View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9623_low_72 (Length: 238)
Name: NF9623_low_72
Description: NF9623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9623_low_72 |
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Alignment Details
Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 70 - 224
Target Start/End: Original strand, 9222448 - 9222602
Alignment:
| Q |
70 |
gttatcttaatctcaaattaattttctgttttatttaattaacccattcattacgttaattgcataactccttataaattataatccctatccatccaaa |
169 |
Q |
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| T |
9222448 |
gttatcttaatctcaaattaattttctgttttatttaattaacccattcattacgttaattgcataactccttataaattataatccctatccatccaaa |
9222547 |
T |
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| Q |
170 |
tccaccatcacaatcataatcatcacgattcgattcacaatcacacctttttctt |
224 |
Q |
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| T |
9222548 |
tccaccatcacaatcataatcatcacgattcgattcacaatcacacctttttctt |
9222602 |
T |
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