View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9623_low_14 (Length: 493)
Name: NF9623_low_14
Description: NF9623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9623_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 454; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 1 - 477
Target Start/End: Original strand, 36970347 - 36970824
Alignment:
| Q |
1 |
agcagaaactcaatagcttggcaggacattggaattgcagtttcaagtatttttggagcgggatatgggtgttctacaatgtaatgtccatgcatcgaga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
36970347 |
agcagaaactcaatagcttggcaggacattggaattgcagtttcaagtatttttggagcgggatatgggtgttctacaatgtaatgtccatgcatcaaga |
36970446 |
T |
|
| Q |
101 |
atctttgtcttgcaattttttctctcgatataactaatatctctttgaatattaattttttcttattttgcttcttcaggattggcccaatggagtctaa |
200 |
Q |
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| T |
36970447 |
atctttgtcttgcaattttttctctcgatataactaatatctctttgaatattaattttttcttattttgcttcttcaggattggcccaatggagtctaa |
36970546 |
T |
|
| Q |
201 |
gataaagccaaaaagggtttatcgaagaaggagtgtgaaacccactcaattggcacggccagaagaggtaaaacttctatgaatatggagttttttctag |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
36970547 |
gataaagccaaaaagggtttatcgaagaaggagtgtgaagcccactcaattggcacggccagcagaggtaaaacttctatgaatatggagttttttctag |
36970646 |
T |
|
| Q |
301 |
gaaacagatttaaggcagtatataaaagtatccataggatgttttgagctatagtgattaaataatgcatcctagaatgttttcaattttcaactaatct |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36970647 |
gaaacagatttaaggcagtatataaaagtatccataggatgttttgagctatagtgattaaataatgcatcctagaatgttttcaattttcaactaatct |
36970746 |
T |
|
| Q |
401 |
ctagcagtcagtttatcacccatttatttgtcgtagggcc-aagtctagaatgcaattagtacattgctgctgagaat |
477 |
Q |
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|| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
36970747 |
ctggcagtcagtttatcacccatttatttgtcgtagggcctaagtctagaatgcaattagtacattgctgctgagaat |
36970824 |
T |
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