View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9623_high_2 (Length: 611)

Name: NF9623_high_2
Description: NF9623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9623_high_2
NF9623_high_2
[»] chr3 (51 HSPs)
chr3 (353-597)||(48705313-48705554)
chr3 (345-601)||(48715295-48715551)
chr3 (18-208)||(36750050-36750240)
chr3 (18-216)||(52492132-52492330)
chr3 (65-214)||(36750337-36750486)
chr3 (57-212)||(38922744-38922900)
chr3 (65-215)||(32490094-32490245)
chr3 (65-214)||(41755498-41755648)
chr3 (65-213)||(19132711-19132860)
chr3 (65-213)||(38923564-38923713)
chr3 (65-212)||(45242067-45242215)
chr3 (65-214)||(41756331-41756481)
chr3 (65-214)||(44687062-44687212)
chr3 (65-211)||(3970994-3971141)
chr3 (95-213)||(19132563-19132681)
chr3 (65-214)||(44686254-44686403)
chr3 (65-213)||(45242886-45243035)
chr3 (65-211)||(3998740-3998887)
chr3 (65-214)||(3971801-3971951)
chr3 (65-214)||(3997927-3998077)
chr3 (65-213)||(52491891-52492035)
chr3 (95-213)||(32489946-32490064)
chr3 (65-189)||(45500497-45500620)
chr3 (230-283)||(48715120-48715173)
chr3 (74-186)||(8436574-8436685)
chr3 (74-189)||(8440119-8440233)
chr3 (166-213)||(31556217-31556264)
chr3 (164-215)||(37105076-37105127)
chr3 (164-214)||(14667296-14667345)
chr3 (65-154)||(8653622-8653709)
chr3 (164-213)||(49757181-49757230)
chr3 (164-212)||(42145277-42145325)
chr3 (82-153)||(8427276-8427346)
chr3 (167-213)||(17226968-17227014)
chr3 (164-214)||(49756274-49756324)
chr3 (65-130)||(11267588-11267651)
chr3 (166-213)||(21811879-21811926)
chr3 (82-153)||(25025234-25025304)
chr3 (166-213)||(31556188-31556235)
chr3 (164-211)||(32994927-32994974)
chr3 (164-215)||(46719659-46719710)
chr3 (82-153)||(47737629-47737699)
chr3 (164-202)||(37104363-37104401)
chr3 (179-213)||(38923438-38923472)
chr3 (179-213)||(45242307-45242341)
chr3 (172-213)||(17227955-17227996)
chr3 (165-214)||(43638078-43638127)
chr3 (165-214)||(49749124-49749173)
chr3 (65-110)||(50305167-50305212)
chr3 (166-206)||(38337478-38337518)
chr3 (165-213)||(39901846-39901894)
[»] chr7 (43 HSPs)
chr7 (18-213)||(38072144-38072339)
chr7 (18-211)||(7677663-7677855)
chr7 (18-209)||(4261209-4261400)
chr7 (65-213)||(17145622-17145772)
chr7 (65-214)||(38071897-38072047)
chr7 (65-213)||(668179-668328)
chr7 (65-214)||(37864206-37864356)
chr7 (65-213)||(669002-669151)
chr7 (65-214)||(4261495-4261645)
chr7 (96-214)||(38778853-38778971)
chr7 (99-213)||(38779498-38779611)
chr7 (65-209)||(7677421-7677566)
chr7 (65-214)||(41194512-41194659)
chr7 (95-213)||(17145802-17145920)
chr7 (132-213)||(37468972-37469053)
chr7 (65-189)||(32859257-32859380)
chr7 (156-214)||(37468909-37468967)
chr7 (113-213)||(24322299-24322399)
chr7 (115-215)||(44909309-44909409)
chr7 (164-214)||(29006346-29006396)
chr7 (165-206)||(20890206-20890247)
chr7 (95-199)||(42607095-42607198)
chr7 (166-214)||(45887981-45888029)
chr7 (166-214)||(47331954-47332002)
chr7 (164-214)||(29007198-29007248)
chr7 (164-214)||(41224842-41224892)
chr7 (122-199)||(40257759-40257836)
chr7 (166-214)||(4985395-4985443)
chr7 (166-214)||(4989493-4989541)
chr7 (121-213)||(27599211-27599303)
chr7 (164-216)||(29314578-29314630)
chr7 (166-206)||(45887286-45887326)
chr7 (82-153)||(27855625-27855695)
chr7 (111-214)||(29315257-29315360)
chr7 (73-128)||(41195275-41195329)
chr7 (166-213)||(41533896-41533943)
chr7 (111-213)||(27600041-27600143)
chr7 (179-212)||(668420-668453)
chr7 (164-213)||(44896046-44896095)
chr7 (167-208)||(48259820-48259861)
chr7 (166-214)||(24321424-24321472)
chr7 (166-206)||(24322429-24322469)
chr7 (95-199)||(40257594-40257697)
[»] chr8 (35 HSPs)
chr8 (18-213)||(5035130-5035324)
chr8 (65-215)||(34992163-34992314)
chr8 (67-214)||(41859309-41859457)
chr8 (65-206)||(37639718-37639860)
chr8 (65-213)||(32536708-32536857)
chr8 (95-214)||(5034897-5035016)
chr8 (65-213)||(38023624-38023773)
chr8 (95-213)||(34992015-34992133)
chr8 (65-214)||(41859995-41860145)
chr8 (65-214)||(32537387-32537534)
chr8 (65-127)||(38024430-38024492)
chr8 (165-214)||(25876520-25876569)
chr8 (141-205)||(37640538-37640601)
chr8 (165-214)||(61453-61502)
chr8 (164-213)||(27918046-27918095)
chr8 (165-213)||(1365829-1365877)
chr8 (176-214)||(44098432-44098470)
chr8 (73-130)||(10501822-10501877)
chr8 (164-213)||(41092172-41092221)
chr8 (165-213)||(39254787-39254835)
chr8 (82-153)||(7818534-7818604)
chr8 (82-153)||(10806008-10806078)
chr8 (82-153)||(39852759-39852829)
chr8 (164-211)||(41348146-41348193)
chr8 (166-213)||(43924490-43924537)
chr8 (112-214)||(30272903-30273005)
chr8 (83-153)||(38778752-38778821)
chr8 (165-206)||(4364046-4364087)
chr8 (165-214)||(7424562-7424611)
chr8 (112-213)||(36936644-36936745)
chr8 (165-214)||(39255752-39255801)
chr8 (165-214)||(44751607-44751656)
chr8 (165-213)||(62240-62288)
chr8 (165-213)||(36936418-36936466)
chr8 (165-213)||(42345166-42345214)
[»] scaffold0041 (2 HSPs)
scaffold0041 (18-213)||(27221-27415)
scaffold0041 (136-213)||(27546-27623)
[»] chr5 (34 HSPs)
chr5 (57-214)||(33001931-33002087)
chr5 (65-214)||(33002715-33002865)
chr5 (65-213)||(686417-686565)
chr5 (65-213)||(15183916-15184065)
chr5 (67-214)||(8204119-8204267)
chr5 (65-214)||(8040194-8040344)
chr5 (65-213)||(15183088-15183238)
chr5 (85-214)||(12190078-12190207)
chr5 (95-214)||(36626560-36626679)
chr5 (65-212)||(687247-687395)
chr5 (95-214)||(8040374-8040493)
chr5 (113-214)||(33283971-33284072)
chr5 (166-213)||(39950404-39950451)
chr5 (113-209)||(33283169-33283265)
chr5 (166-213)||(2319266-2319313)
chr5 (164-207)||(4607470-4607513)
chr5 (111-213)||(16970979-16971081)
chr5 (164-213)||(4608589-4608638)
chr5 (165-214)||(13654932-13654981)
chr5 (166-214)||(2319968-2320016)
chr5 (166-214)||(26268343-26268391)
chr5 (134-186)||(33685772-33685824)
chr5 (177-213)||(39950444-39950480)
chr5 (163-214)||(13404701-13404752)
chr5 (166-213)||(26269022-26269069)
chr5 (179-213)||(686667-686701)
chr5 (164-214)||(2458353-2458403)
chr5 (18-52)||(33002584-33002618)
chr5 (165-214)||(8226641-8226690)
chr5 (164-213)||(31148444-31148493)
chr5 (167-208)||(39167442-39167483)
chr5 (74-154)||(42518811-42518891)
chr5 (165-213)||(26688166-26688214)
chr5 (165-213)||(26957897-26957945)
[»] chr4 (70 HSPs)
chr4 (57-213)||(39523164-39523319)
chr4 (65-214)||(11417686-11417836)
chr4 (65-214)||(26611182-26611332)
chr4 (65-214)||(10424958-10425108)
chr4 (65-214)||(21166274-21166424)
chr4 (65-214)||(29651231-29651381)
chr4 (65-213)||(10424123-10424272)
chr4 (57-209)||(38143628-38143781)
chr4 (65-213)||(45230365-45230514)
chr4 (65-213)||(36865616-36865765)
chr4 (95-213)||(11417867-11417985)
chr4 (65-208)||(26610350-26610495)
chr4 (65-213)||(38694850-38695002)
chr4 (65-213)||(45235859-45236008)
chr4 (95-215)||(31836390-31836510)
chr4 (65-212)||(29650416-29650564)
chr4 (95-213)||(38694702-38694820)
chr4 (65-213)||(21165447-21165596)
chr4 (95-214)||(9939301-9939420)
chr4 (65-214)||(39522374-39522524)
chr4 (65-213)||(31835148-31835297)
chr4 (95-212)||(36864818-36864935)
chr4 (67-214)||(9939124-9939269)
chr4 (95-195)||(38143506-38143606)
chr4 (65-199)||(25970120-25970250)
chr4 (65-199)||(36451327-36451461)
chr4 (57-175)||(11806129-11806244)
chr4 (65-196)||(23383327-23383457)
chr4 (65-186)||(17648044-17648165)
chr4 (71-199)||(36450742-36450871)
chr4 (64-214)||(25970701-25970852)
chr4 (164-215)||(47377597-47377648)
chr4 (121-213)||(30808621-30808713)
chr4 (165-208)||(3847891-3847934)
chr4 (165-215)||(47198603-47198653)
chr4 (165-214)||(42544487-42544536)
chr4 (160-213)||(47376852-47376905)
chr4 (113-213)||(38014870-38014970)
chr4 (165-208)||(3848578-3848621)
chr4 (164-206)||(11680283-11680325)
chr4 (164-206)||(11688562-11688604)
chr4 (166-208)||(25370511-25370553)
chr4 (164-214)||(28684231-28684281)
chr4 (164-213)||(37275088-37275137)
chr4 (166-215)||(46765169-46765218)
chr4 (165-214)||(52757812-52757861)
chr4 (84-154)||(5825393-5825459)
chr4 (165-213)||(25371545-25371593)
chr4 (112-214)||(12589286-12589388)
chr4 (165-216)||(55159177-55159228)
chr4 (179-213)||(10424385-10424419)
chr4 (164-206)||(12590202-12590244)
chr4 (179-213)||(21166137-21166171)
chr4 (164-214)||(23425206-23425256)
chr4 (164-206)||(25655638-25655680)
chr4 (179-213)||(29650655-29650689)
chr4 (179-213)||(31836221-31836255)
chr4 (164-214)||(31910553-31910603)
chr4 (18-52)||(39522621-39522655)
chr4 (179-213)||(45235733-45235767)
chr4 (165-214)||(30478308-30478357)
chr4 (164-213)||(42545562-42545611)
chr4 (165-214)||(47199395-47199444)
chr4 (165-214)||(48013316-48013365)
chr4 (165-214)||(55160067-55160115)
chr4 (166-214)||(11681275-11681323)
chr4 (166-214)||(11689554-11689602)
chr4 (82-130)||(20822706-20822754)
chr4 (169-213)||(23865321-23865365)
chr4 (164-212)||(52758709-52758757)
[»] chr6 (29 HSPs)
chr6 (65-211)||(3542816-3542963)
chr6 (57-213)||(33480519-33480676)
chr6 (95-213)||(3542993-3543111)
chr6 (65-213)||(15083217-15083366)
chr6 (65-213)||(22579935-22580084)
chr6 (65-213)||(33018167-33018316)
chr6 (65-211)||(33479698-33479846)
chr6 (65-208)||(15082402-15082546)
chr6 (95-215)||(33018346-33018466)
chr6 (75-214)||(7193337-7193474)
chr6 (69-209)||(22587213-22587354)
chr6 (95-214)||(7193508-7193627)
chr6 (106-209)||(22582420-22582523)
chr6 (164-213)||(24125972-24126021)
chr6 (160-213)||(24126713-24126766)
chr6 (165-214)||(7159341-7159390)
chr6 (165-213)||(7531829-7531877)
chr6 (166-208)||(10607406-10607448)
chr6 (164-206)||(10608319-10608361)
chr6 (165-215)||(14337557-14337607)
chr6 (179-213)||(15082638-15082672)
chr6 (179-213)||(22580597-22580631)
chr6 (179-213)||(22587083-22587117)
chr6 (179-213)||(33479938-33479972)
chr6 (113-214)||(1035351-1035452)
chr6 (165-214)||(7532440-7532489)
chr6 (140-188)||(4311163-4311211)
chr6 (165-213)||(9574571-9574619)
chr6 (111-199)||(25067796-25067884)
[»] scaffold0311 (1 HSPs)
scaffold0311 (65-215)||(58-210)
[»] chr2 (26 HSPs)
chr2 (65-213)||(21471853-21472002)
chr2 (65-214)||(21471016-21471166)
chr2 (65-215)||(38834385-38834536)
chr2 (95-214)||(37547997-37548116)
chr2 (99-213)||(14573261-14573374)
chr2 (65-213)||(4479603-4479750)
chr2 (95-214)||(38834566-38834685)
chr2 (95-213)||(13134318-13134436)
chr2 (96-214)||(14573930-14574048)
chr2 (165-213)||(33433160-33433208)
chr2 (133-188)||(30486909-30486964)
chr2 (165-215)||(5276463-5276513)
chr2 (177-214)||(1164788-1164825)
chr2 (164-213)||(16426553-16426602)
chr2 (164-213)||(40992222-40992271)
chr2 (166-214)||(41984726-41984774)
chr2 (164-215)||(2650227-2650278)
chr2 (73-128)||(4478936-4478990)
chr2 (82-153)||(11256696-11256766)
chr2 (164-214)||(24727820-24727870)
chr2 (171-213)||(24741811-24741853)
chr2 (164-214)||(30545434-30545484)
chr2 (165-214)||(4478850-4478899)
chr2 (165-214)||(19521917-19521966)
chr2 (166-215)||(41043329-41043378)
chr2 (161-213)||(30544727-30544779)
[»] chr1 (54 HSPs)
chr1 (65-213)||(43737729-43737878)
chr1 (65-213)||(16270207-16270357)
chr1 (95-213)||(23440795-23440913)
chr1 (67-214)||(48972346-48972494)
chr1 (65-213)||(9947995-9948144)
chr1 (85-213)||(9948807-9948935)
chr1 (65-213)||(23440617-23440765)
chr1 (65-214)||(51974436-51974586)
chr1 (65-213)||(16271047-16271196)
chr1 (57-199)||(6075988-6076127)
chr1 (95-214)||(43737908-43738027)
chr1 (57-213)||(48971705-48971862)
chr1 (65-213)||(51975126-51975275)
chr1 (65-213)||(193850-193997)
chr1 (67-213)||(50826992-50827138)
chr1 (57-213)||(38930312-38930469)
chr1 (65-189)||(12925897-12926020)
chr1 (65-199)||(6076767-6076901)
chr1 (65-189)||(20794313-20794436)
chr1 (65-195)||(47334217-47334347)
chr1 (65-178)||(17050488-17050600)
chr1 (65-189)||(31390726-31390847)
chr1 (65-211)||(38931145-38931293)
chr1 (64-213)||(47334798-47334948)
chr1 (119-183)||(27888701-27888765)
chr1 (164-214)||(1012546-1012596)
chr1 (114-178)||(40649516-40649580)
chr1 (165-214)||(51987826-51987875)
chr1 (98-186)||(46133720-46133807)
chr1 (65-154)||(27418222-27418311)
chr1 (165-214)||(35616775-35616824)
chr1 (165-214)||(45064685-45064734)
chr1 (167-212)||(49611562-49611607)
chr1 (165-213)||(8560839-8560887)
chr1 (165-213)||(49610706-49610754)
chr1 (475-531)||(51164776-51164832)
chr1 (165-213)||(51988464-51988512)
chr1 (82-153)||(7219068-7219138)
chr1 (82-153)||(51247888-51247958)
chr1 (82-153)||(51248439-51248509)
chr1 (164-214)||(1013471-1013521)
chr1 (18-52)||(6076636-6076670)
chr1 (179-213)||(16270901-16270935)
chr1 (179-213)||(38930574-38930608)
chr1 (164-214)||(45065385-45065435)
chr1 (165-207)||(48870753-48870795)
chr1 (82-155)||(37725437-37725509)
chr1 (165-213)||(194701-194749)
chr1 (166-214)||(8561737-8561785)
chr1 (122-214)||(11032176-11032268)
chr1 (166-206)||(14924681-14924721)
chr1 (166-206)||(14925343-14925383)
chr1 (165-213)||(37874064-37874112)
chr1 (167-215)||(48869767-48869815)
[»] scaffold0332 (1 HSPs)
scaffold0332 (70-213)||(9162-9306)
[»] scaffold0700 (1 HSPs)
scaffold0700 (74-188)||(5344-5457)
[»] scaffold0155 (1 HSPs)
scaffold0155 (164-213)||(17339-17388)


Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-122; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 353 - 597
Target Start/End: Original strand, 48705313 - 48705554
Alignment:
Q  353 gcaattagtaagaattaccgtgtgcagctgcagcgacgacgtccctatgagaatcccttacgatgagttgaattctggttttgtaatgagaatgagagag 452  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48705313 gcaattagtaagaattaccgtgtgcagctgcagcgacgacgtccctatgagaatcccttacgatgagttgaattctggttttgtaatgagaatgagagag 48705412  T
Q  453 atagaaatctgagagtgacatgtttatgcagctcaatcctatcttcccaaccgtttcattactgctaatatcaattacagctcccactttcactacaata 552  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48705413 atagaaatctgagagtgacatgtttatgcagctcaatcctatcttcccaaccgtttcattactgctaatatcaattacagctcccactttcactacaata 48705512  T
Q  553 ttactttcatttttagtaatttgtgccaatattccacccaaaaga 597  Q
    ||||||||||| |   || ||||||||||||||||||||||||||    
T  48705513 ttactttcattct---tactttgtgccaatattccacccaaaaga 48705554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 345 - 601
Target Start/End: Original strand, 48715295 - 48715551
Alignment:
Q  345 agagagatgcaattagtaagaattaccgtgtgcagctgcagcgacgacgtccctatgagaatcccttacgatgagttgaattctggttttgtaatgagaa 444  Q
    |||||| |||||||||||| |||||||||||||||| |||| |||||||||| |||| |||||||| | |||||||||||||||||||||||||||||||    
T  48715295 agagaggtgcaattagtaataattaccgtgtgcagcggcagagacgacgtccttatgggaatccctaaggatgagttgaattctggttttgtaatgagaa 48715394  T
Q  445 tgagagagatagaaatctgagagtgacatgtttatgcagctcaatcctatcttcccaaccgtttcattactgctaatatcaattacagctcccactttca 544  Q
    ||||| |||||||||||||| || |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  48715395 tgagaaagatagaaatctgaaagagacatgtttatgcagctcaatcctattttcccaaccgttccattactgctaacatcaattacagctcccactttca 48715494  T
Q  545 ctacaatattactttcatttttagtaatttgtgccaatattccacccaaaagaataa 601  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  48715495 ctacaatattactctcatttttagtaatttgtgccaatattccacccaaaagaataa 48715551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 36750240 - 36750050
Alignment:
Q  18 acttgttagtgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgaga 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36750240 acttgttagcgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgaga 36750141  T
Q  118 gagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  36750140 gagtatgataagaatgtattcctcatttaatctaatgaacatgatcaacttttccatggtggaaaagaactctcctttcccaaattaaatg 36750050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 52492132 - 52492330
Alignment:
Q  18 acttgttagtgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgaga 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52492132 acttgttagcgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgaga 52492231  T
Q  118 gagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctcc 216  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||| ||| ||||||| |||||||||||||||| |||||||    
T  52492232 gagtatgataagaatgtattcctcatttaatctaatggacatgaacaacttttccatggtggaaaagaactctcatttcccaaattaaatgacacctcc 52492330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 36750337 - 36750486
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatca 164  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||  ||| | |||||||||||||||||||||||||||||    
T  36750337 acatgaaagagagagtgtgaaagatagtataaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatgaacatgatca 36750436  T
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36750437 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 36750486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 57 - 212
Target Start/End: Complemental strand, 38922900 - 38922744
Alignment:
Q  57 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatga 155  Q
    ||||||| ||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||||||||| |||| | || ||||||||||||||||     
T  38922900 gtgtgaggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgtttctcatttaatctaatgg 38922801  T
Q  156 acatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 212  Q
    | |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  38922800 atatgatcaactttcccatggtaggaaataactctcctttcccaaattaaatggcac 38922744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 65 - 215
Target Start/End: Original strand, 32490094 - 32490245
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||| ||| ||| |||||||| ||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  32490094 acatgaaagagggagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 32490193  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 215  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| |||||    
T  32490194 aacttttccatggtgggaaagaactctcctttcccaaattaaatggtacctc 32490245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 41755648 - 41755498
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||||||    
T  41755648 acatgaaagagagagtgtgaaagatagtataaaaaaataatatagtggttgagagagtatgatagaaatatgttcctcatttaatctaatgaacatgatc 41755549  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    || |||| ||||||||||||||||||||||||||||||||||||| |||||    
T  41755548 aattttctcatggtgggaaaaaactctcctttcccaaattaaatgacacct 41755498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 19132711 - 19132860
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||  ||| |||||| | ||||| ||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  19132711 acatgaaagagagaatgtgaaagataatataaaaaaataatccagtggttgagagagtatgataagaatatgttcctcatttaatctaatggacatgatc 19132810  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  19132811 aactttcccatggtgggaaagaactttcctttcccaaattaaatggcacc 19132860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 38923564 - 38923713
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||| |||||||||||||||||||||||||||||  ||| | |||||||||||||||||||||||| |||    
T  38923564 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatgaacattatc 38923663  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||| ||||||||||||| ||||||| |||||||||||||||||||||    
T  38923664 aacttttccatggtgggaaagaactctcatttcccaaattaaatggcacc 38923713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 45242215 - 45242067
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  45242215 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 45242116  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 212  Q
    |||||||||||| ||| ||| ||||||| ||||||||||||||||||||    
T  45242115 aactttcccatgatggaaaagaactctcatttcccaaattaaatggcac 45242067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 41756331 - 41756481
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||| ||||||||| ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  41756331 acatgaaagagagagtgtgaaagatagtataaaaaaataatctaatggttgagagagtatgataggaatatgttcctcatttaatctaatgaacatgatc 41756430  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||| ||||||| ||||||||||||| || ||||||| |||||    
T  41756431 aactttcccatgatgggaaagaactctcctttcctaacttaaatgacacct 41756481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 44687062 - 44687212
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||| ||||||||| ||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  44687062 acatgaaagagagagtgtgaaagatagtataaaaaaataatctaatggttgagagagtatgataggaatattttcctcatttaatctaatgaatatgatc 44687161  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||| ||||||||| ||| || |||||||||||||||||||||||||||    
T  44687162 aacttttccatggtggaaaagaattctcctttcccaaattaaatggcacct 44687212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 65 - 211
Target Start/End: Complemental strand, 3971141 - 3970994
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||| ||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  3971141 acatgaaagagagagtgtgaaagatagtataaaaaaataatcaagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 3971042  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 211  Q
    |||||| ||||||||  ||||||||||| |||||||||||||||||||    
T  3971041 aacttttccatggtgaaaaaaaactctcatttcccaaattaaatggca 3970994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 19132681 - 19132563
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||||||||||||| || ||||| ||||||||||    
T  19132681 aaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatagtaggaaagaactctcctt 19132582  T
Q  195 tcccaaattaaatggcacc 213  Q
    |||||||||||||||||||    
T  19132581 tcccaaattaaatggcacc 19132563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 44686403 - 44686254
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||||||||| |||| | || |||||||||||||||| ||||||||    
T  44686403 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggacatgatc 44686304  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||| |||||| | ||||||||||||||| ||||||||||||||||||    
T  44686303 aactttctcatggt-gaaaaaaactctccttttccaaattaaatggcacct 44686254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 45242886 - 45243035
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||| | ||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||  | ||||||    
T  45242886 acatgaaagagagagtgtgaaagataatataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatagatatgatc 45242985  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  45242986 aactttcccatggtggaaaagaactcttctttcccaaattaaatggcacc 45243035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 65 - 211
Target Start/End: Original strand, 3998740 - 3998887
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||  |||||||| ||||| ||||||| ||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  3998740 acatgaaagagagagtgtaaaagatagtataaaaaaataatcaagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 3998839  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 211  Q
    |||||| ||||||||  ||||||||||| |||||||||||||||||||    
T  3998840 aacttttccatggtgaaaaaaaactctcatttcccaaattaaatggca 3998887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 3971801 - 3971951
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||| |||||||||||||||||||||||||||||  ||| | ||||||||||||||||||| | ||||||    
T  3971801 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggatatgatc 3971900  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||  ||||||| |||| || ||||| ||||||||||||||||    
T  3971901 aactttcccatcatgggaaagaactttcatttcctaaattaaatggcacct 3971951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 3998077 - 3997927
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||||||||||||||||||||||||  ||| | ||||||||||||||||||| | ||||||    
T  3998077 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggatatgatc 3997978  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||  ||||||| |||| || ||||| ||||||||||||||||    
T  3997977 aactttcccatcatgggaaagaactttcatttcctaaattaaatggcacct 3997927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 52492035 - 52491891
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||||||||||||||||||||||||  ||| | ||||| ||||||||||||| ||||||||    
T  52492035 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttccttatttaatctaatggacatgatc 52491936  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||| |||     ||||| |||||||||||||||||||||||||||||    
T  52491935 aacttttcca-----ggaaagaactctcctttcccaaattaaatggcacc 52491891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 32490064 - 32489946
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    ||||||||||  |||||||||||||||||||||  ||| | ||||| ||||||||||||| |||||||||||||||||||||||| ||| || |||||||    
T  32490064 aaaaaataattcagtggttgagagagtatgatagaaatatgttccttatttaatctaatggacatgatcaactttcccatggtggaaaagaattctcctt 32489965  T
Q  195 tcccaaattaaatggcacc 213  Q
    |||||||||||||||||||    
T  32489964 tcccaaattaaatggcacc 32489946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 65 - 189
Target Start/End: Complemental strand, 45500620 - 45500497
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatca 164  Q
    |||||||||||||||||||||||||||   ||| |||||||||||| |||||||||||  |||||||||| ||||||||||||||||||| |||| ||||    
T  45500620 acatgaaagagagagggtggaagatagataaaacaataatctagtg-ttgagagagtagaataagaatgtgttcctcatttaatctaatggacataatca 45500522  T
Q  165 actttcccatggtgggaaaaaactc 189  Q
    |||||||||| |||| || ||||||    
T  45500521 actttcccattgtggaaacaaactc 45500497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 230 - 283
Target Start/End: Original strand, 48715120 - 48715173
Alignment:
Q  230 tcatttatccgtgaactgaaactcattcatatttatcacaattattaaggaaaa 283  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48715120 tcattcatccgtgaactgaaactcattcatatttatcacaattattaaggaaaa 48715173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 74 - 186
Target Start/End: Original strand, 8436574 - 8436685
Alignment:
Q  74 agagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttccca 173  Q
    |||||| ||||||||||||||||||||||||||| | ||||||| ||||  |||| ||||| |||| ||||||||| |||| |||| |||||||||  ||    
T  8436574 agagagagtggaagatagtgtaaaaaataatctaat-gttgagaaagtagtataaaaatgtgttccacatttaatcaaatgcacattatcaactttttca 8436672  T
Q  174 tggtgggaaaaaa 186  Q
    |||||| ||||||    
T  8436673 tggtggaaaaaaa 8436685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 8440119 - 8440233
Alignment:
Q  74 agagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttccca 173  Q
    |||||| ||| ||||||||||||||||||||||| || |||||||||||  |||| ||||| |||| ||||||||| |||| |||| |||||||||  ||    
T  8440119 agagagagtgaaagatagtgtaaaaaataatctaatg-ttgagagagtagtataataatgtgttccacatttaatcaaatgcacattatcaactttttca 8440217  T
Q  174 tggtgggaaaaaactc 189  Q
    |||||  |||||||||    
T  8440218 tggtgaaaaaaaactc 8440233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 31556217 - 31556264
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  31556217 ctttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 31556264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 37105076 - 37105127
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 215  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||||||||    
T  37105076 aactttcccatggtgggaaaaaagtctcgtttcccaaattaaacggcacctc 37105127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 14667345 - 14667296
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  14667345 aactttcccatggtgggaaaaaa-tctcctttcccaaattaaacggcacct 14667296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 8653622 - 8653709
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatg 154  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||| |||||| || |||||||||| ||| || ||||||| ||| ||||    
T  8653622 acatgaaagagagaggg-ggaagatagtgtagaaaatgatctagt-gttgagggaatatgataagagtgtgtttctcatttgatcaaatg 8653709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 49757181 - 49757230
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  49757181 aactttcccatggtaggaaaaaagtctcctttcccaaattaaacggcacc 49757230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 42145277 - 42145325
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 212  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  42145277 aactttcctatggtggaaaaaaagtctcctttcccaaattaaatggcac 42145325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 8427346 - 8427276
Alignment:
Q  82 tggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaat 153  Q
    ||||||||||||| || || ||||||||| ||||||||| ||||||||||| | ||| ||||||||||||||    
T  8427346 tggaagatagtgtgaagaaaaatctagtg-ttgagagagcatgataagaatatgttcttcatttaatctaat 8427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 17227014 - 17226968
Alignment:
Q  167 tttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||    
T  17227014 tttcccatggtgggaaagaaatctcctttcccaaattaaatgccacc 17226968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 49756324 - 49756274
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||| |||  |||||| ||||||||||||||||||    
T  49756324 aactttcccatggtgggaaataacattccttttccaaattaaatggcacct 49756274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 11267588 - 11267651
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataaga 130  Q
    ||||| ||||||||||| |||||||||||||||||||||| |||||| |||  |||||||||||||    
T  11267588 acatggaagagagaggg-ggaagatagtgtaaaaaataatatagtgg-tgatggagtatgataaga 11267651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 21811926 - 21811879
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||| |||||||| |||| |||||||||||||| ||||||    
T  21811926 ctttcccatggtaggaaaaaagtctcatttcccaaattaaacggcacc 21811879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 25025304 - 25025234
Alignment:
Q  82 tggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaat 153  Q
    ||||||||||||| ||||| |||||||| |||||||||| ||| ||||||| | ||| ||| ||||||||||    
T  25025304 tggaagatagtgtgaaaaaaaatctagt-gttgagagagcatgttaagaatatgttcttcacttaatctaat 25025234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 31556235 - 31556188
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||  ||||||| ||||||||||| |||||||||||||||||    
T  31556235 ctttcccatcatgggaaagaactctccttttccaaattaaatggcacc 31556188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 32994974 - 32994927
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 211  Q
    |||||||||||| |||||||||| | | ||||||||||||||||||||    
T  32994974 aactttcccatgatgggaaaaaaatgtgctttcccaaattaaatggca 32994927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 46719710 - 46719659
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 215  Q
    |||||||||||| || |||||||||  | |||||||||||||||||||||||    
T  46719710 aactttcccatgatgagaaaaaactagcatttcccaaattaaatggcacctc 46719659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 47737629 - 47737699
Alignment:
Q  82 tggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaat 153  Q
    ||||||||||||| || || ||||||||| ||||||||| ||||||||||| | ||| ||| ||||||||||    
T  47737629 tggaagatagtgtgaagaaaaatctagtg-ttgagagagcatgataagaatatgttcttcacttaatctaat 47737699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 37104401 - 37104363
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaat 202  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  37104401 aactttcccatggtggaaaaaaagtctcctttcccaaat 37104363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 38923472 - 38923438
Alignment:
Q  179 ggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||| |||||||||||||||||||||||||||||    
T  38923472 ggaaagaactctcctttcccaaattaaatggcacc 38923438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 45242307 - 45242341
Alignment:
Q  179 ggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||| |||||||||||||||||||||||||||||    
T  45242307 ggaaagaactctcctttcccaaattaaatggcacc 45242341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 17227955 - 17227996
Alignment:
Q  172 catggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||| || ||||||||||||||||||||| ||||    
T  17227955 catggtgggaaagaagtctcctttcccaaattaaatgccacc 17227996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 43638078 - 43638127
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  43638078 actttcccatgatgggaaagaagtttactttcccaaattaaatggcacct 43638127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 49749173 - 49749124
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||| ||| |||||||||| | ||||||||||| |||||||||||||    
T  49749173 actttcctatgatgggaaaaaaatttcctttcccaagttaaatggcacct 49749124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 50305167 - 50305212
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtg 110  Q
    ||||| ||||||||||||||||||||| ||||| |||||| |||||    
T  50305167 acatggaagagagagggtggaagatagcgtaaagaataatatagtg 50305212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 38337478 - 38337518
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 206  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  38337478 ctttcccatggtgggaaacaacttccctttcccaaattaaa 38337518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 39901894 - 39901846
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||||||| ||||||| |||||||  ||||| ||||||    
T  39901894 actttcccatggtgggaaagaactctcatttcccaggttaaacggcacc 39901846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 172; Significance: 4e-92; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 38072144 - 38072339
Alignment:
Q  18 acttgttagtgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgaga 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38072144 acttgttagcgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgaga 38072243  T
Q  118 gagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  38072244 gagtatgataagaatgtattcatcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcatttcccaaattaaatggcacc 38072339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 7677663 - 7677855
Alignment:
Q  18 acttgttagtgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgaga 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  7677663 acttgttagcgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatattgtaaaaaataatttagtg-ttgaga 7677761  T
Q  118 gagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 211  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7677762 gaatatgataagaatgtgttcctcatttaatctaatgaacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggca 7677855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 4261400 - 4261209
Alignment:
Q  18 acttgttagtgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgaga 117  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4261400 acttgttagcataccattttcaaggatcaaacaaatatagtgtgagaacatgaaagagagaggttggaagatagtgtaaaaaataatctagtggttgaga 4261301  T
Q  118 gagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgg 209  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||| ||||||||||||| |||||||||||    
T  4261300 gagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcccatggtagaaaagaactctcctttcctaaattaaatgg 4261209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 17145772 - 17145622
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa--taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgat 162  Q
    ||||||||||||||| ||| |||||||| |||||||  ||||||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||    
T  17145772 acatgaaagagagagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgat 17145673  T
Q  163 caactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17145672 caactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 17145622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 38072047 - 38071897
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  38072047 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 38071948  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  38071947 aactttcccatgatgggaaagaactctcctttcctaaattaaatggcacct 38071897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 668328 - 668179
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||| |||||||||||||||||||| |||| | ||| ||||||||||||||| ||||||||    
T  668328 acatgaaagagagagtgtgaaagatagtataaaaaaataatctggtggttgagagagtatgataggaatatgttcttcatttaatctaatggacatgatc 668229  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  668228 aactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 668179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 37864206 - 37864356
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||| |||| | || |||||||||||||||| ||||||||    
T  37864206 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggacatgatc 37864305  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  37864306 aactttcccatggtgggaaagaactcttatttcccaaattaaatggcacct 37864356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 669002 - 669151
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||| |||| | |||||||||| |||||||| | ||||||    
T  669002 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttgatctaatggatatgatc 669101  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  669102 aactttcctatggtgggaaaaaactctcatttcccaaattaaatggcacc 669151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 4261495 - 4261645
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||| ||||||||| |||||||||||||||||||  ||| | ||||||||||||||||||| | ||||||    
T  4261495 acatgaaagagagagtgtgaaagatagtataaaaaaataatctaatggttgagagagtatgatagaaatatgttcctcatttaatctaatggagatgatc 4261594  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  4261595 aactttcccatggtgggaaagaactctcctttcctaaattaaatggcacct 4261645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 96 - 214
Target Start/End: Complemental strand, 38778971 - 38778853
Alignment:
Q  96 aaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctccttt 195  Q
    |||||||||||||||||||||||||||||||| |||| |  |||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||    
T  38778971 aaaaataatctagtggttgagagagtatgataggaatatgctcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctccttt 38778872  T
Q  196 cccaaattaaatggcacct 214  Q
    |||||||||||||||||||    
T  38778871 cccaaattaaatggcacct 38778853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 99 - 213
Target Start/End: Original strand, 38779498 - 38779611
Alignment:
Q  99 aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttccc 198  Q
    |||||||||||| |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  38779498 aataatctagtg-ttgagagagtattataagaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttccc 38779596  T
Q  199 aaattaaatggcacc 213  Q
    |||||||||||||||    
T  38779597 aaattaaatggcacc 38779611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 7677566 - 7677421
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||  |||||||| ||||||| |||| ||||||||||||||||||||||  ||| | ||||||||||||||||||| ||||||||    
T  7677566 acatgaaagagagagtgtaaaagatagtataaaaaaataatttagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatc 7677467  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatgg 209  Q
    ||||||  |||||||||||| || ||||||||||||||||||||||    
T  7677466 aactttttcatggtgggaaagaattctcctttcccaaattaaatgg 7677421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 41194659 - 41194512
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatca 164  Q
    |||||||||||||| | || |||||| | ||||||||||| ||||| | || |||||||||||||||| | ||||||||| ||| ||||| ||||||| |    
T  41194659 acatgaaagagagatgatgaaagataatataaaaaataatttagtg-tggaaagagtatgataagaatatgttcctcatt-aatttaatggacatgatta 41194562  T
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41194561 actttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 41194512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 17145802 - 17145920
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    ||||||||||||||||||||||||||||||||| |||| | ||  ||||||||||||||| ||||||||||||||||||| ||   ||| ||||||||||    
T  17145802 aaaaaataatctagtggttgagagagtatgataggaatatgttattcatttaatctaatggacatgatcaactttcccatagtaaaaaagaactctcctt 17145901  T
Q  195 tcccaaattaaatggcacc 213  Q
    |||||||||||||||||||    
T  17145902 tcccaaattaaatggcacc 17145920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 37468972 - 37469053
Alignment:
Q  132 tgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37468972 tgtattcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 37469053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 65 - 189
Target Start/End: Complemental strand, 32859380 - 32859257
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatca 164  Q
    ||||||||| |||||||||||||||||||||||||||||| || | ||||||||||||  |||||||||| |||| |||||||||||||| | |  ||||    
T  32859380 acatgaaagtgagagggtggaagatagtgtaaaaaataatttaat-gttgagagagtagtataagaatgtgttccacatttaatctaatgcatactatca 32859282  T
Q  165 actttcccatggtgggaaaaaactc 189  Q
    |||||||| || ||  |||||||||    
T  32859281 actttcccgtgatgaaaaaaaactc 32859257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 37468967 - 37468909
Alignment:
Q  156 acatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37468967 acatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 37468909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 213
Target Start/End: Original strand, 24322299 - 24322399
Alignment:
Q  113 tgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 212  Q
    |||||||||||||||| ||||| |||||||||| |||||| |  ||  |  | |||||||||||||||| ||||||  ||||||||||||||||||||||    
T  24322299 tgagagagtatgataaaaatgtgttcctcatttgatctaacggtcaaaaaaacctttcccatggtgggataaaactaacctttcccaaattaaatggcac 24322398  T
Q  213 c 213  Q
    |    
T  24322399 c 24322399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 115 - 215
Target Start/End: Original strand, 44909309 - 44909409
Alignment:
Q  115 agagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||| | |||||||||||||||| ||| || |  ||  |  | |||||||||||||||||||||||  |||||||||||||||| |||||||    
T  44909309 agagagtatgattaaaatgtattcctcatttgatccaacggccaaaaaaacctttcccatggtgggaaaaaacttacctttcccaaattaaacggcacct 44909408  T
Q  215 c 215  Q
    |    
T  44909409 c 44909409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 29006396 - 29006346
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  29006396 aactttcccatggtgggaaaaaacaagcctttcccaaattaaatggcacct 29006346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 20890247 - 20890206
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaa 206  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  20890247 actttcccatggtgggaaaaaactgtcctttcccaaattaaa 20890206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 42607198 - 42607095
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    ||||||||||| |||| |||| |||  ||||||||| ||| || ||||||| |||||||| |||  | ||||||||||||||||||||| || || ||||    
T  42607198 aaaaaataatcaagtg-ttgatagatcatgataagattgtgtttctcatttgatctaatggacaaaaacaactttcccatggtgggaaacaattcccctt 42607100  T
Q  195 tccca 199  Q
    |||||    
T  42607099 tccca 42607095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 45887981 - 45888029
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||    
T  45887981 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgccacct 45888029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 47331954 - 47332002
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||    
T  47331954 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgtcacct 47332002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 29007198 - 29007248
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||||||||||||||   |||||||||||||||||| |||||    
T  29007198 aactttcccatggtgggaaaaaacaagcctttcccaaattaaatgacacct 29007248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 41224842 - 41224892
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||||    
T  41224842 aactttcccatggtgggaaaaaataagcctttcccaaattaaatggcacct 41224892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 40257759 - 40257836
Alignment:
Q  122 atgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttccca 199  Q
    ||||||||||||| || ||||||| |||||||| |||  | |||||||| |||||||||||| ||||| | |||||||    
T  40257759 atgataagaatgtgtttctcatttgatctaatggacaaaaacaactttctcatggtgggaaacaactcccatttccca 40257836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 4985395 - 4985443
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||||||  | |||||||||||||||| |||||    
T  4985395 ctttcccatggtgggaaaaaactagcatttcccaaattaaatgtcacct 4985443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 4989493 - 4989541
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||||||  | |||||||||||||||| |||||    
T  4989493 ctttcccatggtgggaaaaaactagcatttcccaaattaaatgtcacct 4989541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 27599303 - 27599211
Alignment:
Q  121 tatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||| ||| | | |||||||||||  ||   | |||||||||||||||||||| ||||| |||||||||  ||||||| ||||    
T  27599303 tatgataagaatgtgttcattacttaatctaatggtcaaatttaactttcccatggtgggaaacaactcccctttcccattttaaatgccacc 27599211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 29314630 - 29314578
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctcc 216  Q
    |||||||||||||||| |||||||   |||||| |||||||||||||||||||    
T  29314630 aactttcccatggtggaaaaaaacaagcctttctcaaattaaatggcacctcc 29314578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 45887326 - 45887286
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 206  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  45887326 ctttcccatggtgggaaaaaactagcctttcccaaattaaa 45887286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 27855695 - 27855625
Alignment:
Q  82 tggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaat 153  Q
    ||||||||||||| || || ||||||||| ||||||||| ||||||||||| | ||| ||| ||||||||||    
T  27855695 tggaagatagtgtgaagaaaaatctagtg-ttgagagagcatgataagaatatgttcttcacttaatctaat 27855625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 29315257 - 29315360
Alignment:
Q  111 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggc 210  Q
    |||||| ||||||||||||| ||||||| |||||  ||||||||   |  |   ||||||||||| ||||||||||||   |||||||||||||||| ||    
T  29315257 gttgagggagtatgataagagtgtattcttcattagatctaatggttaaaacttactttcccatgatgggaaaaaactagtctttcccaaattaaattgc 29315356  T
Q  211 acct 214  Q
    ||||    
T  29315357 acct 29315360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 41195275 - 41195329
Alignment:
Q  73 gagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataa 128  Q
    |||||||| || |||||||| |||||||||||||||| || |||||||||||||||    
T  41195275 gagagaggatgaaagatagtataaaaaataatctagt-gtggagagagtatgataa 41195329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 41533943 - 41533896
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||| ||||||||  |||||||||||||||| ||||||    
T  41533943 ctttcccatggtggaaaaaaacttacctttcccaaattaaacggcacc 41533896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 27600041 - 27600143
Alignment:
Q  111 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggc 210  Q
    ||||||||  |||||||||||||| ||| | | |||||||| ||  ||   | |||||||||||||||||||| ||||| |||||||||  ||||||| |    
T  27600041 gttgagagtctatgataagaatgtgttcattacttaatctagtggtcaaatttaactttcccatggtgggaaacaactcccctttcccattttaaatgcc 27600140  T
Q  211 acc 213  Q
    |||    
T  27600141 acc 27600143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 668420 - 668453
Alignment:
Q  179 ggaaaaaactctcctttcccaaattaaatggcac 212  Q
    ||||| ||||||||||||||||||||||||||||    
T  668420 ggaaagaactctcctttcccaaattaaatggcac 668453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 44896095 - 44896046
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||||| |||||||   ||||||||||||||| ||||||    
T  44896095 aactttcccatggtggggaaaaactagtctttcccaaattaaacggcacc 44896046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 48259820 - 48259861
Alignment:
Q  167 tttcccatggtgggaaaaaactctcctttcccaaattaaatg 208  Q
    ||||||||||||||||||||||  | ||||||||||||||||    
T  48259820 tttcccatggtgggaaaaaactaacatttcccaaattaaatg 48259861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 24321472 - 24321424
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||| ||| ||||| ||||||  ||||||||||||||||||||||||    
T  24321472 ctttcctatgatgggataaaactaacctttcccaaattaaatggcacct 24321424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 24322469 - 24322429
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 206  Q
    |||||||||| |||||||||| | |||||||||||||||||    
T  24322469 ctttcccatgatgggaaaaaagtttcctttcccaaattaaa 24322429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 40257697 - 40257594
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    ||||||||||| |||| |||| |||  ||||||||||||| || ||||||| |||||||| |||  |  |||||| ||||||| | ||| ||||||| ||    
T  40257697 aaaaaataatcaagtg-ttgatagatcatgataagaatgtgtttctcatttgatctaatggacaaaaataacttttccatggtcgaaaacaactctcatt 40257599  T
Q  195 tccca 199  Q
    |||||    
T  40257598 tccca 40257594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 164; Significance: 2e-87; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 5035130 - 5035324
Alignment:
Q  18 acttgttagtgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgaga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  5035130 acttgttagtgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaacataatttagtg-ttgaga 5035228  T
Q  118 gagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||    
T  5035229 gagtatgataagaatgtattcctcatttaatctaatggacatgatcaactttcctatggtggaaaagaactctcctttcccaaattaaatggcacc 5035324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 65 - 215
Target Start/End: Original strand, 34992163 - 34992314
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| |||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  34992163 acatgaaagagagagtgtgaaagatagtataaaaaaataatttagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 34992262  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34992263 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 34992314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 67 - 214
Target Start/End: Complemental strand, 41859457 - 41859309
Alignment:
Q  67 atgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaa 165  Q
    ||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||||||||| |||| | ||| ||||||||||||| | ||||||||||    
T  41859457 atgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatatgaatatgttcttcatttaatctaacggacatgatcaa 41859358  T
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41859357 ctttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 41859309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 37639860 - 37639718
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||| ||||||    
T  37639860 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatcataggaatatgttcctcatttaatctaatgaatatgatc 37639761  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 206  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  37639760 aactttcccatggtgggaaagaactctcctttcccaaattaaa 37639718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 32536857 - 32536708
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||||||||| |||| | |||| |||||||||||||| ||||||||    
T  32536857 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttccccatttaatctaatggacatgatc 32536758  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  32536757 aactttcccatggtgggaaagaactctcatttcctaaattaaatggcacc 32536708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 95 - 214
Target Start/End: Complemental strand, 5035016 - 5034897
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    ||||||||||||||||||||||||||||||||| |||| | ||||||||| ||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  5035016 aaaaaataatctagtggttgagagagtatgatatgaatatgttcctcattcaatctaatggacatgatcaactttcccatggtggaaaagaactctcctt 5034917  T
Q  195 tcccaaattaaatggcacct 214  Q
    ||||||||||||||||||||    
T  5034916 tcccaaattaaatggcacct 5034897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 38023773 - 38023624
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||||||||||||||||||||||||  ||| | ||||||||||||||||||||||||||||    
T  38023773 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatgaacatgatc 38023674  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||| ||||| ||| ||| || ||||||||||||||||||||| ||||    
T  38023673 aacttttccatgatggaaaagaattctcctttcccaaattaaatgacacc 38023624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 34992133 - 34992015
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    |||||||||| ||||||||||||||||||||||  ||| | ||||||||||||||||||| |||||||||||||| ||||||||| ||| ||||||| ||    
T  34992133 aaaaaataatttagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaacttttccatggtggaaaataactctcgtt 34992034  T
Q  195 tcccaaattaaatggcacc 213  Q
    |||||||||||||||||||    
T  34992033 tcccaaattaaatggcacc 34992015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 41859995 - 41860145
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| |||||||||||| |||||||||  ||| | ||||||||||||||||||| ||||||||    
T  41859995 acatgaaagagagagtgtgaaagatagtataaaaaaataatatagtggttgagaaagtatgatagaaatatgttcctcatttaatctaatggacatgatc 41860094  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||| |||| ||   ||| |||||| |||||||||||||||||||||||    
T  41860095 aacttttccatagtaaaaaataactcttctttcccaaattaaatggcacct 41860145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 32537387 - 32537534
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| | | |||||||| ||||| |||||||||||||||||||||||||||||||||| | ||||| ||||||| ||||| |||||||     
T  32537387 acatgaaagagagagtgcgaaagatagtataaaaaaataatctagtggttgagagagtatgataagaatatgttccttatttaatataatggacatgatt 32537486  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||| ||   ||| ||| ||||||| ||||||||||||||||| ||||    
T  32537487 aactttctca---tggaaaagaactctcatttcccaaattaaatggtacct 32537534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 38024430 - 38024492
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgata 127  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||    
T  38024430 acatgaaagagagagtgtgaaagatagtataaaaaataatctagtggttgagagagtatgata 38024492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 25876569 - 25876520
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  25876569 actttcccatggtgggaaaaaaatcttctttcccaaattaaatggcacct 25876520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 37640538 - 37640601
Alignment:
Q  141 catttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 205  Q
    ||||||||||||| |||||||||||||| ||||| |||  |||||||||||||||||||||||||    
T  37640538 catttaatctaataaacatgatcaactt-cccatagtgtaaaaaaactctcctttcccaaattaa 37640601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 61502 - 61453
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  61502 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacct 61453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 27918046 - 27918095
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  27918046 aactttcccatggtgggaaaaaagtctcatttcccaaattaaacggcacc 27918095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 1365877 - 1365829
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||    
T  1365877 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacc 1365829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 44098432 - 44098470
Alignment:
Q  176 gtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  44098432 gtgggaaagaactctcctttcccaaattaaatggcacct 44098470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 10501822 - 10501877
Alignment:
Q  73 gagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataaga 130  Q
    |||||||||| || ||||||||||||||||||||||| |||||| |||||||||||||    
T  10501822 gagagagggttgatgatagtgtaaaaaataatctagt-gttgag-gagtatgataaga 10501877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 41092221 - 41092172
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||| |||||||||||||||||   |||||||||||||||||||||||    
T  41092221 aacttttccatggtgggaaaaaacaagcctttcccaaattaaatggcacc 41092172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 39254835 - 39254787
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||| ||||||||||| || ||||||||||||||||||||| ||||    
T  39254835 actttcctatggtgggaaagaagtctcctttcccaaattaaatgccacc 39254787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 7818604 - 7818534
Alignment:
Q  82 tggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaat 153  Q
    ||||||||||||| || || ||||||||| ||||||||| ||||||||||| | ||| ||| ||||||||||    
T  7818604 tggaagatagtgtgaagaaaaatctagtg-ttgagagagcatgataagaatatgttcttcacttaatctaat 7818534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 10806078 - 10806008
Alignment:
Q  82 tggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaat 153  Q
    ||||||||||||| || || ||||||||| ||||||||| ||| ||||||| | ||| ||||||||||||||    
T  10806078 tggaagatagtgtgaagaaaaatctagtg-ttgagagagcatgttaagaatatgttcttcatttaatctaat 10806008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 39852759 - 39852829
Alignment:
Q  82 tggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaat 153  Q
    ||||||||||||| || || |||||||| |||||||||| ||| ||||||| ||||| ||| ||||||||||    
T  39852759 tggaagatagtgtgaagaaaaatctagt-gttgagagagcatgttaagaatatattcttcacttaatctaat 39852829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 41348193 - 41348146
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 211  Q
    ||||||||||||||||| |||||||  |||||||||||||||| ||||    
T  41348193 aactttcccatggtggggaaaaactaacctttcccaaattaaacggca 41348146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 43924537 - 43924490
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||| ||||  |||||||||||||||||| ||||    
T  43924537 ctttcccatggtgggaaacaacttccctttcccaaattaaatgccacc 43924490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 30272903 - 30273005
Alignment:
Q  112 ttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 211  Q
    ||||| ||||||||||| | ||||||| ||||| |||||||||   |  |   ||||||||||| |||||||||| | | ||||||||||||||| ||||    
T  30272903 ttgagggagtatgataaaagtgtattcttcattgaatctaatggttaaaacttactttcccatgatgggaaaaaagtttgctttcccaaattaaacggca 30273002  T
Q  212 cct 214  Q
    |||    
T  30273003 cct 30273005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 38778752 - 38778821
Alignment:
Q  83 ggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaat 153  Q
    |||||||||||| || || ||||||||| ||||||||||||| ||| ||| ||||| ||| ||||||||||    
T  38778752 ggaagatagtgtgaagaaaaatctagtg-ttgagagagtatgttaaaaatatattcttcacttaatctaat 38778821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 4364087 - 4364046
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaa 206  Q
    ||||||||||| |||||||||| | |||||||||||||||||    
T  4364087 actttcccatgatgggaaaaaagtttcctttcccaaattaaa 4364046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 7424562 - 7424611
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||||| |||||| ||| ||||| |||||||||| ||||||    
T  7424562 actttcccatggtggaaaaaaagtcttctttctcaaattaaattgcacct 7424611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 36936644 - 36936745
Alignment:
Q  112 ttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 211  Q
    ||||| ||||||||||| | ||||||| | ||| |||||||||   |  ||  ||||||||||| |||||||||| | | ||||||||||||||| ||||    
T  36936644 ttgagggagtatgataaaagtgtattctttattgaatctaatggttaaaatttactttcccatgatgggaaaaaagtttgctttcccaaattaaacggca 36936743  T
Q  212 cc 213  Q
    ||    
T  36936744 cc 36936745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 39255752 - 39255801
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||||||||| || |||| |||||||| ||||||| |||||    
T  39255752 actttcccatggtgggaaagaagtctcatttcccaagttaaatgccacct 39255801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 44751656 - 44751607
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||| ||||||| || ||||||||||||| ||||||| |||||    
T  44751656 actttcccatgatgggaaagaagtctcctttcccaagttaaatgccacct 44751607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 62240 - 62288
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||| ||||||||||| || ||||||||| ||||||||||| ||||    
T  62240 actttcctatggtgggaaagaagtctcctttctcaaattaaatgtcacc 62288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 36936418 - 36936466
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||| |||||||||| | | ||||||||||||||| ||||||    
T  36936418 actttcccatgatgggaaaaaagtttgctttcccaaattaaacggcacc 36936466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 42345214 - 42345166
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  42345214 actttcccatgatgggaaagaagtttactttcccaaattaaatggcacc 42345166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 160; Significance: 6e-85; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 27415 - 27221
Alignment:
Q  18 acttgttagtgtaccattttcaaggatcaaacaaatttagtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgaga 117  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  27415 acttgttagcgtaccattttcaaggatcaaacaaatttagtatgagaacatgaaagagagagggtggaagatagtgtaaaaaataatttagtg-ttgaga 27317  T
Q  118 gagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  27316 gagtatgataagaatgtgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 27221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 27546 - 27623
Alignment:
Q  136 ttcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27546 ttcctcatttaatctaatggatatgatcaactttcccatggtgggaaaaaactctccttttccaaattaaatggcacc 27623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 1e-64; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 57 - 214
Target Start/End: Complemental strand, 33002087 - 33001931
Alignment:
Q  57 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaa 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||| |    
T  33002087 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatttagtg-ttgagagaatatgataagaatgtattcctcatttaatctaatgga 33001989  T
Q  157 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  33001988 catgatcaacttttccatggtgggaaagaactctcctttcccaaattaaatggtacct 33001931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 33002715 - 33002865
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  33002715 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 33002814  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  33002815 aactttcccatggtgggaaagaactctcctttcccaaattaaatgacacct 33002865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 686565 - 686417
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| ||||||||    
T  686565 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagaatatgataggaatatattcctcatttaatctaatggacatgatc 686466  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  686465 aactttcccatggtggga-aaaactctcctttcccaaattaaatggcacc 686417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 15183916 - 15184065
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||  ||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  15183916 acatgaaagagagagtgtgaaagatagcataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 15184015  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15184016 aactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 15184065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 67 - 214
Target Start/End: Complemental strand, 8204267 - 8204119
Alignment:
Q  67 atgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaa 165  Q
    ||||||||||||| ||| |||||||| ||||||| ||||||||||||||||| ||||||||| |||| | ||||||||||||||||||| ||||||||||    
T  8204267 atgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagatagtatgataggaatatgttcctcatttaatctaatggacatgatcaa 8204168  T
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8204167 ctttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 8204119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 8040344 - 8040194
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  8040344 acatgaaagagagagtgtgaaagatagtataaaaaaataatgtagtggttgagagagtatgataagaatatattcctcatttaatctaatggacatgatc 8040245  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||| | ||||||| |||| |||||||||||||||||||||||||    
T  8040244 aactttcccacgatgggaaagaactgtcctttcccaaattaaatggcacct 8040194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 15183238 - 15183088
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||| ||||| ||| |||||||| ||||||| |||||||||||||||||||||||||||  ||| | ||||||||||||||||||| ||||||||    
T  15183238 acatgaaagtgagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatc 15183139  T
Q  164 aactttcccatggtgggaaa-aaactctcctttcccaaattaaatggcacc 213  Q
    ||||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  15183138 aactttctcatgatgggaaataaactctcctttcccaaattaaatggcacc 15183088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 12190078 - 12190207
Alignment:
Q  85 aagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaa 184  Q
    |||||| | |||||||||||||| || ||||||||||||||||  ||| | ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12190078 aagataatataaaaaataatctaatgattgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaa 12190177  T
Q  185 aactctcctttcccaaattaaatggcacct 214  Q
    ||||||| ||||||||||||||||||||||    
T  12190178 aactctcttttcccaaattaaatggcacct 12190207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 95 - 214
Target Start/End: Original strand, 36626560 - 36626679
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| | |||||||||||||||||||||||||||| ||||||| ||    
T  36626560 aaaatataatctagtggttgagagagtatgataagaatatattccttatttaatataacggacatgatcaactttcccatggtgggaaagaactctcatt 36626659  T
Q  195 tcccaaattaaatggcacct 214  Q
    ||||||||||||||||||||    
T  36626660 tcccaaattaaatggcacct 36626679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 687247 - 687395
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| |||| ||||| |||||||||||||||| |||| | ||||||||||||||||||| |||| |||    
T  687247 acatgaaagagagagtgtgaaagatagtataaaaaaataatttagtgattgagagagtatgataggaatatgttcctcatttaatctaatggacataatc 687346  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 212  Q
    |||||| |||| |||| ||| ||||||||||||||||||||||||||||    
T  687347 aacttttccatagtggaaaagaactctcctttcccaaattaaatggcac 687395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 95 - 214
Target Start/End: Original strand, 8040374 - 8040493
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    |||||||||||||||||||||||||||||||||  ||| | ||||  ||||||||||||| ||||||| |||||||||| ||||||||| || | |||||    
T  8040374 aaaaaataatctagtggttgagagagtatgatagaaatatgttccctatttaatctaatggacatgattaactttcccacggtgggaaagaaatttcctt 8040473  T
Q  195 tcccaaattaaatggcacct 214  Q
    ||||||||||||||||||||    
T  8040474 tcccaaattaaatggcacct 8040493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 33283971 - 33284072
Alignment:
Q  113 tgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 212  Q
    |||||||||||||||| ||||| |||||||||| |||||| |  ||  |  | |||||||||||||||| ||||||  ||||||||||||||||||||||    
T  33283971 tgagagagtatgataaaaatgtgttcctcatttgatctaacggtcaaaaaaacctttcccatggtgggataaaactaacctttcccaaattaaatggcac 33284070  T
Q  213 ct 214  Q
    ||    
T  33284071 ct 33284072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 39950451 - 39950404
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  39950451 ctttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 39950404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 33283265 - 33283169
Alignment:
Q  113 tgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgg 209  Q
    |||||||||||||||| ||||| |||||||||| ||||||||  ||  |  | |||||||||| ||||| ||||||  |||||||||||||||||||    
T  33283265 tgagagagtatgataaaaatgtgttcctcatttgatctaatggtcaaaaaaacctttcccatgatgggataaaactaacctttcccaaattaaatgg 33283169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 2319313 - 2319266
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||    
T  2319313 ctttcccatggtgggaaaaaactagcctttcccaaattaaatgccacc 2319266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 4607513 - 4607470
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaat 207  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||    
T  4607513 aactttcccatggtgggaaaaaagtctactttcccaaattaaat 4607470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 16970979 - 16971081
Alignment:
Q  111 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggc 210  Q
    |||||| ||||||||||||| ||||||| |||||  ||||||||   |  |   ||||||||||| ||||||||||||   |||||||||||||||||||    
T  16970979 gttgagggagtatgataagagtgtattcttcattagatctaatggttaaaacttactttcccatgatgggaaaaaactagtctttcccaaattaaatggc 16971078  T
Q  211 acc 213  Q
    |||    
T  16971079 acc 16971081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 4608589 - 4608638
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||||| |||  |||||||||| |||||||||||||    
T  4608589 aactttcccatggtgggaaataacattcctttcccagattaaatggcacc 4608638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 13654981 - 13654932
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||| ||||||||||| || ||||||||||||||||||||| |||||    
T  13654981 actttcctatggtgggaaagaagtctcctttcccaaattaaatgtcacct 13654932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 2319968 - 2320016
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||| ||||||||||||||||  |||||||||||||||||| |||||    
T  2319968 ctttcctatggtgggaaaaaactagcctttcccaaattaaatgccacct 2320016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 26268391 - 26268343
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||||||  | |||||||||||||||| |||||    
T  26268391 ctttcccatggtgggaaaaaactaacatttcccaaattaaatgccacct 26268343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 33685824 - 33685772
Alignment:
Q  134 tattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaa 186  Q
    ||||| ||||||||||||||| |||| |||||||||  |||||||||||||||    
T  33685824 tattcttcatttaatctaatggacataatcaacttttacatggtgggaaaaaa 33685772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 39950444 - 39950480
Alignment:
Q  177 tgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||| |||||||||||||||||||||||||||||    
T  39950444 tgggaaagaactctcctttcccaaattaaatggcacc 39950480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 13404701 - 13404752
Alignment:
Q  163 caactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||||||||||||||   ||| ||||||||||||||| |||||    
T  13404701 caactttcccatggtgggaaaaaagagtccgttcccaaattaaatgccacct 13404752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 26269022 - 26269069
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||| ||||||||||||  |||||||||||||||||| ||||    
T  26269022 ctttcccatgatgggaaaaaactaacctttcccaaattaaatgccacc 26269069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 686667 - 686701
Alignment:
Q  179 ggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||| |||||||||||||||||||||||||||||    
T  686667 ggaaagaactctcctttcccaaattaaatggcacc 686701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 2458353 - 2458403
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||| ||||||||| |||||| |||| |||||||||||||| |||||||    
T  2458353 aacttttccatggtggaaaaaaagtctcatttcccaaattaaacggcacct 2458403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 33002618 - 33002584
Alignment:
Q  18 acttgttagtgtaccattttcaaggatcaaacaaa 52  Q
    ||||||||| |||||||||||||||||||||||||    
T  33002618 acttgttagcgtaccattttcaaggatcaaacaaa 33002584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 8226690 - 8226641
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||| |||||| ||||||||| ||| ||||| |||||||||||||||||    
T  8226690 acttttccatggagggaaaaaattcttctttctcaaattaaatggcacct 8226641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 31148444 - 31148493
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||| |||||||||| | | ||||||||||||||| ||||||    
T  31148444 aactttcccatgatgggaaaaaagtgtgctttcccaaattaaacggcacc 31148493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 39167442 - 39167483
Alignment:
Q  167 tttcccatggtgggaaaaaactctcctttcccaaattaaatg 208  Q
    ||||||||| ||||||| || |||||||||||||||||||||    
T  39167442 tttcccatgatgggaaagaagtctcctttcccaaattaaatg 39167483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 42518891 - 42518811
Alignment:
Q  74 agagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatg 154  Q
    |||||||||| || ||||| ||||| |||||| ||||| |||||| |||| ||||||||| | || ||||||||||||||||    
T  42518891 agagagggtgaaaaatagtataaaacaataatttagtg-ttgagatagtacgataagaatttgtttctcatttaatctaatg 42518811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 26688214 - 26688166
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  26688214 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 26688166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 26957945 - 26957897
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  26957945 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 26957897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 1e-61; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 39523164 - 39523319
Alignment:
Q  57 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaa 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||  |||||||||||||||||||||||| |    
T  39523164 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatttagtg-ttgagagagtatggtaaagatgtattcctcatttaatctaatgga 39523262  T
Q  157 catgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  39523263 catgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 39523319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 11417836 - 11417686
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaa-ataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  11417836 acatgaaagagagagtgtgaaagatagtataaaaatataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 11417737  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11417736 aactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 11417686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 26611182 - 26611332
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||  |||||||| ||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  26611182 acatgaaagagagagtgtaaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 26611281  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26611282 aactttcccatggtgggaaaaaactctcctttcccaaattaaatgacacct 26611332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 10424958 - 10425108
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||| | ||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| | ||||||    
T  10424958 acatgaaagagagagtgtgaaagataatataaaaaaataatctagtggttgagagagtatgataggaatatattcctcatttaatctaatggatatgatc 10425057  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  10425058 aactttcccatggtgggaaagaactctcctttcctaaattaaatggcacct 10425108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 21166274 - 21166424
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  21166274 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 21166373  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||||||||    
T  21166374 aactttcccatgatgggaaagaactctcctttctcaaattaaatggcacct 21166424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 29651231 - 29651381
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||  | ||||||    
T  29651231 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatagatatgatc 29651330  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29651331 aactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 29651381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 10424272 - 10424123
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||||||||||||||||||||||||  ||| | ||||||||||||||||||| ||||||||    
T  10424272 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatc 10424173  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  10424172 aactttcctatggtgggaaagaactctcctttcccaaattaaatggcacc 10424123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 57 - 209
Target Start/End: Original strand, 38143628 - 38143781
Alignment:
Q  57 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatga 155  Q
    ||||||| ||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||||     
T  38143628 gtgtgaggacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgg 38143727  T
Q  156 acatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgg 209  Q
    |||||| ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  38143728 acatgaccaactttcccatggtgggaaagaactctcatttcccaaattaaatgg 38143781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 45230514 - 45230365
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  45230514 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaatatgatc 45230415  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  45230414 aactttcccatggtgggaaagaactctcttttcccgaattaaatggcacc 45230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 36865616 - 36865765
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||  |||||||| ||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| | ||||||    
T  36865616 acatgaaagagagagtgtaaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggatatgatc 36865715  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  36865716 aactttcccatggtgggaaagaactctcctttcccaaattaaatgtcacc 36865765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 11417867 - 11417985
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  11417867 aaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctt 11417966  T
Q  195 tcccaaattaaatggcacc 213  Q
    |||||||||||||| ||||    
T  11417967 tcccaaattaaatgacacc 11417985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 26610495 - 26610350
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa--taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgat 162  Q
    ||||||||||||||| ||| |||||||| |||||||  ||||||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||    
T  26610495 acatgaaagagagagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgat 26610396  T
Q  163 caactttcccatggtgggaaaaaactctcctttcccaaattaaatg 208  Q
    ||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  26610395 caattttcccatggtgggaaagaactctcatttcccaaattaaatg 26610350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 38694850 - 38695002
Alignment:
Q  65 acatgaaagagagagggtggaagatagt-gt---aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatg 160  Q
    ||||||||||||||| ||| |||||||| ||   ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||  |||||    
T  38694850 acatgaaagagagagtgtgaaagatagtagtataaaaaaataatctagtggttgagagagtatgatatgaatattttcctcatttaatctaatagacatg 38694949  T
Q  161 atcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  38694950 atcaactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 38695002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 45235859 - 45236008
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||| |||||||  ||| | ||||||||||||||||||| |||||||     
T  45235859 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagaatatgatagaaatatgttcctcatttaatctaatggacatgatt 45235958  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  45235959 aactttcccatggtgggaaagaactctccttttccaaattaaatggcacc 45236008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 95 - 215
Target Start/End: Original strand, 31836390 - 31836510
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    |||||||||||||||||||||||||||||||||  ||| | ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  31836390 aaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctt 31836489  T
Q  195 tcccaaattaaatggcacctc 215  Q
    || ||||||||||||||||||    
T  31836490 tctcaaattaaatggcacctc 31836510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 29650564 - 29650416
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    |||||||| |||||| ||| |||||||| ||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  29650564 acatgaaaaagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 29650465  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 212  Q
    |||||||||| | ||| ||| ||||||| ||||||||||||||||||||    
T  29650464 aactttcccaagatggaaaagaactctcatttcccaaattaaatggcac 29650416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 38694820 - 38694702
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||||||    
T  38694820 aaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaatatgatcaacttttccatgctgggaaagaactctcctt 38694721  T
Q  195 tcccaaattaaatggcacc 213  Q
    | |||||||||||||||||    
T  38694720 ttccaaattaaatggcacc 38694702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 21165596 - 21165447
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaat-aatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||  ||| |||||||| |||||||| ||||||||||||||||||||||||||  ||| | |||||||||||||| |||| ||||||||    
T  21165596 acatgaaagagagactgtgaaagatagtataaaaaattaatctagtggttgagagagtatgatagaaatatgttcctcatttaatcaaatggacatgatc 21165497  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||| |||||||||||| |||| | ||||||||||||||||||||||    
T  21165496 aactttctcatggtgggaaagaactattctttcccaaattaaatggcacc 21165447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 95 - 214
Target Start/End: Original strand, 9939301 - 9939420
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    |||||||||| |||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| ||||    
T  9939301 aaaaaataatatagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactcccctt 9939400  T
Q  195 tcccaaattaaatggcacct 214  Q
    || |||||||||||||||||    
T  9939401 tctcaaattaaatggcacct 9939420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 39522524 - 39522374
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||| ||| | | |||||||| ||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||| | ||||||    
T  39522524 acatgaaagagggagtgcgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggatatgatc 39522425  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||  ||| |||| ||||||||||||||||||| |||||    
T  39522424 aactttcccatggtgaaaaagaactatcctttcccaaattaaatgacacct 39522374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 31835297 - 31835148
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaa-ataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||| |||| | |||||| |||||||||||| |||| |||    
T  31835297 acatgaaagagagagtgtgaaagatagtataaaaagataatctagtggttgagagagtatgataggaatatgttcctcgtttaatctaatggacataatc 31835198  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||| ||||||||||| |||| | ||||  ||||||||||||||||    
T  31835197 aactttcctatggtgggaaagaactatactttttcaaattaaatggcacc 31835148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 36864935 - 36864818
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    ||||||||||||||||||||||||||||||||| |||| | || |||||||||||||||| ||||||||||||||| ||||||| |||| ||||||||||    
T  36864935 aaaaaataatctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggacatgatcaactttctcatggtgagaaagaactctcctt 36864836  T
Q  195 tcccaaattaaatggcac 212  Q
    ||||||||||||| ||||    
T  36864835 tcccaaattaaatagcac 36864818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 67 - 214
Target Start/End: Complemental strand, 9939269 - 9939124
Alignment:
Q  67 atgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaa 165  Q
    ||||||||||||  ||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | || |||||||||||||||| ||||||||||    
T  9939269 atgaaagagagaatgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataagaatatgtttctcatttaatctaatggacatgatcaa 9939170  T
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||| |    ||| |||||| ||||||||||||||||| |||||    
T  9939169 ctttcccataga---aaagaactctactttcccaaattaaatgacacct 9939124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 95 - 195
Target Start/End: Complemental strand, 38143606 - 38143506
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||| ||||||| ||| ||||||||||    
T  38143606 aaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcctatggtggaaaagaactctcctt 38143507  T
Q  195 t 195  Q
    |    
T  38143506 t 38143506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 65 - 199
Target Start/End: Complemental strand, 25970250 - 25970120
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||    ||||||||||||||  || | || |||||||||||||||| |||| |||    
T  25970250 acatgaaagagagatggtggaagatagtgtaaaacaataatctagtg----agagagtatgataaagatttgtttctcatttaatctaatggacat-atc 25970156  T
Q  164 aactttcccatggtgggaaaaaactctcctttccca 199  Q
    |||||||||||||||||||| ||||| |||||||||    
T  25970155 aactttcccatggtgggaaacaactcccctttccca 25970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 65 - 199
Target Start/End: Original strand, 36451327 - 36451461
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||| |||||| || | ||  ||||||||||||||| |||| |||    
T  36451327 acatgaaagagagatggtggaagatagtgtaaaacaataatctagtg-ttgagagagtaggataaggatttgtttttcatttaatctaatggacataatc 36451425  T
Q  164 aactttcccatggtgggaaaaaactctcctttccca 199  Q
    |||||| |||||||| |||| |||||  ||||||||    
T  36451426 aacttttccatggtgagaaacaactcctctttccca 36451461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 11806244 - 11806129
Alignment:
Q  57 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaa 156  Q
    |||||||||||||||||||||||  || |  ||| |||||||||||| |||||| ||||||||||| ||||| ||||| ||||||||||||||||||| |    
T  11806244 gtgtgagaacatgaaagagagag--tgaataataatgtaaaaaataaactagtg-ttgagagagtaggataaaaatgtgttcctcatttaatctaatgga 11806148  T
Q  157 catgatcaactttcccatg 175  Q
    |||||| ||||||||||||    
T  11806147 catgattaactttcccatg 11806129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 65 - 196
Target Start/End: Complemental strand, 23383457 - 23383327
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatca 164  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||  ||||  ||||||||||||| ||| ||| |||||| ||| |||| | |  || |    
T  23383457 acatggaagagagagggtggaagatagtgtaaaaattaatctagt-attgatggagtatgataagagtgtgttcttcatttgatcgaatggataaaatta 23383359  T
Q  165 actttcccatggtgggaaaaaactctcctttc 196  Q
    ||||||||||||||||||| ||||||||||||    
T  23383358 actttcccatggtgggaaacaactctcctttc 23383327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 17648044 - 17648165
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    |||||||||||||||| ||||||||||||||||| |||||| ||||| ||||||||||| ||||||||| |||| || ||||||||||||| | || |||    
T  17648044 acatgaaagagagaggatggaagatagtgtaaaacaataatatagtg-ttgagagagtaagataagaatttatttcttatttaatctaatggatataatc 17648142  T
Q  164 aactttcccatggtgggaaaaaa 186  Q
    ||||||| ||| |||| ||||||    
T  17648143 aactttcacatagtggaaaaaaa 17648165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 36450871 - 36450742
Alignment:
Q  71 aagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaacttt 169  Q
    |||||||| ||||||||||||||||||| || |||||||||  |||||||||| |||||  || | || ||||||||||| |||| |||| |||||||||    
T  36450871 aagagagatggtggaagatagtgtaaaacaacaatctagtgtatgagagagtaggataaagatttgttactcatttaatccaatggacataatcaacttt 36450772  T
Q  170 cccatggtgggaaaaaactctcctttccca 199  Q
    |||||||||| ||| ||||| |||||||||    
T  36450771 cccatggtggaaaacaactcccctttccca 36450742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 64 - 214
Target Start/End: Original strand, 25970701 - 25970852
Alignment:
Q  64 aacatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgat 162  Q
    |||| |||||||||| ||||||||||||||||||| || |||||||||  |||||||||| |||||  || | || ||||||||||  |||| |||| ||    
T  25970701 aacaagaaagagagatggtggaagatagtgtaaaacaacaatctagtgtatgagagagtaggataaagatttgttactcatttaattcaatggacataat 25970800  T
Q  163 caactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||| |||||||||||| ||||| | ||||||| | |||||| |||||    
T  25970801 caactttctcatggtgggaaacaactcccttttcccatactaaatgccacct 25970852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 47377597 - 47377648
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 215  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  47377597 aactttcccatggtgggaaacaactcccctttcccaaattaaatggcacctc 47377648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 30808713 - 30808621
Alignment:
Q  121 tatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||| | | |||||||||||  ||   | |||||||||||||||||||| |||||||||||||||  ||||||| ||||    
T  30808713 tatgataagaatgtattcattacttaatctaatggtcaaatttaactttcccatggtgggaaacaactctcctttcccattttaaatgccacc 30808621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 208
Target Start/End: Complemental strand, 3847934 - 3847891
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatg 208  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  3847934 actttcccatggtgggaaaaaagtctcctttcccaaattaaatg 3847891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 47198653 - 47198603
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 215  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  47198653 actttcccatggtgggaaagaagtctcctttcccaaattaaatgtcacctc 47198603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 42544536 - 42544487
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  42544536 acttttccatggtgggaaaaaagtcttctttcccaaattaaatggcacct 42544487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 47376905 - 47376852
Alignment:
Q  160 gatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||| ||||    
T  47376905 gatcaactttcccatgatgggaaacaactcccctttcccaaattaaatgccacc 47376852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 213
Target Start/End: Original strand, 38014870 - 38014970
Alignment:
Q  113 tgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 212  Q
    |||||||||||||| | ||||| |||||||||| |||||| |  ||  |  | ||||||||||||||| |||||||  |||||||||||||||| |||||    
T  38014870 tgagagagtatgattaaaatgtgttcctcatttgatctaacggtcaaaaaaacctttcccatggtggggaaaaactagcctttcccaaattaaacggcac 38014969  T
Q  213 c 213  Q
    |    
T  38014970 c 38014970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 3848578 - 3848621
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatg 208  Q
    ||||||||||||||||||| || |||||||||||||||||||||    
T  3848578 actttcccatggtgggaaagaagtctcctttcccaaattaaatg 3848621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 11680325 - 11680283
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 206  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  11680325 aactttcccatggtgggaaaaaactaacctttcccaaattaaa 11680283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 11688604 - 11688562
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 206  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  11688604 aactttcccatggtgggaaaaaactaacctttcccaaattaaa 11688562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 25370553 - 25370511
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatg 208  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  25370553 ctttcccatggtgggaaaaaactagcctttcccaaattaaatg 25370511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 28684231 - 28684281
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||| |||||    
T  28684231 aactttcctatggtaggaaaaaagtctcctttcccaaattaaatgtcacct 28684281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 37275137 - 37275088
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||| |||||||||||| || ||||||||||||||||||| ||||||    
T  37275137 aactttctcatggtgggaaagaagtctcctttcccaaattaaacggcacc 37275088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 46765169 - 46765218
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 215  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  46765169 ctttcccatggtgggaaaaaactagtctttcccaaattaaatgccacctc 46765218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 52757861 - 52757812
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||| |||| ||||||||| ||| |||||||||||||||||||||||    
T  52757861 actttcctatggagggaaaaaagtcttctttcccaaattaaatggcacct 52757812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 5825459 - 5825393
Alignment:
Q  84 gaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatg 154  Q
    ||||||||||||||||||   |||||| ||||||||||| ||||| ||||| |||||||||| ||||||||    
T  5825459 gaagatagtgtaaaaaat---ctagtg-ttgagagagtaggataataatgtgttcctcatttgatctaatg 5825393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 25371545 - 25371593
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||| |||||||||||| || ||||||||||||||||||||| ||||    
T  25371545 actttctcatggtgggaaagaagtctcctttcccaaattaaatgtcacc 25371593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 12589388 - 12589286
Alignment:
Q  112 ttgagagagtatgataagaatgtattcctcatttaatctaatg-----aacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaa 206  Q
    ||||| |||||||||| |||||||||| |||||||||||||||     ||| ||     ||||||||| |||||||||||||   |||||||||||||||    
T  12589388 ttgagggagtatgatatgaatgtattcttcatttaatctaatggttgaaacttg-----ctttcccatagtgggaaaaaactaatctttcccaaattaaa 12589294  T
Q  207 tggcacct 214  Q
    || |||||    
T  12589293 tgtcacct 12589286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 55159228 - 55159177
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctcc 216  Q
    ||||||||||||| ||||| || ||||||||||||||||||||  |||||||    
T  55159228 actttcccatggtaggaaagaagtctcctttcccaaattaaataccacctcc 55159177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 10424385 - 10424419
Alignment:
Q  179 ggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||| |||||||||||||||||||||||||||||    
T  10424385 ggaaagaactctcctttcccaaattaaatggcacc 10424419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 12590202 - 12590244
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 206  Q
    |||||||||||||||| ||||||||  ||||||||||||||||    
T  12590202 aactttcccatggtggaaaaaaactagcctttcccaaattaaa 12590244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 21166171 - 21166137
Alignment:
Q  179 ggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||| |||||||||||||||||||||||||||||    
T  21166171 ggaaagaactctcctttcccaaattaaatggcacc 21166137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 23425206 - 23425256
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||| |||||||| |||||| | |||||| |||||    
T  23425206 aactttcccatggtgggaaacaactctccattcccatactaaatgccacct 23425256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 25655638 - 25655680
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 206  Q
    |||||||||||||||||||||||||   |||||||||||||||    
T  25655638 aactttcccatggtgggaaaaaactagtctttcccaaattaaa 25655680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 29650655 - 29650689
Alignment:
Q  179 ggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||| |||||||||||||||||||||||||||||    
T  29650655 ggaaagaactctcctttcccaaattaaatggcacc 29650689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 31836255 - 31836221
Alignment:
Q  179 ggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||| |||||||||||||||||||||||||||||    
T  31836255 ggaaagaactctcctttcccaaattaaatggcacc 31836221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 31910603 - 31910553
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||||||||||||||   ||||||| |||||||||| |||||    
T  31910603 aactttcccatggtgggaaaaaacaagcctttcctaaattaaatgacacct 31910553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 39522621 - 39522655
Alignment:
Q  18 acttgttagtgtaccattttcaaggatcaaacaaa 52  Q
    ||||||||| |||||||||||||||||||||||||    
T  39522621 acttgttagcgtaccattttcaaggatcaaacaaa 39522655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 45235767 - 45235733
Alignment:
Q  179 ggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||| |||||||||||||||||||||||||||||    
T  45235767 ggaaagaactctcctttcccaaattaaatggcacc 45235733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 30478357 - 30478308
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  30478357 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 30478308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 42545562 - 42545611
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||| ||| |||||||||| | | ||||||||||||||||||||||    
T  42545562 aactttcctatgatgggaaaaaagtgtactttcccaaattaaatggcacc 42545611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 47199395 - 47199444
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||| ||||||||||| || |||| |||||||||||||||| |||||    
T  47199395 actttcctatggtgggaaagaagtctcttttcccaaattaaatgccacct 47199444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 48013365 - 48013316
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  48013365 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 48013316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 55160067 - 55160115
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||| ||||||  ||||||||||||||||||||| |||||    
T  55160067 actttcccatggtgagaaaaag-tctcctttcccaaattaaatgccacct 55160115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 11681275 - 11681323
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||||||   |||| |||||||||||| |||||    
T  11681275 ctttcccatggtgggaaaaaactagtcttttccaaattaaatgccacct 11681323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 11689554 - 11689602
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||||||   |||| |||||||||||| |||||    
T  11689554 ctttcccatggtgggaaaaaactagtcttttccaaattaaatgccacct 11689602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 20822706 - 20822754
Alignment:
Q  82 tggaagatagtgtaaaaaataatctagtggttgagagagtatgataaga 130  Q
    ||||||||||||||||||||||| ||||| |  |||||||| |||||||    
T  20822706 tggaagatagtgtaaaaaataatatagtgttaaagagagtacgataaga 20822754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 23865321 - 23865365
Alignment:
Q  169 tcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||| || ||||||||| ||||||||| ||||||    
T  23865321 tcccatggtgggaaacaagtctcctttcacaaattaaacggcacc 23865365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 52758709 - 52758757
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 212  Q
    |||||||||||| || |||||||||  | ||||||||||||||||||||    
T  52758709 aactttcccatgatgagaaaaaactagcatttcccaaattaaatggcac 52758757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 1e-58; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 65 - 211
Target Start/End: Complemental strand, 3542963 - 3542816
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  3542963 acatgaaagagagagtgtgaaagatagtttaaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaacatgatc 3542864  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3542863 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 3542816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 33480519 - 33480676
Alignment:
Q  57 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatga 155  Q
    ||||| ||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||||     
T  33480519 gtgtgggaacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgg 33480618  T
Q  156 acatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33480619 acatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 33480676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 3542993 - 3543111
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3542993 aaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctt 3543092  T
Q  195 tcccaaattaaatggcacc 213  Q
    |||||||||||||||||||    
T  3543093 tcccaaattaaatggcacc 3543111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 15083217 - 15083366
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||  | ||||||    
T  15083217 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatagatatgatc 15083316  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  15083317 aactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 15083366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 22580084 - 22579935
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||||||| |||||||||||||||| |||| | ||||||||||||||||||| | ||||||    
T  22580084 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtgattgagagagtatgataggaatatgttcctcatttaatctaatggatatgatc 22579985  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  22579984 aactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 22579935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 33018316 - 33018167
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||||| |||||||||||||||||||| ||| | ||||||||||||||||||| ||||||||    
T  33018316 acatgaaagagagagtgtgaaagatagtataaaaaaataatctaatggttgagagagtatgataaaaatatgttcctcatttaatctaatggacatgatc 33018217  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  33018216 aactttccaatgatgggaaagaactctcctttcccaaattaaatggcacc 33018167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 65 - 211
Target Start/End: Complemental strand, 33479846 - 33479698
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa--taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgat 162  Q
    |||||||| |||||| ||| |||||||| |||||||  |||||||||||||||||||||||||||  ||| | ||||||||||||||||||| |||||||    
T  33479846 acatgaaatagagagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgat 33479747  T
Q  163 caactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 211  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33479746 caactttcccatggtgggaaataactctcctttcccaaattaaatggca 33479698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 15082546 - 15082402
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  15082546 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 15082447  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatg 208  Q
    |||||||||||| ||| ||| ||||||| ||||||||||||||||    
T  15082446 aactttcccatgatggaaaagaactctcatttcccaaattaaatg 15082402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 95 - 215
Target Start/End: Original strand, 33018346 - 33018466
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    |||||||||||||||||||||||||||||||||  ||| | ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  33018346 aaaaaataatctagtggttgagagagtatgatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctt 33018445  T
Q  195 tcccaaattaaatggcacctc 215  Q
    |||||||||||| | ||||||    
T  33018446 tcccaaattaaacgacacctc 33018466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 75 - 214
Target Start/End: Complemental strand, 7193474 - 7193337
Alignment:
Q  75 gagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttccca 173  Q
    ||||| ||| |||||||| ||||||| ||||||   ||||||||||||||||||||||| | ||||||||||||||||||| | ||||||||||||||||    
T  7193474 gagagtgtgaaagatagtataaaaaaataatct---ggttgagagagtatgataagaatatgttcctcatttaatctaatggagatgatcaactttccca 7193378  T
Q  174 tggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  7193377 tggtgggaaagaactctcctttcccaaattaaatggcacct 7193337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 69 - 209
Target Start/End: Original strand, 22587213 - 22587354
Alignment:
Q  69 gaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaact 167  Q
    ||||||||||| ||| |||||||| ||||| |||||||||||| ||||| |||||| |||  ||| | ||||||||||||||||||| ||||||||||||    
T  22587213 gaaagagagagtgtgaaagatagtataaaaaaataatctagtgattgagtgagtataatagaaatatgttcctcatttaatctaatggacatgatcaact 22587312  T
Q  168 ttcccatggtgggaaaaaactctcctttcccaaattaaatgg 209  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  22587313 ttcccatggtgggaaagaactctcctttcccaaattaaatgg 22587354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 95 - 214
Target Start/End: Original strand, 7193508 - 7193627
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    |||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||| | |||||||||||||||||| ||| ||| |||||| |||    
T  7193508 aaaaaataatctagtggttgagagagtatgatagaaatatattcctcatttaatctaatggatatgatcaactttcccatgatggaaaagaactctactt 7193607  T
Q  195 tcccaaattaaatggcacct 214  Q
    || |||||||||||||||||    
T  7193608 tctcaaattaaatggcacct 7193627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 22582420 - 22582523
Alignment:
Q  106 tagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaa 205  Q
    ||||| ||||| |||||| |||  ||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22582420 tagtgattgagtgagtataatagaaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaa 22582519  T
Q  206 atgg 209  Q
    ||||    
T  22582520 atgg 22582523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 24126021 - 24125972
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||||    
T  24126021 aactttcccatggtgggaaacaactcccctttcccaaattaaatgccacc 24125972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 24126713 - 24126766
Alignment:
Q  160 gatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||| ||||    
T  24126713 gatcaactttcccatgatgggaaacaactcccctttcccaaattaaatgccacc 24126766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 7159341 - 7159390
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||| |||||||||| | | |||||||||||||||||||||||    
T  7159341 actttcccatgatgggaaaaaagtttgctttcccaaattaaatggcacct 7159390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 7531877 - 7531829
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||| ||||| || ||||||||||||||||||||| ||||    
T  7531877 actttcccatggtaggaaagaagtctcctttcccaaattaaatgccacc 7531829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 10607448 - 10607406
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatg 208  Q
    |||||||||||||||||||||||   |||||||||||||||||    
T  10607448 ctttcccatggtgggaaaaaactagtctttcccaaattaaatg 10607406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 10608319 - 10608361
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaa 206  Q
    ||||||||||||||||||||||||   ||||||||||||||||    
T  10608319 aactttcccatggtgggaaaaaaccagcctttcccaaattaaa 10608361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 14337557 - 14337607
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 215  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||||    
T  14337557 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacctc 14337607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 15082638 - 15082672
Alignment:
Q  179 ggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||| |||||||||||||||||||||||||||||    
T  15082638 ggaaagaactctcctttcccaaattaaatggcacc 15082672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 22580631 - 22580597
Alignment:
Q  179 ggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||| |||||||||||||||||||||||||||||    
T  22580631 ggaaagaactctcctttcccaaattaaatggcacc 22580597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 22587117 - 22587083
Alignment:
Q  179 ggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||| |||||||||||||||||||||||||||||    
T  22587117 ggaaagaactctcctttcccaaattaaatggcacc 22587083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 33479938 - 33479972
Alignment:
Q  179 ggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||| |||||||||||||||||||||||||||||    
T  33479938 ggaaagaactctcctttcccaaattaaatggcacc 33479972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 1035351 - 1035452
Alignment:
Q  113 tgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 212  Q
    |||||||||||||| | ||||| || ||||||| |||||| |  ||  |  | |||||||||| |||||||||| |  ||||| ||||||||||||||||    
T  1035351 tgagagagtatgattaaaatgtgtttctcatttgatctaacggtcaaaaaaatctttcccatgatgggaaaaaattaaccttttccaaattaaatggcac 1035450  T
Q  213 ct 214  Q
    ||    
T  1035451 ct 1035452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 7532440 - 7532489
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||||  ||| || ||||||||||||||||||||| |||||    
T  7532440 actttcccatggtgaaaaagaagtctcctttcccaaattaaatgccacct 7532489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 4311163 - 4311211
Alignment:
Q  140 tcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaact 188  Q
    |||||| ||| |||| |||| ||||||| ||||||||||||||||||||    
T  4311163 tcatttgatccaatgcacataatcaactctcccatggtgggaaaaaact 4311211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 9574571 - 9574619
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||| ||||||||||| || ||||||||||||| ||||||| ||||    
T  9574571 actttcctatggtgggaaagaagtctcctttcccaagttaaatgccacc 9574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 199
Target Start/End: Original strand, 25067796 - 25067884
Alignment:
Q  111 gttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttccca 199  Q
    ||||||||| ||| |||||| |||||| || |||| ||| |||| |||  | ||||||||| ||||||||||| || | ||||||||||    
T  25067796 gttgagagactataataagattgtatttcttatttgatccaatggacaaaaacaactttcctatggtgggaaacaaatatcctttccca 25067884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 110; Significance: 4e-55; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 65 - 215
Target Start/End: Original strand, 58 - 210
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa--aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgat 162  Q
    ||||||||||||||| ||| |||||||| |||||  ||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||| ||    
T  58 acatgaaagagagagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaacataat 157  T
Q  163 caactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 215  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  158 caactttcccatggtgggaaagaactctcctttcccaaattaaatggcacctc 210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 1e-52; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 21471853 - 21472002
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| | ||||||    
T  21471853 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggatatgatc 21471952  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21471953 aactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 21472002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 21471166 - 21471016
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||||||||| ||||||||||||||| |||| | ||| ||||||||||||||| ||||||||    
T  21471166 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggctgagagagtatgataggaatatgttcttcatttaatctaatggacatgatc 21471067  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21471066 aactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 21471016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 65 - 215
Target Start/End: Complemental strand, 38834536 - 38834385
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||||||| ||||||||    
T  38834536 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataaaaatatgttcctcatttaatctaatggacatgatc 38834437  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 215  Q
    ||||||||| ||||||||||  || |||||||||||||||||||||||||||    
T  38834436 aactttcccgtggtgggaaagtaccctcctttcccaaattaaatggcacctc 38834385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 95 - 214
Target Start/End: Complemental strand, 37548116 - 37547997
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  37548116 aaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctt 37548017  T
Q  195 tcccaaattaaatggcacct 214  Q
    ||||||||||||||||||||    
T  37548016 tcccaaattaaatggcacct 37547997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 99 - 213
Target Start/End: Complemental strand, 14573374 - 14573261
Alignment:
Q  99 aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttccc 198  Q
    |||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14573374 aataatctagtg-ttgagagagtatgataaaaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttccc 14573276  T
Q  199 aaattaaatggcacc 213  Q
    |||||||||||||||    
T  14573275 aaattaaatggcacc 14573261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 4479603 - 4479750
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatca 164  Q
    |||||||||||||| | || |||||| | ||||||||||| ||||| | ||||||||||||||||||| | ||||||||||||||||||| ||||||| |    
T  4479603 acatgaaagagagatgatgaaagataatataaaaaataatttagtg-tggagagagtatgataagaatatgttcctcatttaatctaatggacatgatta 4479701  T
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
T  4479702 actttcccatggtgagaaagaactctcctttcccaaattaaatggcacc 4479750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 95 - 214
Target Start/End: Original strand, 38834566 - 38834685
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    |||||||||||||||||||||||||||||||||  ||| | ||| ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  38834566 aaaaaataatctagtggttgagagagtatgatagaaatatgttcttcatttaatctaatggacatgatcaactttcccacggtaggaaaaaactctcctt 38834665  T
Q  195 tcccaaattaaatggcacct 214  Q
    ||||||||||||||||||||    
T  38834666 tcccaaattaaatggcacct 38834685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 13134436 - 13134318
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    ||||||||||||||||||||| |||||||||||  ||| | ||||||||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||    
T  13134436 aaaaaataatctagtggttgatagagtatgatagaaatatgttcctcatttaatttaatggacatgatcaactttcctatggtgggaaagaactctcctt 13134337  T
Q  195 tcccaaattaaatggcacc 213  Q
    |||||||||||||||||||    
T  13134336 tcccaaattaaatggcacc 13134318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 96 - 214
Target Start/End: Original strand, 14573930 - 14574048
Alignment:
Q  96 aaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctccttt 195  Q
    ||||| |||||||||||||||||||||||||| |||| | || |||||||||||||||| | |||||||||||||  ||||||||||| |||||||||||    
T  14573930 aaaaacaatctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggatatgatcaactttcttatggtgggaaagaactctccttt 14574029  T
Q  196 cccaaattaaatggcacct 214  Q
    |||||||||||||||||||    
T  14574030 cccaaattaaatggcacct 14574048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 33433160 - 33433208
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  33433160 actttcccatggtgggaaagaactctcctttctcaaattaaacggcacc 33433208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 30486909 - 30486964
Alignment:
Q  133 gtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaact 188  Q
    |||||| |||||| ||| |||| |||| ||||||||||||||||||||||||||||    
T  30486909 gtattcttcatttgatccaatgcacataatcaactttcccatggtgggaaaaaact 30486964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 5276513 - 5276463
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 215  Q
    ||||||||||||||||||| || ||||||||||||| ||||||| ||||||    
T  5276513 actttcccatggtgggaaagaagtctcctttcccaagttaaatgccacctc 5276463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 1164788 - 1164825
Alignment:
Q  177 tgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  1164788 tgggaaagaactctcctttcccaaattaaatggcacct 1164825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 16426602 - 16426553
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||| |||||||||||||||||   |||||||||||||||||||||||    
T  16426602 aacttttccatggtgggaaaaaacaagcctttcccaaattaaatggcacc 16426553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 40992271 - 40992222
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||| |||||||||   |||||||||||||||||||||||    
T  40992271 aactttcccatggtaggaaaaaacaaacctttcccaaattaaatggcacc 40992222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 41984774 - 41984726
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||| |||||||||  |||||||||||||||||| |||||    
T  41984774 ctttcccatggtgagaaaaaactagcctttcccaaattaaatgccacct 41984726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 2650278 - 2650227
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 215  Q
    |||||| ||||| |||||||||| |||| |||||||||||||| ||||||||    
T  2650278 aacttttccatgatgggaaaaaagtctcatttcccaaattaaacggcacctc 2650227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 4478990 - 4478936
Alignment:
Q  73 gagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataa 128  Q
    |||||||| || |||||||| |||||||||||||||| || |||||||||||||||    
T  4478990 gagagaggatgaaagatagtataaaaaataatctagt-gtggagagagtatgataa 4478936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 11256696 - 11256766
Alignment:
Q  82 tggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaat 153  Q
    ||||||||||||| || || |||||||| |||||||||| ||| ||||||| ||||| ||| ||||||||||    
T  11256696 tggaagatagtgtgaagaaaaatctagt-gttgagagagcatgttaagaatatattcttcacttaatctaat 11256766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 24727870 - 24727820
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||| ||||| |||||||||| | | |||||||||||||||||||||||    
T  24727870 aacttttccatgatgggaaaaaagtgtgctttcccaaattaaatggcacct 24727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 24741811 - 24741853
Alignment:
Q  171 ccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||    
T  24741811 ccatggtgggaaaaaagtcttctttcccaaattaaacggcacc 24741853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 30545434 - 30545484
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||  ||||||| ||||  ||||||||||||||||||||||||    
T  30545434 aactttcccatcatgggaaacaacttccctttcccaaattaaatggcacct 30545484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 4478899 - 4478850
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  4478899 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 4478850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 19521917 - 19521966
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||| ||||||| || | | |||||||||||||||||||||||    
T  19521917 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacct 19521966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 41043329 - 41043378
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 215  Q
    |||| ||||| ||||||||||||  |||||||||||||||||| ||||||    
T  41043329 cttttccatgatgggaaaaaactagcctttcccaaattaaatgccacctc 41043378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 30544779 - 30544727
Alignment:
Q  161 atcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||  ||||||| ||||  | |||||||||||||||||||||    
T  30544779 atcaactttcccatcatgggaaacaacttccatttcccaaattaaatggcacc 30544727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 1e-52; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 43737878 - 43737729
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    |||| |||||||||  ||| |||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||    
T  43737878 acatcaaagagagaatgtgaaagatagtgtaaaaaaataatctagtggttgagagagtatgataaaaatatattcctcatttaatctaatggacatgatc 43737779  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  43737778 aactttcccatggtgggaaataactctactttcccaaattaaatggcacc 43737729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 16270357 - 16270207
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa--taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgat 162  Q
    ||||||||||| ||| ||| |||||||| |||||||  ||||||||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||    
T  16270357 acatgaaagagggagtgtgaaagatagtataaaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgat 16270258  T
Q  163 caactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16270257 caactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 16270207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 23440795 - 23440913
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  23440795 aaaaaataatctagtggttgagagagtatgataggaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctt 23440894  T
Q  195 tcccaaattaaatggcacc 213  Q
    |||||||||||||||||||    
T  23440895 tcccaaattaaatggcacc 23440913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 67 - 214
Target Start/End: Original strand, 48972346 - 48972494
Alignment:
Q  67 atgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaa 165  Q
    ||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||| |||| | || |||||||||||||||| ||||||||||    
T  48972346 atgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggacatgatcaa 48972445  T
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  48972446 cttttccatggtgggaaagaactctcctttcccaaattaaatggcacct 48972494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 9948144 - 9947995
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  9948144 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatgaatatgatc 9948045  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||| ||||||||||||| |||| | ||||||||||||||||||||||    
T  9948044 aacttttccatggtgggaaagaacttttctttcccaaattaaatggcacc 9947995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 9948807 - 9948935
Alignment:
Q  85 aagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaa 184  Q
    |||||||| |||||||||||||||||||||| ||||||||||| |||| | ||||||||||||||||||| ||||||||||||||||||||||||||||     
T  9948807 aagatagtataaaaaataatctagtggttgatagagtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaag 9948906  T
Q  185 aactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||| |||||||||||||||    
T  9948907 aactctcctttcctaaattaaatggcacc 9948935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 23440765 - 23440617
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatca 164  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||| |||| | || |||||||||||||||| |||| ||||    
T  23440765 acatgaaagagagagtgtgaaagatagtataaaaaataatctagtggttgagagagtatgataggaatatgtttctcatttaatctaatggacataatca 23440666  T
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||| |||| || ||||| |||||||||||||||||||||||||||||    
T  23440665 acttttccatagttggaaagaactctcctttcccaaattaaatggcacc 23440617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 65 - 214
Target Start/End: Complemental strand, 51974586 - 51974436
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||  ||| |||||||| ||||||| ||||||||| ||||||||||||||||| |||| | ||| ||||||||||||||  ||||||||    
T  51974586 acatgaaagagagaatgtgaaagatagtataaaaaaataatctagtagttgagagagtatgataggaatatgttcttcatttaatctaatagacatgatc 51974487  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  51974486 aactttcccatggtgggaaagaactctcctttcccaaattaaatggcacct 51974436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 16271047 - 16271196
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| || ||||| ||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||    
T  16271047 acatgaaagagagagtgtgaaatatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttcctcatttaatctaatggacatgatc 16271146  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||| || |||| ||||||||||||| |||||||||||||||    
T  16271147 aactttcccatgatgagaaagaactctcctttcctaaattaaatggcacc 16271196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 57 - 199
Target Start/End: Complemental strand, 6076127 - 6075988
Alignment:
Q  57 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaa 156  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||||||| |    
T  6076127 gtgtgagaacatgaaagagagag--tggaagatagtgtaaaaaataatttagtg-ttgagagactatgataaaaatgtattcctcatttaatctaatgga 6076031  T
Q  157 catgatcaactttcccatggtgggaaaaaactctcctttccca 199  Q
    |||||||||||||| |||||| | ||| |||||||||||||||    
T  6076030 catgatcaactttctcatggtagaaaagaactctcctttccca 6075988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 95 - 214
Target Start/End: Original strand, 43737908 - 43738027
Alignment:
Q  95 aaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctt 194  Q
    ||||||||||||||||||||||||| ||||||| |||| | ||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  43737908 aaaaaataatctagtggttgagagaatatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctt 43738007  T
Q  195 tcccaaattaaatggcacct 214  Q
    ||||||||||||||||||||    
T  43738008 tcccaaattaaatggcacct 43738027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 48971862 - 48971705
Alignment:
Q  57 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatga 155  Q
    ||||| ||||||||||||||||| ||| |||||||| ||||||| |||| |||||||||||||||||||||| |||| | ||||||||||||||||||      
T  48971862 gtgtgggaacatgaaagagagagtgtgaaagatagtataaaaaaataatatagtggttgagagagtatgataggaatatgttcctcatttaatctaattt 48971763  T
Q  156 acatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    | ||||||||||||| ||| |||||||| |||||||||||||||||||||||| ||||    
T  48971762 atatgatcaactttctcattgtgggaaagaactctcctttcccaaattaaatgacacc 48971705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 51975126 - 51975275
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    ||||||||||||||| ||| |||||||| ||||| ||||||||||||||| ||||||||||||| |||| | ||||||||||||||||||  ||||||||    
T  51975126 acatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttaagagagtatgataggaatatgttcctcatttaatctaattgacatgatc 51975225  T
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||| |||  ||| |||||||||||||||||||||||||||||    
T  51975226 aactttcccatagtgaaaaagaactctcctttcccaaattaaatggcacc 51975275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 193997 - 193850
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatca 164  Q
    |||||||||||||| | || |||||| | ||||||||||||||||| | ||||||||||||||||||| | ||||||||||||| ||||| ||||||| |    
T  193997 acatgaaagagagatgatgaaagataatataaaaaataatctagtg-tggagagagtatgataagaatatgttcctcatttaatttaatggacatgatta 193899  T
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||    
T  193898 actttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 193850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 67 - 213
Target Start/End: Original strand, 50826992 - 50827138
Alignment:
Q  67 atgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaa 165  Q
    ||||||||||||| ||| |||||| | ||||||| |||| ||||||||||||||||||||||| ||| | || |||||||||||||||| ||||||||||    
T  50826992 atgaaagagagagtgtgaaagatactataaaaaaataatttagtggttgagagagtatgataaaaatatgtttctcatttaatctaatggacatgatcaa 50827091  T
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  50827092 ctttcccatggtggg-aaaaactctcctttctcaaattaaatggcacc 50827138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 38930469 - 38930312
Alignment:
Q  57 gtgtgagaacatgaaagagagagggtggaagatagtgtaaaaaa-taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatga 155  Q
    ||||| ||||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||||||||| |||| | ||||| ||||||| |||||     
T  38930469 gtgtgggaacatgaaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataggaatatgttccttatttaatttaatgg 38930370  T
Q  156 acatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    | |||||||||||||||||||||  ||| |||| ||||||||||||||||||| ||||    
T  38930369 atatgatcaactttcccatggtgaaaaagaactttcctttcccaaattaaatgacacc 38930312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 65 - 189
Target Start/End: Complemental strand, 12926020 - 12925897
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatca 164  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||  ||||||||||||||| |||||||||||||| |||| ||||    
T  12926020 acatgaaagagagagggtggaagatagtgtaaaaaataatctaatg-ttgagagagtagtataagaatgtattccacatttaatctaatggacattatca 12925922  T
Q  165 actttcccatggtgggaaaaaactc 189  Q
    ||||| | ||||||| |||||||||    
T  12925921 acttttctatggtggaaaaaaactc 12925897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 65 - 199
Target Start/End: Original strand, 6076767 - 6076901
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatca 164  Q
    ||||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||| |||| | || |||||||||| ||||| |||||||||    
T  6076767 acatgaaagagagagtgtgaaagatagtataaaaaataatctattggttgagagagtatgataggaatatgttactcatttaatataatggacatgatca 6076866  T
Q  165 actttcccatggtgggaaaaaactctcctttccca 199  Q
    ||||| |||| |||||||| ||||||| |||||||    
T  6076867 acttttccatagtgggaaagaactctcatttccca 6076901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 65 - 189
Target Start/End: Complemental strand, 20794436 - 20794313
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatca 164  Q
    |||||||||||||||||||||| |||||||||||||||||||| || ||||||||||   |||||||||| |||| |||||||||||||| |||| ||||    
T  20794436 acatgaaagagagagggtggaaaatagtgtaaaaaataatctaatg-ttgagagagtgatataagaatgtgttccacatttaatctaatgcacattatca 20794338  T
Q  165 actttcccatggtgggaaaaaactc 189  Q
    ||||||| ||||||| |||||||||    
T  20794337 actttcctatggtggaaaaaaactc 20794313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 65 - 195
Target Start/End: Complemental strand, 47334347 - 47334217
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatc 163  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||| |||||| || | || |||||||||||||||| |||| |||    
T  47334347 acatgaaagagagatggtggaagatagtgtaaaacaataatctagtg-ttgagagagtaggataaggatttgtttctcatttaatctaatggacataatc 47334249  T
Q  164 aactttcccatggtgggaaaaaactctccttt 195  Q
    ||||||||||| |||||||| ||||| |||||    
T  47334248 aactttcccattgtgggaaacaactccccttt 47334217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 65 - 178
Target Start/End: Complemental strand, 17050600 - 17050488
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatca 164  Q
    ||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||  |||||||||| | ||  |||||||||||||||||| ||||    
T  17050600 acatgaaagagagagggtggaagatagtgtaaaaaataatctaat-attgagagagtagtataagaatgtgtaccatatttaatctaatgaacattatca 17050502  T
Q  165 actttcccatggtg 178  Q
    ||||||||||||||    
T  17050501 actttcccatggtg 17050488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 65 - 189
Target Start/End: Original strand, 31390726 - 31390847
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatca 164  Q
    |||||||||||||||  || ||||||||||||||||||||||| || ||||||||||| ||||| ||||| ||||||||||| || |||| |||| ||||    
T  31390726 acatgaaagagagag--tgaaagatagtgtaaaaaataatctaatg-ttgagagagtaggataaaaatgtgttcctcatttattccaatggacataatca 31390822  T
Q  165 actttcccatggtgggaaaaaactc 189  Q
    ||||||||||||||||||| |||||    
T  31390823 actttcccatggtgggaaagaactc 31390847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 65 - 211
Target Start/End: Original strand, 38931145 - 38931293
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaa--taatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgat 162  Q
    ||||||||||||||| ||| |||||| | |||||||  |||| ||||||||||||||||||||||  ||| | || || ||||||| ||||| | |||||    
T  38931145 acatgaaagagagagtgtgaaagataatataaaaaaaataatatagtggttgagagagtatgatagaaatatgtttcttatttaatttaatggatatgat 38931244  T
Q  163 caactttcccatggtgggaaaaaactctcctttcccaaattaaatggca 211  Q
    ||||||||||||||| | ||| |||||| ||||||||||||||||||||    
T  38931245 caactttcccatggtagaaaagaactcttctttcccaaattaaatggca 38931293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 64 - 213
Target Start/End: Original strand, 47334798 - 47334948
Alignment:
Q  64 aacatgaaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgat 162  Q
    |||| |||||||||| ||||||||||||||||||| ||  || |||||  |||||||||| |||||  || | || ||||||||||| |||| |||| ||    
T  47334798 aacaagaaagagagatggtggaagatagtgtaaaacaacgatatagtgtatgagagagtaggataaagatttgttactcatttaatccaatggacataat 47334897  T
Q  163 caactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||| ||||||||||| ||||| | ||||||| | |||||| ||||    
T  47334898 caactttcctatggtgggaaacaactcccttttcccatactaaatgccacc 47334948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 27888765 - 27888701
Alignment:
Q  119 agtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaa 183  Q
    ||||||||| |||| | ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27888765 agtatgataggaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaa 27888701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 1012596 - 1012546
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  1012596 aactttcccatggtgggaaaaaaatctcctttcccaaattaaacggcacct 1012546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 40649516 - 40649580
Alignment:
Q  114 gagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtg 178  Q
    |||||||||  |||||||||| |||| |||||||||||||| |||| ||||||||||||||||||    
T  40649516 gagagagtagtataagaatgtgttccacatttaatctaatggacattatcaactttcccatggtg 40649580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 51987875 - 51987826
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  51987875 actttcccatggtgggaaagaagtctcctttcccaaattaaatgccacct 51987826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 186
Target Start/End: Complemental strand, 46133807 - 46133720
Alignment:
Q  98 aaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaa 186  Q
    |||||||||| || |||||||||||  ||||||||||  |||||||||||||| ||| |||| ||  |||||||||||||||| |||||    
T  46133807 aaataatctaatg-ttgagagagtagtataagaatgtgctcctcatttaatctgatggacataattcactttcccatggtggggaaaaa 46133720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 27418311 - 27418222
Alignment:
Q  65 acatgaaagagagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatg 154  Q
    ||||||||||||||   |||||||||||||| |||||||| ||||| | |||||||||| | |||| |||  || |||||| ||||||||    
T  27418311 acatgaaagagagattatggaagatagtgtataaaataatatagtgttcgagagagtataacaagagtgtgctcttcatttgatctaatg 27418222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 35616775 - 35616824
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||||||||| || ||||||||||||| ||||||| |||||    
T  35616775 actttcccatggtgggaaagaagtctcctttcccaagttaaatgccacct 35616824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 45064734 - 45064685
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||| ||||||||||||   |||||||||||||||||||||||    
T  45064734 actttcccatgatgggaaaaaactaatctttcccaaattaaatggcacct 45064685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 49611562 - 49611607
Alignment:
Q  167 tttcccatggtgggaaaaaactctcctttcccaaattaaatggcac 212  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||||    
T  49611562 tttcccatgatgggaaaaaactagcctttcccaaattaaatggcac 49611607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 8560887 - 8560839
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||| ||||||| || ||||||||||||||||||||| ||||    
T  8560887 actttcccatgatgggaaagaagtctcctttcccaaattaaatgtcacc 8560839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 49610754 - 49610706
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    |||||||||||| ||||||||| ||| ||||||||||| ||||||||||    
T  49610754 actttcccatggagggaaaaaagtcttctttcccaaataaaatggcacc 49610706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 531
Target Start/End: Original strand, 51164776 - 51164832
Alignment:
Q  475 tttatgcagctcaatcctatcttcccaaccgtttcattactgctaatatcaattaca 531  Q
    |||||||||||||||||||| |||| ||| ||| ||||||||| || ||||||||||    
T  51164776 tttatgcagctcaatcctattttcctaactgttccattactgccaacatcaattaca 51164832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 51988464 - 51988512
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  51988464 actttcccatggtggaaaagaagtctcctttcccaaattaaatgccacc 51988512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 7219138 - 7219068
Alignment:
Q  82 tggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaat 153  Q
    ||||||||||||| || || ||||||||| |||||| || ||| ||||||| ||||| ||||||||||||||    
T  7219138 tggaagatagtgtgaagaaaaatctagtg-ttgagaaagcatgttaagaatatattcttcatttaatctaat 7219068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 51247958 - 51247888
Alignment:
Q  82 tggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaat 153  Q
    ||||||||||||| || || |||||||| |||||||||| ||| ||||||| ||||| ||| ||||||||||    
T  51247958 tggaagatagtgtgaagaaaaatctagt-gttgagagagcatgttaagaatatattcttcacttaatctaat 51247888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 51248439 - 51248509
Alignment:
Q  82 tggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaat 153  Q
    ||||||||||||| || || ||||||||| ||||||||||||| ||||||| | ||| ||| ||||||||||    
T  51248439 tggaagatagtgtgaagaaaaatctagtg-ttgagagagtatgttaagaatatgttcttcacttaatctaat 51248509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 1013471 - 1013521
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||||||||| ||| |||  ||||||||||||||||||| |||||    
T  1013471 aactttcccatggtggaaaataacattcctttcccaaattaaatgacacct 1013521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 6076670 - 6076636
Alignment:
Q  18 acttgttagtgtaccattttcaaggatcaaacaaa 52  Q
    |||||||| ||||||||||||||||||||||||||    
T  6076670 acttgttaatgtaccattttcaaggatcaaacaaa 6076636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 16270935 - 16270901
Alignment:
Q  179 ggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||| |||||||||||||||||||||||||||||    
T  16270935 ggaaagaactctcctttcccaaattaaatggcacc 16270901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 38930574 - 38930608
Alignment:
Q  179 ggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||| |||||||||||||||||||||||||||||    
T  38930574 ggaaagaactctcctttcccaaattaaatggcacc 38930608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 45065385 - 45065435
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||||||||||||||   | ||| ||||||||||||||||||    
T  45065385 aactttcccatggtgggaaaaaacaagctttttccaaattaaatggcacct 45065435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 165 - 207
Target Start/End: Original strand, 48870753 - 48870795
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaat 207  Q
    |||||||||||||||||||||| |||| |||||||| ||||||    
T  48870753 actttcccatggtgggaaaaaagtctcatttcccaagttaaat 48870795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 155
Target Start/End: Complemental strand, 37725509 - 37725437
Alignment:
Q  82 tggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatga 155  Q
    ||||| ||||||| || || ||||||||| ||||||||||||| ||||||| | ||| ||| ||||||||||||    
T  37725509 tggaaaatagtgtgaagaaaaatctagtg-ttgagagagtatgttaagaatatgttcttcacttaatctaatga 37725437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 194701 - 194749
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||||    
T  194701 actttcccatgatgggaaagaagtttgctttcccaaattaaatggcacc 194749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 8561737 - 8561785
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    |||||||||| ||||||||||||   ||||||||||||||||| |||||    
T  8561737 ctttcccatgatgggaaaaaactagtctttcccaaattaaatgtcacct 8561785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 11032176 - 11032268
Alignment:
Q  122 atgataagaatgtattcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacct 214  Q
    ||||||||||||| ||| | | |||||||||||  ||   ||||||||||||||||||||||  | || |||||||||  ||||||| |||||    
T  11032176 atgataagaatgtgttcattacttaatctaatggtcaaattcaactttcccatggtgggaaactattcccctttcccatgttaaatgccacct 11032268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 14924721 - 14924681
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 206  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  14924721 ctttcccatggtgggaaacaacttccctttcccaaattaaa 14924681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 14925343 - 14925383
Alignment:
Q  166 ctttcccatggtgggaaaaaactctcctttcccaaattaaa 206  Q
    |||||||||||||||||| |||| ||||| |||||||||||    
T  14925343 ctttcccatggtgggaaacaactttccttccccaaattaaa 14925383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 37874112 - 37874064
Alignment:
Q  165 actttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||||||| || |||| |||||||| ||||||| ||||    
T  37874112 actttcccatggtgggaaagaagtctcatttcccaagttaaatgtcacc 37874064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 48869815 - 48869767
Alignment:
Q  167 tttcccatggtgggaaaaaactctcctttcccaaattaaatggcacctc 215  Q
    ||||||||||||| ||| || ||||||||||||| ||||||| ||||||    
T  48869815 tttcccatggtggaaaagaagtctcctttcccaagttaaatgtcacctc 48869767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 70 - 213
Target Start/End: Original strand, 9162 - 9306
Alignment:
Q  70 aaagagagagggtggaagatagtgtaaaa-aataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactt 168  Q
    |||||||||| ||| |||||||| ||||| |||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||||| |||||    
T  9162 aaagagagagtgtgaaagatagtataaaaaaataatctagtggttgagagagtatgataagaatatgttcatcatttaatctaatggacatgatgaactt 9261  T
Q  169 tcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    | ||||||||  ||||||||||||||| |||||||||||| ||||    
T  9262 ttccatggtgaaaaaaaactctccttttccaaattaaatgacacc 9306  T

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Target: scaffold0700 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 74 - 188
Target Start/End: Complemental strand, 5457 - 5344
Alignment:
Q  74 agagagggtggaagatagtgtaaaaaataatctagtggttgagagagtatgataagaatgtattcctcatttaatctaatgaacatgatcaactttccca 173  Q
    |||||| ||||||||||   ||||||||||||||||  | || |||||| ||||||||||| || |||||||||||||||| | || ||| ||||||| |    
T  5457 agagagtgtggaagatatcataaaaaataatctagta-tggaaagagtaggataagaatgtgtttctcatttaatctaatggatataatctactttccta 5359  T
Q  174 tggtgggaaaaaact 188  Q
    | |||||| ||||||    
T  5358 tagtgggagaaaact 5344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 17388 - 17339
Alignment:
Q  164 aactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 213  Q
    ||||||||||||||||||||||||   ||||| |||||||||||||||||    
T  17388 aactttcccatggtgggaaaaaacaagccttttccaaattaaatggcacc 17339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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