View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9624_low_11 (Length: 284)
Name: NF9624_low_11
Description: NF9624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9624_low_11 |
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Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 798422 - 798695
Alignment:
| Q |
1 |
tatatacatgttctctctggttcgttgggaaaagaaggcttgcttagaaaattttacataacagaacataaactttgtttaacaagcgaaaatcaatcta |
100 |
Q |
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| T |
798422 |
tatatacatgttctctctggttccttgggaaaagaaggcttgcttagaaaattttacagaacagaacataagctttgtttaacaagcgaaaatcaatcta |
798521 |
T |
|
| Q |
101 |
atttgacgcattccccatcaacgccatcattttgataaaaaataatttgtgactttcctcgtacaggttctctctaattcagccataaatctagatccag |
200 |
Q |
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| T |
798522 |
atttgacgcattccccatcaacgccatcattttgataaaaaatgatttatgattttcctcgtacaggttctctctaattcagccataaatccagatccaa |
798621 |
T |
|
| Q |
201 |
tcataaatctataaacaaactcgtaatacatgtcctctctcattcttaactttaacagcatctaatcccaacac |
274 |
Q |
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||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| |
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| T |
798622 |
tcataaatctataaacagactcgtaatacatgttctctctcattcttaactttaacaacatccaatcccaacac |
798695 |
T |
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