View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9618_low_6 (Length: 278)
Name: NF9618_low_6
Description: NF9618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9618_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 39255267 - 39255226
Alignment:
| Q |
15 |
tgggtagagaaggaatttgggtttaagaaggtcgaagtgata |
56 |
Q |
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| T |
39255267 |
tgggtagagaaggaatttgggtttaagaaggtcgaagtgata |
39255226 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 44752140 - 44752181
Alignment:
| Q |
15 |
tgggtagagaaggaatttgggtttaagaaggtcgaagtgata |
56 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
44752140 |
tgggtagagaaggaatttgggtttaagaaggtcgaagtgata |
44752181 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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