View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9620_high_6 (Length: 419)

Name: NF9620_high_6
Description: NF9620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9620_high_6
NF9620_high_6
[»] chr1 (3 HSPs)
chr1 (14-419)||(10420019-10420424)
chr1 (21-118)||(10409736-10409833)
chr1 (284-377)||(10415175-10415268)
[»] chr5 (12 HSPs)
chr5 (14-419)||(35367200-35367598)
chr5 (21-115)||(35755161-35755255)
chr5 (234-419)||(35755392-35755577)
chr5 (184-419)||(35425911-35426146)
chr5 (284-377)||(35371099-35371192)
chr5 (256-372)||(35386583-35386699)
chr5 (22-100)||(35376760-35376838)
chr5 (21-95)||(35411020-35411094)
chr5 (22-100)||(35424019-35424097)
chr5 (294-419)||(35377062-35377187)
chr5 (256-372)||(35411229-35411345)
chr5 (21-95)||(35386359-35386433)
[»] chr7 (2 HSPs)
chr7 (275-415)||(29622691-29622831)
chr7 (19-101)||(29622892-29622973)
[»] chr3 (2 HSPs)
chr3 (284-363)||(1154273-1154352)
chr3 (51-95)||(1154061-1154105)
[»] chr2 (3 HSPs)
chr2 (22-97)||(30626419-30626493)
chr2 (22-97)||(30663370-30663444)
chr2 (22-97)||(30672050-30672124)
[»] chr8 (4 HSPs)
chr8 (315-419)||(15294360-15294464)
chr8 (315-419)||(15474729-15474833)
chr8 (60-114)||(15294135-15294191)
chr8 (60-114)||(15474504-15474560)


Alignment Details
Target: chr1 (Bit Score: 366; Significance: 0; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 14 - 419
Target Start/End: Complemental strand, 10420424 - 10420019
Alignment:
Q  14 cagagaccattcaagtaaagatcaagttaatttttgcacaatcaagggaactataggatatgttcctcctggtaaagttctttctatcacttatttgtta 113  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10420424 cagagaccattcaagtaaagatcaagttaattcttccacaatcaagggaagtataggatatgttcctcctggtaaagttctttctatcacttatttgtta 10420325  T
Q  114 ctgtcgtttagactttagaatgtcttgccgatctttaacaaaattttagtaattttctcattttaataataatgatttgcttataatcagtatgcatcag 213  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||    
T  10420324 ctgtcgtttagactttagaatgtcttgcctatctttaacaaaattttagtaattttctcattctaataataatgatttgcttataaacagtatgcgtcag 10420225  T
Q  214 tatttgatatatactccaacccttaattattttgctaatgaattgttgttatttgaatagaatatggagtaggtgttccagtatctccccagggagatgt 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10420224 tatttgatatatactccaacccttaattattttgctaatgaattgttgttatttgaatagaatatggagcaggtgttccagtatctccccagggagatgt 10420125  T
Q  314 ttacagctttgggattctcttgttagagatgctcaccggaaagagaccaatagataacatgtttagccagaatcttagccttcacaaattctgtaagatg 413  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10420124 ttacagctttgggattctcttgttagagatgctcactggaaagagaccaacagataacatgtttagccagaatcttagccttcacaaattctgtaagatg 10420025  T
Q  414 aaaatt 419  Q
    ||||||    
T  10420024 aaaatt 10420019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 10409833 - 10409736
Alignment:
Q  21 cattcaagtaaagatcaagttaatttttgcacaatcaagggaactataggatatgttcctcctggtaaagttctttctatcacttatttgttactgtc 118  Q
    |||||||||||||||||||||| ||  |  ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||| || |||||    
T  10409833 cattcaagtaaagatcaagttatttcctctacaattaagggaactataggatatgttcctcccggtaaagttctttttatcacttatttatttctgtc 10409736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 284 - 377
Target Start/End: Complemental strand, 10415268 - 10415175
Alignment:
Q  284 aggtgttccagtatctccccagggagatgtttacagctttgggattctcttgttagagatgctcaccggaaagagaccaatagataacatgttt 377  Q
    ||||||||||||||| || ||||||||| | || ||||||||||||||  |||||||||||||||| ||||||||||||| | |||||||||||    
T  10415268 aggtgttccagtatcaccacagggagatatctatagctttgggattcttctgttagagatgctcactggaaagagaccaacaaataacatgttt 10415175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 300; Significance: 1e-168; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 14 - 419
Target Start/End: Original strand, 35367200 - 35367598
Alignment:
Q  14 cagagaccattcaagtaaagatcaagttaatttttgcacaatcaagggaactataggatatgttcctcctggtaaagttctttctatcacttatttgtta 113  Q
    |||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35367200 cagagaccattcaagtaaagatcaagttaattcttccacaattaagggaactataggatatgttcctcctggtaaagttctttctatcacttatttgtta 35367299  T
Q  114 ctgtcgtttagactttagaatgtcttgccgatctttaacaaaattttagtaattttctcattttaataataatgatttgcttataatcagtatgcatcag 213  Q
    ||||| ||||       |||||||||||| |||||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  35367300 ctgtcattta-------gaatgtcttgccaatctttaacaaaattttagtaattttctcattctaataaatttgatttgcttataatcagtatgcatcag 35367392  T
Q  214 tatttgatatatactccaacccttaattattttgctaatgaattgttgttatttgaatagaatatggagtaggtgttccagtatctccccagggagatgt 313  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  35367393 tatttgatatatactccaaccgttaattattttgctaaagaattgttgttatttgaatagaatatggagcaggtgttccagtatctccacagggagatgt 35367492  T
Q  314 ttacagctttgggattctcttgttagagatgctcaccggaaagagaccaatagataacatgtttagccagaatcttagccttcacaaattctgtaagatg 413  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||| ||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  35367493 ttacagctttgggattctactgttagagatgctcactggaaagagaccaacagatagcatgttttgcgagaatcttagccttcacaaattctgtaagatg 35367592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 35755161 - 35755255
Alignment:
Q  21 cattcaagtaaagatcaagttaatttttgcacaatcaagggaactataggatatgttcctcctggtaaagttctttctatcacttatttgttact 115  Q
    |||||||||||||||||||||||||  |  ||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  35755161 cattcaagtaaagatcaagttaattcctctacaattaagggaactataggatatgttcctcctggtaaagttcttttcatcacttatttgttact 35755255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 234 - 419
Target Start/End: Original strand, 35755392 - 35755577
Alignment:
Q  234 ccttaattattttgctaatgaattgttgttatttgaatagaatatggagtaggtgttccagtatctccccagggagatgtttacagctttgggattctct 333  Q
    |||||||| ||||  ||| ||||||||||| |||||| ||| ||||||| ||||| ||| ||||| ||  |||||||| ||||||||| |||||||||      
T  35755392 ccttaatttttttcttaaagaattgttgttgtttgaaaagagtatggagcaggtggtccggtatcaccggagggagatatttacagctatgggattctgc 35755491  T
Q  334 tgttagagatgctcaccggaaagagaccaatagataacatgtttagccagaatcttagccttcacaaattctgtaagatgaaaatt 419  Q
    |||| || ||||| |||||||||||||||| |||||||||||||    ||||||| |  || ||||||||||||||||||| ||||    
T  35755492 tgttggaaatgcttaccggaaagagaccaacagataacatgttttatgagaatctaactctacacaaattctgtaagatgagaatt 35755577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 419
Target Start/End: Original strand, 35425911 - 35426146
Alignment:
Q  184 aatgatttgcttataatcagtatgcatcagtatttgatatatactccaacccttaattattttgctaatgaattgttgttatttgaatagaatatggagt 283  Q
    |||||||| ||| |||||| ||||||| ||||||||||| ||||||||  ||||||||  | | |||| ||||||||||| ||| |||||| ||||||      
T  35425911 aatgattttcttttaatcaatatgcataagtatttgataaatactccattccttaatttctattctaaagaattgttgttgttttaatagagtatggatc 35426010  T
Q  284 aggtgttccagtatctccccagggagatgtttacagctttgggattctcttgttagagatgctcaccggaaagagaccaatagataacatgtttagccag 383  Q
    ||||| |   ||||| || ||||||||| | || |||| ||| ||| |  ||||||||||||| || ||||||||||||| |||||||||||||    ||    
T  35426011 aggtggtatggtatcaccacagggagatatctatagctatggaattgttctgttagagatgcttactggaaagagaccaacagataacatgttttatgag 35426110  T
Q  384 aatcttagccttcacaaattctgtaagatgaaaatt 419  Q
    ||| | ||  | ||||||||||||||||||| ||||    
T  35426111 aatttaagtttacacaaattctgtaagatgagaatt 35426146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 284 - 377
Target Start/End: Original strand, 35371099 - 35371192
Alignment:
Q  284 aggtgttccagtatctccccagggagatgtttacagctttgggattctcttgttagagatgctcaccggaaagagaccaatagataacatgttt 377  Q
    ||||||||||||||| || || |||||| | || ||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||    
T  35371099 aggtgttccagtatcaccacatggagatatctatagctttgggattcttctgttagagatgctcaccggaaagagaccaacagataacatgttt 35371192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 256 - 372
Target Start/End: Original strand, 35386583 - 35386699
Alignment:
Q  256 ttgttgttatttgaatagaatatggagtaggtgttccagtatctccccagggagatgtttacagctttgggattctcttgttagagatgctcaccggaaa 355  Q
    |||||||| |||||| ||| || |||| ||||||||||||||| ||  |||||||| | |||||||||||||||||  |  |||||||| ||||||||||    
T  35386583 ttgttgttgtttgaaaagagtacggagaaggtgttccagtatcaccaaagggagatatctacagctttgggattcttctactagagatgttcaccggaaa 35386682  T
Q  356 gagaccaatagataaca 372  Q
    |||||||| | ||||||    
T  35386683 gagaccaacaaataaca 35386699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 35376760 - 35376838
Alignment:
Q  22 attcaagtaaagatcaagttaatttttgcacaatcaagggaactataggatatgttcctcctggtaaagttctttctat 100  Q
    ||||||||||| ||||||||| ||  | |||||| || ||||||||||||||| |||||||||||||||||||||||||    
T  35376760 attcaagtaaaaatcaagttatttcctccacaattaaaggaactataggatatattcctcctggtaaagttctttctat 35376838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 35411020 - 35411094
Alignment:
Q  21 cattcaagtaaagatcaagttaatttttgcacaatcaagggaactataggatatgttcctcctggtaaagttctt 95  Q
    |||||||||||||||||||||| |||||  ||||| || ||||||||||||||| ||||||||||||||| ||||    
T  35411020 cattcaagtaaagatcaagttattttttctacaattaaaggaactataggatatattcctcctggtaaagctctt 35411094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 35424019 - 35424097
Alignment:
Q  22 attcaagtaaagatcaagttaatttttgcacaatcaagggaactataggatatgttcctcctggtaaagttctttctat 100  Q
    ||||||||||| ||||||||| ||  | |||||| || ||||||||||||||| |||||||||||||||||||||||||    
T  35424019 attcaagtaaaaatcaagttatttcctccacaattaaaggaactataggatatattcctcctggtaaagttctttctat 35424097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 419
Target Start/End: Original strand, 35377062 - 35377187
Alignment:
Q  294 gtatctccccagggagatgtttacagctttgggattctcttgttagagatgctcaccggaaagagaccaatagataacatgtttagccagaatcttagcc 393  Q
    ||||| || ||||||||| | || |||| ||| |||||  ||||||||||||| || ||||||||||||| ||||||||| ||| |  ||||||| |||     
T  35377062 gtatcaccacagggagatatctatagctatggaattcttctgttagagatgcttactggaaagagaccaacagataacatcttttgtgagaatctaagct 35377161  T
Q  394 ttcacaaattctgtaagatgaaaatt 419  Q
    | |||||||| |||||||||||||||    
T  35377162 tacacaaattttgtaagatgaaaatt 35377187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 372
Target Start/End: Original strand, 35411229 - 35411345
Alignment:
Q  256 ttgttgttatttgaatagaatatggagtaggtgttccagtatctccccagggagatgtttacagctttgggattctcttgttagagatgctcaccggaaa 355  Q
    |||||||| |||||| ||| || |||| ||||||||||||||| || | ||||||| | |||||||||||||||||  |  |||||||| |||| | |||    
T  35411229 ttgttgttgtttgaaaagagtacggagaaggtgttccagtatcaccacggggagatatctacagctttgggattcttctactagagatgttcactgcaaa 35411328  T
Q  356 gagaccaatagataaca 372  Q
    |||||||| | ||||||    
T  35411329 gagaccaacaaataaca 35411345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 35386359 - 35386433
Alignment:
Q  21 cattcaagtaaagatcaagttaatttttgcacaatcaagggaactataggatatgttcctcctggtaaagttctt 95  Q
    |||||||||||||||||||||| ||  |  || || || ||||||||||||||| ||||||||||||||||||||    
T  35386359 cattcaagtaaagatcaagttatttcctctactattaaaggaactataggatatattcctcctggtaaagttctt 35386433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 275 - 415
Target Start/End: Complemental strand, 29622831 - 29622691
Alignment:
Q  275 atatggagtaggtgttccagtatctccccagggagatgtttacagctttgggattctcttgttagagatgctcaccggaaagagaccaatagataacatg 374  Q
    |||||||  ||||||||||||||| || ||||||||| | ||||||||||| |||||  |||||||||||||||| ||||||||||||  ||||||||||    
T  29622831 atatggaacaggtgttccagtatcaccacagggagatatctacagctttggcattcttctgttagagatgctcactggaaagagaccagcagataacatg 29622732  T
Q  375 tttagccagaatcttagccttcacaaattctgtaagatgaa 415  Q
    ||| |  ||||| | ||||| ||||||||||||||||||||    
T  29622731 ttttgtgagaatttaagcctacacaaattctgtaagatgaa 29622691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 29622973 - 29622892
Alignment:
Q  19 accattcaagtaaagatcaagttaatttttgcacaatcaagggaactataggatatgttcctcctggtaaagttctttctatc 101  Q
    ||||||||||||| |||||| ||| || || |||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  29622973 accattcaagtaatgatcaaattacttcttccacaattaagggaactataggatatgttcctcctggt-aagttctttctatc 29622892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 284 - 363
Target Start/End: Original strand, 1154273 - 1154352
Alignment:
Q  284 aggtgttccagtatctccccagggagatgtttacagctttgggattctcttgttagagatgctcaccggaaagagaccaa 363  Q
    ||||||||||||||| || ||||||||| | |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  1154273 aggtgttccagtatcaccacagggagatatctacagctttgggattcttctgttagagatgctcaccggaaagagaccaa 1154352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 95
Target Start/End: Original strand, 1154061 - 1154105
Alignment:
Q  51 acaatcaagggaactataggatatgttcctcctggtaaagttctt 95  Q
    ||||| || ||||| ||||||||| ||||||||||||||||||||    
T  1154061 acaattaaaggaacaataggatatattcctcctggtaaagttctt 1154105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 30626419 - 30626493
Alignment:
Q  22 attcaagtaaagatcaagttaatttttgcacaatcaagggaactataggatatgttcctcctggtaaagttctttc 97  Q
    ||||||||  ||||||||||||||  | |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  30626419 attcaagtgtagatcaagttaattcgtccacaattaagggaactataggatatgttcctcctggt-aagttctttc 30626493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 30663370 - 30663444
Alignment:
Q  22 attcaagtaaagatcaagttaatttttgcacaatcaagggaactataggatatgttcctcctggtaaagttctttc 97  Q
    ||||||||  ||||||||||||||  | |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  30663370 attcaagtgtagatcaagttaattcgtccacaattaagggaactataggatatgttcctcctggt-aagttctttc 30663444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 30672050 - 30672124
Alignment:
Q  22 attcaagtaaagatcaagttaatttttgcacaatcaagggaactataggatatgttcctcctggtaaagttctttc 97  Q
    ||||||||  ||||||||||||||  | |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  30672050 attcaagtgtagatcaagttaattcgtccacaattaagggaactataggatatgttcctcctggt-aagttctttc 30672124  T

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Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 419
Target Start/End: Original strand, 15294360 - 15294464
Alignment:
Q  315 tacagctttgggattctcttgttagagatgctcaccggaaagagaccaatagataacatgtttagccagaatcttagccttcacaaattctgtaagatga 414  Q
    ||||||| |||||||||  |||| || |||||||||||||||||||||| | ||| ||||||  |  ||||||| || || || ||||| ||||||||||    
T  15294360 tacagctatgggattctgctgttggaaatgctcaccggaaagagaccaacaaatagcatgttctgtgagaatctaagtctacagaaattttgtaagatga 15294459  T
Q  415 aaatt 419  Q
    |||||    
T  15294460 aaatt 15294464  T

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Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 419
Target Start/End: Original strand, 15474729 - 15474833
Alignment:
Q  315 tacagctttgggattctcttgttagagatgctcaccggaaagagaccaatagataacatgtttagccagaatcttagccttcacaaattctgtaagatga 414  Q
    ||||||| |||||||||  |||| || |||||||||||||||||||||| | ||| ||||||  |  ||||||| || || || ||||| ||||||||||    
T  15474729 tacagctatgggattctgctgttggaaatgctcaccggaaagagaccaacaaatagcatgttctgtgagaatctaagtctacagaaattttgtaagatga 15474828  T
Q  415 aaatt 419  Q
    |||||    
T  15474829 aaatt 15474833  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 15294135 - 15294191
Alignment:
Q  60 ggaactataggatatgttcctcctggtaaagttcttt--ctatcacttatttgttac 114  Q
    ||||||||||||||| |||||||||||||||||||||   | |||||||||||||||    
T  15294135 ggaactataggatatattcctcctggtaaagttcttttcatgtcacttatttgttac 15294191  T

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Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 15474504 - 15474560
Alignment:
Q  60 ggaactataggatatgttcctcctggtaaagttcttt--ctatcacttatttgttac 114  Q
    ||||||||||||||| |||||||||||||||||||||   | |||||||||||||||    
T  15474504 ggaactataggatatattcctcctggtaaagttcttttcatgtcacttatttgttac 15474560  T

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