View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9622_low_9 (Length: 401)
Name: NF9622_low_9
Description: NF9622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9622_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 14 - 382
Target Start/End: Original strand, 43852655 - 43853027
Alignment:
| Q |
14 |
attattctcattgaaataaagtgaaaacaacttgaaataagatcatatatattcttaatctcttcttgnnnnnnnnnn----aaaaaagaacaaggaaga |
109 |
Q |
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| T |
43852655 |
attattctcattgaaataaagtgaaaacaacttgaaataagatcatatatattcttaatctcttttttttttttttattttaaaaaaagaacatggaaga |
43852754 |
T |
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| Q |
110 |
tgaaagtttttattagtcgaagtgacactaattaatgacaattatataacctccttccagggatttaaatttcgtctcttgagattatattgtgacacta |
209 |
Q |
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| T |
43852755 |
tgaaagtttttattagtcgaagtgacactaattaatgacaattatataacctccctccagggatttaaatttcgtctcttgagattatattgtgacacta |
43852854 |
T |
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| Q |
210 |
ttacctcccaaatgaattgaatgacgaatcgttcaggagaatctaagtttgattcctggatgaacatttcttagtcaaaacttacttatctcctgaccaa |
309 |
Q |
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| T |
43852855 |
ttacctcccaaatgaattgaatgacgaatcgttcaggagaatctaagtttgattcctggatgaacattttttagtcaaaacttacttatcttctgaccaa |
43852954 |
T |
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| Q |
310 |
actttggattatcaggacctctttcccattaggaccgaagggttaacacaaaaaataattgtgaaactattac |
382 |
Q |
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| T |
43852955 |
actttggattatcaggacctctttcccattaggaccgaagggttaacacaaaaaataattgtgaaactattac |
43853027 |
T |
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