View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9623_low_73 (Length: 237)
Name: NF9623_low_73
Description: NF9623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9623_low_73 |
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Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 17 - 222
Target Start/End: Original strand, 25982361 - 25982566
Alignment:
| Q |
17 |
atacctgagagttaagagttccaaatcatattgtgccattcaaaaactctagtattgcatcaattccagttcagttgtattgtggtttgattaattaatt |
116 |
Q |
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| T |
25982361 |
atacctgagagttaagagttccaaatcatattgtgccattcaaaaactctagtattgcatcaattccagttcagttgtattgtggtttgattaattaatt |
25982460 |
T |
|
| Q |
117 |
cgattagagttttatatttgattaagattttgactaaaacttttgttattttcaagctatcccaacttttctgcttaacaacgaagcgtttaaatctatg |
216 |
Q |
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| T |
25982461 |
caattacagttttatagttgattaagattttgactaaaacttttgttattttcaagctatcccaacttttctgcttaacaacgaagcgtttaaatctatg |
25982560 |
T |
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| Q |
217 |
taacac |
222 |
Q |
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|||||| |
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| T |
25982561 |
taacac |
25982566 |
T |
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