagaggaccgaaataaatcaatttttagttagaggactaatctgataccaatttaatagttagatgaccaaaaagataatt 46850114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 47603718 - 47603811
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||  |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||| ||||    
T  47603718 gagaaacttaagggaccgaaataaattaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaaggtaatttagcc 47603811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 1433364 - 1433272
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagc 105  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||| |||||||| ||||||||| | ||||| |||| |||||||||    
T  1433364 gagaaacttagagaaccaaaataaatcaatttttagttagaggaccaatccaataccaatgaaatagttagaggaccaaaaagataattaagc 1433272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 23756157 - 23756245
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||||| | ||||| ||| ||||||    
T  23756157 gagaaacttagaggaccaaaataaattaatttttagttaaaggaccaatccgataccaattaaatagttagaggaccaaaaatgtaatt 23756245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 19088431 - 19088344
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    ||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||| | ||||| |||| |||||||    
T  19088431 aaacttagaggaccgaaataaatcaatttttagttagaggatcattccgataccaactaaatagttagaggaccaaaaagataattaa 19088344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 19508505 - 19508411
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||| |||  ||||||||||| |||||||||||||||||||||||||||||||||||||| | || || ||| |||||||||||||    
T  19508505 gagaaacttagagggccgacataaatcaattgttagttagaggaccaatccgataccaattaaatagttagaggatca-aaaagtaattaagccaa 19508411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 33091546 - 33091451
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    ||||||||||||||| |  |||||||||||||||||||||||||||||||  ||||  |||||||||||| | ||||| |||||||||||||||||    
T  33091546 gagaaacttagaggatcaaaataaatcaatttttagttagaggaccaatctaatactgattaaatagttagaggaccaaaaaggtaattaagccaa 33091451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 47603045 - 47602934
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| ||||||||||  |||||  |||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||| |||| ||||| |    
T  47603045 agtaacagtgagaaacttaagggaccaaaataaatcaatttttaattagaggaccaatccgataccaattaaatagttagaggaccaaaaagataattta 47602946  T
Q  104 gccaataataat 115  Q
    ||| ||| ||||    
T  47602945 gcctatattaat 47602934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 108
Target Start/End: Complemental strand, 23755510 - 23755416
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||| |||| ||||||| |||||||||||||||||||||||| |||||||||||||||||| | ||| |  ||| ||||||||||||    
T  23755510 agaaacttagagaaccgaaataaattaatttttagttagaggaccaatccaataccaattaaatagttagaggacgaataagttaattaagccaa 23755416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 41751891 - 41751818
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | || || |||||||||||||||    
T  41751891 aataaatcaatttttagttagaggaccaatccgataccaattaaatagttaaagga-caaaaaggtaattaagcc 41751818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 41878206 - 41878308
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||||||| |||| ||| ||||||| ||||||| | ||||| ||| |||||| |    
T  41878206 agtaacagtgagaaacttagaggaccgcaataaatcaatttttagttagaggactaatctgattccaattatatagttagaggaccaaaaaagtaattta 41878305  T
Q  104 gcc 106  Q
    |||    
T  41878306 gcc 41878308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 25181905 - 25181812
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||||||||||||| || |||||||||| | ||||| ||| |||||||||||    
T  25181905 gagaaacttagaagaccaaaataaatcaatttttagttaaaggaccaatccgatacaaactaaatagttagaggaccaaaaatgtaattaagcc 25181812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 49135994 - 49136063
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| ||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  49135994 gagaaacttaaaggaccgaaataaatcaatttttagttagaggatcaatctgataccaattaaatagtta 49136063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 52692117 - 52692048
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  52692117 gagaaacttaagggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagtta 52692048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 623771 - 623679
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||| ||||||  |||||| ||||||||||||||||||||||||||||||||| |||||||||| | ||||| |||  ||||||||||    
T  623771 agaaacttataggaccaaaataaaacaatttttagttagaggaccaatccgataccaactaaatagttaaaggaccaaaaatataattaagcc 623679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 31214250 - 31214162
Alignment:
Q  18 acttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||| || ||| |||||| ||||    
T  31214250 actttgaggaccgaaataaattaatttttagttagaggaccaatctgataccaattaaatagttagatgatcaaaaatgtaatttagcc 31214162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 36122507 - 36122435
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| | | ||||| |||||||||||||    
T  36122507 aataaatcaatttttagttagaggaccaatctgataccaattaaatagtcagaggaccaaaaaggtaattaag 36122435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 52557444 - 52557532
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||| ||||||||||  |||||||||||||||||||||| |||||||| ||||||||||||||||||| | ||||| |||| |||||    
T  52557444 gagaaatttagaggaccaaaataaatcaatttttagttagaagaccaatctgataccaattaaatagttagaggaccaaaaagataatt 52557532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 6712326 - 6712411
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||  ||||||||||||||||| | ||||| |||||||||||||||    
T  6712326 ttagaggaccgaaataaatcaatttgtagttagaggatcaatccattaccaattaaatagttaga-gaccaaaaaggtaattaagcc 6712411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 37206787 - 37206878
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||||||| |||| |||||||||||||||||||||||||| |||| |||| |||||||||||||| |  || | |||||||||| |||||    
T  37206787 aaacttagagaaccgaaataaatcaatttttagttagaggactaatctgatatcaattaaatagttagagaacaaaaaaggtaatttagcca 37206878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 52692797 - 52692891
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    ||||||||||  |||||  |||||||||||||||||||||||||||||| ||||| ||||||||||| || | ||||| |||||||||| ||||||    
T  52692797 gagaaacttaagggaccaaaataaatcaatttttagttagaggaccaat-cgatagcaattaaatagctaaaggaccaaaaaggtaatttagccaa 52692891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 50508817 - 50508879
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaata 78  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||| |||||||||||||||    
T  50508817 aaacttagaggaccaaaataaatcaatttttagttagatgaccaatctgataccaattaaata 50508879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 19508770 - 19508831
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaatta 74  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||||    
T  19508770 gagaaacttggaggaccgaaataaatcaatttttagttagaggaccaatctgatatcaatta 19508831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 33091810 - 33091879
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||||  |||| |||||||||||||    
T  33091810 gagaaacttagatgactgaaataaatcaatttttagttagaggaccaatctaatactaattaaatagtta 33091879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 44125715 - 44125624
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    ||||||||||||  |||| || |||||||||||||||||||| ||||||   |||||||||||||||||| | ||||| |||| ||||||||    
T  44125715 gagaaacttagaaaaccgaaaaaaatcaatttttagttagagaaccaatttaataccaattaaatagttaaaggaccaaaaagataattaag 44125624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 55022424 - 55022486
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||| || |||||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  55022424 ttagaggatcgaaataaatcaatttttaattagaggattaatccgataccaattaaatagtta 55022486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 43566735 - 43566792
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgatacca 70  Q
    |||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||    
T  43566735 gagaaacttaaaagactgaaataaatcaatttttagttagaggaccaatccgatacca 43566792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 37206517 - 37206421
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataata 113  Q
    ||||||||||||||| ||||||||||||||||  |||||||  |||| |||| ||| | |||||||| | || || ||||||||||||||||| ||||    
T  37206517 aaacttagaggaccgaaataaatcaatttttaactagaggattaatctgatatcaactgaatagttagaggatca-aaaggtaattaagccaaaaata 37206421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 53259240 - 53259184
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaa 60  Q
    |||| ||| |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  53259240 agtaacagtgagaaacttagaggaccgaaattaattaatttttagttagaggaccaa 53259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 50508550 - 50508512
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagtta 51  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  50508550 gagaaacttaaaggaccgaaataaatcaatttttagtta 50508512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 20614179 - 20614139
Alignment:
Q  42 tttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| ||||||||  ||||||||||||||||||||    
T  20614179 tttttagttaaaggaccaaagcgataccaattaaatagtta 20614139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 56270608 - 56270568
Alignment:
Q  42 tttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| ||||||||  ||||||||||||||||||||    
T  56270608 tttttagttaaaggaccaaagcgataccaattaaatagtta 56270568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 10506296 - 10506403
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| |    
T  10506296 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaattta 10506395  T
Q  104 gccaataa 111  Q
    ||||||||    
T  10506396 gccaataa 10506403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 54107995 - 54107902
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  54107995 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagatgaccaaaaaggtaataaagcc 54107902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 24428924 - 24429031
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  24428924 gagaaacttagaagaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagatgaccaaaaaggtaattaagcc-ataat 24429022  T
Q  113 aatattaat 121  Q
    |||| ||||    
T  24429023 aataataat 24429031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 54108259 - 54108353
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| |||||    
T  54108259 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaatttagcca 54108353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 26318275 - 26318178
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaata 110  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | |||||||||||||||||||    
T  26318275 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggactaaaaaggtaattaagccaata 26318178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 39664277 - 39664184
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||    
T  39664277 gagaaacttagaggaccgaaataaatcattttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaattaagcc 39664184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 22201973 - 22202068
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||| ||||||||||||    
T  22201973 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaagataattaagccaa 22202068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 4757850 - 4757943
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |||||||||||    
T  4757850 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaattaagcc 4757943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 5900516 - 5900423
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||| |||||||||||    
T  5900516 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagatgaccaaaaatgtaattaagcc 5900423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 39241460 - 39241363
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| ||||||    
T  39241460 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaatgtaatt 39241363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 51509212 - 51509119
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||    
T  51509212 gagaaacttagaggatcgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaaggtaattaagcc 51509119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 26318540 - 26318632
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||| |||||||||| ||||    
T  26318540 agaaacttagaggaccgaaataaatcaatttttagttagaggattaatccgataccaattaaatagttagatgaccaaaaaggtaatttagcc 26318632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 44317575 - 44317667
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| |||||||||||||||||    
T  44317575 aaacttagaggaccaaaataaatcaatttttagttagaggaccaaaccgataccaattaaatagttagaggaccaaaaaggtaattaagccaa 44317667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 15986591 - 15986686
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||| | ||||| |||| ||||||||||||    
T  15986591 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaataattagaggaccaaaaagttaattaagccaa 15986686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 18464816 - 18464906
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||| | ||||| |||||||||||||||    
T  18464816 aaacttagaggaccgaaataaatcaatttttagttagaagaccaattcgataccaattaaatagttagaggaccaaaaaggtaattaagcc 18464906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 27801591 - 27801513
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27801591 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 27801513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 27801837 - 27801939
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||||||||| | ||||| ||||||||||||    
T  27801837 agtaacagtgagaaacttagaggaccgaaataaatcattttttaattagaggaccaattcgataccaattaaatagttagaggaccaaaaaggtaattaa 27801936  T
Q  104 gcc 106  Q
    |||    
T  27801937 gcc 27801939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 28986489 - 28986591
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| | ||||| |||||||||| |    
T  28986489 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttaaaggaccaatccgataccaattaaataattagaggaccaaaaaggtaattta 28986588  T
Q  104 gcc 106  Q
    |||    
T  28986589 gcc 28986591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 45307049 - 45307143
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||| | ||||| ||||||||||||||||    
T  45307049 gagaaacttagaggaccgaaataaatcaatttttagttagaggatcaatctgataccaactaaatagttagaggaccaaaaaggtaattaagcca 45307143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 53716653 - 53716743
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||| ||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||| |||||||||||||||    
T  53716653 aaacttaaaggaccgaaataaatcaatttttagttagaagaccaatctgataccaattaaatagttagatgaccaaaaaggtaattaagcc 53716743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 1994262 - 1994169
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |||||||||||    
T  1994262 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaattaagcc 1994169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 1999421 - 1999328
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |||||||||||    
T  1999421 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaattaagcc 1999328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 4773336 - 4773243
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||| |||||||| ||||| ||||||||||||||||||| | ||||| |||||||||||||||    
T  4773336 gagaaacttagaggaccgaaataaatcaatttttaattagaggatcaatctgataccaattaaatagttagaggaccaaaaaggtaattaagcc 4773243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 5900780 - 5900873
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |||||| ||||    
T  5900780 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaatttagcc 5900873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 21569102 - 21569195
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||| |||||    
T  21569102 gagaaacttagaggatcgaaataaatcaatttttagttagaggactaatccgataccaattaaatagttagaggaccaaaaaggtaatcaagcc 21569195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 1994516 - 1994616
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||| ||| ||||||||    
T  1994516 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaactaaatagttagaggaccaaaaatgtaattaa 1994615  T
Q  104 g 104  Q
    |    
T  1994616 g 1994616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 16931963 - 16932055
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagc 105  Q
    |||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||| ||||| | ||||| ||||||||||||||    
T  16931963 gagaaacttagaggacagaaataaatcaatttttagttagaggacaaatccgataccaattaaaaagttagaggaccaaaaaggtaattaagc 16932055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 44893833 - 44893729
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |  |||| |||| ||||| |||||  |||    
T  44893833 gagaaacttagaggaccgaaataaatcaatttttagttagaagaccaatccgataccaattaaatagttagagaaccaaaaagataatttagccataaat 44893734  T
Q  113 aatat 117  Q
    |||||    
T  44893733 aatat 44893729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 47669352 - 47669264
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||||    
T  47669352 gagaaacttagaggaccgaaataaattaatttttagttagaggactaatccgataccaattaaatagttagaggaccaaaaaggtaatt 47669264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 12791533 - 12791628
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||| |||| ||||| ||||||    
T  12791533 gagaaatttagaggaccgaaataaatcaatttttaattagaggaccaatccgataccaattaaatagttagaggaccaaaaagataatttagccaa 12791628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 42591886 - 42591783
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||||| |||||||||| |    
T  42591886 agtaacagtgagaaacttagaagaccgaaataaatcaatttttagttagaggacaaatccgataccgattaaatagttagaggaccaaaaaggtaattta 42591787  T
Q  104 gcca 107  Q
    ||||    
T  42591786 gcca 42591783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 45306934 - 45306831
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||| | || || |||||||||| |    
T  45306934 agtaacagtgagaaacttagaggaccgaaataaatcaaattttagttagaggactaatccgataccaattaaatagttagaggatcaaaaaggtaattta 45306835  T
Q  104 gcca 107  Q
    ||||    
T  45306834 gcca 45306831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 47669616 - 47669711
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||| |||||||||| | ||||| |||| ||||||||||||    
T  47669616 gagaaacttagaggaccgaaataaattaatttttagttagagaaccaatccgataccaaataaatagttagaggaccaaaaagataattaagccaa 47669711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 10506041 - 10505951
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||||||||||||||||| |||||||||||||||||||| ||||| |||| ||||||||||||||||||| | ||||| ||||||||||||    
T  10506041 gagaaacttagaggaccgaaataaatcaatttttagttaaaggactaatctgataccaattaaatagttagaggaccaaaaaggtaattaa 10505951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 18464558 - 18464480
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18464558 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccaataccaattaaatagtta 18464480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 28985602 - 28985508
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||| | ||||| || |||||||||||||    
T  28985602 gagaaacttataggaccgaaataaatcaaattttagttagaggaccaatctgataccaattaaatagttagaggaccaaaagggtaattaagcca 28985508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 44894097 - 44894187
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||| ||||||||||||    
T  44894097 gagaaacttagaggtccgaaataaatcaatttttagttagaggactaatctgataccaattaaatagttagaggaccaaaaaggtaattaa 44894187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 49528239 - 49528149
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||| ||||||||||||||||||||| | ||||| |||||||||||||||    
T  49528239 aaacttagaggaccaaaataaatcaatttttagctagaggaccaaaccgataccaattaaatagttagaggaccaaaaaggtaattaagcc 49528149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 4757587 - 4757494
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||| |||||||||| | ||||| ||| |||||||||||    
T  4757587 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatccgattccaactaaatagttagaggaccaaaaatgtaattaagcc 4757494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 11256460 - 11256549
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatta 102  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||||    
T  11256460 gagaaacttaaaggaccgaaataaatcattttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaaggtaatta 11256549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 32633422 - 32633515
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||| |||| ||||| ||||    
T  32633422 gagaaacttagaggaccgaaataaatcaatttttagttaaaggaccaatccgataacaattaaatagttagaggaccaaaaagataatttagcc 32633515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 53716387 - 53716318
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  53716387 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagtta 53716318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 47303373 - 47303473
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    |||||||||| ||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||| ||| |||||||| || |||||    
T  47303373 gagaaacttaaaggaccaaaataaatcaatttttacttagaggaccaatccgataccaattaaatagttagaggaccaaaaatgtaattaaacctataat 47303472  T
Q  113 a 113  Q
    |    
T  47303473 a 47303473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 13866110 - 13866023
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    ||||||| ||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||||||||    
T  13866110 aaacttaaaggaccaaaataaatcaatttttagttagaggaccaaaccgataccaattaaatagttagaggaccaaaaaggtaattaa 13866023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 21568839 - 21568744
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||| | || || |||| ||||| ||||||    
T  21568839 gagaaacttagaggaccgaaataaatcaatttttaattagaggatcaatccgataccaattaaatagttagaggatcaaaaagataatttagccaa 21568744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 29818534 - 29818625
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||| | || || |||||||||||||    
T  29818534 gagaaacttaaaggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaataattagaagatcaaaaaggtaattaag 29818625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 54752520 - 54752611
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    ||||||||||||| |||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||| | ||||| |||||||||||||    
T  54752520 gagaaacttagagcaccgaaataaatcaatttttagttagagaaccaatctgataccaactaaatagttagaggaccaaaaaggtaattaag 54752611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 8473948 - 8473870
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| ||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8473948 agtaacagtgagaaacttagagtaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagtta 8473870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 12203653 - 12203551
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||| | ||  | ||||||||||||    
T  12203653 agtaacagtgagaaacttagaggaccgaaatataccaatttttagttagatgaccaatccgataccaattaaatagttagaggataaaaaaggtaattaa 12203554  T
Q  104 gcc 106  Q
    |||    
T  12203553 gcc 12203551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 24428669 - 24428567
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||| |||||||| | ||||| |||| ||||| |    
T  24428669 agtaacagtgagaaacttagaggatcgaaataaatcaatttttagttagaggaccaatctgataccaattgaatagttagaggaccaaaaagataattta 24428570  T
Q  104 gcc 106  Q
    |||    
T  24428569 gcc 24428567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 39664541 - 39664635
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| | ||||| ||| |||||| |||||    
T  39664541 gagaaacttagaggaccgaaataaattaatttttagttagaggatcaatctgataccaattaaatagttagaggaccaaaaatgtaatttagcca 39664635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 8474206 - 8474291
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||||||||| |||||||||||||||| ||||||||| ||| |||||||||||||||||||| | ||||| ||||||||||    
T  8474206 aaacttagaggaccgaaataaatcaatttttaattagaggactaattcgataccaattaaatagttagaggaccaaaaaggtaatt 8474291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 12203908 - 12203977
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  12203908 gagaaacttagaggaccgaaataaatcaatttttaattagaggatcaatccgataccaattaaatagtta 12203977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 19883597 - 19883666
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  19883597 gagaaacttagaggaccgaaataaatcattttttagttagagaaccaatccgataccaattaaatagtta 19883666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 29818279 - 29818182
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||| ||| ||||||||||||||| || |||||||||||||||| ||||||||| |||| ||||||||||||||||||| | ||||| ||||||||||    
T  29818279 agtaacagtgagaaacttagaggatcgaaataaatcaatttttatttagaggactaatctgataccaattaaatagttagaggaccaaaaaggtaatt 29818182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 42592141 - 42592234
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||  |||||||| |||||||||| | ||||| ||| |||||||||||    
T  42592141 gagaaacttagaggatcgaaataaatcaatttttagttagaggaccaatttgataccaactaaatagttagaggaccaaaaatgtaattaagcc 42592234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 21969722 - 21969634
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| |||| | ||||||||||||||||| | ||||| ||||||||||    
T  21969722 gagaaacttagaagaccgaaataaatcaatttttagttagaggactaatctgttaccaattaaatagttagaggaccaaaaaggtaatt 21969634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 21992158 - 21992070
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| |||| | ||||||||||||||||| | ||||| ||||||||||    
T  21992158 gagaaacttagaagaccgaaataaatcaatttttagttagaggactaatctgttaccaattaaatagttagaggaccaaaaaggtaatt 21992070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 22201709 - 22201621
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||| | |||||||||||||||| |||||||| ||||||||||||||||||||||||| | ||||| ||| ||||||    
T  22201709 gagaaacttagaggacagaaataaatcaatttttatttagaggatcaatccgataccaattaaatagttagaggaccaaaaatgtaatt 22201621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 54752256 - 54752156
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    |||||||||| | ||||| |||||||||||||||||||| ||||||||||  |||||||||||||||||| | ||||| |||| ||||| ||||||||||    
T  54752256 gagaaacttatatgaccgaaataaatcaatttttagttacaggaccaatcttataccaattaaatagttagaggaccaaaaagataatttagccaataat 54752157  T
Q  113 a 113  Q
    |    
T  54752156 a 54752156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 4773590 - 4773692
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||| ||||  ||||||||||||||||||||||||| ||||| ||||||||||||||||||| | ||||| |||| | |||||    
T  4773590 agtaacagtgagaaacttagaagaccaaaataaatcaatttttagttagaggatcaatctgataccaattaaatagttagaggaccaaaaagatgattaa 4773689  T
Q  104 gcc 106  Q
    |||    
T  4773690 gcc 4773692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 15986328 - 15986234
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||||||||||| | || || |||| ||||| |||||    
T  15986328 gagaaacttagaggaccgaaataaatcaatttttagctaggggactaatccgataccaattaaatagttagaggatcaaaaagataatttagcca 15986234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 7163543 - 7163474
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| ||||||| |||||||||||||| ||||||||| ||||||||||||||||||    
T  7163543 gagaaacttagaggaccgaaataaattaatttttagttagatgaccaatccaataccaattaaatagtta 7163474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 11256196 - 11256103
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||| |||| || ||||||| | ||||||||||||||| ||||||||||||||||||||||||| | ||| | |||||||||||||||    
T  11256196 gagaaacttaaaggatcgaaataaattattttttagttagaggatcaatccgataccaattaaatagttagaggactaaaaaggtaattaagcc 11256103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 15790753 - 15790684
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||| |||||    
T  15790753 aataaatcaatttttagttagaggaccaatctgataccaattaaatagttagatgaccaaaaagataatt 15790684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 22151938 - 22151845
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||  |||| |||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||| ||| |||||| ||||    
T  22151938 gagaaacttagaaaaccgaaataaatcaatttttagttagaggactaatctgttaccaattaaatagttataggaccaaaaatgtaatttagcc 22151845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 46152708 - 46152639
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  46152708 gagaaacttagaggaccgaaataaatcaatttttagttagaggactaattcgatgccaattaaatagtta 46152639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 7681480 - 7681546
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttaga-ggaccaatccgataccaattaaata 78  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||    
T  7681480 gagaaacttagaggaccgaaataaatcaatttttagttagagggactaatccgataccaattaaata 7681546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 16931699 - 16931606
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaa-ttaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||| ||| |||||| ||||    
T  16931699 gagaaacttagaggaccgaaataaatcaatttttagttagagcaccaatccg-taccaaattaaatagttagaggaccaaaaatgtaatttagcc 16931606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 20963573 - 20963675
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| |||||||||||||| ||||||  |||||||||| |||||||||||||| ||| ||||||| |||||||||||||   ||||| ||||| ||||||    
T  20963573 agtaacagagagaaacttaaaggaccaaaataaatcaaattttagttagaggatcaaaccgatactaattaaatagttaagggaccaaaaaggcaattaa 20963672  T
Q  104 gcc 106  Q
    |||    
T  20963673 gcc 20963675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 41835019 - 41834961
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaa 71  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  41835019 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaa 41834961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 22152193 - 22152297
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaa--atagttatatgaccagaaaggtaatt 101  Q
    |||| ||| |||||||| ||||||| | ||||||||||||||||||||||||| ||||| |||||||| |||  ||||||| | ||||| ||||||||||    
T  22152193 agtaacagtgagaaactcagaggactgaaataaatcaatttttagttagaggatcaatctgataccaactaaatatagttagaggaccaaaaaggtaatt 22152292  T
Q  102 aagcc 106  Q
    |||||    
T  22152293 aagcc 22152297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 39951450 - 39951357
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||| |||| || |||||||||||||||| ||||||||| |||||||||||||||||||||| | |||| || || ||||||| ||||    
T  39951450 gagaaacttaaaggatcgaaataaatcaatttttaattagaggactaatccgataccaattaaatagtcagatgatcaaaagggtaatttagcc 39951357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 47303112 - 47303019
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||| |||||||| |||||||||  || | |||||||||||||||||| |||| || ||| |||||||||||    
T  47303112 gagaaacttagaggaccgaaataaattaatttttaattagaggactgattcaataccaattaaatagttagatgatcaaaaaagtaattaagcc 47303019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 30681781 - 30681867
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||  ||||||||| ||||||||||||||||||| | | ||||||||||||||||| | ||||| |||| ||||||||||    
T  30681781 ttagaggaccaaaataaatcattttttagttagaggaccaaactgttaccaattaaatagttagaggaccaaaaagataattaagcc 30681867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 46152967 - 46153032
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaata 78  Q
    |||||||||| ||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  46152967 gagaaacttataggaccgaaataaatcaatttttagttagagaaccaattcgataccaactaaata 46153032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 51509467 - 51509543
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtt 81  Q
    |||| ||| |||||||||||| ||||| |||||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  51509467 agtaacagtgagaaacttagatgaccgaaataaatcaatttttagttaga-gactaatccaataccaattaaatagtt 51509543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 41835283 - 41835371
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||||| |||||||||||||||| ||| || || ||| | ||| |||||||||||||| | ||||| ||||||||||    
T  41835283 gagaaacttagaggaccgaaataaatcaatttttaattaaagaactaattcaatatcaattaaatagttagaggaccaaaaaggtaatt 41835371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 42853331 - 42853236
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc-aataataat 115  Q
    ||||||||||   |||||||||||||||||||||| |||||||||||||||| ||||||| || | ||||| |||||||||| |||| |||||||||    
T  42853331 ttagaggacccacataaatcaatttttagttagagaaccaatccgataccaactaaatagataga-gaccaaaaaggtaatttagcctaataataat 42853236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 21969977 - 21970079
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaa--atagttatatgaccagaaaggtaatt 101  Q
    |||| ||| |||||||| ||||||| | ||||||| ||||||||||||||||||||||| |||||||| |||  ||||||| | ||||| ||| ||||||    
T  21969977 agtaacagtgagaaactcagaggactgaaataaatgaatttttagttagaggaccaatctgataccaactaaatatagttagaggaccaaaaatgtaatt 21970076  T
Q  102 aag 104  Q
    |||    
T  21970077 aag 21970079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 21992413 - 21992515
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaa--atagttatatgaccagaaaggtaatt 101  Q
    |||| ||| |||||||| ||||||| | ||||||| ||||||||||||||||||||||| |||||||| |||  ||||||| | ||||| ||| ||||||    
T  21992413 agtaacagtgagaaactcagaggactgaaataaatgaatttttagttagaggaccaatctgataccaactaaatatagttagaggaccaaaaatgtaatt 21992512  T
Q  102 aag 104  Q
    |||    
T  21992513 aag 21992515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 30681115 - 30681029
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||  |||||||   ||||||||||||| ||||| ||| ||||||||||||||||| ||||||| ||| |||||||||||    
T  30681115 ttagaggaccaaaataaatatttttttagttagagaaccaaaccgttaccaattaaatagttagatgaccaaaaatgtaattaagcc 30681029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 43840055 - 43839984
Alignment:
Q  11 gagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||| |||  |||||  ||||||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  43840055 gagagaaatttaagggaccaaaataaatcaatttttagttagaggatcaaaccgatactaattaaatagtta 43839984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 43844390 - 43844461
Alignment:
Q  11 gagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||| ||| |||||   ||||||||||||||||||||| ||||||| ||||||| |||||||||||||    
T  43844390 gagagaaatttaaaggacaaaaataaatcaatttttagttaggggaccaaaccgatactaattaaatagtta 43844461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 49529104 - 49529182
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| |||||||||| |||  |||||  |||||||||| |||||||||| ||||||| ||||||| |||||||||||||    
T  49529104 agtaacagagagaaatttaagggaccaaaataaatcaaattttagttaggggaccaaaccgatactaattaaatagtta 49529182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 15791466 - 15791530
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    ||||||||||  |||||| |||||||||||||||||||||||     |||||||||||||||||||||||    
T  15791466 gagaaacttaagggaccgaaataaatcaatttttagttagag-----atccgataccaattaaatagtta 15791530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 13866955 - 13867026
Alignment:
Q  11 gagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||| |||  |||||  |||||||||| |||||||||| ||||||| ||||||| |||||||||||||    
T  13866955 gagagaaatttaagggaccaaaataaatcaaattttagttaggggaccaaaccgatactaattaaatagtta 13867026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 44316701 - 44316651
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| |||||||||| |||| || ||||||| |||||||||||||    
T  44316701 aataaatcaaattttagttaggggactaaaccgatactaattaaatagtta 44316651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 967044 - 967004
Alignment:
Q  42 tttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| ||||||||  ||||||||||||||||||||    
T  967044 tttttagttaaaggaccaaagcgataccaattaaatagtta 967004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 27547762 - 27547667
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||    
T  27547762 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttaaaagaccaaaaaggtaattaagccaa 27547667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 44323017 - 44323109
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagc 105  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  44323017 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaattaagc 44323109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 1762767 - 1762673
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||    
T  1762767 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaagtaattaagcca 1762673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 8762756 - 8762849
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||| ||||    
T  8762756 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagatgaccaaaaatgtaatttagcc 8762849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 37576529 - 37576636
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| ||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||| ||||||||||||    
T  37576529 agtaacagtgagaaacttagagaaccgaaataaatcaatttttagttagaggaccaatctgataccaactaaatagttagaggaccaaaaaggtaattaa 37576628  T
Q  104 gccaataa 111  Q
    ||||||||    
T  37576629 gccaataa 37576636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 49643773 - 49643674
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| ||||||||    
T  49643773 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaatgtaattaa 49643674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 12481407 - 12481509
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||| |    
T  12481407 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaaggtaattta 12481506  T
Q  104 gcc 106  Q
    |||    
T  12481507 gcc 12481509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 16023990 - 16023896
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| |||||| |||||    
T  16023990 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaagtaatttagcca 16023896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 12127150 - 12127057
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||| | ||||| |||||||||||||||    
T  12127150 gagaaacttagaggaccgaaataaatcaatttttagttagagaaccaatccgataccaactaaatagttagaggaccaaaaaggtaattaagcc 12127057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 16024254 - 16024347
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| ||| |||||||||||    
T  16024254 gagaaacttagaggaccgaaataaatcaatttttagttagaggatcaatccgataccaattaaatagttagaggaccaaaaaagtaattaagcc 16024347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 23476698 - 23476791
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| |||||| ||||    
T  23476698 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaatgtaatttagcc 23476791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 20306093 - 20306005
Alignment:
Q  15 gaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  20306093 gaaacttagagaaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaattaa 20306005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 38000582 - 38000487
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||| | ||||| |||||||||||| ||||    
T  38000582 gagaaacttagaggaccgaaataaatcaatttttaattagaagaccaatccgataccaattaaatagttagaggaccaaaaaggtaattaaaccaa 38000487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 27548026 - 27548120
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||| | |||||||||| |||||    
T  27548026 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggacaaaaaaggtaatttagcca 27548120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 1763031 - 1763124
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||||||| ||||    
T  1763031 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatttgataccaattaaatagttagaggaccaaaaaggtaatttagcc 1763124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 26707289 - 26707196
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||| | ||||| ||||||| |||||||    
T  26707289 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccgatctgataccaattaaatagttagaggaccaaaaaggtatttaagcc 26707196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 35612442 - 35612527
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  35612442 aaacttagaggactgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaatt 35612527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 37304121 - 37304028
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| |||||||||| ||||    
T  37304121 gagaaacttagaggactgaaataaatcaatttttagttagaggaccaatccgataccaattaaatggttagaggaccaaaaaggtaatttagcc 37304028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 49140236 - 49140143
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||| |||| ||||||||||    
T  49140236 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaactaaatagttagaggaccaaaaagataattaagcc 49140143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 12481152 - 12481060
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagc 105  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| ||||||||||    
T  12481152 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaattaagc 12481060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 37467568 - 37467672
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| ||||||||||  |||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |    
T  37467568 agtaacagtgagaaacttaagggacctaaataaattaatttttagttagaggaccaatccgataccaattaaatagttagatgaccaaaaaggtaattta 37467667  T
Q  104 gccaa 108  Q
    |||||    
T  37467668 gccaa 37467672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 8760362 - 8760272
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||| || ||||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||| |||||||||||||||    
T  8760362 aaacttagaggatcgaaataaatcaatttttagttagagggtcaatccgataccaattaaatagttagaggaccaaaaaggtaattaagcc 8760272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 23476434 - 23476340
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||  |||||||||||||||||| | ||||| ||| ||||||||||||    
T  23476434 gagaaacttagtggaccgaaataaatcaatttttagttagaggaccaatctaataccaattaaatagttagaggaccaaaaaagtaattaagcca 23476340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 46593579 - 46593680
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| |||||| |    
T  46593579 agtaacagtgagaaactta-aggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaagtaattta 46593677  T
Q  104 gcc 106  Q
    |||    
T  46593678 gcc 46593680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 3089435 - 3089342
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||  |||||||||| ||||    
T  3089435 gagaaacttagaggaccgaaataaatcaatttttagttagagtaccaatccgatgccaattaaatagttagaggacccaaaaggtaatttagcc 3089342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 38127799 - 38127710
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagc 105  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||| |  |||| ||||||||||||||    
T  38127799 aaacttagaggaccgaaataaatcaatttttagttagatgaccaatccgaaaccaattaaatagttagagaaccaaaaaggtaattaagc 38127710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 45053046 - 45053139
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||| |||||| ||||    
T  45053046 gagaaacttagatgaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaaagtaatttagcc 45053139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 31703961 - 31704064
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| ||||||||    
T  31703961 agtaacagtgagaaacttataggtccaaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaattaa 31704060  T
Q  104 gcca 107  Q
    ||||    
T  31704061 gcca 31704064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 35612184 - 35612085
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| ||||||||||||||| |  ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | ||||| ||||||||||||    
T  35612184 agtaacagtgagaaacttagaggaacaaaataaatcaatttttagttagaggatcaatccgataccaattaaatacttagaggaccaaaaaggtaattaa 35612085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 37576267 - 37576180
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||| | ||||| |||||||||| |||||    
T  37576267 ttagaggaccgaaataaatcaatttttagttagaggactaatccgataccaatttaatagttaaaggaccaaaaaggtaatttagcca 37576180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 2064559 - 2064637
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| ||| ||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2064559 agtaacagtgagaaacttagagaaccgaaataaatcaatttttagttagaggatcaatccgataccaattaaatagtta 2064637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 4696984 - 4696906
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| ||| |||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4696984 agtaacagtgagaaacttagaggaccaaaataaatcaatttttagttataggaccaatccgataccaattaaatagtta 4696906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 13109191 - 13109281
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaata 110  Q
    ||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||| | |||||||||| ||||||||    
T  13109191 ttagaggaccgaaataaatcaatttttagttagaggactaatcggataccaattaaatagttagaggactaaaaaggtaatttagccaata 13109281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 23598165 - 23598072
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||| |||| ||||| ||||    
T  23598165 gagaaatttagaggactgaaataaatcaatttttagttagaggaccaattcgataccaattaaatagttagaggaccaaaaagataatttagcc 23598072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 25995886 - 25995789
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||| ||| |||||||||| ||||||| |||||||||||||||| ||| |||||||||| ||||||||||||||||||| | ||||| ||||||||||    
T  25995886 agtaacagtgagaaacttaaaggaccgaaataaatcaatttttaattaaaggaccaatctgataccaattaaatagttagaggaccaaaaaggtaatt 25995789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 34967079 - 34967148
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34967079 gagaaacttaatggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 34967148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 37304385 - 37304454
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  37304385 gagaaacttagaggaccgaaataaatcaatttttagttataggatcaatccgataccaattaaatagtta 37304454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 6798164 - 6798252
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||| |||||    
T  6798164 gagaaatttagaggatcgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaagaccaaaaagataatt 6798252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 45843474 - 45843562
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||  |||||||||||||||||| | ||||| ||| ||||||    
T  45843474 gagaaacttagaggatcgaaataaatcaatttttagttagaggaccaatctaataccaattaaatagttagaggaccaaaaatgtaatt 45843562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 9006281 - 9006194
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    ||||||||| ||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||| | ||||| |||| |||||||    
T  9006281 aaacttagatgaccgaaataaatcaatttttagttaaaggatcaatccgataccaattaaatagttagaggaccaaaaagataattaa 9006194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 10831210 - 10831131
Alignment:
Q  27 accggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||| |||||||||| ||||    
T  10831210 accgaaataaatcaatttttagttagaggaccaattcgataccaattaaatagttagaggaccaaaaaggtaatttagcc 10831131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 32047829 - 32047738
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataa 111  Q
    ||||||||||  ||||||||| ||||||||||||||||||| ||| ||||||||||||||||| | ||||| ||||||||||||||| ||||    
T  32047829 ttagaggaccaaaataaatcattttttagttagaggaccaaaccgttaccaattaaatagttagaggaccaaaaaggtaattaagcctataa 32047738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 49644029 - 49644120
Alignment:
Q  15 gaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||| ||||||||||||||||||| | ||||| |||| ||||| ||||    
T  49644029 gaaacttagaggaccgaattaaatcaatttttaattagaggaccaatctgataccaattaaatagttagaggaccaaaaagataatttagcc 49644120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 26723158 - 26723256
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataa 111  Q
    |||||||||||||||||  |||||||||||||||||||||| || ||||| ||||||||||||||||||| | || || |||||||||| |||| ||||    
T  26723158 gagaaacttagaggaccaaaataaatcaatttttagttagatgatcaatctgataccaattaaatagttagaggatcaaaaaggtaatttagcctataa 26723256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 45052792 - 45052690
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||| ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||  | || || |||| |||||||    
T  45052792 agtaacagtgagaaacttataggaccgaaataaatcaatttttagttagaggatcaatctgataccaattaaatagtttgaagatcaaaaagataattaa 45052693  T
Q  104 gcc 106  Q
    |||    
T  45052692 gcc 45052690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 34966405 - 34966308
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||| ||| ||||||||||  |||| | |||||||||| |||||||||||||||||||||||||||||||||||||||| | | ||| ||||||||||    
T  34966405 agtaacagtgagaaacttaagggactgaaataaatcaagttttagttagaggaccaatccgataccaattaaatagttagaggtccaaaaaggtaatt 34966308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 39486295 - 39486226
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39486295 gagaaacttaaacgaccgaaataaatcaatttttagttagaggaccaatccaataccaattaaatagtta 39486226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 10831943 - 10832031
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||| ||| ||||||    
T  10831943 gagaaacttaagggaccgaaataaatcaatttttagttagaggaccaatccaataccagttaaatagttagaggaccaaaaaagtaatt 10832031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 49140491 - 49140594
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||| ||||||| |||||||||||||| ||||||||||| |||| ||||||||||||||||||| | ||||| |||| ||||| |    
T  49140491 agtaacagtgagaaacttataggaccgaaataaatcaatttt-agttagaggactaatctgataccaattaaatagttagaggaccaaaaagataattta 49140589  T
Q  104 gccaa 108  Q
    |||||    
T  49140590 gccaa 49140594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 4330195 - 4330282
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||| ||| | ||| | ||||||||||    
T  4330195 agaaacttagaggaccgaaataaatcaatttttagttagagggttaatccgataccaattaaataattagaggacaaaaaaggtaatt 4330282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 4697163 - 4697222
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatag 79  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4697163 ttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatag 4697222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 37285084 - 37285179
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||| |||||| | || |||||||||||||||||||||||||||||||  |||||||||||||||||| | ||||| ||| |||||| ||||||    
T  37285084 gagaaatttagagaatcgaaataaatcaatttttagttagaggaccaatctaataccaattaaatagttaaaggaccaaaaatgtaatttagccaa 37285179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 5537152 - 5537230
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| ||| ||||| ||||  |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5537152 agtaacagtgagaatcttaagggaccgaaataaatcaatttttagttagaggaccaatccgataccgattaaatagtta 5537230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 13183852 - 13183762
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaata 110  Q
    ||||||||||| |||||||||||||||||||||| ||| ||| | |||||||||||||||||| | || || |||||||||| ||||||||    
T  13183852 ttagaggaccgaaataaatcaatttttagttagaagactaattcaataccaattaaatagttagaggatcaaaaaggtaatttagccaata 13183762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 37585786 - 37585696
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||||| |||||||| || ||||||||||||||||||||||||| |||||  |||||||||||||||||| | ||||| ||| ||||||||    
T  37585786 gagaaatttagaggatcgaaataaatcaatttttagttagaggatcaatctaataccaattaaatagttagaggaccaaaaaagtaattaa 37585696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 9006547 - 9006640
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||| ||||| |  |||||||||||||||||||||||||||||||||||| | |||||||||||| | ||||| |||| ||||| ||||    
T  9006547 gagaaacttggaggatccaaataaatcaatttttagttagaggaccaatccgataacgattaaatagttagaagaccaaaaagataatttagcc 9006640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 37284821 - 37284752
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| | ||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  37284821 gagaaacttaaatgaccgaaataaatcaatttttagttagagaaccaatccgatatcaattaaatagtta 37284752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 6797900 - 6797809
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    |||||||||||||||||| |||||||||||||||| ||||| || ||||| |||| |||||||||||||| |  |||| ||| |||||||||    
T  6797900 gagaaacttagaggaccgaaataaatcaatttttaattagaagatcaatctgatatcaattaaatagttagagaaccaaaaaagtaattaag 6797809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 20306350 - 20306452
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||| ||||||  ||||||||||| ||||||| ||||| ||||| |||||||||||| |||||| | ||||| | ||||||||||    
T  20306350 agtaacagtgagaaacttaaaggaccaaaataaatcaatctttagttggaggatcaatctgataccaattaactagttagaggaccaaagaggtaattaa 20306449  T
Q  104 gcc 106  Q
    |||    
T  20306450 gcc 20306452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 12127411 - 12127482
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagagg---accaatccgataccaattaaatagtta 82  Q
    ||||||||||||||||| |||||||||||||||| |||||||   || ||||||||||||||||||||||||    
T  12127411 agaaacttagaggaccgaaataaatcaatttttaattagaggagaactaatccgataccaattaaatagtta 12127482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 37586053 - 37586138
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||| ||||| ||||||| |||||||| |||||||| |||||||||||||||||| |||||| ||||| | |||| |||||    
T  37586053 aaacttagaagaccgaaataaattaatttttaattagaggatcaatccgataccaattaagtagttagatgacaaaaaagataatt 37586138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 28884103 - 28884020
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    ||||||||||  ||||||| | ||||||||||||||||||| ||| ||||||||||||| ||| | ||||| ||||||||||||    
T  28884103 ttagaggaccaaaataaattattttttagttagaggaccaaaccgttaccaattaaataattagaggaccaaaaaggtaattaa 28884020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 5536472 - 5536422
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  5536472 aataaatcaaattttaggtagaggaccaatccgataccaattaaatagtta 5536422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 46289397 - 46289327
Alignment:
Q  33 ataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||| | || || |||| |||||||    
T  46289397 ataaatcaatttttagttagatgaccaatctgataccaattaaatagttagaggatcaaaaagataattaa 46289327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 46592914 - 46592817
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||| ||| ||||||||||  ||| || ||||||||| ||||||||||||||| ||||| |||| |||||||||||||| | | ||| ||||||||||    
T  46592914 agtaacagtgagaaacttaagggatcgaaataaatcattttttagttagaggatcaatctgatatcaattaaatagttagagggccaaaaaggtaatt 46592817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 49838756 - 49838836
Alignment:
Q  26 gaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    ||||| |||||||||||||||||||||| |||||||| ||||||||||||||| ||| | | ||| |||||||||| |||||    
T  49838756 gaccgaaataaatcaatttttagttagaagaccaatctgataccaattaaataatta-aaggccaaaaaggtaatttagcca 49838836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 31703707 - 31703660
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaa 60  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  31703707 gagaaacttaaaggaccgaaataaatcaatttttagttagaggaccaa 31703660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 39486568 - 39486623
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatga 87  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||||| ||||    
T  39486568 aataaatcaatttttagttagaggaacaattcaataccaattaaatagttagatga 39486623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 28884799 - 28884871
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    ||||||||| ||||||||||||||||||| |||  |||||||||||||||| | ||||| ||| | |||||||    
T  28884799 aataaatcattttttagttagaggaccaaaccgtaaccaattaaatagttagaggaccaaaaaagcaattaag 28884871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 32048558 - 32048630
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    ||||||||| ||||||||||||||||||| ||| || ||| |||||||||| | ||||| ||| |||||||||    
T  32048558 aataaatcattttttagttagaggaccaaaccgttatcaaataaatagttagaggaccaaaaaagtaattaag 32048630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 49837464 - 49837417
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaa 60  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||    
T  49837464 gagaaacttaagggaccgaaataaatcaatttttagttagaggaccaa 49837417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 37466876 - 37466831
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaat 77  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||    
T  37466876 aataaatcaatttttagttagagcagtaatccgataccaattaaat 37466831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 45843366 - 45843318
Alignment:
Q  59 aatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||||||||| | || || |||||||||||||||||    
T  45843366 aatccgataccaattaaatagttagaggatca-aaaggtaattaagccaa 45843318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 52179365 - 52179405
Alignment:
Q  42 tttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| ||||||||  ||||||||||||||||||||    
T  52179365 tttttagttaaaggaccaaagcgataccaattaaatagtta 52179405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 20842 - 20740
Alignment:
Q  15 gaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc-aataata 113  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||||||||| |||||||    
T  20842 gaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagatgaccaaaaatgtaattaagcctaataata 20743  T
Q  114 ata 116  Q
    |||    
T  20742 ata 20740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 2517359 - 2517453
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||||||||    
T  2517359 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaaggtaattaagcca 2517453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 17244754 - 17244656
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataataa 114  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| |||||||||||||||||||||||    
T  17244754 aaacttagaggaccaaaataaatcaatttttagttagaggaccaaaccgataccaattaaatagttagaggaccaaaaaggtaattaagccaataataa 17244656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 5938170 - 5938258
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||    
T  5938170 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaataattagatgaccaaaaaggtaatt 5938258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 32753521 - 32753621
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| ||||||||||||    
T  32753521 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggatcaatccgataccaattaaatagttagaggaccaaaaaggtaattaa 32753620  T
Q  104 g 104  Q
    |    
T  32753621 g 32753621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 6137734 - 6137825
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  6137734 gagaaacttagaggaccgaaataaatcaatttttagttaaaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaattaag 6137825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 35167583 - 35167488
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| | ||||| |||||||||||||||||    
T  35167583 gagaaacttagaggaccgaaataaatcaatttttagttagaggatcaatccgataccaactaaatagttagaggaccaaaaaggtaattaagccaa 35167488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 3423272 - 3423170
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||| || |||||||||    
T  3423272 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagagaaccaaaatggtaattaa 3423173  T
Q  104 gcc 106  Q
    |||    
T  3423172 gcc 3423170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 9046434 - 9046536
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||||| | ||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| ||||||||||||    
T  9046434 agtagcggtgagaaacttagcggaccgaaataaatcaatttttagttagaggaccaatccaataccaattaaatagttagaggaccaaaaaggtaattaa 9046533  T
Q  104 gcc 106  Q
    |||    
T  9046534 gcc 9046536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 34994473 - 34994383
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| ||||||||||||    
T  34994473 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccaataccaattaaatagttaaaggaccaaaaaggtaattaa 34994383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 18053310 - 18053409
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||| |||||| |||||    
T  18053310 gagaaacttagagtaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaaggtaactaagcctataat 18053409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 6137480 - 6137379
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  6137480 agtaacagtgagaaacttagaggaccgaaataaatca-tttttaattagaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaattaa 6137382  T
Q  104 gcc 106  Q
    |||    
T  6137381 gcc 6137379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 18053058 - 18052980
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18053058 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 18052980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 34890992 - 34891093
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||| ||||||||    
T  34890992 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggacca-aaaagtaattaa 34891090  T
Q  104 gcc 106  Q
    |||    
T  34891091 gcc 34891093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 21856648 - 21856555
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |||||||||||    
T  21856648 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaattaagcc 21856555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 2517094 - 2517007
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||| ||||||    
T  2517094 agaaacttagaggaccgaaataaatcaatttttagttagaggactaatccgataccaattaaatagttagaggaccaaaaatgtaatt 2517007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 5937915 - 5937816
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||| | ||||| ||||||||||||    
T  5937915 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagagaatcaatctgataccaattaaatagttagaggaccaaaaaggtaattaa 5937816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 15932913 - 15933004
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |||||||||    
T  15932913 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaattaag 15933004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 25176756 - 25176665
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |||||||||    
T  25176756 gagaaacttagaggaccataataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaattaag 25176665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 32993372 - 32993479
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||  ||||| |||| ||||     
T  32993372 gagaaacttataggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaatataatttagcctataac 32993471  T
Q  113 aatattaa 120  Q
    ||| ||||    
T  32993472 aatgttaa 32993479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 34994728 - 34994831
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| ||||||||||||||| || |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||| | |||||||||| |    
T  34994728 agtaacagtgagaaacttagaggatcgaaataaatcaatttttagttagaggaccaatctaataccaattaaatagttagatgactaaaaaggtaattta 34994827  T
Q  104 gcca 107  Q
    ||||    
T  34994828 gcca 34994831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 6532285 - 6532187
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataa 111  Q
    |||||| |||||| |||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||| | ||| | ||||||||||||||||||||    
T  6532285 gagaaatttagagaaccgaaataaatcaatttttagttagaggatcaatccgatacaaattaaatagttagaggacaaaaaaggtaattaagccaataa 6532187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 978508 - 978415
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||||||| | ||||| ||| |||||||||||    
T  978508 gagaaacttagaggaccgaaataaatcaatttttagttagaggatcaatacgataccaactaaatagttagaggaccaaaaatgtaattaagcc 978415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 7270986 - 7271079
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||| | |||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||| ||||| |||||||||    
T  7270986 gagaaacttagaggactgaaataaatcaatttttagttagaggactaatctgataccaattaaatagttagaggaccaaaaaggcaattaagcc 7271079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 15932823 - 15932730
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||| ||||    
T  15932823 gagaaacttagaggatcaaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaaggtaatttagcc 15932730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 21856912 - 21857005
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||| ||| | ||||| |||||||||| ||||    
T  21856912 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatccgataccaactaaatacttagaggaccaaaaaggtaatttagcc 21857005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 32753270 - 32753173
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaata 110  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||||||||||| | ||||| ||| |||||| ||||||||    
T  32753270 gagaaacttagaggaccgaaataaatcaatttttagttagaggatcaatctgatactaattaaatagttagaggaccaaaaatgtaatttagccaata 32753173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 9046176 - 9046084
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||| | ||||| ||| |||||| ||||||    
T  9046176 aaacttagaggaccgaaataaatcaatttttacttagaggaccaatctgataccaattaaatagttagaggaccaaaaaagtaatttagccaa 9046084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 26957321 - 26957413
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||||||  |||||||||||||||||| ||||||| |||| ||||||||||||    
T  26957321 aaacttaaaggaccgaaataaatcaatttttagttaaaggaccaatctaataccaattaaatagttagatgaccaaaaagataattaagccaa 26957413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 5311183 - 5311274
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||| |||||||| ||||    
T  5311183 gagaaacttagagcaccgaaataaatcaatttttagttagaggaccaatctgataccaactaaatagttagaggaccaaaaaggtaactaag 5311274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 10412858 - 10412949
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    |||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||| |||||||||| | ||||| |||| ||||||||    
T  10412858 gagaaacttagaggaccgaaataaatcaatttttagttagagaactaatccgataccaactaaatagttaaaagaccaaaaagataattaag 10412949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 25180219 - 25180298
Alignment:
Q  27 accggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||| ||||    
T  25180219 accgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccagaaaggtaatttagcc 25180298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 34518049 - 34518144
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    ||||||||||  ||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||| |||||||||| ||||||    
T  34518049 gagaaacttaagggatcgaaataaatcaatttttagtttgaggaccaatccgataccaattaaatagttagaggaccaaaaaggtaatttagccaa 34518144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 6228804 - 6228722
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataataa 114  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||| | |||||||||||||||||||||||    
T  6228804 aataaatcaatttttagttagaggaccaaaccgataccaattaaataattagaggactaaaaaggtaattaagccaataataa 6228722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 14276492 - 14276402
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||||| ||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||| || | ||||| ||||||||||||    
T  14276492 gagaaatttagaggaccgaagtaaatcaatttttagttagaggatcaatccgataccaattaaataggtagaggaccaaaaaggtaattaa 14276402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 31238113 - 31238198
Alignment:
Q  22 agaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||| | ||||| |||||||||||||||||    
T  31238113 agaggaccgaaataaatcaatttttagttagag-accaatccgataccaactaaatagttagaggaccaaaaaggtaattaagccaa 31238198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 31247482 - 31247568
Alignment:
Q  22 agaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    ||||||| | ||||||| |||||||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||||    
T  31247482 agaggactgaaataaattaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaaggtaattaagccaa 31247568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 6236014 - 6235921
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||| |||| ||||||||||||||||||| | ||||| |||||||||| ||||    
T  6236014 gagaaacttagaggaccgaaataaatcaatttttaattataggactaatctgataccaattaaatagttagaggaccaaaaaggtaatttagcc 6235921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 7270044 - 7269975
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7270044 gagaaacttagagaaccgaaataaatcaatttttagttagaggaccaatccaataccaattaaatagtta 7269975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 7438897 - 7438804
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||| ||||| ||||    
T  7438897 gagaaacttaagggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaagataatttagcc 7438804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 34517365 - 34517272
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||| ||| |||||| ||||    
T  34517365 gagaaacttaagggaccgaaataaatcaatttttagttagaggaccaatccgacaccaattaaatagttagaggaccaaaaaagtaatttagcc 34517272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 34890737 - 34890644
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||| | || || |||||||||| ||||    
T  34890737 gagaaactttgaggaccaaaataaatcaatttttagttagaggaccaatccaataccaattaaatagttagaggaacaaaaaggtaatttagcc 34890644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 5639531 - 5639599
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  5639531 agaaacttagaggaccgaaataaataaatttttagttagaggactaatccgataccaattaaatagtta 5639599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 29260624 - 29260536
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||||  |||||| ||||||| ||||||||||| ||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  29260624 gagaaacttaagggaccgaaataaattaatttttagtttgaggaccaatctgataccaattaaatagttagaggaccagaaaggtaatt 29260536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 31237839 - 31237751
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||| | ||||| ||| ||||||    
T  31237839 gagaaacttagaagaccgaaataaatcaatttttagttagagaactaatccgataccaattaaatagttagaggaccaaaaaagtaatt 31237751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 24744419 - 24744352
Alignment:
Q  15 gaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24744419 gaaagttagaggaccgaaataaatcaatttttagttagaggactaatccgataccaattaaatagtta 24744352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 6236279 - 6236369
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||  ||| ||||||||||||||   ||||| ||| |||||||||    
T  6236279 agaaacttagaggaccgaaataaatcaatttttagttagaggaccaatcaaatatcaattaaatagttaggggaccaaaaaagtaattaag 6236369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 21540334 - 21540428
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgacc-agaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| |||| ||||||||||||||||||| | |||| | |||||||||| ||||    
T  21540334 gagaaacttagaggaccgaaataaatcaatttttaattagaggactaatctgataccaattaaatagttaaaggaccaaaaaaggtaatttagcc 21540428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 26600447 - 26600357
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||| |||||||| | ||||| |||| ||||| ||||    
T  26600447 aaacttagaggaccgaaataaattaatttttagttagaggactaatccgataccaatttaatagttagaggaccaaaaagataatttagcc 26600357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 26600695 - 26600773
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  26600695 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaagaccaatccaataccaactaaatagtta 26600773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 5310928 - 5310819
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||| ||||| |||||||||||||||||||| ||||| | || |||| |||||||||||||| | ||||| |||| ||||| |    
T  5310928 agtaacagtgagaaacttagatgaccgaaataaatcaatttttagttataggactactctgatatcaattaaatagttagaggaccaaaaagataattta 5310829  T
Q  104 gccaataata 113  Q
    ||||||||||    
T  5310828 gccaataata 5310819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 31247209 - 31247121
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||||||  |||| ||||||||||||||||||||||| || |||||||||||||||||||||||| | ||||| ||| ||||||    
T  31247209 gagaaacttagaacaccgaaataaatcaatttttagttagagaactaatccgataccaattaaatagttagaggaccaaaaaagtaatt 31247121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 32993108 - 32993017
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaag 104  Q
    |||||||||||||||||  |||||||||||||||| ||||| ||||||||  |||||||||||||||||| | |||||  ||||||||||||    
T  32993108 gagaaacttagaggaccaaaataaatcaatttttacttagatgaccaatctaataccaattaaatagttagaggaccaagaaggtaattaag 32993017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 29261299 - 29261377
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| ||| ||||||||||  ||||||  ||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  29261299 agtaacagtgagaaacttaagggaccgacataaatcaatttttagttagaggaccaatctaataccaattaaatagtta 29261377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 7270310 - 7270403
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||| |||||| |||  || |||| ||||||||||||||||| |||| |||||||||||||||||||| | ||||| |||| ||||||||||    
T  7270310 gagaaatttagagaaccaaaaaaaattaatttttagttagaggatcaattcgataccaattaaatagttaaaggaccaaaaagataattaagcc 7270403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 15286419 - 15286350
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||| | || || ||||||||||    
T  15286419 aataaatcaatttttagtcagaggaccaatccgacaccaattaaatagttagaggatcaaaaaggtaatt 15286350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 35167833 - 35167905
Alignment:
Q  34 taaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||| ||| |||||| ||||    
T  35167833 taaatcaatttttagttagaggactaatctgataccaattaaatagttagaggaccaaaaatgtaatttagcc 35167905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 3035973 - 3035926
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaa 60  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||    
T  3035973 gagaaacttagaggaccgaaataaatcaatttttagttagaagaccaa 3035926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 24744697 - 24744771
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    ||||||||||||||||||||||||||||||   ||||||| |||||||||| | ||||| |||| |||||||||||    
T  24744697 aataaatcaatttttagttagaggaccaat-taataccaactaaatagttagaggaccaaaaagataattaagcca 24744771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 27829329 - 27829415
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    ||||||||||  ||||||||| |||||| |||||||||||| | | ||||||||||||||||  | ||||| ||||||||||||||||    
T  27829329 ttagaggaccaaaataaatcattttttaattagaggaccaaactgttaccaattaaatagttggaggacca-aaaggtaattaagcca 27829415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 6229671 - 6229773
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| |||||||||| |||  |||||  |||||||||| |||||||||| ||||||| ||||||| |||||||||||||   ||||| ||||| |||| |    
T  6229671 agtaacagagagaaatttaagggaccaaaataaatcaaattttagttag-ggaccaaaccgatactaattaaatagttaagggaccaaaaaggcaattta 6229769  T
Q  104 gcca 107  Q
    ||||    
T  6229770 gcca 6229773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 26957054 - 26957015
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttaga 53  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  26957054 agaaacttagaggaccgaaataaatcaatttttagttaga 26957015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 34251645 - 34251582
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaata 78  Q
    ||||||||||||||| || ||||||| ||||||||||   ||||| ||||||||||||| ||||||    
T  34251645 gagaaacttagaggatcgaaataaattaatttttagt--caggactaatccgataccaactaaata 34251582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 1158662 - 1158582
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    |||||||| | ||||| ||| ||||||||  |||||| |  |||||||||| | ||||| ||| |||||||||||||||||    
T  1158662 aataaatcgaattttaattaaaggaccaaagcgatactacctaaatagttaaaggaccaaaaatgtaattaagccaataat 1158582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 22498448 - 22498408
Alignment:
Q  42 tttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| ||||||||  ||||||||||||||||||||    
T  22498448 tttttagttaaaggaccaaagcgataccaattaaatagtta 22498408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 72855 - 72762
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||    
T  72855 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaaggtaattaagcc 72762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 73118 - 73211
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |||||||||||    
T  73118 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaattaagcc 73211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 7496082 - 7495980
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| ||||||||    
T  7496082 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaattaa 7495983  T
Q  104 gcc 106  Q
    |||    
T  7495982 gcc 7495980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 38333028 - 38333134
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| |||| |||||||    
T  38333028 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggatcaatccgataccaattaaatagttagaggaccaaaaagataattaa 38333127  T
Q  104 gccaata 110  Q
    | |||||    
T  38333128 gtcaata 38333134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 15405849 - 15405756
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| |||||||||||    
T  15405849 gagaaacttagaagaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaatgtaattaagcc 15405756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 24372060 - 24371967
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||| |||||||||||||||    
T  24372060 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaactaaatagttagaggaccaaaaaggtaattaagcc 24371967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 13193090 - 13192982
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||| |||||| |    
T  13193090 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaaagtaattta 13192991  T
Q  104 gccaataat 112  Q
    ||| |||||    
T  13192990 gcctataat 13192982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 8173978 - 8173879
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||| | ||||| |||||||||||| || |||||    
T  8173978 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgatatcaattaaatagttagaggaccaaaaaggtaattaaacctataat 8173879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 15744549 - 15744462
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||    
T  15744549 agaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaaggtaatt 15744462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 17032686 - 17032593
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||| ||||| ||||    
T  17032686 gagaaacttcgaggaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaagataatttagcc 17032593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 24138161 - 24138068
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||| ||||    
T  24138161 gagaaacttagtggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaaggtaatttagcc 24138068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 34735691 - 34735796
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||| |||||| |    
T  34735691 agtaacagtgagaaacttaaaggaccgaaataaatcaatttttagttagaggactaatccgataccaattaaatagttagaggaccaaaaatgtaattta 34735790  T
Q  104 gccaat 109  Q
    ||||||    
T  34735791 gccaat 34735796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 12860473 - 12860381
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagc 105  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| ||||||||||    
T  12860473 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaattaagc 12860381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 26181793 - 26181701
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagc 105  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| || ||||||||||||||| | ||||| ||||||||||||||    
T  26181793 gagaaacttagaggaccgaaataaatcaatttttagttagtggaccaatccaattccaattaaatagttagaggaccaaaaaggtaattaagc 26181701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 15406114 - 15406212
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataata 113  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| | || || |||||||||| |||||| ||||    
T  15406114 agaaacttagaggaccgaaataaatcaatttttagttagaggaccaatccaataccaattaaatagttagagga-caaaaaggtaatttagccaaaaata 15406212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 15744804 - 15744899
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||| ||| |||||||||||||    
T  15744804 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatctgataccaactaaatagttagaggaccaaaaatgtaattaagccaa 15744899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 19816063 - 19816154
Alignment:
Q  15 gaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||| |||||||||| ||||    
T  19816063 gaaacttagaggaccgaaataaatcaatttttagttagaggactaatccgataccaattaaatagtttgaggaccaaaaaggtaatttagcc 19816154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 29472335 - 29472240
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||  |||||||| |||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||| ||||||    
T  29472335 gagaaacttagaggaccaaaataaatctatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaaggtaattgagccaa 29472240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 41474430 - 41474533
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||| | ||||| |||| |||||||    
T  41474430 agtaacagtgagaaactcagaggaccgaaataaatcaatttttagttagaggactaatccgataccaattaaataattagaggaccaaaaagataattaa 41474529  T
Q  104 gcca 107  Q
    ||||    
T  41474530 gcca 41474533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 19815797 - 19815707
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||| | ||||| ||| ||||||||    
T  19815797 gagaaacttagaggaccgaaataaatcaatttttagttagagaaccaatccgataccaactaaatagttagaggaccaaaaatgtaattaa 19815707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 33470271 - 33470373
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||| |||||| ||||| |||||||| |||||||||| | ||||| ||||||||||||    
T  33470271 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagtcagaggatcaatctgataccaactaaatagttagaggaccaaaaaggtaattaa 33470370  T
Q  104 gcc 106  Q
    |||    
T  33470371 gcc 33470373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 7496336 - 7496429
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | ||| |||||||||||    
T  7496336 gagaaacttaaaggaccgaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggactaaaaatgtaattaagcc 7496429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 13193345 - 13193438
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||| | ||||| |||  ||||||||||    
T  13193345 gagaaacttagaggaccgaaataaatcaatttttagttagaggatcaatctgataccaattaaatagttagaggaccaaaaatataattaagcc 13193438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 17051022 - 17050929
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| |||| ||||| ||||    
T  17051022 gagaaacttcgaggaccgaaataaatcaatttttagttagaggaccaatccaataccaattaaatagttagaggaccaaaaagataatttagcc 17050929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 19847675 - 19847768
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||||| |||||||||| ||||||| ||| |||||||||||    
T  19847675 gagaaacttagaagaccgaaataaattaatttttagttagaggaccaatccaataccaactaaatagttagatgaccaaaaatgtaattaagcc 19847768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 7469259 - 7469171
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| | | ||| ||||||||||    
T  7469259 gagaaacttagaggaccgaaataaatcaatttttagttagaggactaatctgataccaattaaatagttagagggccaaaaaggtaatt 7469171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 38332797 - 38332697
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataat 112  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||| |  |||| ||| |||||| |||||| |||    
T  38332797 gagaaacttagaggaccgaaataaatcaatttttagttagaggatcaatccaataccaattaaatagttagagaaccaaaaatgtaatttagccaagaat 38332698  T
Q  113 a 113  Q
    |    
T  38332697 a 38332697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 26182048 - 26182151
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||| ||| | ||||| ||| |||||| |    
T  26182048 agtaacagtgagaaacttagagggccgaaataaatcaatttttagttagaggaccaatccgatatcaattaaataattaaaggaccaaaaatgtaattta 26182147  T
Q  104 gcca 107  Q
    ||||    
T  26182148 gcca 26182151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 30898658 - 30898753
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    ||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| |||||||| ||||    
T  30898658 gagaaacttagaggaacaaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaattaaaccaa 30898753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 10991937 - 10991851
Alignment:
Q  20 ttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||| | ||||| |||||||||| ||||    
T  10991937 ttagaggaccgaaataaatcaatttttagttagaggatcaatctgataccaattaaatagttagaggaccaaaaaggtaatttagcc 10991851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 16305118 - 16305048
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggacc-aatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16305118 gagaaacttagaggaccgaaataaatcaatttttagttagaggaccaaatccgataccaattaaatagtta 16305048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 16305382 - 16305476
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||| | || || |||| |||||| ||||    
T  16305382 gagaaacttagaggattgaaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggatcaaaaagataattatgcca 16305476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 24372324 - 24372417
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||| ||| |||||| ||||    
T  24372324 gagaaacttagaggaccaaaataaatcaatttttagttagaggactaatctgataccaattaaatagttagaggaccaaaaatgtaatttagcc 24372417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 34735436 - 34735343
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||||||| | ||||| |||| | ||||||||    
T  34735436 gagaaacttagaggaccgaaataaatcaatttttagttagaggatcaattcgataccaactaaatagttagaggaccaaaaagattattaagcc 34735343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 2148243 - 2148318
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgac 88  Q
    |||||||||| ||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  2148243 gagaaacttaaaggaccaaaataaatcaatttttagttagaggatcaatccgataccaattaaatagttaaatgac 2148318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 42834515 - 42834452
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaa 76  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  42834515 gagaaacttagagaaccgaaataaatcaatttttagttagaggaccaatccgataccaattaaa 42834452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 8444915 - 8444825
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||||||||||||||||| ||||||| ||||||||||||||  |||||||||||| ||| |||||||||| | ||||| ||||||||||||    
T  8444915 gagaaacttagaggaccgaaataaattaatttttagttagataaccaatccgatatcaactaaatagttagaagaccaaaaaggtaattaa 8444825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 7469515 - 7469612
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaata 110  Q
    |||||||||||| ||| | ||||||||||||||||||||||| ||||||| |||||||| |||||||||| |  |||| |||||||||||| ||||||    
T  7469515 gagaaacttagacgactgaaataaatcaatttttagttagagaaccaatctgataccaactaaatagttagagaaccaaaaaggtaattaaaccaata 7469612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 8174242 - 8174335
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||| ||| ||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||| ||||| ||||    
T  8174242 gagaaatttaaaggaccgaaataaattaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaaaagataatttagcc 8174335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 17052411 - 17052480
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  17052411 gagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatctaataccaattaaatagtta 17052480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 29472599 - 29472692
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||| ||||||||||  ||||||||||||||| ||||||||| |||||| |||||||||||||||||| | ||||| ||||||| |||||||    
T  29472599 gagaaatttagaggaccaaaataaatcaattttttgttagaggatcaatccaataccaattaaatagttagaggaccaaaaaggtatttaagcc 29472692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 41474175 - 41474087
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||||||||||||||| ||||||| |||||||| ||| |||||| ||||||||||||||||||||||| | ||||| ||| ||||||    
T  41474175 gagaaacttagaggaccgaaataaataaatttttaattacaggaccgatccgataccaattaaatagttagaagaccaaaaatgtaatt 41474087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 2147979 - 2147888
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaattttt-agttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||||||||||||| ||| ||||||||| ||||| |||||||||||||||| ||||| ||||||||||||| | ||||| ||||||||||||    
T  2147979 gagaaacttagaggcccgaaataaatcatttttttagttagaggaccaatctgatactaattaaatagttagaggaccaaaaaggtaattaa 2147888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 8963174 - 8963268
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    ||||||||||  |||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||| |  |||| ||| |||||| |||||    
T  8963174 gagaaacttaagggaccaaaataaatcaatttttagttagagaaccaatccgataccaattaaatagttagagaaccaaaaaagtaatttagcca 8963268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 36713681 - 36713587
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||| |||||||||   |||||||||||||||||||||| || ||||||||||||||||||||||||| | || || |||||||||| |||||    
T  36713681 gagaaatttagaggacataaataaatcaatttttagttagaagatcaatccgataccaattaaatagttagaggatcaaaaaggtaatttagcca 36713587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 8962441 - 8962365
Alignment:
Q  25 ggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||| | ||||| |||| |||||    
T  8962441 ggaccgaaataaatcaatttttagttagaggaccaatctgatactaattaaatagttagaggaccaaaaagataatt 8962365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 24138855 - 24138959
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||| ||||| |||||||||||||||| ||| || || |||  ||||||||||||||||||| |  |||| ||||||||||||    
T  24138855 agtaacagtgagaaacttagaagaccgaaataaatcaatttttaattaaagtactaatttgataccaattaaatagttagaataccaaaaaggtaattaa 24138954  T
Q  104 gccaa 108  Q
    |||||    
T  24138955 gccaa 24138959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 8445149 - 8445234
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||||||||| | |||||||||||||| ||||||  | |||||||||||||||||||||||| | ||| | ||||||||||    
T  8445149 aaacttagaggaccgaagtaaatcaatttttaattagagtgctaatccgataccaattaaatagttagaggacaaaaaaggtaatt 8445234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 12860727 - 12860771
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaa 60  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  12860727 aaacttagaggaccgaaataaatcaatttttagttagaggaccaa 12860771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 10992208 - 10992255
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaa 60  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  10992208 gagaaacttagaggaccgaaataaatcaatttttaattagaggaccaa 10992255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 36713961 - 36714011
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    ||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  36713961 aataaatcaatttttagtttgaggaccaattcaataccaattaaatagtta 36714011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 23992218 - 23992267
Alignment:
Q  32 aataaatcaatttttagttagaggaccaatccgataccaattaaatagtt 81  Q
    |||||||||| |||||||||| ||||||| ||||||| ||||||||||||    
T  23992218 aataaatcaaattttagttaggggaccaaaccgatactaattaaatagtt 23992267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 15044803 - 15044763
Alignment:
Q  42 tttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||| ||||||||  ||||||||||||||||||||    
T  15044803 tttttagttaaaggaccaaagcgataccaattaaatagtta 15044763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 24510 - 24615
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| |  |||| ||| ||||||||    
T  24510 agtaacagtgagaaacttagaggaccaaaataaatcaatttttagttagaggaccaatccgataccaactaaatagttagagtaccaaaaatgtaattaa 24609  T
Q  104 gccaat 109  Q
    ||||||    
T  24610 gccaat 24615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 24255 - 24157
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaataa 111  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||| | ||||||| |||||||||| | ||||| |||||||||| |||| ||||    
T  24255 gagaaacttagaggatcgaaataaatcaatttttagttagaggaccaattcaataccaactaaatagttagaggaccaaaaaggtaatttagcctataa 24157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 14228 - 14135
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| | |||||||||||||    
T  14228 gagaaacttaaaggaccgaaataaatcaatttttagttagaggaccaatctgataccaattaaatagttagaggaccaaacaggtaattaagcc 14135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 14492 - 14585
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||| | ||||| |||||||||| ||||    
T  14492 gagaaacatagaggaccgaaataaatcaatttttagttagaggatcaatccgatatcaattaaatagttagaggaccaaaaaggtaatttagcc 14585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 18633 - 18725
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| ||| |||||||||||||    
T  18633 aaacttagaggaccaaaataaatcaatttttagttagaggaccaatccgataccaattaaataattaaaggaccaaaaatgtaattaagccaa 18725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 18375 - 18297
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||| | |||||||||||| ||||  |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  18375 agtagcggtgagaaacttagaagacctaaataaatcaatttttagttagaggaccaatctaataccaattaaatagtta 18297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 15805 - 15900
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaa 108  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||| | || || ||| |||||||||||||    
T  15805 gagaaacttagaggaccgaaataaatcaatttttagttagatgaccaatccgataccagttaaatagttagaggatcaaaaaagtaattaagccaa 15900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 15555 - 15477
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| ||| |||||||||| | ||||  |||||||||||||||| |||||||| |||||||||||||||| ||||||||    
T  15555 agtaacagtgagaaacttaaatgaccaaaataaatcaatttttaattagaggatcaatccgataccaattgaatagtta 15477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 81960 - 81858
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||| | || || |||| |||||||    
T  81960 agtaacagtgagaaacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaaataaatagttagaggatcaaaaagataattaa 81861  T
Q  104 gcc 106  Q
    |||    
T  81860 gcc 81858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 90795 - 90864
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  90795 gagaaacttagaggaccgaaataaatcaatttttagttagaggactaatccgataccaactaaatagtta 90864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 50569 - 50473
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagccaat 109  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| || | ||||| |||| |||||||| ||||    
T  50569 gagaaacttaaaggaccgaaataaatcaatttttagttagaggaccaatcagataccaattaaataggtagaggaccaaaaagataattaagtcaat 50473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 50833 - 50928
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaatt-aaatagttatatgaccagaaaggtaattaagcca 107  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||||| |||||||||| ||||||||| | ||||| ||| |||||| |||||    
T  50833 gagaaacttagaagaccgaaataaatcaatttttagttagaggatcaatctgataccaattaaaatagttagaggaccaaaaatgtaatttagcca 50928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 19800 - 19713
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatt 101  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||||||| | ||||| ||||||||||    
T  19800 agaaacttagaggaccgaaataaatcaatttttagttagaggactaatccaataccaactaaatagttagaggaccaaaaaggtaatt 19713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 20065 - 20155
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    ||||||||||||||||   ||  |||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| ||||||||    
T  20065 gagaaacttagaggacaaaaaataatcaatttttagttagaggaccaatccgataccaactaaatagttagaggaccaaaaatgtaattaa 20155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 8785 - 8874
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaatta 102  Q
    ||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| |||||||    
T  8785 gagaaacttagagaacataaataaatcaatttttagttagaggaccaatccgataccaattaaatagttagaggaccaaaaaagtaatta 8874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 8521 - 8429
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||| |||| || |||||||||||||||||||| || | ||||| ||||||||||||||||||| | ||||| |||||||||| ||||    
T  8521 gagaaacttaaaggatcgaaataaatcaatttttagttaaag-atcaatctgataccaattaaatagttagaggaccaaaaaggtaatttagcc 8429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 45849 - 45784
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaata 78  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  45849 gagaaacttagaggaccgaaataaatcaatttttagttagaggactaatccgataccaattaaata 45784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 56493 - 56562
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||  ||||||| ||||||||||    
T  56493 gagaaacttagaggaccgaaataaatcaatttttagttagatgaccaatcaaataccaactaaatagtta 56562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 63618 - 63687
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||  ||||||| ||||||||||    
T  63618 gagaaacttagaggaccgaaataaatcaatttttagttagatgaccaatcaaataccaactaaatagtta 63687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 349433 - 349522
Alignment:
Q  17 aacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||   ||||| |||||||| ||||||    
T  349433 aacttagaggaccgaaataaatcaatttttagttagaggaccaatctgataccaactaaatagttaggggaccaaaaaggtaactaagcc 349522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 113483 - 113417
Alignment:
Q  16 aaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  113483 aaacttagaggaccgaaataaatcaatttttagttagaggaccaatcggataccaattaaacagtta 113417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 113714 - 113817
Alignment:
Q  4 agtagcagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaa 103  Q
    |||| ||| |||||| ||||| ||||| || ||||||||||||||||| |||||||||| |||| || ||||||||||| | ||||| ||| ||||||||    
T  113714 agtaacagtgagaaatttagatgaccgaaagaaatcaatttttagttacaggaccaatctgatagcacttaaatagttagaggaccaaaaatgtaattaa 113813  T
Q  104 gcca 107  Q
    ||||    
T  113814 gcca 113817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 349166 - 349097
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    ||||||||||||||| || |||||||||||||||||||||||||| ||||  |||| |||||||||||||    
T  349166 gagaaacttagaggatcgaaataaatcaatttttagttagaggactaatctaatactaattaaatagtta 349097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 6352 - 6420
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| ||||||    
T  6352 gagaaacttagaggaccgaaataa-tcaatttttagttagaggaccaatacgataccaattaattagtta 6420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 6091 - 6044
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaa 60  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  6091 gagaaacttagaagaccgaaataaatcaatttttagttagaggaccaa 6044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 9874 - 9782
Alignment:
Q  14 agaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagttatatgaccagaaaggtaattaagcc 106  Q
    ||||||||| ||||||  |||||||||| |||||||||||||| ||| |||||||||||||||||||||   ||||| ||||| |||||||||    
T  9874 agaaacttaaaggaccaaaataaatcaaattttagttagaggagcaaaccgataccaattaaatagttaagggaccaaaaaggcaattaagcc 9782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 10909 - 10982
Alignment:
Q  9 cagagagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||| |||||||||  |||||  |||||||||| |||||||||| ||||||| ||||||| |||||||||||||    
T  10909 cagaaagaaacttaagggaccaaaataaatcaaattttagttaggggaccaaaccgatactaattaaatagtta 10982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 14284 - 14231
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaatccgata 67  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  14284 gagaaacttagaggaccgaaataaatcaatttttagttaga-gaccaatccgata 14231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 144101 - 144044
Alignment:
Q  25 ggaccggaataaatcaatttttagttagaggaccaatccgataccaattaaatagtta 82  Q
    |||||| ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  144101 ggaccgaaataaatcaatttttagttagagaaccaatatgataccaattaaatagtta 144044  T

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Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 147197 - 147245
Alignment:
Q  13 gagaaacttagaggaccggaataaatcaatttttagttagaggaccaat 61  Q
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T  147197 gagaaacttaacggaccgaaataaatcaatttttagttcgaggaccaat 147245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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