View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9622_high_2 (Length: 648)

Name: NF9622_high_2
Description: NF9622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9622_high_2
NF9622_high_2
[»] chr4 (5 HSPs)
chr4 (1-445)||(25109381-25109823)
chr4 (526-632)||(25109198-25109303)
chr4 (345-419)||(24156568-24156642)
chr4 (337-421)||(19149844-19149928)
chr4 (210-265)||(24306401-24306456)
[»] chr6 (9 HSPs)
chr6 (172-422)||(28493627-28493877)
chr6 (172-422)||(29806036-29806286)
chr6 (117-427)||(16498196-16498506)
chr6 (117-263)||(31932142-31932288)
chr6 (2-104)||(35164299-35164401)
chr6 (159-322)||(6180221-6180384)
chr6 (345-420)||(31930700-31930775)
chr6 (297-379)||(7469845-7469927)
chr6 (366-427)||(9756867-9756928)
[»] chr2 (5 HSPs)
chr2 (117-427)||(35296964-35297274)
chr2 (117-427)||(14688491-14688801)
chr2 (366-427)||(7026851-7026912)
chr2 (336-419)||(44024264-44024347)
chr2 (114-265)||(44024042-44024193)
[»] chr5 (5 HSPs)
chr5 (1-111)||(39045199-39045309)
chr5 (147-373)||(5122762-5122988)
chr5 (3-111)||(7280100-7280208)
chr5 (366-427)||(31112082-31112143)
chr5 (1-51)||(41701215-41701265)
[»] chr1 (3 HSPs)
chr1 (117-421)||(45516395-45516699)
chr1 (117-427)||(44093782-44094092)
chr1 (292-378)||(42767690-42767776)
[»] scaffold0015 (1 HSPs)
scaffold0015 (117-427)||(13900-14210)
[»] chr3 (4 HSPs)
chr3 (117-427)||(49147676-49147986)
chr3 (214-422)||(43367634-43367840)
chr3 (1-111)||(3423250-3423360)
chr3 (249-322)||(47158821-47158894)
[»] chr8 (6 HSPs)
chr8 (119-427)||(29259107-29259415)
chr8 (117-238)||(13821265-13821386)
chr8 (147-321)||(13075227-13075401)
chr8 (156-322)||(26706713-26706879)
chr8 (159-316)||(40736660-40736817)
chr8 (342-421)||(13821480-13821557)
[»] chr7 (2 HSPs)
chr7 (366-427)||(42128586-42128647)
chr7 (117-187)||(16768109-16768179)


Alignment Details
Target: chr4 (Bit Score: 341; Significance: 0; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 1 - 445
Target Start/End: Complemental strand, 25109823 - 25109381
Alignment:
Q  1 aaatagactgtcagttgctagtattgatgctcatatttatccatctcatagaatctgtccacacagcatcaacaaattcagaagtaaaaaataaatgaga 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  |||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  25109823 aaatagactgtcagttgctagtattgatgctcatattcatccatctcgcagaacctgtccacacagcatcagcaaattcagaagtaaaaaataaatgaga 25109724  T
Q  101 atgactttcatagcactatcaaggtttaaagttggcgattagcttcaattgtgaggaattggcttgctacacagattcccttcttgctgtcaaccttatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  25109723 atgactttcatagcactatcaaggtttaaagttggcgattagcttcaattgtgtggaaattgcttgctacacagattcccttcttgctgtcaaccttatc 25109624  T
Q  201 aaagaagatttaaatcagtttcatgtctatattgttcttatccaaaatatcaaagaccacatgagttctcgaaatttcttccttcaccgttcgctcagag 300  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  25109623 aaagaagattt-aatcagtttcatgtctatactgttcttatccaaaatatcaaaga-cacatgagttctcgaaatttcttccttcaccattcgctcagag 25109526  T
Q  301 aaggcaatcagtgtgcggattttagaatcaaatttagagtctcgaatgatgtcgagttgtctattcactcttctcctccagaggacctgctgcctctgct 400  Q
    ||||||||||||||||||||||||| | |||| |||||| |||||||||||||||||||||||||||||||||| || |||||||||| |||||||| ||    
T  25109525 aaggcaatcagtgtgcggattttaggaccaaacttagagcctcgaatgatgtcgagttgtctattcactcttcttcttcagaggacctactgcctctact 25109426  T
Q  401 caagatggatgaattaggagttctcttcctgagagcctaacctcg 445  Q
    ||||| |||||||||||||||| | |||||||| |||||||||||    
T  25109425 caagacggatgaattaggagtttttttcctgagggcctaacctcg 25109381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 526 - 632
Target Start/End: Complemental strand, 25109303 - 25109198
Alignment:
Q  526 tcacgaagtgaaaaattgccactttctctgacgcaattttactgaagattatattaaataaataaaacatacatcacctttataatacaaacacaaaact 625  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25109303 tcacgaagt-aaaaattgccactttctctgacgcaattttactgaagattatattaaataaataaaacatacatcacctttataatacaaacaaaaaact 25109205  T
Q  626 caattat 632  Q
    |||||||    
T  25109204 caattat 25109198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 345 - 419
Target Start/End: Complemental strand, 24156642 - 24156568
Alignment:
Q  345 aatgatgtcgagttgtctattcactcttctcctccagaggacctgctgcctctgctcaagatggatgaattagga 419  Q
    |||||||| |||||||| || ||||||||||| || |||||||||||||||||| | |||| |||||||||||||    
T  24156642 aatgatgttgagttgtccatccactcttctccgccggaggacctgctgcctctgttaaagacggatgaattagga 24156568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 337 - 421
Target Start/End: Complemental strand, 19149928 - 19149844
Alignment:
Q  337 gagtctcgaatgatgtcgagttgtctattcactcttctcctccagaggacctgctgcctctgctcaagatggatgaattaggagt 421  Q
    |||| |||||||||||  || |||| ||||||||||||||||| ||||||||| |||||||||| | ||  ||||||||||||||    
T  19149928 gagtttcgaatgatgttaagctgtccattcactcttctcctccggaggacctgttgcctctgctaaggacagatgaattaggagt 19149844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 24306456 - 24306401
Alignment:
Q  210 ttaaatcagtttcatgtctatattgttcttatccaaaatatcaaagaccacatgag 265  Q
    |||||||| |||||||| ||| |||| ||||| |||||||||||||||| ||||||    
T  24306456 ttaaatcactttcatgtttatgttgtgcttatacaaaatatcaaagacctcatgag 24306401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 6e-51; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 172 - 422
Target Start/End: Original strand, 28493627 - 28493877
Alignment:
Q  172 cagattcccttcttgctgtcaaccttatcaaagaagatttaaatcagtttcatgtctatattgttcttatccaaaatatcaaagaccacatgagttctcg 271  Q
    ||||||| ||||||| ||||||||| |||||||| ||||||||||| ||||||||||||  ||||||||||||||| |||||||||  ||||||| || |    
T  28493627 cagattctcttcttgttgtcaacctcatcaaagatgatttaaatcattttcatgtctattctgttcttatccaaaacatcaaagacatcatgagtactag 28493726  T
Q  272 aaatttcttccttcaccgttcgctcagagaaggcaatcagtgtgcggattttagaatcaaatttagagtctcgaatgatgtcgagttgtctattcactct 371  Q
    |||||||| |||||  | ||| ||||||||||||||||||||||| || |||     |||  || |||  |||||||||| |||||||||||| ||||||    
T  28493727 aaatttctcccttcggcattcactcagagaaggcaatcagtgtgccgactttctggccaagcttcgagcttcgaatgatgacgagttgtctatccactct 28493826  T
Q  372 tctcctccagaggacctgctgcctctgctcaagatggatgaattaggagtt 422  Q
    || ||||||||| |||||||||||||||| | |||||||||  ||||||||    
T  28493827 tcacctccagagaacctgctgcctctgcttaggatggatgagctaggagtt 28493877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 172 - 422
Target Start/End: Original strand, 29806036 - 29806286
Alignment:
Q  172 cagattcccttcttgctgtcaaccttatcaaagaagatttaaatcagtttcatgtctatattgttcttatccaaaatatcaaagaccacatgagttctcg 271  Q
    ||||||| ||||||| ||||||||| |||||||| ||||||||||| ||||||||||||  ||||||||||||||| |||||||||  ||||||| || |    
T  29806036 cagattctcttcttgttgtcaacctcatcaaagatgatttaaatcattttcatgtctattctgttcttatccaaaacatcaaagacatcatgagtactag 29806135  T
Q  272 aaatttcttccttcaccgttcgctcagagaaggcaatcagtgtgcggattttagaatcaaatttagagtctcgaatgatgtcgagttgtctattcactct 371  Q
    |||||||| |||||  | ||| ||||||||||||||||||||||| || |||     |||  || |||  |||||||||| |||||||||||| ||||||    
T  29806136 aaatttctcccttcggcattcactcagagaaggcaatcagtgtgccgactttctggccaagcttcgagcttcgaatgatgacgagttgtctatccactct 29806235  T
Q  372 tctcctccagaggacctgctgcctctgctcaagatggatgaattaggagtt 422  Q
    || ||||||||| |||||||||||||||| | |||||||||  ||||||||    
T  29806236 tcacctccagagaacctgctgcctctgcttaggatggatgagctaggagtt 29806286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 117 - 427
Target Start/End: Complemental strand, 16498506 - 16498196
Alignment:
Q  117 tatcaaggtttaaagttggcgattagcttcaattgtgaggaattggcttgctacacagattcccttcttgctgtcaaccttatcaaagaagatttaaatc 216  Q
    |||||||| |||| ||||||| ||| ||| ||||||||||||||||| |||||  |||| |||||||||||  | ||||| |||||||| ||||||||||    
T  16498506 tatcaagggttaaggttggcggttaacttaaattgtgaggaattggcgtgctattcagactcccttcttgcaatgaacctcatcaaagatgatttaaatc 16498407  T
Q  217 agtttcatgtctatattgttcttatccaaaatatcaaagaccacatgagttctcgaaatttcttccttcaccgttcgctcagagaaggcaatcagtgtgc 316  Q
    | ||||||||  ||  | |||| || |||||||||||||||  ||||  |||||| ||||||  |||||| |  || |||||||| || ||||||| |||    
T  16498406 attttcatgttcatgctattctcattcaaaatatcaaagacatcatggtttctcgtaatttcaaccttcatcactcactcagagagggaaatcagtatgc 16498307  T
Q  317 ggattttagaatcaaatttagagtctcgaatgatgtcgagttgtctattcactcttctcctccagaggacctgctgcctctgctcaagatggatgaatta 416  Q
     || ||||     ||| || |||  ||||  ||||| || ||| || | ||||||||||||||||||||||||||||||| ||| | ||  |||||||||    
T  16498306 agactttatggctaaacttggagcatcgagcgatgttgaattgactctccactcttctcctccagaggacctgctgcctccgcttaggacagatgaatta 16498207  T
Q  417 ggagttctctt 427  Q
    ||||| |||||    
T  16498206 ggagtcctctt 16498196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 117 - 263
Target Start/End: Complemental strand, 31932288 - 31932142
Alignment:
Q  117 tatcaaggtttaaagttggcgattagcttcaattgtgaggaattggcttgctacacagattcccttcttgctgtcaaccttatcaaagaagatttaaatc 216  Q
    |||||| || ||||| |||| ||||| ||||||| ||| ||||||| ||||||  | |||||||||||  ||||||| || ||||| || ||||| ||||    
T  31932288 tatcaaagtctaaagctggctattagtttcaattttgacgaattggtttgctattcggattcccttctcactgtcaaactcatcaaggaggatttgaatc 31932189  T
Q  217 agtttcatgtctatattgttcttatccaaaatatcaaagaccacatg 263  Q
    | |||||||| ||| |||| ||||| |||||||||||||||| ||||    
T  31932188 actttcatgtttatgttgtgcttattcaaaatatcaaagacctcatg 31932142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 35164299 - 35164401
Alignment:
Q  2 aatagactgtcagttgctagtattgatgctcatatttatccatctcatagaatctgtccacacagcatcaacaaattcagaagtaaaaaataaatgagaa 101  Q
    ||||||||| || |||||| |||||| ||| ||||| |||||  | |||| | ||||||||||| |||||||| ||||| |||||||||||| |||||||    
T  35164299 aatagactgccaattgctaatattgacgcttatattcatccaatttatagcacctgtccacacaacatcaacatattcacaagtaaaaaatagatgagaa 35164398  T
Q  102 tga 104  Q
    |||    
T  35164399 tga 35164401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 322
Target Start/End: Original strand, 6180221 - 6180384
Alignment:
Q  159 ttggcttgctacacagattcccttcttgctgtcaaccttatcaaagaagatttaaatcagtttcatgtctatattgttcttatccaaaatatcaaagacc 258  Q
    |||||||||||| | || || |||||| | || ||||| ||||| || | ||| || || | ||||||||||  ||| || || || || ||||||||||    
T  6180221 ttggcttgctactcggactctcttcttacggttaacctcatcaaggatggtttgaaccattgtcatgtctatgctgtgctcattcagaacatcaaagacc 6180320  T
Q  259 acatgagttctcgaaatttcttccttcaccgttcgctcagagaaggcaatcagtgtgcggattt 322  Q
     ||| ||| | ||||||||||  ||||||| |||||| |||||||||||||| ||||| |||||    
T  6180321 tcatcagtgcgcgaaatttctctcttcaccattcgctaagagaaggcaatcaatgtgcagattt 6180384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 345 - 420
Target Start/End: Complemental strand, 31930775 - 31930700
Alignment:
Q  345 aatgatgtcgagttgtctattcactcttctcctccagaggacctgctgcctctgctcaagatggatgaattaggag 420  Q
    |||||||| |||| ||| ||||||||||| ||||| ||||||||||| |||||| | | || ||||||||||||||    
T  31930775 aatgatgttgagtcgtccattcactcttcccctccggaggacctgctacctctgataaggacggatgaattaggag 31930700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 297 - 379
Target Start/End: Complemental strand, 7469927 - 7469845
Alignment:
Q  297 agagaaggcaatcagtgtgcggattttagaatcaaatttagagtctcgaatgatgtcgagttgtctattcactcttctcctcc 379  Q
    ||||| |||||||| ||||||||||| |   ||||| |||||  ||||| ||||||||| ||| | |||||||||||||||||    
T  7469927 agagagggcaatcaatgtgcggatttcatggtcaaacttagaacctcgactgatgtcgacttgacaattcactcttctcctcc 7469845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 9756928 - 9756867
Alignment:
Q  366 cactcttctcctccagaggacctgctgcctctgctcaagatggatgaattaggagttctctt 427  Q
    |||||||||||| || ||||| |||||||||| || | || ||||||||||||||| |||||    
T  9756928 cactcttctccttcataggacatgctgcctcttcttaggacggatgaattaggagtcctctt 9756867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 4e-46; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 117 - 427
Target Start/End: Original strand, 35296964 - 35297274
Alignment:
Q  117 tatcaaggtttaaagttggcgattagcttcaattgtgaggaattggcttgctacacagattcccttcttgctgtcaaccttatcaaagaagatttaaatc 216  Q
    |||||||| |||| ||||||| | | ||| ||||||||||||||||| |||||  |||| ||||||||||| |||||||| ||||| || ||||||||||    
T  35296964 tatcaagggttaaggttggcggtcaacttaaattgtgaggaattggcgtgctattcagactcccttcttgcagtcaacctgatcaatgatgatttaaatc 35297063  T
Q  217 agtttcatgtctatattgttcttatccaaaatatcaaagaccacatgagttctcgaaatttcttccttcaccgttcgctcagagaaggcaatcagtgtgc 316  Q
    | ||||||||||||  |||||| || |||||||||||||||  ||||  |||||| ||||||  |||||| |  || |||||||| || |||||||||||    
T  35297064 attttcatgtctatgctgttctcattcaaaatatcaaagacatcatggtttctcgtaatttcaaccttcatcactcactcagagagggaaatcagtgtgc 35297163  T
Q  317 ggattttagaatcaaatttagagtctcgaatgatgtcgagttgtctattcactcttctcctccagaggacctgctgcctctgctcaagatggatgaatta 416  Q
     || ||||     ||| || |||  ||||  ||||| || ||| || | |||||||||||| |||||||||||||||||||||| | || ||||||||||    
T  35297164 agactttatggctaaacttggagcatcgagcgatgttgaattgactctccactcttctccttcagaggacctgctgcctctgcttaggacggatgaatta 35297263  T
Q  417 ggagttctctt 427  Q
    |||||||||||    
T  35297264 ggagttctctt 35297274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 117 - 427
Target Start/End: Original strand, 14688491 - 14688801
Alignment:
Q  117 tatcaaggtttaaagttggcgattagcttcaattgtgaggaattggcttgctacacagattcccttcttgctgtcaaccttatcaaagaagatttaaatc 216  Q
    |||||| | |||| ||||||| | | ||| ||||||||||||||||| |||||  |||| |||||||||||  ||||||| |||||||| ||||||||||    
T  14688491 tatcaaaggttaaggttggcggtcaacttaaattgtgaggaattggcgtgctattcagactcccttcttgcaatcaacctcatcaaagatgatttaaatc 14688590  T
Q  217 agtttcatgtctatattgttcttatccaaaatatcaaagaccacatgagttctcgaaatttcttccttcaccgttcgctcagagaaggcaatcagtgtgc 316  Q
    | |||||||| ||| ||||||| || ||||| |||||||||  ||||  |||||| ||||||  |||||| |  || |||||||| || ||||| |||||    
T  14688591 attttcatgtttatgttgttctcattcaaaacatcaaagacatcatggtttctcgtaatttcaaccttcatcactcactcagagagggaaatcaatgtgc 14688690  T
Q  317 ggattttagaatcaaatttagagtctcgaatgatgtcgagttgtctattcactcttctcctccagaggacctgctgcctctgctcaagatggatgaatta 416  Q
      | ||||     ||| || |||  ||||  ||||| || ||| || | ||||||||||||| ||||||||||||||||||| | | || ||||||||||    
T  14688691 aaactttatggctaaacttggagcatcgagcgatgttgaattgactctccactcttctcctctagaggacctgctgcctctggttaggacggatgaatta 14688790  T
Q  417 ggagttctctt 427  Q
    ||||| |||||    
T  14688791 ggagtcctctt 14688801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 7026912 - 7026851
Alignment:
Q  366 cactcttctcctccagaggacctgctgcctctgctcaagatggatgaattaggagttctctt 427  Q
    ||||||||||||||||||||||||||||||||||| | || ||||||||||||||| |||||    
T  7026912 cactcttctcctccagaggacctgctgcctctgcttaggacggatgaattaggagtcctctt 7026851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 419
Target Start/End: Original strand, 44024264 - 44024347
Alignment:
Q  336 agagtctcgaatgatgtcgagttgtctattcactcttctcctccagaggacctgctgcctctgctcaagatggatgaattagga 419  Q
    ||||| || |||||||| ||| |||| || ||||||||||| || |||||||||||||||||| | |||| |||||||||||||    
T  44024264 agagtttctaatgatgttgagctgtccatccactcttctccaccggaggacctgctgcctctgttaaagacggatgaattagga 44024347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 114 - 265
Target Start/End: Original strand, 44024042 - 44024193
Alignment:
Q  114 cactatcaaggtttaaagttggcgattagcttcaattgtgaggaattggcttgctacacagattcccttcttgctgtcaaccttatcaaagaagatttaa 213  Q
    |||||||||||| |||||||||| || || ||||||  ||  ||  || |||||||| | |||||| ||||  |||||||||| || |  || ||  |||    
T  44024042 cactatcaaggtctaaagttggctatgagtttcaatcttggcgaggtgacttgctactcggattccattctcactgtcaacctcattacggaggagctaa 44024141  T
Q  214 atcagtttcatgtctatattgttcttatccaaaatatcaaagaccacatgag 265  Q
    |||| |||||||| ||| |||| ||||| |||||||||||||||| ||||||    
T  44024142 atcactttcatgtttatgttgtgcttatacaaaatatcaaagacctcatgag 44024193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 9e-44; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 39045199 - 39045309
Alignment:
Q  1 aaatagactgtcagttgctagtattgatgctcatatttatccatctcatagaatctgtccacacagcatcaacaaattcagaagtaaaaaataaatgaga 100  Q
    ||||||||| |||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  39045199 aaatagactctcagctgctagtattgatgctcatattcatccatctcatagaacctgtccacacagcatcaacaaattcacaagtaaaaaataaatgaga 39045298  T
Q  101 atgactttcat 111  Q
    |||||||||||    
T  39045299 atgactttcat 39045309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 147 - 373
Target Start/End: Original strand, 5122762 - 5122988
Alignment:
Q  147 aattgtgaggaattggcttgctacacagattcccttcttgctgtcaaccttatcaaagaagatttaaatcagtttcatgtctatattgttcttatccaaa 246  Q
    |||| |||| |||| ||||||||  ||||||| || ||  | ||||| || ||||| || ||||| ||||| | |||||| ||| ||||||| ||| | |    
T  5122762 aattttgagaaattagcttgctattcagattctctcctcaccgtcaatctcatcaaggatgatttcaatcattatcatgtttatgttgttctcatctaga 5122861  T
Q  247 atatcaaagaccacatgagttctcgaaatttcttccttcaccgttcgctcagagaaggcaatcagtgtgcggattttagaatcaaatttagagtctcgaa 346  Q
    | |||||||||| |||||||||  ||||||||   ||||| | ||| ||||||||||||||||||||||| ||||  |     ||  |||||||||||||    
T  5122862 acatcaaagacctcatgagttcaagaaatttcactcttcagcattcactcagagaaggcaatcagtgtgcagattacatggctaagcttagagtctcgaa 5122961  T
Q  347 tgatgtcgagttgtctattcactcttc 373  Q
    ||||||||| |||  ||||||||||||    
T  5122962 tgatgtcgatttggttattcactcttc 5122988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 7280208 - 7280100
Alignment:
Q  3 atagactgtcagttgctagtattgatgctcatatttatccatctcatagaatctgtccacacagcatcaacaaattcagaagtaaaaaataaatgagaat 102  Q
    ||||| || ||||||||||||||||  |||||||||||||||||||||| | || |||||||| ||||| || ||||| ||| |||||| |  |||||||    
T  7280208 atagattgccagttgctagtattgacactcatatttatccatctcatagcacctttccacacaacatcagcatattcacaagaaaaaaacaggtgagaat 7280109  T
Q  103 gactttcat 111  Q
    || ||||||    
T  7280108 gagtttcat 7280100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 31112143 - 31112082
Alignment:
Q  366 cactcttctcctccagaggacctgctgcctctgctcaagatggatgaattaggagttctctt 427  Q
    |||| |||||||||||||||||||||||| ||||| | || ||||||||||||||| |||||    
T  31112143 cactattctcctccagaggacctgctgccgctgcttaggacggatgaattaggagtcctctt 31112082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 41701215 - 41701265
Alignment:
Q  1 aaatagactgtcagttgctagtattgatgctcatatttatccatctcatag 51  Q
    ||||||| |||||||||||||||||||||||||  || |||||||||||||    
T  41701215 aaatagattgtcagttgctagtattgatgctcaagttcatccatctcatag 41701265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 8e-38; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 117 - 421
Target Start/End: Complemental strand, 45516699 - 45516395
Alignment:
Q  117 tatcaaggtttaaagttggcgattagcttcaattgtgaggaattggcttgctacacagattcccttcttgctgtcaaccttatcaaagaagatttaaatc 216  Q
    |||||||| |||| ||||||||| ||||||||||||||||||||||| |||||  |||||||||||||||| |||||| | |||||||| ||||||||||    
T  45516699 tatcaagggttaaggttggcgatcagcttcaattgtgaggaattggcgtgctattcagattcccttcttgcagtcaacttcatcaaagatgatttaaatc 45516600  T
Q  217 agtttcatgtctatattgttcttatccaaaatatcaaagaccacatgagttctcgaaatttcttccttcaccgttcgctcagagaaggcaatcagtgtgc 316  Q
    | |||||||| |||  |||||| || ||||| |||||||||  ||||  |||||| |||||   | |||| |  || |||||||| || ||||||  |||    
T  45516599 attttcatgtttattatgttctcatacaaaacatcaaagacatcatggtttctcgtaatttaaacattcatcactcactcagagagggaaatcagcatgc 45516500  T
Q  317 ggattttagaatcaaatttagagtctcgaatgatgtcgagttgtctattcactcttctcctccagaggacctgctgcctctgctcaagatggatgaatta 416  Q
    | | ||||     |||  | |||  ||||||||||| || ||| || | ||||||||||||| ||||||||| ||||||||||| | || ||||||||||    
T  45516499 gaactttatggctaaacatggagcatcgaatgatgttgaattgactctccactcttctcctcgagaggacctactgcctctgcttaggacggatgaatta 45516400  T
Q  417 ggagt 421  Q
    |||||    
T  45516399 ggagt 45516395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 117 - 427
Target Start/End: Original strand, 44093782 - 44094092
Alignment:
Q  117 tatcaaggtttaaagttggcgattagcttcaattgtgaggaattggcttgctacacagattcccttcttgctgtcaaccttatcaaagaagatttaaatc 216  Q
    |||||||| |||| ||||||| | ||||| |||||| |||||||||| |||||  |||| || |||||||| |||||||| |||||||| ||||||||||    
T  44093782 tatcaagggttaaggttggcggtcagcttaaattgttaggaattggcgtgctattcagactcacttcttgcagtcaacctcatcaaagatgatttaaatc 44093881  T
Q  217 agtttcatgtctatattgttcttatccaaaatatcaaagaccacatgagttctcgaaatttcttccttcaccgttcgctcagagaaggcaatcagtgtgc 316  Q
    | |||||||| ||| ||||||| || ||||| |||||||||  ||||  |||||| ||||||  |||||| |  ||  ||||||| || |||||||||||    
T  44093882 attttcatgtttatgttgttctcattcaaaacatcaaagacatcatggtttctcgtaatttcaaccttcatcactcattcagagagggaaatcagtgtgc 44093981  T
Q  317 ggattttagaatcaaatttagagtctcgaatgatgtcgagttgtctattcactcttctcctccagaggacctgctgcctctgctcaagatggatgaatta 416  Q
      | ||||     ||| || |||  ||||  ||| | || ||| || | ||||||||||||||||||||||||||||||||||| | || |||||| |||    
T  44093982 aaactttatggctaaacttggagcatcgagcgatattgaattgactttccactcttctcctccagaggacctgctgcctctgcttaggacggatgattta 44094081  T
Q  417 ggagttctctt 427  Q
    ||||| |||||    
T  44094082 ggagtcctctt 44094092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 292 - 378
Target Start/End: Original strand, 42767690 - 42767776
Alignment:
Q  292 cgctcagagaaggcaatcagtgtgcggattttagaatcaaatttagagtctcgaatgatgtcgagttgtctattcactcttctcctc 378  Q
    |||| ||||| |||||||| |||||||||||||    ||||||||||| ||||| ||||||||| ||| | ||||||||||||||||    
T  42767690 cgcttagagagggcaatcaatgtgcggattttatggccaaatttagagcctcgactgatgtcgacttgacaattcactcttctcctc 42767776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 117 - 427
Target Start/End: Original strand, 13900 - 14210
Alignment:
Q  117 tatcaaggtttaaagttggcgattagcttcaattgtgaggaattggcttgctacacagattcccttcttgctgtcaaccttatcaaagaagatttaaatc 216  Q
    |||||||| |||| ||||||| | | ||| ||||||||||||||||| |||||  |||| ||||||||||| |||||||| |||||||| |||||||||     
T  13900 tatcaagggttaaggttggcggtcaacttaaattgtgaggaattggcgtgctattcagactcccttcttgcagtcaacctcatcaaagatgatttaaatt 13999  T
Q  217 agtttcatgtctatattgttcttatccaaaatatcaaagaccacatgagttctcgaaatttcttccttcaccgttcgctcagagaaggcaatcagtgtgc 316  Q
    | |||||||| |||  |||||| || |||||||||||||||  ||||  |||||| ||||||  |||||| |  || |||||||| || |||||||||||    
T  14000 attttcatgtttatgctgttctcattcaaaatatcaaagacatcatggtttctcgtaatttcaaccttcatcactcactcagagagggaaatcagtgtgc 14099  T
Q  317 ggattttagaatcaaatttagagtctcgaatgatgtcgagttgtctattcactcttctcctccagaggacctgctgcctctgctcaagatggatgaatta 416  Q
     || ||||     ||| || |||  ||||  ||||| || ||| || | ||||||||||||||| ||||| ||| ||||||||| | || ||||||||||    
T  14100 agactttatggctaaacttggagcatcgagcgatgttgaattgactctccactcttctcctccaaaggacatgcagcctctgcttaggacggatgaatta 14199  T
Q  417 ggagttctctt 427  Q
    ||||| |||||    
T  14200 ggagtcctctt 14210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 117 - 427
Target Start/End: Complemental strand, 49147986 - 49147676
Alignment:
Q  117 tatcaaggtttaaagttggcgattagcttcaattgtgaggaattggcttgctacacagattcccttcttgctgtcaaccttatcaaagaagatttaaatc 216  Q
    |||||||| |||| ||||||||| ||||| |||||||||| |||||| |||||  |||| ||||||||||| |||||||| |||||||| ||||||||||    
T  49147986 tatcaagggttaaggttggcgatcagcttaaattgtgaggtattggcgtgctattcagactcccttcttgcagtcaacctcatcaaagatgatttaaatc 49147887  T
Q  217 agtttcatgtctatattgttcttatccaaaatatcaaagaccacatgagttctcgaaatttcttccttcaccgttcgctcagagaaggcaatcagtgtgc 316  Q
    | || ||||| ||| ||||||| || ||||| || ||||||  ||||  |||||| ||||||  | |||| |  || || ||||| || |||||||||||    
T  49147886 atttccatgtttatgttgttctcattcaaaacattaaagacatcatggtttctcgtaatttcaacattcatcactcacttagagagggaaatcagtgtgc 49147787  T
Q  317 ggattttagaatcaaatttagagtctcgaatgatgtcgagttgtctattcactcttctcctccagaggacctgctgcctctgctcaagatggatgaatta 416  Q
     || ||||     ||| || |||  ||||  ||||| || ||| || | || |||||||||||||||||||||||||||||||| | || ||||||||||    
T  49147786 agactttatggctaaaattggagcatcgagcgatgttgaattgactctccaatcttctcctccagaggacctgctgcctctgcttaggacggatgaatta 49147687  T
Q  417 ggagttctctt 427  Q
    ||||| |||||    
T  49147686 ggagtcctctt 49147676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 214 - 422
Target Start/End: Original strand, 43367634 - 43367840
Alignment:
Q  214 atcagtttcatgtctatattgttcttatccaaaatatcaaagaccacatgagttctcgaaatttcttccttcaccgttcgctcagagaaggcaatcagtg 313  Q
    |||| |||||||||||| | |||  |||| |||| |||||||||  ||||||| || ||||||||| |||||| | |||||||||||||||||||||| |    
T  43367634 atcattttcatgtctatgtcgtt--tatctaaaacatcaaagacatcatgagtactagaaatttctcccttcagcattcgctcagagaaggcaatcagcg 43367731  T
Q  314 tgcggattttagaatcaaatttagagtctcgaatgatgtcgagttgtctattcactcttctcctccagaggacctgctgcctctgctcaagatggatgaa 413  Q
    |||||| |||  || |||  |  |||| |||||||||| ||||||||| || |||||||| |||||| |||||||||| |||||||| | || |||||||    
T  43367732 tgcggactttgtaaccaagctaggagtttcgaatgatgacgagttgtcaatccactcttcacctccaaaggacctgctacctctgcttaggacggatgaa 43367831  T
Q  414 ttaggagtt 422  Q
     ||||||||    
T  43367832 ctaggagtt 43367840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 3423250 - 3423360
Alignment:
Q  1 aaatagactgtcagttgctagtattgatgctcatatttatccatctcatagaatctgtccacacagcatcaacaaattcagaagtaaaaaataaatgaga 100  Q
    ||||||| || || |||||||||||||   ||||||| ||||||||||||  | || |||| |||||||||||| | ||| ||| |||||| |  |||||    
T  3423250 aaatagaatgccaattgctagtattgaccgtcatattcatccatctcataacacctttccaaacagcatcaacataatcacaagaaaaaaagaggtgaga 3423349  T
Q  101 atgactttcat 111  Q
    |||| ||||||    
T  3423350 atgagtttcat 3423360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 47158894 - 47158821
Alignment:
Q  249 atcaaagaccacatgagttctcgaaatttcttccttcaccgttcgctcagagaaggcaatcagtgtgcggattt 322  Q
    |||||||||| ||| ||| |  |||||||||  ||||||| |||||| |||||||||||||| ||||| |||||    
T  47158894 atcaaagacctcatcagtgcgtgaaatttctctcttcaccattcgctaagagaaggcaatcaatgtgcagattt 47158821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 5e-33; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 119 - 427
Target Start/End: Original strand, 29259107 - 29259415
Alignment:
Q  119 tcaaggtttaaagttggcgattagcttcaattgtgaggaattggcttgctacacagattcccttcttgctgtcaaccttatcaaagaagatttaaatcag 218  Q
    |||||| |||| ||||||| | | ||| ||||||||||||||||| |||||  |||| ||||||||||| |||||||| |||||||| |||||||||||     
T  29259107 tcaagggttaaggttggcggtcaacttaaattgtgaggaattggcgtgctattcagactcccttcttgcagtcaacctcatcaaagatgatttaaatcat 29259206  T
Q  219 tttcatgtctatattgttcttatccaaaatatcaaagaccacatgagttctcgaaatttcttccttcaccgttcgctcagagaaggcaatcagtgtgcgg 318  Q
    |||||||| |||  |||||| || |||||||||||||||  ||||  |||||| ||||||  |||||| |  || |||||||| || ||| ||||||  |    
T  29259207 tttcatgtttatgctgttctcattcaaaatatcaaagacatcatggtttctcgtaatttcaaccttcatcactcactcagagagggaaattagtgtgtag 29259306  T
Q  319 attttagaatcaaatttagagtctcgaatgatgtcgagttgtctattcactcttctcctccagaggacctgctgcctctgctcaagatggatgaattagg 418  Q
    | ||||     ||| || |||  ||||  ||||| || ||| || | ||||||||||||||| ||||| ||| ||||||||| | || ||||||||||||    
T  29259307 actttatggctaaacttggagcatcgagcgatgttgaattgactctccactcttctcctccaaaggacatgccgcctctgcttaggacggatgaattagg 29259406  T
Q  419 agttctctt 427  Q
    ||| |||||    
T  29259407 agtcctctt 29259415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 117 - 238
Target Start/End: Original strand, 13821265 - 13821386
Alignment:
Q  117 tatcaaggtttaaagttggcgattagcttcaattgtgaggaattggcttgctacacagattcccttcttgctgtcaaccttatcaaagaagatttaaatc 216  Q
    |||||| | |||| ||||||||| | ||| ||||||||||||||| | |||||  |||| ||||||||||| |||||||| |||||||| ||||||||||    
T  13821265 tatcaatggttaaggttggcgatcaacttaaattgtgaggaattgacgtgctattcagactcccttcttgcagtcaacctcatcaaagatgatttaaatc 13821364  T
Q  217 agtttcatgtctatattgttct 238  Q
    | |||||||| ||| |||||||    
T  13821365 attttcatgtttatgttgttct 13821386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 147 - 321
Target Start/End: Complemental strand, 13075401 - 13075227
Alignment:
Q  147 aattgtgaggaattggcttgctacacagattcccttcttgctgtcaaccttatcaaagaagatttaaatcagtttcatgtctatattgttcttatccaaa 246  Q
    |||| ||||||||| ||||||||  || |||| || ||  | ||||| ||||| || || ||||||||||| |||||||| ||| ||||||| ||| |      
T  13075401 aattttgaggaattagcttgctattcaaattctctcctcaccgtcaatcttataaaggatgatttaaatcattttcatgtttatgttgttctcatctagg 13075302  T
Q  247 atatcaaagaccacatgagttctcgaaatttcttccttcaccgttcgctcagagaaggcaatcagtgtgcggatt 321  Q
    | |||||||||| || ||||||| ||||||||    |||| | ||||||||||||||||||||||||||| ||||    
T  13075301 acatcaaagacctcacgagttctagaaatttcactgttcaacattcgctcagagaaggcaatcagtgtgcagatt 13075227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 322
Target Start/End: Complemental strand, 26706879 - 26706713
Alignment:
Q  156 gaattggcttgctacacagattcccttcttgctgtcaaccttatcaaagaagatttaaatcagtttcatgtctatattgttcttatccaaaatatcaaag 255  Q
    |||||||| |||||| ||||||| |||||| ||||||| || ||||   | || |||||||| | |||||||||| |||| || || || || ||||| |    
T  26706879 gaattggcatgctactcagattctcttcttactgtcaatctcatcatgcatgaattaaatcattatcatgtctatgttgtgctaattcagaacatcaagg 26706780  T
Q  256 accacatgagttctcgaaatttcttccttcaccgttcgctcagagaaggcaatcagtgtgcggattt 322  Q
    ||| ||| | |||| |||||| ||  ||||| | ||| ||||||||||| ||||||||||| |||||    
T  26706779 acctcatcacttctagaaattactctcttcatcattcactcagagaaggtaatcagtgtgcagattt 26706713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 159 - 316
Target Start/End: Complemental strand, 40736817 - 40736660
Alignment:
Q  159 ttggcttgctacacagattcccttcttgctgtcaaccttatcaaagaagatttaaatcagtttcatgtctatattgttcttatccaaaatatcaaagacc 258  Q
    ||||||||||||  |||||| |||||| | || || || ||||| || | ||| ||||| | ||||||||||  ||| || ||  | || ||||||||||    
T  40736817 ttggcttgctacttagattctcttcttacggttaatctcatcaaggatggtttgaatcattatcatgtctatgctgtgctcatttagaacatcaaagacc 40736718  T
Q  259 acatgagttctcgaaatttcttccttcaccgttcgctcagagaaggcaatcagtgtgc 316  Q
     |||  || | ||||||||||  ||||||| |||||| ||||||||||||||||||||    
T  40736717 tcatcggtgcgcgaaatttctctcttcaccattcgctaagagaaggcaatcagtgtgc 40736660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 342 - 421
Target Start/End: Original strand, 13821480 - 13821557
Alignment:
Q  342 tcgaatgatgtcgagttgtctattcactcttctcctccagaggacctgctgcctctgctcaagatggatgaattaggagt 421  Q
    ||||||||||| || ||| || | |||||||||||   ||||||||||||||||||||| | || | |||||||||||||    
T  13821480 tcgaatgatgttgaattgactctccactcttctccg--agaggacctgctgcctctgcttaggacgaatgaattaggagt 13821557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 42128586 - 42128647
Alignment:
Q  366 cactcttctcctccagaggacctgctgcctctgctcaagatggatgaattaggagttctctt 427  Q
    |||||||||| |||||||||||||||||||||||| | ||  |||||||||||||| |||||    
T  42128586 cactcttctcttccagaggacctgctgcctctgcttaggacagatgaattaggagtcctctt 42128647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 16768179 - 16768109
Alignment:
Q  117 tatcaaggtttaaagttggcgattagcttcaattgtgaggaattggcttgctacacagattcccttcttgc 187  Q
    |||||||| |||| ||||||| | | ||| ||||||||||||||||| |||||  |||| |||||||||||    
T  16768179 tatcaagggttaaggttggcggtcaacttaaattgtgaggaattggcgtgctattcagactcccttcttgc 16768109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University