View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9621_low_34 (Length: 279)
Name: NF9621_low_34
Description: NF9621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9621_low_34 |
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Alignment Details
Target: chr6 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 7276244 - 7275968
Alignment:
| Q |
1 |
tctataaatcactattgtaagacttaaacctaatcttgtctacgtaggcacattaaatatgcgacatttcgttagtgcatgtatttaggaaatatgcata |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7276244 |
tctataaatcactattgtaagacttaaacctaatcttgtctacgtaggcacattaaatatgcgacatttcgttagtgcatgtatttaggaaatatgcata |
7276145 |
T |
|
| Q |
101 |
aggatgagatagataaatagtaataaaattgagagggaaatagaatattcaaatgtgtttaccacactataaaatcttgagaatagcattacatagtgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7276144 |
aggatgagatagataaatagtaataaaattgagagggaaatagaatattcaaatgtgtttaccacactataaaatcttgagaatagcattacatagtgat |
7276045 |
T |
|
| Q |
201 |
gtgtcaccaacctatgacagagtggtccatactaaaatttactcataaaaggtgcattgtgtatttgactatctgtg |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |
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| T |
7276044 |
gtgtcaccaacctatgacagagtggtccatactaaaatttactcataaagggtgcattgtgtatttgactatttgtg |
7275968 |
T |
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