View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9625_low_6 (Length: 426)

Name: NF9625_low_6
Description: NF9625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9625_low_6
NF9625_low_6
[»] chr3 (81 HSPs)
chr3 (1-192)||(1648358-1648548)
chr3 (211-346)||(10254569-10254702)
chr3 (211-347)||(4072311-4072445)
chr3 (211-347)||(3970529-3970662)
chr3 (211-347)||(21969195-21969328)
chr3 (211-347)||(21991631-21991764)
chr3 (211-347)||(404044-404178)
chr3 (211-343)||(8831744-8831874)
chr3 (211-348)||(13078201-13078335)
chr3 (211-347)||(25446251-25446383)
chr3 (211-347)||(12789606-12789739)
chr3 (211-347)||(45487799-45487932)
chr3 (234-346)||(10017115-10017226)
chr3 (232-346)||(5529892-5530006)
chr3 (234-347)||(36657492-36657604)
chr3 (211-347)||(32237432-32237565)
chr3 (211-347)||(36822798-36822931)
chr3 (243-346)||(10117516-10117619)
chr3 (215-349)||(55340335-55340467)
chr3 (211-345)||(12838079-12838210)
chr3 (214-347)||(25488382-25488512)
chr3 (214-347)||(25561011-25561141)
chr3 (215-344)||(45712945-45713071)
chr3 (211-318)||(22101193-22101298)
chr3 (211-347)||(26906454-26906587)
chr3 (211-347)||(36278794-36278927)
chr3 (215-345)||(43639123-43639251)
chr3 (352-411)||(1648539-1648598)
chr3 (234-347)||(10441317-10441429)
chr3 (211-318)||(22176137-22176242)
chr3 (211-347)||(44920684-44920816)
chr3 (211-347)||(39850382-39850516)
chr3 (215-348)||(43150479-43150609)
chr3 (211-348)||(50099431-50099567)
chr3 (294-347)||(26977808-26977861)
chr3 (290-347)||(36657433-36657490)
chr3 (211-343)||(1476589-1476718)
chr3 (211-347)||(13724026-13724159)
chr3 (241-347)||(36329246-36329351)
chr3 (213-347)||(157008-157140)
chr3 (289-347)||(36822760-36822818)
chr3 (294-347)||(4072273-4072326)
chr3 (294-347)||(10117629-10117682)
chr3 (286-347)||(46664176-46664237)
chr3 (294-346)||(10254687-10254739)
chr3 (289-343)||(5530005-5530059)
chr3 (289-347)||(35368549-35368607)
chr3 (294-355)||(13078155-13078216)
chr3 (294-347)||(21969157-21969210)
chr3 (294-347)||(21991593-21991646)
chr3 (294-347)||(26906572-26906625)
chr3 (294-347)||(36278756-36278809)
chr3 (286-347)||(38125289-38125350)
chr3 (294-347)||(45487917-45487970)
chr3 (294-347)||(50099552-50099605)
chr3 (294-346)||(8831859-8831911)
chr3 (211-278)||(35368801-35368866)
chr3 (214-338)||(44611422-44611543)
chr3 (299-346)||(10017232-10017279)
chr3 (289-347)||(39850344-39850402)
chr3 (213-278)||(46679329-46679392)
chr3 (292-337)||(297651-297696)
chr3 (294-347)||(3970491-3970544)
chr3 (294-347)||(26976842-26976895)
chr3 (211-352)||(42105421-42105559)
chr3 (294-350)||(32237391-32237447)
chr3 (294-349)||(22101283-22101338)
chr3 (296-347)||(55340293-55340344)
chr3 (300-346)||(13723989-13724035)
chr3 (286-348)||(32362860-32362922)
chr3 (290-347)||(10441258-10441315)
chr3 (294-347)||(22176227-22176280)
chr3 (294-347)||(25446368-25446420)
chr3 (294-347)||(35368851-35368904)
chr3 (294-347)||(36329188-36329241)
chr3 (294-343)||(42105387-42105436)
chr3 (294-347)||(46679379-46679432)
chr3 (289-325)||(20366708-20366744)
chr3 (294-350)||(25488338-25488394)
chr3 (211-278)||(32363122-32363187)
chr3 (211-274)||(39677312-39677373)
[»] chr1 (62 HSPs)
chr1 (211-347)||(15324626-15324760)
chr1 (211-347)||(3607767-3607900)
chr1 (211-347)||(47940608-47940742)
chr1 (211-347)||(5189469-5189602)
chr1 (215-346)||(9978093-9978222)
chr1 (232-347)||(19797038-19797152)
chr1 (234-347)||(50627131-50627243)
chr1 (211-346)||(14387053-14387185)
chr1 (211-349)||(6079382-6079517)
chr1 (211-347)||(2125108-2125241)
chr1 (214-347)||(19954952-19955082)
chr1 (211-347)||(42561333-42561466)
chr1 (211-349)||(23698540-23698675)
chr1 (211-347)||(2854570-2854703)
chr1 (211-347)||(4299430-4299566)
chr1 (211-347)||(27240962-27241095)
chr1 (211-347)||(48954252-48954385)
chr1 (211-345)||(50162576-50162708)
chr1 (211-348)||(27928336-27928470)
chr1 (211-350)||(27926289-27926426)
chr1 (232-347)||(9895253-9895367)
chr1 (211-347)||(51789635-51789766)
chr1 (218-348)||(40647115-40647244)
chr1 (211-346)||(51276733-51276865)
chr1 (211-325)||(26208446-26208558)
chr1 (289-347)||(36880624-36880682)
chr1 (286-347)||(49285085-49285146)
chr1 (294-345)||(5189587-5189638)
chr1 (234-346)||(48645073-48645183)
chr1 (211-333)||(1387793-1387911)
chr1 (289-346)||(1387891-1387948)
chr1 (289-346)||(19796982-19797039)
chr1 (294-347)||(47940570-47940623)
chr1 (290-347)||(50627245-50627302)
chr1 (211-278)||(49284332-49284397)
chr1 (215-318)||(957617-957718)
chr1 (246-350)||(21930377-21930481)
chr1 (294-348)||(2125069-2125123)
chr1 (294-347)||(2854532-2854585)
chr1 (294-355)||(9978043-9978104)
chr1 (294-347)||(21930496-21930549)
chr1 (294-347)||(23698502-23698555)
chr1 (294-347)||(27240924-27240977)
chr1 (294-347)||(48954214-48954267)
chr1 (294-347)||(51276695-51276748)
chr1 (294-346)||(3607730-3607782)
chr1 (294-345)||(14387017-14387068)
chr1 (288-343)||(22339096-22339151)
chr1 (295-349)||(25297966-25298020)
chr1 (294-347)||(362475-362528)
chr1 (286-347)||(36880289-36880350)
chr1 (294-345)||(15324745-15324796)
chr1 (294-349)||(27926249-27926304)
chr1 (211-273)||(36880584-36880644)
chr1 (294-347)||(19954911-19954964)
chr1 (290-343)||(28823219-28823272)
chr1 (294-347)||(40647236-40647289)
chr1 (294-347)||(42561295-42561348)
chr1 (294-343)||(49284298-49284347)
chr1 (294-347)||(51789597-51789650)
chr1 (217-276)||(29598393-29598450)
chr1 (293-333)||(35547714-35547754)
[»] chr7 (50 HSPs)
chr7 (215-347)||(20184280-20184410)
chr7 (211-347)||(24836020-24836153)
chr7 (213-347)||(10936510-10936641)
chr7 (211-347)||(31231652-31231787)
chr7 (211-347)||(30594693-30594826)
chr7 (234-347)||(38883221-38883333)
chr7 (211-348)||(34052278-34052412)
chr7 (211-347)||(9285752-9285885)
chr7 (211-347)||(9289819-9289952)
chr7 (211-347)||(30259104-30259237)
chr7 (211-347)||(37093768-37093901)
chr7 (211-349)||(3953080-3953215)
chr7 (211-348)||(39617879-39618013)
chr7 (214-349)||(12142190-12142323)
chr7 (211-345)||(35339316-35339447)
chr7 (290-355)||(38883335-38883400)
chr7 (211-347)||(45997546-45997679)
chr7 (211-347)||(48103368-48103498)
chr7 (286-347)||(38528522-38528583)
chr7 (241-347)||(25742497-25742602)
chr7 (287-347)||(47237539-47237599)
chr7 (289-347)||(35665633-35665691)
chr7 (255-346)||(35665696-35665786)
chr7 (294-346)||(31521527-31521578)
chr7 (294-348)||(24836138-24836192)
chr7 (294-347)||(35339278-35339331)
chr7 (286-343)||(38528394-38528451)
chr7 (294-347)||(39617841-39617894)
chr7 (215-316)||(40358146-40358244)
chr7 (294-338)||(30594811-30594855)
chr7 (211-278)||(31521563-31521628)
chr7 (295-347)||(33721827-33721879)
chr7 (299-338)||(11486873-11486912)
chr7 (294-349)||(20184236-20184291)
chr7 (302-348)||(17101700-17101746)
chr7 (235-317)||(24123815-24123898)
chr7 (294-348)||(31231613-31231667)
chr7 (302-347)||(17101654-17101699)
chr7 (294-347)||(25742435-25742488)
chr7 (294-343)||(30259070-30259119)
chr7 (294-347)||(34052397-34052450)
chr7 (211-347)||(39143750-39143877)
chr7 (288-348)||(29277837-29277897)
chr7 (294-349)||(10936468-10936523)
chr7 (289-348)||(24123754-24123813)
chr7 (294-345)||(37093886-37093937)
chr7 (233-275)||(1402990-1403032)
chr7 (294-348)||(45997507-45997561)
chr7 (286-326)||(2826453-2826493)
chr7 (294-346)||(39143713-39143765)
[»] chr6 (30 HSPs)
chr6 (211-347)||(4890518-4890652)
chr6 (211-347)||(13439695-13439829)
chr6 (211-347)||(21379979-21380112)
chr6 (211-346)||(8091063-8091195)
chr6 (234-348)||(11687202-11687315)
chr6 (211-347)||(15546632-15546765)
chr6 (214-345)||(18998157-18998286)
chr6 (215-347)||(885385-885514)
chr6 (211-346)||(7808610-7808742)
chr6 (211-334)||(14393574-14393697)
chr6 (214-349)||(3368983-3369115)
chr6 (211-348)||(20501705-20501839)
chr6 (211-343)||(31764363-31764492)
chr6 (290-347)||(11687143-11687200)
chr6 (289-346)||(7808722-7808779)
chr6 (211-348)||(4238851-4238987)
chr6 (294-347)||(4890480-4890533)
chr6 (294-347)||(6433690-6433743)
chr6 (294-347)||(8091180-8091233)
chr6 (289-334)||(20501819-20501864)
chr6 (294-347)||(21379941-21379994)
chr6 (211-343)||(29609005-29609134)
chr6 (294-347)||(885503-885556)
chr6 (241-316)||(13172639-13172713)
chr6 (294-347)||(15546750-15546803)
chr6 (211-276)||(30905046-30905109)
chr6 (294-347)||(13172574-13172627)
chr6 (294-347)||(14393682-14393735)
chr6 (294-343)||(29609119-29609168)
chr6 (286-350)||(17279521-17279585)
[»] chr4 (49 HSPs)
chr4 (211-348)||(530707-530841)
chr4 (211-346)||(42274530-42274663)
chr4 (211-349)||(55107522-55107657)
chr4 (211-347)||(1298912-1299045)
chr4 (211-346)||(18417658-18417790)
chr4 (211-347)||(4552785-4552918)
chr4 (211-347)||(20435178-20435311)
chr4 (211-348)||(24969579-24969716)
chr4 (211-346)||(4688285-4688418)
chr4 (218-347)||(28809891-28810018)
chr4 (211-347)||(32318758-32318891)
chr4 (211-347)||(27434610-27434743)
chr4 (211-347)||(13204377-13204510)
chr4 (241-347)||(52824239-52824344)
chr4 (211-347)||(35360677-35360809)
chr4 (211-317)||(21048743-21048845)
chr4 (215-349)||(23928609-23928740)
chr4 (211-347)||(24915832-24915969)
chr4 (289-347)||(11330106-11330164)
chr4 (211-348)||(2272366-2272499)
chr4 (294-347)||(42274492-42274545)
chr4 (294-346)||(4688248-4688300)
chr4 (294-347)||(1299030-1299083)
chr4 (294-347)||(21048705-21048758)
chr4 (294-347)||(24915794-24915847)
chr4 (214-278)||(55049441-55049503)
chr4 (294-349)||(20435138-20435193)
chr4 (294-349)||(27434728-27434783)
chr4 (215-276)||(4895042-4895101)
chr4 (288-350)||(28573944-28574006)
chr4 (294-347)||(530669-530722)
chr4 (294-347)||(3422429-3422482)
chr4 (294-347)||(43486200-43486253)
chr4 (211-275)||(56552132-56552194)
chr4 (294-334)||(9355566-9355606)
chr4 (211-319)||(24294495-24294600)
chr4 (294-346)||(32318721-32318773)
chr4 (291-350)||(3113168-3113227)
chr4 (294-345)||(24969543-24969594)
chr4 (294-348)||(55049399-55049453)
chr4 (294-347)||(4552903-4552956)
chr4 (294-347)||(18417775-18417828)
chr4 (294-347)||(28809846-28809899)
chr4 (292-345)||(37525059-37525112)
chr4 (290-343)||(47465098-47465151)
chr4 (294-347)||(55107642-55107695)
chr4 (211-274)||(9355591-9355652)
chr4 (294-354)||(36030932-36030992)
chr4 (246-274)||(44588713-44588741)
[»] chr2 (42 HSPs)
chr2 (211-347)||(1924018-1924152)
chr2 (211-347)||(9933607-9933740)
chr2 (211-350)||(12850580-12850716)
chr2 (211-349)||(24101870-24102005)
chr2 (211-347)||(23835876-23836010)
chr2 (215-346)||(7737065-7737194)
chr2 (211-347)||(27920573-27920705)
chr2 (244-347)||(20892884-20892987)
chr2 (211-347)||(42713815-42713949)
chr2 (241-350)||(34455882-34455990)
chr2 (211-347)||(45408625-45408758)
chr2 (211-338)||(2818675-2818799)
chr2 (211-347)||(9281385-9281518)
chr2 (211-347)||(16705733-16705866)
chr2 (211-347)||(3116876-3117009)
chr2 (211-347)||(34490456-34490589)
chr2 (234-349)||(22269720-22269834)
chr2 (289-347)||(34490569-34490627)
chr2 (294-347)||(1923980-1924033)
chr2 (211-347)||(6605738-6605867)
chr2 (294-349)||(16705851-16705906)
chr2 (292-347)||(22269838-22269893)
chr2 (289-347)||(24101832-24101890)
chr2 (211-316)||(9850796-9850897)
chr2 (294-347)||(27920690-27920743)
chr2 (294-347)||(43858552-43858605)
chr2 (211-278)||(43476014-43476079)
chr2 (294-350)||(45408743-45408799)
chr2 (211-350)||(7116367-7116503)
chr2 (234-350)||(29229422-29229537)
chr2 (234-350)||(29342722-29342837)
chr2 (294-348)||(9281346-9281400)
chr2 (294-347)||(3116994-3117047)
chr2 (294-347)||(7737183-7737236)
chr2 (294-347)||(43476064-43476117)
chr2 (294-338)||(7116488-7116532)
chr2 (295-350)||(8111692-8111747)
chr2 (294-348)||(2818784-2818838)
chr2 (211-276)||(40362553-40362615)
chr2 (294-347)||(9933570-9933622)
chr2 (294-347)||(42713777-42713830)
chr2 (294-346)||(10552999-10553051)
[»] chr5 (38 HSPs)
chr5 (211-345)||(24397284-24397415)
chr5 (234-347)||(15855843-15855955)
chr5 (234-347)||(35420671-35420783)
chr5 (211-347)||(33629383-33629518)
chr5 (234-343)||(16472959-16473067)
chr5 (211-347)||(20476431-20476564)
chr5 (211-347)||(4265982-4266115)
chr5 (211-347)||(21259768-21259901)
chr5 (211-347)||(1138559-1138692)
chr5 (246-350)||(1164866-1164970)
chr5 (215-350)||(13754333-13754465)
chr5 (197-343)||(8364654-8364797)
chr5 (290-350)||(16473069-16473129)
chr5 (211-343)||(35806939-35807068)
chr5 (211-319)||(21261971-21262076)
chr5 (215-333)||(12807925-12808040)
chr5 (290-348)||(15855957-15856015)
chr5 (290-347)||(35420612-35420669)
chr5 (294-349)||(2268723-2268778)
chr5 (252-343)||(18236470-18236562)
chr5 (294-347)||(20476549-20476602)
chr5 (232-316)||(19976292-19976376)
chr5 (213-319)||(37655192-37655294)
chr5 (294-347)||(1138677-1138730)
chr5 (231-310)||(12744863-12744941)
chr5 (294-347)||(43539225-43539278)
chr5 (299-343)||(780915-780959)
chr5 (294-338)||(12248495-12248539)
chr5 (304-347)||(17583367-17583410)
chr5 (213-275)||(37552348-37552408)
chr5 (294-348)||(32623214-32623268)
chr5 (292-345)||(2255578-2255631)
chr5 (294-335)||(2529099-2529140)
chr5 (294-347)||(4266100-4266153)
chr5 (295-344)||(25751570-25751619)
chr5 (294-347)||(33629345-33629398)
chr5 (292-328)||(10500096-10500132)
chr5 (243-275)||(12257582-12257614)
[»] chr8 (30 HSPs)
chr8 (211-347)||(17426666-17426801)
chr8 (211-347)||(29780997-29781130)
chr8 (211-347)||(15882200-15882334)
chr8 (211-347)||(38629474-38629607)
chr8 (218-347)||(38520018-38520144)
chr8 (211-346)||(37114239-37114371)
chr8 (215-347)||(23940846-23940976)
chr8 (289-350)||(33100642-33100703)
chr8 (211-316)||(40891044-40891146)
chr8 (234-347)||(8210323-8210435)
chr8 (241-346)||(33100711-33100815)
chr8 (211-347)||(11828634-11828774)
chr8 (294-347)||(12234585-12234638)
chr8 (211-347)||(12234466-12234600)
chr8 (286-348)||(24211388-24211450)
chr8 (294-347)||(15882319-15882372)
chr8 (211-311)||(4262014-4262111)
chr8 (294-349)||(29780957-29781012)
chr8 (294-345)||(40891131-40891182)
chr8 (211-349)||(24741861-24741996)
chr8 (294-347)||(17426628-17426681)
chr8 (294-343)||(24741827-24741876)
chr8 (288-349)||(38515616-38515677)
chr8 (294-347)||(38629592-38629645)
chr8 (294-345)||(37114356-37114407)
chr8 (290-347)||(4035741-4035798)
chr8 (286-355)||(5356234-5356303)
chr8 (294-347)||(23940804-23940857)
chr8 (294-347)||(24211278-24211331)
chr8 (287-343)||(35467175-35467231)
[»] scaffold0163 (2 HSPs)
scaffold0163 (211-347)||(1977-2111)
scaffold0163 (294-347)||(1939-1992)
[»] scaffold0122 (2 HSPs)
scaffold0122 (211-347)||(45834-45967)
scaffold0122 (294-350)||(45952-46008)
[»] scaffold0653 (1 HSPs)
scaffold0653 (211-347)||(3431-3564)
[»] scaffold0188 (2 HSPs)
scaffold0188 (211-347)||(7086-7219)
scaffold0188 (294-347)||(7204-7257)
[»] scaffold0107 (2 HSPs)
scaffold0107 (211-347)||(51063-51196)
scaffold0107 (294-347)||(51181-51234)
[»] scaffold0118 (2 HSPs)
scaffold0118 (214-347)||(14442-14572)
scaffold0118 (294-346)||(14560-14612)
[»] scaffold0086 (2 HSPs)
scaffold0086 (214-343)||(48130-48256)
scaffold0086 (294-346)||(48244-48296)
[»] scaffold0069 (1 HSPs)
scaffold0069 (288-347)||(26405-26464)
[»] scaffold0595 (2 HSPs)
scaffold0595 (286-347)||(5701-5762)
scaffold0595 (294-347)||(5823-5878)
[»] scaffold0137 (2 HSPs)
scaffold0137 (215-345)||(10118-10244)
scaffold0137 (294-347)||(10233-10286)
[»] scaffold0013 (1 HSPs)
scaffold0013 (211-278)||(94240-94305)


Alignment Details
Target: chr3 (Bit Score: 172; Significance: 3e-92; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 1648358 - 1648548
Alignment:
Q  1 ttattacaatagcattaataataatggcaatcttattaaatcatccatatgttttcttttgacaaatattatttatatgttttcgaaaaagaatatccta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  1648358 ttattacaatagcattaataataatggcaatcttattaaatcatccatatgttttcttttgacaaatattatttatatgtttttgaaaaagaatat-cta 1648456  T
Q  101 gatctaagaaacttctttaacggccatatgacatgacatttttagttaagtaggattttttcaaaagtcttggacttgtctattttctaaaa 192  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1648457 gatctaagaaacttttttaacggccatatgacatgacatttttagttaagtaggtttttttcaaaagtcttggacttgtctattttctaaaa 1648548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 211 - 346
Target Start/End: Complemental strand, 10254702 - 10254569
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  || |||||| | |||||||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  10254702 atggttcttaactaaatt--catcatgattttctcaaatccataattttttcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccata 10254605  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    ||||||||| ||||| |||||||||||| |||||||    
T  10254604 tgaaaagcacctaaggaattgtacctaagttttctc 10254569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 4072311 - 4072445
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| ||||| |||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  4072311 atggttcttaactaaatt--caccatgatttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccata 4072408  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     ||||| || ||||| |||||||||||| ||||||||    
T  4072409 cgaaaaacacctaaggaattgtacctaagttttctcc 4072445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 3970529 - 3970662
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||| ||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  3970529 atggttcttaactaaatt--caccatgatttccttaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 3970625  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||| | |||||||||||||||||| ||||||||    
T  3970626 cgaaaagtacctaagaaattgtacctaagttttctcc 3970662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 21969195 - 21969328
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||| ||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  21969195 atggttcttaactaaatt--caccatgatttccttaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 21969291  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| ||||| |||||||||||| ||||||||    
T  21969292 cgaaaagcacctaaggaattgtacctaagttttctcc 21969328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 21991631 - 21991764
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||| ||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  21991631 atggttcttaactaaatt--caccatgatttccttaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 21991727  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| ||||| |||||||||||| ||||||||    
T  21991728 cgaaaagcacctaaggaattgtacctaagttttctcc 21991764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 404178 - 404044
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| ||||||| ||||||||||| ||||||||||||||||||       ||| ||||||||||||| || ||||    
T  404178 atggttcttaactaaatt--caccatgatttcctcaagtctataattttctcaaagtttgttatatccaaaaaaatatttatttttagttaaaaatcata 404081  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| |||||||||||||| ||| ||||||||    
T  404080 cgaaaagcacctaagaaattgtacgtaagttttctcc 404044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 211 - 343
Target Start/End: Complemental strand, 8831874 - 8831744
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| || ||||||| |||||||| ||||||||||||||||||       ||||||||||||||| |||||||||    
T  8831874 atggttcttaactaaatt--caccatgatttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagtttagaaccata 8831777  T
Q  311 tgaaaagcatctaagaaattgtacctaaatttt 343  Q
     |||||||| ||||| |||||||||||| ||||    
T  8831776 cgaaaagcacctaaggaattgtacctaagtttt 8831744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 211 - 348
Target Start/End: Original strand, 13078201 - 13078335
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||| ||||| |||||||| ||||||||||||||||||       |||||||||||||||||||| ||||    
T  13078201 atggttcttaactaaatt--caccatgatttccttaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaatcata 13078297  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
     |||||| | |||||||||||||||||| |||||||||    
T  13078298 cgaaaagtacctaagaaattgtacctaagttttctcca 13078335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 25446383 - 25446251
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  25446383 atggttcttaactaaatt--caccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccata 25446286  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| ||||| ||||||| |||| ||||||||    
T  25446285 cgaaaagca-ctaaggaattgta-ctaagttttctcc 25446251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 12789739 - 12789606
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||| ||||||  ||||||||| |||||||||  |||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  12789739 atggttcttaattaaatt--caccatgatttcctcaaattcataattttttcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 12789643  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     ||||| || ||||| |||||||||||| ||||||||    
T  12789642 cgaaaaacacctaaggaattgtacctaagttttctcc 12789606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 45487932 - 45487799
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||  |||||||| |||| |||||||||||||       |||||||||||||||||||||||||    
T  45487932 atggttcttaactaaatt--caccatgatttcctcaaattcataattttctcaatgtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 45487836  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| ||||| |||||||||||| ||||||||    
T  45487835 cgaaaagcacctaaggaattgtacctaagttttctcc 45487799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 234 - 346
Target Start/End: Complemental strand, 10017226 - 10017115
Alignment:
Q  234 catgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgta 333  Q
    |||||| | |||||||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| ||||| |||||||    
T  10017226 catgattttctcaaatccataattttttcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatatgaaaagcacctaaggaattgta 10017128  T
Q  334 cctaaattttctc 346  Q
    ||||| |||||||    
T  10017127 cctaagttttctc 10017115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 346
Target Start/End: Complemental strand, 5530006 - 5529892
Alignment:
Q  232 accatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattg 331  Q
    |||||||| || | |||||||||||||| |||||||||| |||||||       ||||||||||||||||||||||||| |||||||| |||||||||||    
T  5530006 accatgatttctttaaatctataattttctcaaagtttgatatatccaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattg 5529907  T
Q  332 tacctaaattttctc 346  Q
    ||||||| |||||||    
T  5529906 tacctaagttttctc 5529892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 234 - 347
Target Start/End: Original strand, 36657492 - 36657604
Alignment:
Q  234 catgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgta 333  Q
    |||||| |||||||||| |||||||| |||||||||||||||||        ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  36657492 catgatttcctcaaatccataattttctcaaagtttgttatatc-aaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgta 36657590  T
Q  334 cctaaattttctcc 347  Q
    ||||| ||||||||    
T  36657591 cctaagttttctcc 36657604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 32237432 - 32237565
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||||||||||||||||||  |||||| | |||| ||| |||||||| ||||||||||||||||||       |||||||||||| ||||||||||||    
T  32237432 atggttcttaactaaatttac--catgattttctcagatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttaattaagaaccata 32237528  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| ||||| |||||||||||| ||||||||    
T  32237529 cgaaaagcacctaaggaattgtacctaagttttctcc 32237565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 36822798 - 36822931
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||  |||  |||||| |||||| ||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  36822798 atggttcttaactaaaaatac--catgatttcctcagatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 36822894  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| |||| ||||||||||||| ||||||||    
T  36822895 cgaaaagcacctaaaaaattgtacctaagttttctcc 36822931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 243 - 346
Target Start/End: Complemental strand, 10117619 - 10117516
Alignment:
Q  243 ctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattt 342  Q
    |||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||||| ||||| || ||||||||| |||    
T  10117619 ctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatatgaaaagcacctaaggaactgtacctaagttt 10117520  T
Q  343 tctc 346  Q
    ||||    
T  10117519 tctc 10117516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 215 - 349
Target Start/End: Original strand, 55340335 - 55340467
Alignment:
Q  215 ttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaa 314  Q
    |||||||||| |||  ||||||||| | |||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||||||    
T  55340335 ttcttaactatatt--caccatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatatgaa 55340432  T
Q  315 aagcatctaagaaattgtacctaaattttctccat 349  Q
    ||  | ||||| ||||||| |||| ||||||||||    
T  55340433 aaatacctaaggaattgtatctaagttttctccat 55340467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 211 - 345
Target Start/End: Complemental strand, 12838210 - 12838079
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||| |||||||||||  ||||||||| |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  12838210 atggtttttaactaaatt--caccatgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccata 12838114  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttct 345  Q
      ||||||| ||||| |||||||| ||| ||||||    
T  12838113 caaaaagcacctaaggaattgtacataagttttct 12838079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 214 - 347
Target Start/End: Original strand, 25488382 - 25488512
Alignment:
Q  214 gttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatga 313  Q
    |||||||||||||||  ||||||||| || ||| ||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||  |    
T  25488382 gttcttaactaaatt--caccatgatttcttcatatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaa 25488478  T
Q  314 aaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||| ||||| |||||||||||| ||||||||    
T  25488479 aaagcacctaaggaattgtacctaagttttctcc 25488512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 214 - 347
Target Start/End: Complemental strand, 25561141 - 25561011
Alignment:
Q  214 gttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatga 313  Q
    |||||||||||||||  ||||||||| || ||| ||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||  |    
T  25561141 gttcttaactaaatt--caccatgatttcttcatatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaa 25561045  T
Q  314 aaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||| ||||| |||||||||||| ||||||||    
T  25561044 aaagcacctaaggaattgtacctaagttttctcc 25561011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 215 - 344
Target Start/End: Original strand, 45712945 - 45713071
Alignment:
Q  215 ttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaa 314  Q
    ||||||||||||||  ||||||||| |||||||| | |||||||| ||||||||||||||||||       ||||||||||||||| ||||||||| |||    
T  45712945 ttcttaactaaatt--caccatgatttcctcaaagccataattttatcaaagtttgttatatccaaaaaa-tatgtatttttagtttagaaccatacgaa 45713041  T
Q  315 aagcatctaagaaattgtacctaaattttc 344  Q
    ||||| ||||| |||||||||||| |||||    
T  45713042 aagcacctaaggaattgtacctaagttttc 45713071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 318
Target Start/End: Complemental strand, 22101298 - 22101193
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||| ||||| |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  22101298 atggttcttaactaaatt--cactatgatttcctcaaatccataattttctcaaagtttgttatatccaacaaaatatgtatttttagttaagaaccata 22101201  T
Q  311 tgaaaagc 318  Q
     |||||||    
T  22101200 cgaaaagc 22101193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 26906587 - 26906454
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||| ||||| |||||||||  |||||||| ||||||||||||||||||       ||| |||||||||||||||||||||    
T  26906587 atggttcttaactaaatt--cactatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccata 26906491  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||| | ||||| |||||||||||| ||||||||    
T  26906490 cgaaaaggacctaaggaattgtacctaagttttctcc 26906454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 36278794 - 36278927
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||| ||||| |||||||||  |||||||| ||||||||||||||||||       ||| |||||||||||||||||||||    
T  36278794 atggttcttaactaaatt--cactatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccata 36278890  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||| | ||||| |||||||||||| ||||||||    
T  36278891 cgaaaaggacctaaggaattgtacctaagttttctcc 36278927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 215 - 345
Target Start/End: Original strand, 43639123 - 43639251
Alignment:
Q  215 ttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaa 314  Q
    |||||||| |||||  ||||||||| || ||||||| |||||||| ||||||||||||||||||       ||| |||||||||||||||| |||| |||    
T  43639123 ttcttaaccaaatt--caccatgatttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatatatttttagttaagaatcatacgaa 43639220  T
Q  315 aagcatctaagaaattgtacctaaattttct 345  Q
    ||||| ||||| |||||||||||| ||||||    
T  43639221 aagcacctaaggaattgtacctaagttttct 43639251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 352 - 411
Target Start/End: Original strand, 1648539 - 1648598
Alignment:
Q  352 ttttctaaaatattaaccctagcccgaatcttatgtaggctatctcacatgctccctatg 411  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  1648539 ttttctaaaatattatccctagcccgaatcttatgtaggctatctcacatgccccctatg 1648598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 347
Target Start/End: Original strand, 10441317 - 10441429
Alignment:
Q  234 catgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgta 333  Q
    |||||| |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||| ||  ||||||| ||||| |||||||    
T  10441317 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccgtaccaaaagcacctaaggaattgta 10441415  T
Q  334 cctaaattttctcc 347  Q
    ||||| ||||||||    
T  10441416 cctaagttttctcc 10441429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 318
Target Start/End: Complemental strand, 22176242 - 22176137
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||| ||||| |||||||||| |||||||| ||||||||||| ||||||       |||||||||||||||||||||||||    
T  22176242 atggttcttaactaaatt--cactatgatttcctcaaatccataattttctcaaagtttgtaatatccaacaaaatatgtatttttagttaagaaccata 22176145  T
Q  311 tgaaaagc 318  Q
     |||||||    
T  22176144 cgaaaagc 22176137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 44920684 - 44920816
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||||||  ||||| | ||||||| ||||||||| ||||||||| ||||||||       ||||||||||||||||||||| |||    
T  44920684 atggttcttaactaaatttaca--atgattttctcaaatttataattttctcaaagtttattatatcc-aaaaaatatgtatttttagttaagaactata 44920780  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
      |||| ||| ||||||||||||||||| ||||||||    
T  44920781 -aaaaaacatataagaaattgtacctaagttttctcc 44920816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 39850382 - 39850516
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttca-aagtttgttatatccnnnnnnntatgtatttttagttaagaaccat 309  Q
    ||||||||||||||||  |||  |||||| |||||||||| |||||||| ||| |||||||||||||||       ||| |||||||||||||||| |||    
T  39850382 atggttcttaactaaaaatac--catgatttcctcaaatccataattttctcacaagtttgttatatccaaaaaa-tatatatttttagttaagaatcat 39850478  T
Q  310 atgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    | |||||||| ||||| |||||||||||| ||||||||    
T  39850479 acgaaaagcacctaaggaattgtacctaagttttctcc 39850516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 215 - 348
Target Start/End: Complemental strand, 43150609 - 43150479
Alignment:
Q  215 ttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaa 314  Q
    ||||||||||||||  ||| ||||| |||||||||  |||||||| ||||||||||||||||||       ||||||||||||||||| ||||||| |||    
T  43150609 ttcttaactaaatt--cactatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaaaaaccatacgaa 43150513  T
Q  315 aagcatctaagaaattgtacctaaattttctcca 348  Q
    ||||| || || ||||| |||||| |||||||||    
T  43150512 aagcacctgaggaattgcacctaagttttctcca 43150479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 211 - 348
Target Start/End: Complemental strand, 50099567 - 50099431
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatcc-nnnnnnntatgtatttttagttaagaaccat 309  Q
    ||||||||||||||||||  |||||| || |||||||||  |||||||| ||||||||||||||||||        |||||||||||| |||| ||||||    
T  50099567 atggttcttaactaaatt--caccataatttcctcaaattcataattttctcaaagtttgttatatccaaaaaaaatatgtatttttaattaaaaaccat 50099470  T
Q  310 atgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    | |||||||| ||||  |||||||| | |||||||||||    
T  50099469 acgaaaagcacctaacgaattgtacatgaattttctcca 50099431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 26977808 - 26977861
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  26977808 tttagttaagaaccatatgaaaagtatctaagaaattgtacctaagttttctcc 26977861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 36657490 - 36657433
Alignment:
Q  290 tatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||    
T  36657490 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 36657433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 211 - 343
Target Start/End: Original strand, 1476589 - 1476718
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||||| | |||||||  ||||||||| |||| ||||| |||||| | |||||||||||||| ||        | |||||||||||||||||||||||    
T  1476589 atggttctaacctaaatt--caccatgatttccttaaatccataattctctcaaagtttgttatctctaaaaaaat-tgtatttttagttaagaaccata 1476685  T
Q  311 tgaaaagcatctaagaaattgtacctaaatttt 343  Q
    ||||||||| ||||| |||||||||||| ||||    
T  1476686 tgaaaagcacctaaggaattgtacctaagtttt 1476718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 13724026 - 13724159
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||||||| |||||||  ||||||||| || ||||||  |||||||| ||||||||||||||||||       ||||||||||||||||| ||  |||    
T  13724026 atggttctta-ctaaatt--caccatgatttcttcaaattcataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaaaaattata 13724122  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     ||||| |||||||| ||||||||||||  |||||||    
T  13724123 cgaaaaacatctaaggaattgtacctaagatttctcc 13724159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 347
Target Start/End: Original strand, 36329246 - 36329351
Alignment:
Q  241 tcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaat 340  Q
    |||||||||| |||||||| ||||||||||||||||||       ||||||||||||||||||||||||| |||||||| ||||  ||||||| |||  |    
T  36329246 tcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaagaattgtagctacct 36329344  T
Q  341 tttctcc 347  Q
    |||||||    
T  36329345 tttctcc 36329351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 347
Target Start/End: Original strand, 157008 - 157140
Alignment:
Q  213 ggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatg 312  Q
    ||||||||||||||||||   ||| || |||||||||| |||||||| ||||||||||||||||         ||||||||||||| ||||||| |||      
T  157008 ggttcttaactaaatttat--cataatttcctcaaatccataattttctcaaagtttgttatataaaaaaaaatatgtatttttagctaagaactatacc 157105  T
Q  313 aaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||| |||||||||||||  ||| ||||||||    
T  157106 aaaagcacctaagaaattgtatataagttttctcc 157140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 36822818 - 36822760
Alignment:
Q  289 gtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  36822818 gtatttttagttaagaaccatacgaaaagcagctaaggaattgtacctaagttttctcc 36822760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 4072326 - 4072273
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  4072326 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 4072273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 10117629 - 10117682
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||||||||||||    
T  10117629 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctcc 10117682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 46664237 - 46664176
Alignment:
Q  286 tatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||||||| ||| |||||  | |||||||||||||||||||||||||||    
T  46664237 tatgtatttttagttaagaactatacgaaaaatacctaagaaattgtacctaaattttctcc 46664176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 10254687 - 10254739
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||||||||||||    
T  10254687 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctc 10254739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 5530005 - 5530059
Alignment:
Q  289 gtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaatttt 343  Q
    |||||||||||||| ||||||| ||||||||  ||||||||||||||||||||||    
T  5530005 gtatttttagttaataaccatacgaaaagcacttaagaaattgtacctaaatttt 5530059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 35368607 - 35368549
Alignment:
Q  289 gtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||||||||| ||||||||  |||| |||||||||||| ||||||||    
T  35368607 gtatttttagttaagaaccatacgaaaagcacataaggaattgtacctaagttttctcc 35368549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 13078216 - 13078155
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccattctttt 355  Q
    ||||||||||||||||| |||||||| ||||| ||||| |||||| ||||||||||| ||||    
T  13078216 tttagttaagaaccatacgaaaagcacctaaggaattgcacctaagttttctccattatttt 13078155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 21969210 - 21969157
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  21969210 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 21969157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 21991646 - 21991593
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  21991646 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 21991593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 26906572 - 26906625
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||| ||||||||    
T  26906572 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctcc 26906625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 36278809 - 36278756
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||| ||||||||    
T  36278809 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctcc 36278756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 38125289 - 38125350
Alignment:
Q  286 tatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||||||||||| ||||| || ||||  |||||||||||| ||||||||    
T  38125289 tatgtatttttagttaagaaccatacgaaaaacacctaatgaattgtacctaagttttctcc 38125350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 45487917 - 45487970
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  45487917 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 45487970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 50099552 - 50099605
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  50099552 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 50099605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 8831859 - 8831911
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||| |||||||    
T  8831859 tttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttctc 8831911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 278
Target Start/End: Complemental strand, 35368866 - 35368801
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatcc 278  Q
    |||||| |||||||||||  ||||||||| | |||||||| |||||||| ||||||||||||||||||    
T  35368866 atggtttttaactaaatt--caccatgattttctcaaatccataattttctcaaagtttgttatatcc 35368801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 338
Target Start/End: Original strand, 44611422 - 44611543
Alignment:
Q  214 gttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatga 313  Q
    |||||||||||||||  ||||||||| || ||||||  |||||||| |||||||||||||||| |       ||| ||||||||||||| |||||||  |    
T  44611422 gttcttaactaaatt--caccatgatttcttcaaattcataattttctcaaagtttgttatat-caaaaaaatatatatttttagttaaaaaccatacaa 44611518  T
Q  314 aaagcatctaagaaattgtacctaa 338  Q
    ||| || ||||| ||||||||||||    
T  44611519 aaaacacctaaggaattgtacctaa 44611543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 346
Target Start/End: Original strand, 10017232 - 10017279
Alignment:
Q  299 ttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    |||||||||||| |||||||| ||||| ||||||||||||||||||||    
T  10017232 ttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctc 10017279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 39850402 - 39850344
Alignment:
Q  289 gtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||||||||| ||||| || ||||| ||| |||||||| ||||||||    
T  39850402 gtatttttagttaagaaccatacgaaaaacacctaaggaatagtacctaagttttctcc 39850344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 46679392 - 46679329
Alignment:
Q  213 ggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatcc 278  Q
    ||||||||||||||||  |||||| || |||||||||| |||||||| ||||||||||||| ||||    
T  46679392 ggttcttaactaaatt--caccataatttcctcaaatccataattttctcaaagtttgttaaatcc 46679329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 297651 - 297696
Alignment:
Q  292 tttttagttaagaaccatatgaaaagcatctaagaaattgtaccta 337  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||||    
T  297651 tttttagttaagaatcatatgaaaagcatctaaaaaattttaccta 297696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 3970544 - 3970491
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| ||||| |||||| ||||||||    
T  3970544 tttagttaagaaccatacgaaaagcacctaaggaattgcacctaagttttctcc 3970491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 26976895 - 26976842
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||| |||||||| ||| |||||||| |||||||||||||||||| ||||||||    
T  26976895 tttaattaagaactatacgaaaagcacctaagaaattgtacctaagttttctcc 26976842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 352
Target Start/End: Original strand, 42105421 - 42105559
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  |||| |||| | || ||||| |||||| | |||||||||||||| ||        | |||||||||||||||||||||||    
T  42105421 atggttcttaactaaatt--caccgtgattttcttaaatccataattctctcaaagtttgttatctctaaaaaaat-tgtatttttagttaagaaccata 42105517  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctccattct 352  Q
      |||| || ||| |||||||||| ||| |||| ||||||||    
T  42105518 caaaaaacacctacgaaattgtacttaagttttgtccattct 42105559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 32237447 - 32237391
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccatt 350  Q
    ||||||||||||||||| ||||| || ||||| |||||||||||| |||||| ||||    
T  32237447 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctgcatt 32237391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 349
Target Start/End: Original strand, 22101283 - 22101338
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
    ||||||||||||||||| |||||||   |||| |||||||||||| ||||||||||    
T  22101283 tttagttaagaaccatacgaaaagctcataaggaattgtacctaagttttctccat 22101338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 347
Target Start/End: Complemental strand, 55340344 - 55340293
Alignment:
Q  296 tagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||| |||| ||||| ||  ||||||||||||||||||||||||||    
T  55340344 tagttaagaatcatacgaaaaacacataagaaattgtacctaaattttctcc 55340293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 346
Target Start/End: Complemental strand, 13724035 - 13723989
Alignment:
Q  300 taagaaccatatgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    |||||||||||  ||||||| |||||||||||||||||| |||||||    
T  13724035 taagaaccatacaaaaagcacctaagaaattgtacctaagttttctc 13723989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 32362922 - 32362860
Alignment:
Q  286 tatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    ||||||||||||||||||||||||| ||||| || ||||  |||||||  ||| |||||||||    
T  32362922 tatgtatttttagttaagaaccatacgaaaaacacctaaagaattgtagttaagttttctcca 32362860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 10441315 - 10441258
Alignment:
Q  290 tatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||| ||||  ||||||| ||||| |||||||| ||| ||||||||    
T  10441315 tatttttagttaagaatcataccaaaagcacctaaggaattgtacttaagttttctcc 10441258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 22176227 - 22176280
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||||  |||||||  |||| |||||||||||| ||||||||    
T  22176227 tttagttaagaaccatacaaaaagcacataaggaattgtacctaagttttctcc 22176280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 25446368 - 25446420
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| ||||||| |||| ||||||||    
T  25446368 tttagttaagaaccatacgaaaagcacctaaggaattgta-ctaagttttctcc 25446420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 35368851 - 35368904
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||| ||||||| ||||| ||  ||||||||||||||||| ||||||||    
T  35368851 tttagttaaaaaccatacgaaaaacacataagaaattgtacctaagttttctcc 35368904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 36329241 - 36329188
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||| |||||||| |||  ||||| |||||||||||||||||||| ||||||||    
T  36329241 tttatttaagaacaatacaaaaagtatctaagaaattgtacctaagttttctcc 36329188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 42105436 - 42105387
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaatttt 343  Q
    ||||||||||||||||| |||||| | ||| |||||||||||||| ||||    
T  42105436 tttagttaagaaccataagaaaagtacctatgaaattgtacctaagtttt 42105387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 46679379 - 46679432
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||| ||| ||||||||| ||| |||||||| ||| ||||||||    
T  46679379 tttagttaagaaccgtataaaaagcatccaaggaattgtacttaagttttctcc 46679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 20366744 - 20366708
Alignment:
Q  289 gtatttttagttaagaaccatatgaaaagcatctaag 325  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  20366744 gtatttttagttaagaaccatacgaaaaacatctaag 20366708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 25488394 - 25488338
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccatt 350  Q
    ||||||||||||| ||| |||||||| ||||| |||||||| |||  ||||||||||    
T  25488394 tttagttaagaactatacgaaaagcacctaaggaattgtacttaagatttctccatt 25488338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 278
Target Start/End: Complemental strand, 32363187 - 32363122
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatcc 278  Q
    |||||| |||||||||||||||  || || | |||||||| |||||||||| ||| ||||||||||||    
T  32363187 atggttattaactaaatttaca--ataattttctcaaatccataattttttaaaaatttgttatatcc 32363122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 39677312 - 39677373
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttat 274  Q
    ||||||||||| ||||||  ||| ||||| | |||||||  |||||||||||||||||||||||    
T  39677312 atggttcttaattaaatt--cactatgattttctcaaattcataattttttcaaagtttgttat 39677373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 15324760 - 15324626
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||| ||||| |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  15324760 atggttcttaactaaatt--cactatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccata 15324663  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| |||||||||||||||||| ||||||||    
T  15324662 cgaaaagcacctaagaaattgtacctaagttttctcc 15324626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 3607767 - 3607900
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  || |||||| |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  3607767 atggttcttaactaaatt--catcatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 3607863  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| |||||||||||||||||| ||||||||    
T  3607864 cgaaaagcacctaagaaattgtacctaagttttctcc 3607900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 47940608 - 47940742
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| ||||| |||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  47940608 atggttcttaactaaatt--caccatgatttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccata 47940705  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     ||||| || ||||| |||||||||||| ||||||||    
T  47940706 cgaaaaacacctaaggaattgtacctaagttttctcc 47940742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 5189602 - 5189469
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||| ||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  5189602 atggttcttaactaaatt--caccatgatttccttaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 5189506  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| ||||| |||||||||||| ||||||||    
T  5189505 cgaaaagcacctaaggaattgtacctaagttttctcc 5189469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 215 - 346
Target Start/End: Original strand, 9978093 - 9978222
Alignment:
Q  215 ttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaa 314  Q
    ||||||||||||||  ||| ||||| |||||||||| |||||||| ||||||||||||||||||       ||||||||||||||||||||||||| |||    
T  9978093 ttcttaactaaatt--cactatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaa 9978190  T
Q  315 aagcatctaagaaattgtacctaaattttctc 346  Q
    ||||| ||||| |||||||||||| |||||||    
T  9978191 aagcacctaaggaattgtacctaagttttctc 9978222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 232 - 347
Target Start/End: Original strand, 19797038 - 19797152
Alignment:
Q  232 accatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattg 331  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||| |||||||| ||||| |||||    
T  19797038 accatgatttcctcaaatccataattttttcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcacctaaggaattg 19797136  T
Q  332 tacctaaattttctcc 347  Q
    ||||||| ||||||||    
T  19797137 tacctaagttttctcc 19797152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 234 - 347
Target Start/End: Complemental strand, 50627243 - 50627131
Alignment:
Q  234 catgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgta 333  Q
    |||||| |||||||||| |||||||| ||||||||||||||||||       ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  50627243 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcatctaaggaattgta 50627145  T
Q  334 cctaaattttctcc 347  Q
    ||||| ||||||||    
T  50627144 cctaagttttctcc 50627131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 14387053 - 14387185
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||||| ||||||||| ||||||||       |||||||||||||||||||||||||    
T  14387053 atggttcttaactaaatt--caccatgatttcctcaaatccataattttctcaaagtttattatatcc-aaaaaatatgtatttttagttaagaaccata 14387149  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctc 346  Q
     ||||| || ||||| |||||||||||| |||||||    
T  14387150 cgaaaaacacctaaggaattgtacctaagttttctc 14387185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 211 - 349
Target Start/End: Complemental strand, 6079517 - 6079382
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||||| ||||||||||||||||||       |||||||||||||| ||||||| ||    
T  6079517 atggttcttaactaaatt--caccatgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagtgaagaaccgta 6079421  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
     ||||| |||||||| |||||||||| | ||||||||||    
T  6079420 cgaaaaacatctaaggaattgtacctgagttttctccat 6079382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 2125108 - 2125241
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |  | |||| ||||||||| |||||||||||||||||        ||||||||||||||||||||| |||    
T  2125108 atggttcttaactaaatt--caccatgatttttttaaatttataattttctcaaagtttgttatatc-aaaaaaatatgtatttttagttaagaactata 2125204  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| |||||||||||||||||||||||||||    
T  2125205 cgaaaagcacctaagaaattgtacctaaattttctcc 2125241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 214 - 347
Target Start/End: Original strand, 19954952 - 19955082
Alignment:
Q  214 gttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatga 313  Q
    |||||||||||||||  ||||||||| |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||  |    
T  19954952 gttcttaactaaatt--caccatgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccatacaa 19955048  T
Q  314 aaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||| | ||||| |||||||||||| ||||||||    
T  19955049 aaagtacctaaggaattgtacctaagttttctcc 19955082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 42561333 - 42561466
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| || ||| ||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  42561333 atggttcttaactaaatt--caccatgatttcttcatatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 42561429  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
      ||||||| ||||| |||||||||||| ||||||||    
T  42561430 caaaaagcacctaaggaattgtacctaagttttctcc 42561466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 211 - 349
Target Start/End: Original strand, 23698540 - 23698675
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||| ||||| |||||||||  |||||||| ||||||||||||||||||       ||| |||||||||||||||||||||    
T  23698540 atggttcttaactaaatt--cactatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccata 23698636  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
     |||||| | ||||| |||||||||||| ||||||||||    
T  23698637 cgaaaaggacctaaggaattgtacctaagttttctccat 23698675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 2854570 - 2854703
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||| ||||| |||||||||  |||||||| ||||||||||||||||||       ||| |||||||||||||||||||||    
T  2854570 atggttcttaactaaatt--cactatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccata 2854666  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||| | ||||| |||||||||||| ||||||||    
T  2854667 cgaaaaggacctaaggaattgtacctaagttttctcc 2854703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 4299430 - 4299566
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnn--tatgtatttttagttaagaacca 308  Q
    |||| |||||||||||||  |||||| || |||||||||| |||||||| ||||||||||||||||||         |||||||||||||||||||||||    
T  4299430 atggctcttaactaaatt--caccattatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaaaatatgtatttttagttaagaacca 4299527  T
Q  309 tatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    || ||||| || ||||| |||||||||||| ||||||||    
T  4299528 tacgaaaaacacctaaggaattgtacctaagttttctcc 4299566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 27240962 - 27241095
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| | |||||||| |||||||| ||||||||||||||||||       ||| |||||||||||||||||||||    
T  27240962 atggttcttaactaaatt--caccatgattttctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaaccata 27241058  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     | |||||| ||||  |||||||||||| ||||||||    
T  27241059 cgcaaagcacctaacgaattgtacctaagttttctcc 27241095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 48954252 - 48954385
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||| ||||| |||||||||  |||||||| ||||||||||||||||||       ||| |||||||||||||||||||||    
T  48954252 atggttcttaactaaatt--cactatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccata 48954348  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||| | ||||| |||||||||||| ||||||||    
T  48954349 cgaaaaggacctaaggaattgtacctaagttttctcc 48954385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 211 - 345
Target Start/End: Original strand, 50162576 - 50162708
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||| |||| ||||||  |||| |||| | ||||||||||||||||| ||||||||||||||||||       |||||| ||||||||||||||||||    
T  50162576 atggtttttaattaaatt--caccgtgattttctcaaatctataattttctcaaagtttgttatatccaaaaaaatatgtaattttagttaagaaccata 50162673  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttct 345  Q
      ||||||| ||||| |||||||||||| ||||||    
T  50162674 caaaaagcacctaaggaattgtacctaagttttct 50162708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 211 - 348
Target Start/End: Original strand, 27928336 - 27928470
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  |||  |||| ||||||| || |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  27928336 atggttcttaactaaatt--cactgtgatttcctcaa-tccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccata 27928432  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
     ||||| || ||||| |||||||| ||| |||||||||    
T  27928433 cgaaaaacacctaaggaattgtacataagttttctcca 27928470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 211 - 350
Target Start/End: Original strand, 27926289 - 27926426
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnn-tatgtatttttagttaagaaccat 309  Q
    ||||||||||||||||||  |||  |||| ||||||| || |||||||| ||||||||||||||||||        ||||||||||||||||||||||||    
T  27926289 atggttcttaactaaatt--cactgtgatttcctcaa-tccataattttctcaaagtttgttatatccaaaaaaaatatgtatttttagttaagaaccat 27926385  T
Q  310 atgaaaagcatctaagaaattgtacctaaattttctccatt 350  Q
    | |||||||| ||||| |||||||| ||| |||||||||||    
T  27926386 acgaaaagcacctaaggaattgtacataagttttctccatt 27926426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 347
Target Start/End: Complemental strand, 9895367 - 9895253
Alignment:
Q  232 accatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattg 331  Q
    |||||||| |||||||||  |||||||| |||||||||||||||||        ||||||||||||||||||||||||| |||||| | |||| |||||     
T  9895367 accatgatttcctcaaatacataattttctcaaagtttgttatatc-aaaaaaatatgtatttttagttaagaaccatacgaaaagtacctaaaaaatta 9895269  T
Q  332 tacctaaattttctcc 347  Q
    ||||||||||||||||    
T  9895268 tacctaaattttctcc 9895253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 51789635 - 51789766
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||| |||||||||||  ||||||||| ||||||| || |||||||| ||||||| |||||||||         |||| |||||||||||||||||||    
T  51789635 atggtttttaactaaatt--caccatgatttcctcaattccataattttctcaaagtatgttatatctaaaaa---atgtgtttttagttaagaaccata 51789729  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     ||||||||| |||| |||||||||||| ||||||||    
T  51789730 cgaaaagcatttaaggaattgtacctaagttttctcc 51789766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 218 - 348
Target Start/End: Complemental strand, 40647244 - 40647115
Alignment:
Q  218 ttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnn-tatgtatttttagttaagaaccatatgaaaa 316  Q
    |||||||||||  ||||||||| |||||||||| |||||||| ||||||||||||||||          ||||||||||||||||||||||| | |||||    
T  40647244 ttaactaaatt--caccatgatttcctcaaatccataattttctcaaagtttgttatataaaaaaaaaatatgtatttttagttaagaaccacacgaaaa 40647147  T
Q  317 gcatctaagaaattgtacctaaattttctcca 348  Q
    ||| ||||| ||||||| |||| |||||||||    
T  40647146 gcagctaaggaattgtaactaagttttctcca 40647115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 51276733 - 51276865
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||  ||||| |||||||||| |||||||| ||||||||| ||||||          |||||||||||| |||||||||||    
T  51276733 atggttcttaactaaatt--cattatgatttcctcaaatccataattttctcaaagtttattatataaaaaaaaa-atgtatttttagctaagaaccata 51276829  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctc 346  Q
     |||||||| |||||||||||||||||| |||||||    
T  51276830 cgaaaagcacctaagaaattgtacctaagttttctc 51276865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 211 - 325
Target Start/End: Complemental strand, 26208558 - 26208446
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||||| |||||||||  |||||| || || ||||||| |||||||| ||||||||||||||||||       ||||||||||||||| |||||||||    
T  26208558 atggttctgaactaaatt--caccataatttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttgagaaccata 26208461  T
Q  311 tgaaaagcatctaag 325  Q
     |||||||| |||||    
T  26208460 cgaaaagcacctaag 26208446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 36880624 - 36880682
Alignment:
Q  289 gtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||    
T  36880624 gtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 36880682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 49285085 - 49285146
Alignment:
Q  286 tatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  49285085 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 49285146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 5189587 - 5189638
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttct 345  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  5189587 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaaattttct 5189638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 234 - 346
Target Start/End: Original strand, 48645073 - 48645183
Alignment:
Q  234 catgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgta 333  Q
    |||||| |||||||||| |||||||| |||||||||||||||||        |||||||||||||||||||||| || |||||||| |||| ||||||      
T  48645073 catgatttcctcaaatccataattttctcaaagtttgttatatc-taaaaaatatgtatttttagttaagaacc-tacgaaaagcacctaaaaaattgcc 48645170  T
Q  334 cctaaattttctc 346  Q
    |||||||||||||    
T  48645171 cctaaattttctc 48645183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 333
Target Start/End: Complemental strand, 1387911 - 1387793
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||  |||  |||||| |||||||||  |||||||| ||||||||| ||||||||       |||||||||||||||||||||||||    
T  1387911 atggttcttaactaaagatac--catgatttcctcaaattcataattttctcaaagtttattatatccaaaaaa-tatgtatttttagttaagaaccata 1387815  T
Q  311 tgaaaagcatctaagaaattgta 333  Q
     |||||||| ||||| |||||||    
T  1387814 cgaaaagca-ctaaggaattgta 1387793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 1387891 - 1387948
Alignment:
Q  289 gtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    |||| ||||||||||||||||| |||||||| ||||| ||||||||||||||||||||    
T  1387891 gtatctttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctc 1387948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 19797039 - 19796982
Alignment:
Q  289 gtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    |||||||||||||| ||||||| |||||||| |||||||||||||||||| |||||||    
T  19797039 gtatttttagttaaaaaccatacgaaaagcacctaagaaattgtacctaagttttctc 19796982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 47940623 - 47940570
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  47940623 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 47940570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 50627245 - 50627302
Alignment:
Q  290 tatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||    
T  50627245 tatttttagttaagaaccatacgaaaagcatataaggaattgtacctaagttttctcc 50627302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 211 - 278
Target Start/End: Original strand, 49284332 - 49284397
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatcc 278  Q
    ||||||||||||||||||  ||||||||| | || ||||| |||||||||||||||||||||||||||    
T  49284332 atggttcttaactaaatt--caccatgattttcttaaatccataattttttcaaagtttgttatatcc 49284397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 957718 - 957617
Alignment:
Q  215 ttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaa 314  Q
    ||||||||||||||  ||||||||| | |||||||| |||||||| |||||||||||||||||        |||||| ||||||||||||| |||| |||    
T  957718 ttcttaactaaatt--caccatgattttctcaaatccataattttctcaaagtttgttatatcaaaaaaaatatgtaattttagttaagaatcatacgaa 957621  T
Q  315 aagc 318  Q
    ||||    
T  957620 aagc 957617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 350
Target Start/End: Complemental strand, 21930481 - 21930377
Alignment:
Q  246 aaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttct 345  Q
    ||||| |||||||| | ||||||||||||||||       ||||||||||||||||||||||||| ||||| || ||||| ||||||| || |  |||||    
T  21930481 aaatccataattttcttaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccatacgaaaaacaactaaggaattgtaactgaggtttct 21930382  T
Q  346 ccatt 350  Q
    |||||    
T  21930381 ccatt 21930377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 2125123 - 2125069
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    ||||||||||||||||| ||||||||  |||||||||||| ||||||||||||||    
T  2125123 tttagttaagaaccatacgaaaagcacataagaaattgtaactaaattttctcca 2125069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 2854585 - 2854532
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||| ||||||||    
T  2854585 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctcc 2854532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 9978104 - 9978043
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccattctttt 355  Q
    |||||||||||| |||| ||||||||  |||| |||||||||||||||||||||||| ||||    
T  9978104 tttagttaagaatcatacgaaaagcacataaggaattgtacctaaattttctccattttttt 9978043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 21930496 - 21930549
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| ||||| || ||||| |||||||||||||||||||||    
T  21930496 tttagttaagaaccatacgaaaaacacctaagtaattgtacctaaattttctcc 21930549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 23698555 - 23698502
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||| ||||||||    
T  23698555 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctcc 23698502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 27240977 - 27240924
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  27240977 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 27240924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 48954267 - 48954214
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||||||||||| | ||||| |||||||||||| ||||||||    
T  48954267 tttagttaagaaccatatgaaaagtacctaaggaattgtacctaagttttctcc 48954214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 51276748 - 51276695
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||    
T  51276748 tttagttaagaaccatacgaaaagcacctatgaaattatacctaaattttctcc 51276695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 3607782 - 3607730
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    |||||||||||||||||  ||||||| |||||||||| |||||||||||||||    
T  3607782 tttagttaagaaccatacaaaaagcacctaagaaattctacctaaattttctc 3607730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 345
Target Start/End: Complemental strand, 14387068 - 14387017
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttct 345  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||| ||||||    
T  14387068 tttagttaagaaccatacgaaatgcatctaaggaattgtacctaagttttct 14387017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 22339096 - 22339151
Alignment:
Q  288 tgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaatttt 343  Q
    |||||||||||||||||||||||||||||||| ||||  ||||| |||||| ||||    
T  22339096 tgtatttttagttaagaaccatatgaaaagcacctaaagaattgcacctaagtttt 22339151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 25297966 - 25298020
Alignment:
Q  295 ttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
    |||||||||||||||| ||||| || ||||| |||||||||||| ||||||||||    
T  25297966 ttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctccat 25298020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 362475 - 362528
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||| |||| |||||||| ||||  |||||||||||||||||||||    
T  362475 tttagttaagaatcatacgaaaagcacctaaagaattgtacctaaattttctcc 362528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 36880350 - 36880289
Alignment:
Q  286 tatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||| |||||||| ||||| ||  ||| ||||||||||||| ||||||||    
T  36880350 tatgtatttttagttaggaaccatacgaaaaacacttaaaaaattgtacctaagttttctcc 36880289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 15324745 - 15324796
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttct 345  Q
    ||||||||||||||||| ||||||||  |||| |||||||| ||||||||||    
T  15324745 tttagttaagaaccatacgaaaagcacataaggaattgtacataaattttct 15324796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 349
Target Start/End: Complemental strand, 27926304 - 27926249
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
    ||||||||||||||||| ||||||||  |||| |||| ||||||| ||||||||||    
T  27926304 tttagttaagaaccatacgaaaagcacataaggaattatacctaagttttctccat 27926249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 36880644 - 36880584
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgtta 273  Q
    ||||||||||||||||  |||  |||||| |||||||||| |||||||| |||||||||||||    
T  36880644 atggttcttaactaaaaatac--catgatttcctcaaatccataattttctcaaagtttgtta 36880584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 19954964 - 19954911
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||| ||| ||||||||  |||| |||||||||||| ||||||||    
T  19954964 tttagttaagaactatacgaaaagcacataaggaattgtacctaagttttctcc 19954911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 343
Target Start/End: Original strand, 28823219 - 28823272
Alignment:
Q  290 tatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaatttt 343  Q
    |||||||||||||||||||||  |||| |  ||||||||||||| |||||||||    
T  28823219 tatttttagttaagaaccatacaaaaaactcctaagaaattgtatctaaatttt 28823272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 40647236 - 40647289
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||| || |||| |||||||| ||||| |||||||||||| ||||||||    
T  40647236 tttagttaaaaatcatacgaaaagcacctaaggaattgtacctaagttttctcc 40647289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 42561348 - 42561295
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| |||||||| |||  |||||||    
T  42561348 tttagttaagaaccatacgaaaagcacctaaggaattgtacttaagatttctcc 42561295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 49284347 - 49284298
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaatttt 343  Q
    |||||||||||||||||  |||| || |||||||||||||||||| ||||    
T  49284347 tttagttaagaaccatacaaaaaacaactaagaaattgtacctaagtttt 49284298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 51789650 - 51789597
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||| ||||||| ||||| || ||||| |||||||||||| ||||||||    
T  51789650 tttagttaaaaaccatacgaaaatcacctaaggaattgtacctaagttttctcc 51789597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 29598450 - 29598393
Alignment:
Q  217 cttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatat 276  Q
    ||||||||||||  ||| ||||| |||| ||||| |||||||| ||||||||||||||||    
T  29598450 cttaactaaatt--cactatgatttccttaaatccataattttctcaaagtttgttatat 29598393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 333
Target Start/End: Complemental strand, 35547754 - 35547714
Alignment:
Q  293 ttttagttaagaaccatatgaaaagcatctaagaaattgta 333  Q
    ||||||||||||||||||| |||||||  ||||||||||||    
T  35547754 ttttagttaagaaccatataaaaagcacataagaaattgta 35547714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 8e-31; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 215 - 347
Target Start/End: Original strand, 20184280 - 20184410
Alignment:
Q  215 ttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaa 314  Q
    ||||||||||||||  ||||||||| |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||| |||| |||    
T  20184280 ttcttaactaaatt--caccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaatcatacgaa 20184377  T
Q  315 aagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||| ||||| |||||||||||| ||||||||    
T  20184378 aagcagctaaggaattgtacctaagttttctcc 20184410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 24836153 - 24836020
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||||| ||||||||||||||||||       ||||||||||||||| |||||||||    
T  24836153 atggttcttaactaaatt--caccatgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttnagaaccata 24836057  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| ||||| |||||||||||| ||||||||    
T  24836056 cgaaaagcacctaagcaattgtacctaagttttctcc 24836020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 213 - 347
Target Start/End: Original strand, 10936510 - 10936641
Alignment:
Q  213 ggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatg 312  Q
    ||||||||||||||||  ||||||||  ||||||||||||||||||| ||||||||||||||| ||       ||||||||||||||||||||||||| |    
T  10936510 ggttcttaactaaatt--caccatgacttcctcaaatctataattttctcaaagtttgttataaccaaaaaa-tatgtatttttagttaagaaccatacg 10936606  T
Q  313 aaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||| ||||| |||||||||||| ||||||||    
T  10936607 aaaagcacctaaggaattgtacctaagttttctcc 10936641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 31231652 - 31231787
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatc-cnnnnnnntatgtatttttagttaagaaccat 309  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||||| ||||||||||||||||  |       ||||||||||||||||||||||||    
T  31231652 atggttcttaactaaatt--caccatgatttcctcaaatccataattttctcaaagtttgttatatgtccaaaaaatatgtatttttagttaagaaccat 31231749  T
Q  310 atgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    | |||||||| ||||| |||||||||||| ||||||||    
T  31231750 acgaaaagcacctaaggaattgtacctaagttttctcc 31231787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 30594826 - 30594693
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||||| ||||||||||||||||||       ||||||||||||||||||||| ||     
T  30594826 atggttcttaactaaatt--caccatgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaactatg 30594730  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| ||||| |||||||||||| ||||||||    
T  30594729 cgaaaagcacctaaggaattgtacctaagttttctcc 30594693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 234 - 347
Target Start/End: Complemental strand, 38883333 - 38883221
Alignment:
Q  234 catgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgta 333  Q
    |||||| |||||||||| |||||||| ||||||||||||||||||       ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  38883333 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagcatctaaggaattgta 38883235  T
Q  334 cctaaattttctcc 347  Q
    ||||| ||||||||    
T  38883234 cctaagttttctcc 38883221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 211 - 348
Target Start/End: Complemental strand, 34052412 - 34052278
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||||||| |||||||  ||||||||| |||||||||  |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  34052412 atggttcttagctaaatt--caccatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 34052316  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
     |||||||| ||||| || ||||||||| |||||||||    
T  34052315 cgaaaagcacctaaggaaatgtacctaagttttctcca 34052278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 9285752 - 9285885
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||| ||||||  ||||||||| ||||||||| ||||||||| ||||||||||||||||||       |||||||||||| ||||||||||||    
T  9285752 atggttcttaattaaatt--caccatgatttcctcaaatttataattttatcaaagtttgttatatcc-aaaaaatatgtatttttatttaagaaccata 9285848  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||| | ||||  |||||||||||||||||||||    
T  9285849 cgaaaagtacctaaagaattgtacctaaattttctcc 9285885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 9289819 - 9289952
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||| ||||||  ||||||||| ||||||||| ||||||||| ||||||||||||||||||       |||||||||||| ||||||||||||    
T  9289819 atggttcttaattaaatt--caccatgatttcctcaaatttataattttatcaaagtttgttatatcc-aaaaaatatgtatttttatttaagaaccata 9289915  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||| | ||||  |||||||||||||||||||||    
T  9289916 cgaaaagtacctaaagaattgtacctaaattttctcc 9289952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 30259104 - 30259237
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| | |||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  30259104 atggttcttaactaaatt--caccatgattttctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccata 30259200  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
      ||||||| | ||| |||||||||||| ||||||||    
T  30259201 caaaaagcacccaaggaattgtacctaagttttctcc 30259237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 37093901 - 37093768
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||| |||||||||||  ||||||||| ||||||||| ||||||||| ||||||||||||||||||       ||| |||||||| ||||||| ||||    
T  37093901 atggtttttaactaaatt--caccatgatttcctcaaatttataattttctcaaagtttgttatatcc-aaaaaatatatatttttaattaagaatcata 37093805  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||  | |||||||||||||||||||||||||||    
T  37093804 cgaaaaatacctaagaaattgtacctaaattttctcc 37093768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 211 - 349
Target Start/End: Original strand, 3953080 - 3953215
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||| |||||||||||  ||||||||| |||||||||| ||||||||  |||||||||||||||||       |||||||||||||||||||||||||    
T  3953080 atggtttttaactaaatt--caccatgatttcctcaaatccataattttcacaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccata 3953176  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
      ||||| | ||||| ||||||| |||| ||||||||||    
T  3953177 caaaaagtacctaagtaattgtatctaagttttctccat 3953215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 211 - 348
Target Start/End: Original strand, 39617879 - 39618013
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| ||||| |||| |||||||| ||||||||||||||||||       ||| ||||||||||||||||| |||    
T  39617879 atggttcttaactaaatt--caccatgatttcctccaatccataattttctcaaagtttgttatatccaaaaaaatatttatttttagttaagaactata 39617976  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
     |||||||| ||||  ||||||| |||| |||||||||    
T  39617977 cgaaaagcacctaaagaattgta-ctaagttttctcca 39618013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 349
Target Start/End: Complemental strand, 12142323 - 12142190
Alignment:
Q  214 gttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatga 313  Q
    |||||||||||||||  ||||||||| | |||||||| |||||||| |||||| |||||||||||       ||| |||||||||||||||||||||       
T  12142323 gttcttaactaaatt--caccatgattttctcaaatccataattttctcaaagattgttatatccaaaaatatatatatttttagttaagaaccataccc 12142226  T
Q  314 aaagcatctaagaaattgtacctaaattttctccat 349  Q
    ||||||  |||| |||||||||||| ||||||||||    
T  12142225 aaagcacgtaaggaattgtacctaagttttctccat 12142190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 345
Target Start/End: Original strand, 35339316 - 35339447
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  || |||||| || ||||||| |||||||| ||||||||||||||||||       |||||||||||| ||||||||||||    
T  35339316 atggttcttaactaaatt--catcatgatttcttcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttatttaagaaccata 35339412  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttct 345  Q
     |||||| |  |||| |||||||||||| ||||||    
T  35339413 cgaaaagtacataaggaattgtacctaagttttct 35339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 355
Target Start/End: Original strand, 38883335 - 38883400
Alignment:
Q  290 tatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccattctttt 355  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||| ||||    
T  38883335 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctccattttttt 38883400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 45997546 - 45997679
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||||| ||||||||| ||||||||       |||||||||||||||||||||||||    
T  45997546 atggttcttaactaaatt--caccatgatttcctcaaatccataattttctcaaagtttattatatcc-aaaaaatatgtatttttagttaagaaccata 45997642  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
       ||| || ||||| ||||| |||||  ||||||||    
T  45997643 cctaaaacacctaaggaattgcacctaggttttctcc 45997679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 48103498 - 48103368
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||     | |||| |||||||||| |||||  | ||||||||||||||||||       |||||||||||||||||||| ||||    
T  48103498 atggttcttaactaaatt-----cgtgatttcctcaaatccataataatctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaatcata 48103405  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     ||||| || |||||||||||||||||| ||||||||    
T  48103404 cgaaaaacacctaagaaattgtacctaagttttctcc 48103368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 38528522 - 38528583
Alignment:
Q  286 tatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  38528522 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 38528583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 347
Target Start/End: Original strand, 25742497 - 25742602
Alignment:
Q  241 tcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaat 340  Q
    |||||||||| |||||||| ||||||||||||||||||       ||||||||||||||||| ||||||| ||||||||  |||||||||| || ||| |    
T  25742497 tcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaacaaccatacgaaaagcacttaagaaattgcacttaagt 25742595  T
Q  341 tttctcc 347  Q
    |||||||    
T  25742596 tttctcc 25742602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 47237539 - 47237599
Alignment:
Q  287 atgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||||||||||| |||||||| || ||||||||||||||| ||||||||    
T  47237539 atgtatttttagttaagaaccatacgaaaagcaccttagaaattgtacctaagttttctcc 47237599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 35665691 - 35665633
Alignment:
Q  289 gtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  35665691 gtatttttagttaagaaccatacgaaaagcacctaagcaattgtacctaagttttctcc 35665633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 35665696 - 35665786
Alignment:
Q  255 attttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    ||||| ||||||||||||||||||       ||||||||||||||||| ||||||| |||||||| ||||| |||||||||||| |||||||    
T  35665696 attttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaaaaaccatacgaaaagcacctaaggaattgtacctaagttttctc 35665786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 31521578 - 31521527
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  31521578 tttagttaagaaccatacgaaaagcatctaagaaattgta-ctaaattttctc 31521527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 24836138 - 24836192
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| |||||||||    
T  24836138 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcca 24836192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 35339331 - 35339278
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  35339331 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 35339278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 38528451 - 38528394
Alignment:
Q  286 tatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaatttt 343  Q
    |||||||||||||||||||||||||  |||||||| |||| |||||||||||| ||||    
T  38528451 tatgtatttttagttaagaaccatacaaaaagcatttaaggaattgtacctaactttt 38528394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 39617894 - 39617841
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||| ||||||||    
T  39617894 tttagttaagaaccatacgaagaacatctaagaaattgtacctaagttttctcc 39617841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 316
Target Start/End: Complemental strand, 40358244 - 40358146
Alignment:
Q  215 ttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaa 314  Q
    ||||||||||||||  ||||||||| |||||||||  |||||||| |||||||||||||||| |       |||| |||||||||||||||||||| |||    
T  40358244 ttcttaactaaatt--caccatgatttcctcaaattcataattttctcaaagtttgttatat-caaaaaaatatgcatttttagttaagaaccatacgaa 40358148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 30594811 - 30594855
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaa 338  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||    
T  30594811 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaa 30594855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 278
Target Start/End: Original strand, 31521563 - 31521628
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatcc 278  Q
    |||||||||||||||||||||  |||||| | |||||||  |||||||||||||||||| ||||||||    
T  31521563 atggttcttaactaaatttac--catgattttctcaaattcataattttttcaaagtttattatatcc 31521628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 33721879 - 33721827
Alignment:
Q  295 ttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  33721879 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 33721827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 11486912 - 11486873
Alignment:
Q  299 ttaagaaccatatgaaaagcatctaagaaattgtacctaa 338  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  11486912 ttaagaaccatacgaaaagcatctaagaaattgtacctaa 11486873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 349
Target Start/End: Complemental strand, 20184291 - 20184236
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
    |||||||||||| |||| |||||||| ||||| |||||||||||| ||||||||||    
T  20184291 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctccat 20184236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 17101700 - 17101746
Alignment:
Q  302 agaaccatatgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||    
T  17101700 agaaccatacgaaaagcacctaagaaattgtacctaagttttctcca 17101746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 24123815 - 24123898
Alignment:
Q  235 atgatctcctcaaatctataattttttcaaagtttgttatatcc-nnnnnnntatgtatttttagttaagaaccatatgaaaag 317  Q
    ||||| |||||||||| |||||||| ||||||||||||||||||        |||||||||||| |||||||||||| ||||||    
T  24123815 atgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaaatatgtatttttaattaagaaccatacgaaaag 24123898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 31231667 - 31231613
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    |||||||||||||||||  ||||||| ||||| |||||||||||| |||||||||    
T  31231667 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcca 31231613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 347
Target Start/End: Complemental strand, 17101699 - 17101654
Alignment:
Q  302 agaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||    
T  17101699 agaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 17101654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 25742488 - 25742435
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| ||||| || |||||||||||||| ||| ||||||||    
T  25742488 tttagttaagaaccataggaaaaacacctaagaaattgtacataagttttctcc 25742435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 30259119 - 30259070
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaatttt 343  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| ||||    
T  30259119 tttagttaagaaccataggaaaagcacctaaggaattgtacctaagtttt 30259070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 34052397 - 34052450
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||| ||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  34052397 tttagctaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 34052450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 39143750 - 39143877
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||| ||||||||  |||||| || |||||||||| ||||| || ||||||||||||||||         ||| ||| | |||||||||||||||    
T  39143750 atggttcttgactaaatt--caccataatttcctcaaatccataatattctcaaagtttgttatat-------aatatatatatatagttaagaaccata 39143840  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     ||||| || ||||  |||||||||||| ||||||||    
T  39143841 cgaaaaacacctaatgaattgtacctaagttttctcc 39143877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 29277897 - 29277837
Alignment:
Q  288 tgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    |||||||||||||||||||||||  ||||| | ||||  |||||||||||| |||||||||    
T  29277897 tgtatttttagttaagaaccatacaaaaagtacctaaagaattgtacctaagttttctcca 29277837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 349
Target Start/End: Complemental strand, 10936523 - 10936468
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
    |||||||||||||| || |||||||| ||||| |||||||| ||| ||||||||||    
T  10936523 tttagttaagaaccgtacgaaaagcacctaaggaattgtacataagttttctccat 10936468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 24123813 - 24123754
Alignment:
Q  289 gtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    ||||||||||||| ||||||||  ||||| |  |||| ||||||||||||||||||||||    
T  24123813 gtatttttagttaggaaccatacaaaaagtacataaggaattgtacctaaattttctcca 24123754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 37093886 - 37093937
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttct 345  Q
    ||||||||| ||||||| |||||| | ||||||||||||| |||||||||||    
T  37093886 tttagttaaaaaccatacgaaaagtacctaagaaattgtatctaaattttct 37093937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 1403032 - 1402990
Alignment:
Q  233 ccatgatctcctcaaatctataattttttcaaagtttgttata 275  Q
    ||||||| ||||||||||||||||||| ||||| |||||||||    
T  1403032 ccatgatttcctcaaatctataattttctcaaaatttgttata 1402990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 45997561 - 45997507
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    |||||||||||||||||  |||||||  || |||||||||||||| |||||||||    
T  45997561 tttagttaagaaccatacaaaaagcacatatgaaattgtacctaagttttctcca 45997507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 2826493 - 2826453
Alignment:
Q  286 tatgtatttttagttaagaaccatatgaaaagcatctaaga 326  Q
    ||||||||||||||||| ||  |||||||||||||||||||    
T  2826493 tatgtatttttagttaaaaattatatgaaaagcatctaaga 2826453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 39143765 - 39143713
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    |||||| |||||||||| |||||||||| ||  |||||||||||| |||||||    
T  39143765 tttagtcaagaaccatacgaaaagcatccaatgaattgtacctaagttttctc 39143713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 8e-31; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 4890518 - 4890652
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||||||||||||||||||  |||||| |||||||||  |||||||| ||||||||||||||||||       ||||  |||||||||||||||||||    
T  4890518 atggttcttaactaaatttac--catgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaaatatgcgtttttagttaagaaccata 4890615  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| ||||| |||||||||||||||||||||    
T  4890616 cgaaaagcacctaaggaattgtacctaaattttctcc 4890652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 13439829 - 13439695
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||||| ||||||||||||||||||       ||||||||||||| |||||||||||    
T  13439829 atggttcttaactaaatt--caccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagctaagaaccata 13439732  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||| |  |||| |||||||||||| ||||||||    
T  13439731 cgaaaagtacttaaggaattgtacctaagttttctcc 13439695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 21379979 - 21380112
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||  |||||||| |||| |||||||||||||       |||||||||||||||||||||||||    
T  21379979 atggttcttaactaaatt--caccatgatttcctcaaattcataattttctcaatgtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 21380075  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| ||||| |||||||||||| ||||||||    
T  21380076 cgaaaagcacctaaggaattgtacctaagttttctcc 21380112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 211 - 346
Target Start/End: Complemental strand, 8091195 - 8091063
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  |||| |||| |||| ||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  8091195 atggttcttaactaaatt--caccgtgatttccttaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 8091099  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctc 346  Q
     |||||||| ||||| ||||||| ||||||||||||    
T  8091098 cgaaaagcacctaaggaattgtatctaaattttctc 8091063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 234 - 348
Target Start/End: Original strand, 11687202 - 11687315
Alignment:
Q  234 catgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgta 333  Q
    |||||| |||||||||| |||||||| |||||||||||||||||        ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  11687202 catgatttcctcaaatccataattttctcaaagtttgttatatc-aaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgta 11687300  T
Q  334 cctaaattttctcca 348  Q
    ||||| |||||||||    
T  11687301 cctaagttttctcca 11687315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 15546765 - 15546632
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||| |||||||||  |||||| |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  15546765 atggttcttaattaaatttac--catgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccata 15546669  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
      |||| || ||||| |||||||||||| ||||||||    
T  15546668 caaaaaacaactaaggaattgtacctaagttttctcc 15546632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 345
Target Start/End: Original strand, 18998157 - 18998286
Alignment:
Q  214 gttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatga 313  Q
    |||||||||||||||  ||||||||| ||||| |||| |||||||| |||||||||||||||||        |||||||||||| |||||||||||| ||    
T  18998157 gttcttaactaaatt--caccatgatttcctcgaatccataattttctcaaagtttgttatatcaaaaaaaatatgtatttttaattaagaaccatacga 18998254  T
Q  314 aaagcatctaagaaattgtacctaaattttct 345  Q
    |||||| ||||| ||||||| |||||||||||    
T  18998255 aaagcacctaaggaattgtagctaaattttct 18998286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 215 - 347
Target Start/End: Complemental strand, 885514 - 885385
Alignment:
Q  215 ttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaa 314  Q
    ||||||||||||||  || |||||| | |||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||  ||    
T  885514 ttcttaactaaatt--catcatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccatacaaa 885418  T
Q  315 aagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||| ||||| |||||||||||| ||||||||    
T  885417 aagcacctaaggaattgtacctaagttttctcc 885385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 211 - 346
Target Start/End: Complemental strand, 7808742 - 7808610
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||  |||  |||||| ||||||||||||||||||| ||||||||||||||||||       ||||||||||||||||| ||||| |    
T  7808742 atggttcttaactaaaaatac--catgatttcctcaaatctataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaaaaaccaaa 7808646  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctc 346  Q
     ||||| || ||||| |||||||||||| |||||||    
T  7808645 cgaaaaacacctaaggaattgtacctaagttttctc 7808610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 211 - 334
Target Start/End: Complemental strand, 14393697 - 14393574
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatcc--nnnnnnntatgtatttttagttaagaacca 308  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||||| ||||||||||||||||||         |||||||||||||||||||| ||    
T  14393697 atggttcttaactaaatt--caccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaagaaatatgtatttttagttaagaatca 14393600  T
Q  309 tatgaaaagcatctaagaaattgtac 334  Q
    || |||||||| ||||| ||||||||    
T  14393599 tacgaaaagcacctaaggaattgtac 14393574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 349
Target Start/End: Complemental strand, 3369115 - 3368983
Alignment:
Q  214 gttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatga 313  Q
    |||| ||||||||||  ||||||||| |||||||||  |||||||| |||||||||||||||| |       ||||||||||||||||||||||||| ||    
T  3369115 gttcctaactaaatt--caccatgatttcctcaaattcataattttctcaaagtttgttatattcaaaaaa-tatgtatttttagttaagaaccatacga 3369019  T
Q  314 aaagcatctaagaaattgtacctaaattttctccat 349  Q
    |||||| ||||| ||||||||  || ||||||||||    
T  3369018 aaagcacctaaggaattgtactcaagttttctccat 3368983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 211 - 348
Target Start/End: Complemental strand, 20501839 - 20501705
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||  |||  |||||| || ||||||| |||||||| || |||||||||||||||       |||||||||||||||||||||||||    
T  20501839 atggttcttaactaaaaatac--catgatttcttcaaatccataattttctcgaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 20501743  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
     ||||| || ||||| ||||||| |||| |||||||||    
T  20501742 cgaaaaacacctaaggaattgtaactaagttttctcca 20501705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 211 - 343
Target Start/End: Original strand, 31764363 - 31764492
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  |||||| || | |||||||  |||||||| |||||||||||| |||||       ||||||| ||||||||||||| |||    
T  31764363 atggttcttaactaaatt--caccattattttctcaaattcataattttctcaaagtttgttgtatccaaaaaa-tatgtatctttagttaagaactata 31764459  T
Q  311 tgaaaagcatctaagaaattgtacctaaatttt 343  Q
     |||||| |||||||||||||||||||| ||||    
T  31764460 cgaaaagtatctaagaaattgtacctaagtttt 31764492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 11687200 - 11687143
Alignment:
Q  290 tatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||    
T  11687200 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 11687143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 7808722 - 7808779
Alignment:
Q  289 gtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    |||||||||||||||||||||| |||||||| ||||| |||||||||||| |||||||    
T  7808722 gtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 7808779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 211 - 348
Target Start/End: Complemental strand, 4238987 - 4238851
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatcc-nnnnnnntatgtatttttagttaagaaccat 309  Q
    ||||||||||| ||||||  ||||||||| | ||||||||  ||||||| ||||||||||||||||||        |||||||||||| || ||||||||    
T  4238987 atggttcttaattaaatt--caccatgattttctcaaatccttaattttctcaaagtttgttatatccaaaaaaaatatgtatttttaattgagaaccat 4238890  T
Q  310 atgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    |  |||||||  |||  ||||||| ||||||||||||||    
T  4238889 acaaaaagcacataaagaattgtatctaaattttctcca 4238851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 4890533 - 4890480
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| ||||| || |||||||||||||||||| ||||||||    
T  4890533 tttagttaagaaccatacgaaaaacacctaagaaattgtacctaagttttctcc 4890480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 6433743 - 6433690
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| |||||||||| ||||||| ||||||||    
T  6433743 tttagttaagaaccatacgaaaagcacctaagaaattatacctaagttttctcc 6433690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 8091180 - 8091233
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  8091180 tttagttaagaaccatacgaaaagcacctaagcaattgtacctaagttttctcc 8091233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 20501819 - 20501864
Alignment:
Q  289 gtatttttagttaagaaccatatgaaaagcatctaagaaattgtac 334  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||    
T  20501819 gtatttttagttaagaaccatacgaaaagcacctaagaaattgtac 20501864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 21379994 - 21379941
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  21379994 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 21379941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 343
Target Start/End: Complemental strand, 29609134 - 29609005
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||| |||||||||||  |||| |||| |||| ||||| |||||||| |||||||||||||| |||        |||||||||||||||||||||| |    
T  29609134 atggtttttaactaaatt--caccgtgatttccttaaatccataattttctcaaagtttgttatctccaaaaaag-atgtatttttagttaagaaccaca 29609038  T
Q  311 tgaaaagcatctaagaaattgtacctaaatttt 343  Q
     ||||||||  |||  |||||||||||| ||||    
T  29609037 cgaaaagcacttaaagaattgtacctaagtttt 29609005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 885503 - 885556
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||| |||| |||||||| ||||| |||||||||||| ||||||||    
T  885503 tttagttaagaatcataggaaaagcacctaaggaattgtacctaagttttctcc 885556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 316
Target Start/End: Original strand, 13172639 - 13172713
Alignment:
Q  241 tcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaa 316  Q
    |||||||||| |||||||| ||||||||||||||||||       |||||||||||| |||||||||||| |||||    
T  13172639 tcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttacttaagaaccatacgaaaa 13172713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 15546750 - 15546803
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||| |||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  15546750 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 15546803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 30905109 - 30905046
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatat 276  Q
    |||||| |||||||||||  || | |||||| ||||||||||||||||| ||||||||| ||||||    
T  30905109 atggtttttaactaaatt--catcgtgatctactcaaatctataattttctcaaagttttttatat 30905046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 13172627 - 13172574
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| ||||| ||||||   |||||||||||| ||||||||    
T  13172627 tttagttaagaaccatacgaaaaacatctagagaattgtacctaagttttctcc 13172574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 14393682 - 14393735
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||||  ||||||| ||||| |||| ||||||| ||||||||    
T  14393682 tttagttaagaaccatacaaaaagcacctaaggaattatacctaagttttctcc 14393735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 29609119 - 29609168
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaatttt 343  Q
    ||||||||| ||||||| |||||||||||||| |||||||| ||| ||||    
T  29609119 tttagttaaaaaccatacgaaaagcatctaaggaattgtacgtaagtttt 29609168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 350
Target Start/End: Complemental strand, 17279585 - 17279521
Alignment:
Q  286 tatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccatt 350  Q
    |||||||||||| |||||||||||| |||||  | |||||||||||||  ||| |||||| ||||    
T  17279585 tatgtatttttaattaagaaccatacgaaaaatacctaagaaattgtagataagttttcttcatt 17279521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 8e-31; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 211 - 348
Target Start/End: Original strand, 530707 - 530841
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  |||||| || |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  530707 atggttcttaactaaatt--caccatcatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 530803  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
     |||||||| ||||| |||||||||||| |||||||||    
T  530804 cgaaaagcacctaaggaattgtacctaagttttctcca 530841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 42274530 - 42274663
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||||| ||||||||||||||||||       ||| |||||||||||||||||||||    
T  42274530 atggttcttaactaaatt--caccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatatatttttagttaagaaccata 42274627  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctc 346  Q
     ||||| || ||||| |||||||||||| |||||||    
T  42274628 cgaaaaacacctaaggaattgtacctaagttttctc 42274663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 211 - 349
Target Start/End: Complemental strand, 55107657 - 55107522
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||| |||||||||||  |||||| |||||||||  |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  55107657 atggttctttactaaatttac--catgatttcctcaaatgcataattttctcaaagtttgttatatccaaataa-tatgtatttttagttaagaaccata 55107561  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
    |||||||||  |||| |||||||||||| ||||||||||    
T  55107560 tgaaaagcacataaggaattgtacctaagttttctccat 55107522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 1299045 - 1298912
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| | |||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  1299045 atggttcttaactaaatt--caccatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 1298949  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
      ||||||| ||||| |||||||||||| ||||||||    
T  1298948 caaaaagcacctaaggaattgtacctaagttttctcc 1298912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 211 - 346
Target Start/End: Complemental strand, 18417790 - 18417658
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||| ||||||  ||||||||| |||||||||| |||||||| ||||||||||||||||||       ||| |||||||||||||||||||||    
T  18417790 atggttcttaattaaatt--caccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccata 18417694  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctc 346  Q
     |||||||| ||||| |||||||||||| |||||||    
T  18417693 cgaaaagcacctaaggaattgtacctaagttttctc 18417658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 4552918 - 4552785
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  || |||||| |||||||||| |||||||| ||||||||||||||||||       ||| ||||||||||||| |||||||    
T  4552918 atggttcttaactaaatt--catcatgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatttatttttagttaaaaaccata 4552822  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||  |||| |||||||||||| ||||||||    
T  4552821 tgaaaagcacttaaggaattgtacctaagttttctcc 4552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 20435178 - 20435311
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  || |||||| |||||||||| |||||||| || |||||||||||||||       |||||||||||||||||||||||||    
T  20435178 atggttcttaactaaatt--catcatgatttcctcaaatccataattttctcgaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 20435274  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| ||||  |||||||||||| ||||||||    
T  20435275 cgaaaagcacctaaagaattgtacctaagttttctcc 20435311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 211 - 348
Target Start/End: Original strand, 24969579 - 24969716
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnnta--tgtatttttagttaagaacca 308  Q
    ||||||||||||||||||  ||||||||| |||||||||  |||||||| ||||||||||||||||||        |  ||||||||||||||||||| |    
T  24969579 atggttcttaactaaatt--caccatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaaaaaaatgtatttttagttaagaacta 24969676  T
Q  309 tatgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    || |||||||| ||||| |||||||||||| |||||||||    
T  24969677 tacgaaaagcacctaaggaattgtacctaagttttctcca 24969716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 4688285 - 4688418
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  |||  |||| |||||||||  | |||||| ||||||||||||||||||       |||||||||||| ||||||||||||    
T  4688285 atggttcttaactaaatt--cactgtgatttcctcaaattcacaattttctcaaagtttgttatatccaaaaaaatatgtatttttaattaagaaccata 4688382  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctc 346  Q
     ||||| |||||||| |||||||||||| |||||||    
T  4688383 cgaaaatcatctaaggaattgtacctaagttttctc 4688418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 218 - 347
Target Start/End: Original strand, 28809891 - 28810018
Alignment:
Q  218 ttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaag 317  Q
    |||||||||||| ||||||||| | |||||||| |||||||| ||||| ||||||||||||       ||||||||| |||||||||||||||  |||||    
T  28809891 ttaactaaattt-caccatgattttctcaaatccataattttctcaaaatttgttatatccaaaaaa-tatgtatttctagttaagaaccataccaaaag 28809988  T
Q  318 catctaagaaattgtacctaaattttctcc 347  Q
    || |||||||||||||||||| ||||||||    
T  28809989 cagctaagaaattgtacctaagttttctcc 28810018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 32318758 - 32318891
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||| ||| |||||||| ||||||||||||||||||       ||| |||||||| ||||||| ||||    
T  32318758 atggttcttaactaaatt--caccatgatttcctcagatccataattttctcaaagtttgttatatcc-aaaaaatatatatttttaattaagaatcata 32318854  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||| ||||  |||||||| ||||||||||||    
T  32318855 tgaaaagcacctaaagaattgtacttaaattttctcc 32318891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 27434743 - 27434610
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||||||||||||||||||  ||| || |||||||||  |||||||| ||||||||||||||||||        |||||||||||||||||||| |||    
T  27434743 atggttcttaactaaatttac--cataatttcctcaaattcataattttctcaaagtttgttatatccaaaaaaa-atgtatttttagttaagaactata 27434647  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
      |||||||  ||||||||||||||||| ||||||||    
T  27434646 caaaaagcacataagaaattgtacctaagttttctcc 27434610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 13204510 - 13204377
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||| |||||||||||  ||||||||| |||||||||| ||||||||  |||||||||||||||||       |||||||||||||||||||||||||    
T  13204510 atggtttttaactaaatt--caccatgatttcctcaaatccataattttcacaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccata 13204414  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
      ||||| | ||||| ||||||| |||| ||||||||    
T  13204413 caaaaagtacctaagtaattgtatctaagttttctcc 13204377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 347
Target Start/End: Complemental strand, 52824344 - 52824239
Alignment:
Q  241 tcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaat 340  Q
    |||||||||| |||||||| ||||||||| |||||||        ||||||||||||||||||||||||| |||||||| ||||| |||||||||||| |    
T  52824344 tcctcaaatccataattttctcaaagtttattatatc-taaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagt 52824246  T
Q  341 tttctcc 347  Q
    |||||||    
T  52824245 tttctcc 52824239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 35360809 - 35360677
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||| ||||| |||||||| |||||||||||||||| |       |||||||||||||||||||||||||    
T  35360809 atggttcttaactaaatt--caccatgatttccttaaatccataattttctcaaagtttgttatat-ctaaaaaatatgtatttttagttaagaaccata 35360713  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||  | |||| |||||||| |||| ||||||||    
T  35360712 cgaaaaatacctaataaattgta-ctaagttttctcc 35360677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 211 - 317
Target Start/End: Original strand, 21048743 - 21048845
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||||| || ||||||||||||||        |||||||||||||||||||||||||    
T  21048743 atggttcttaactaaatt--caccatgatttcctcaaatccataattttctcgaagtttgttatatc--aaaaaatatgtatttttagttaagaaccata 21048838  T
Q  311 tgaaaag 317  Q
     ||||||    
T  21048839 cgaaaag 21048845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 349
Target Start/End: Original strand, 23928609 - 23928740
Alignment:
Q  215 ttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaa 314  Q
    ||||||||||||||  ||||||||| |||||||||| |||||||| ||||| ||||||||||||        || |||||||||||||||| |||| | |    
T  23928609 ttcttaactaaatt--caccatgatttcctcaaatccataattttctcaaaatttgttatatccaaaaaaa-atatatttttagttaagaatcatacgca 23928705  T
Q  315 aagcatctaagaaattgtacctaaattttctccat 349  Q
    ||||| ||||| |||||||| ||| ||||||||||    
T  23928706 aagcacctaaggaattgtacataagttttctccat 23928740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 24915832 - 24915969
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatcc----nnnnnnntatgtatttttagttaagaac 306  Q
    ||||||||||||||||||  ||||||||| | |||||||| |||||||| ||||||||||||||||||           |||||||||||||||||||||    
T  24915832 atggttcttaactaaatt--caccatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaaaataatatgtatttttagttaagaac 24915929  T
Q  307 catatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||   ||||| |  ||||||||||||||||| ||||||||    
T  24915930 cat-caaaaagtacataagaaattgtacctaagttttctcc 24915969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 11330164 - 11330106
Alignment:
Q  289 gtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  11330164 gtattttcagttaagaatcatatgaaaagcatctaagaaattgtatctaagttttctcc 11330106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 348
Target Start/End: Complemental strand, 2272499 - 2272366
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||||||| |||||||  ||||||||| |||| ||||| |||||||| |||||||||||| |||||       | |||| ||||||||||||||||||    
T  2272499 atggttcttagctaaatt--caccatgatttccttaaatccataattttatcaaagtttgttctatccaaaaaaat-tgta-ttttagttaagaaccata 2272404  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    | ||||||| |||| |||||||| |||| |||| ||||    
T  2272403 taaaaagcacctaaaaaattgtaactaagttttgtcca 2272366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 42274545 - 42274492
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| ||||||||    
T  42274545 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 42274492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 4688300 - 4688248
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    ||||||||||||||||| |||||||| |||||||||||||||||| |||||||    
T  4688300 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctc 4688248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 1299030 - 1299083
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  1299030 tttagttaagaaccataagaaaagcacctaaggaattgtacctaagttttctcc 1299083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 21048758 - 21048705
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||||||||  |||||||||||| ||||||||    
T  21048758 tttagttaagaaccatacgaaaagcatctaacgaattgtacctaagttttctcc 21048705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 24915847 - 24915794
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  24915847 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 24915794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 55049441 - 55049503
Alignment:
Q  214 gttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatcc 278  Q
    |||||||||||||||  ||| ||||| |||||||| | |||||||||||||||||||||||||||    
T  55049441 gttcttaactaaatt--cactatgatttcctcaaacccataattttttcaaagtttgttatatcc 55049503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 349
Target Start/End: Complemental strand, 20435193 - 20435138
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
    ||||||||||||||||| |||||||||||||| |||||||  ||| ||||||||||    
T  20435193 tttagttaagaaccatacgaaaagcatctaaggaattgtatataagttttctccat 20435138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 349
Target Start/End: Original strand, 27434728 - 27434783
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
    ||||||||||||||||| |||||||| ||||| |||||||| ||| ||||||||||    
T  27434728 tttagttaagaaccatacgaaaagcacctaaggaattgtacttaagttttctccat 27434783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 4895101 - 4895042
Alignment:
Q  215 ttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatat 276  Q
    |||||||||||||||||  |||||| |||||||||  |||||||| ||||||||||||||||    
T  4895101 ttcttaactaaatttac--catgatttcctcaaattcataattttctcaaagtttgttatat 4895042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 350
Target Start/End: Complemental strand, 28574006 - 28573944
Alignment:
Q  288 tgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccatt 350  Q
    |||||||| || ||||||||||  |||||||| ||||| |||||||||||| |||||||||||    
T  28574006 tgtattttaaggtaagaaccatgcgaaaagcacctaagtaattgtacctaagttttctccatt 28573944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 530722 - 530669
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||||  ||||||| ||||| |||||||||||| ||||||||    
T  530722 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 530669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 3422482 - 3422429
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||| |||||||| ||| |||||||| |||||||||||||||||| ||||||||    
T  3422482 tttaattaagaactatacgaaaagcacctaagaaattgtacctaagttttctcc 3422429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 43486253 - 43486200
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||| | ||||| |||||||||||| ||||||||    
T  43486253 tttagttaagaaccataggaaaagtacctaaggaattgtacctaagttttctcc 43486200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 56552194 - 56552132
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttata 275  Q
    ||||||||||| |||||| ||  |||||| |||||||||| |||||||| |||||||||||||||    
T  56552194 atggttcttaaataaattaac--catgatttcctcaaatccataattttctcaaagtttgttata 56552132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 9355606 - 9355566
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtac 334  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  9355606 tttagttaagaaccatatgaaaagcacctaaggaattgtac 9355566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 319
Target Start/End: Complemental strand, 24294600 - 24294495
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  |||||| || |||||||||   ||||||| |||||||||||||||| |       |||||||||||| ||||||| ||||    
T  24294600 atggttcttaactaaatt--caccataatttcctcaaattcgtaattttctcaaagtttgttatat-caaaaaaatatgtatttttaattaagaatcata 24294504  T
Q  311 tgaaaagca 319  Q
     ||||||||    
T  24294503 cgaaaagca 24294495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 32318773 - 32318721
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    ||||||||||||||||| ||||||||  |||| |||||||||||| |||||||    
T  32318773 tttagttaagaaccatacgaaaagcacataaggaattgtacctaagttttctc 32318721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 350
Target Start/End: Original strand, 3113168 - 3113227
Alignment:
Q  291 atttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccatt 350  Q
    |||||||||||||||  ||| || || || |||| |||||||||||||||||||||||||    
T  3113168 atttttagttaagaataatacgacaaacacctaaaaaattgtacctaaattttctccatt 3113227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 345
Target Start/End: Complemental strand, 24969594 - 24969543
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttct 345  Q
    ||||||||||||||||| |||||||| ||||  |||||||||||| ||||||    
T  24969594 tttagttaagaaccatacgaaaagcacctaaagaattgtacctaagttttct 24969543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 55049453 - 55049399
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    ||||||||||||| ||| |||||||| ||||| |||||||| ||| |||||||||    
T  55049453 tttagttaagaactatacgaaaagcacctaaggaattgtacataagttttctcca 55049399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 4552903 - 4552956
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||||   ||||||| |||| |||||||||||| ||||||||    
T  4552903 tttagttaagaaccatacagaaagcatataaggaattgtacctaagttttctcc 4552956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 18417775 - 18417828
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||| ||||||||||||  ||||||| ||||| |||||||||||| ||||||||    
T  18417775 tttaattaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 18417828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 28809899 - 28809846
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||| ||| |||  ||||||| |||||||||||||||||| ||||||||    
T  28809899 tttagttaaaaacaataccaaaagcacctaagaaattgtacctaagttttctcc 28809846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 37525059 - 37525112
Alignment:
Q  292 tttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttct 345  Q
    ||||||||||||||||| | |||||||| ||||  |||||||||||| ||||||    
T  37525059 tttttagttaagaaccacacgaaaagcacctaaagaattgtacctaagttttct 37525112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 343
Target Start/End: Original strand, 47465098 - 47465151
Alignment:
Q  290 tatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaatttt 343  Q
    ||||||||||||| || ||||||||||||| ||||  |||||||||||| ||||    
T  47465098 tatttttagttaaaaatcatatgaaaagcacctaaagaattgtacctaagtttt 47465151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 55107642 - 55107695
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||| ||||||||||  ||||||| ||||| |||||||||||| ||||||||    
T  55107642 tttagtaaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcc 55107695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 9355591 - 9355652
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttat 274  Q
    ||||||||||||||||||  ||||||||| |||| ||||| |||||||| ||| | ||||||||    
T  9355591 atggttcttaactaaatt--caccatgatttccttaaatccataattttctcagaatttgttat 9355652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 36030992 - 36030932
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccattcttt 354  Q
    |||||||||||| |||| ||||||||  |||| |||||||||||| |||||| | ||||||    
T  36030992 tttagttaagaaacatacgaaaagcacgtaaggaattgtacctaacttttcttctttcttt 36030932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 274
Target Start/End: Complemental strand, 44588741 - 44588713
Alignment:
Q  246 aaatctataattttttcaaagtttgttat 274  Q
    |||||||||||||||||||||||||||||    
T  44588741 aaatctataattttttcaaagtttgttat 44588713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 8e-31; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 1924018 - 1924152
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| ||||| |||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  1924018 atggttcttaactaaatt--caccatgatttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccata 1924115  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     ||||| || ||||| |||||||||||| ||||||||    
T  1924116 cgaaaaacacctaaggaattgtacctaagttttctcc 1924152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 9933607 - 9933740
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| | |||||||| |||||||| ||||||||| |||||||        |||||||||||||||||||||||||    
T  9933607 atggttcttaactaaatt--caccatgattttctcaaatccataattttctcaaagtttattatatc-taaaaaatatgtatttttagttaagaaccata 9933703  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| |||||||||||||||||||||||||||    
T  9933704 cgaaaagcacctaagaaattgtacctaaattttctcc 9933740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 211 - 350
Target Start/End: Original strand, 12850580 - 12850716
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||| ||||||||||||||  |||||| |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  12850580 atggtttttaactaaatttac--catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 12850676  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctccatt 350  Q
     ||||||||||| || ||||| |||||| |||||||||||    
T  12850677 cgaaaagcatctgaggaattggacctaagttttctccatt 12850716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 211 - 349
Target Start/End: Original strand, 24101870 - 24102005
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||| |||  |||||| |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  24101870 atggttcttaactaaatatac--catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 24101966  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
     |||||||| ||||| |||||||| ||| ||||||||||    
T  24101967 cgaaaagcacctaaggaattgtacttaagttttctccat 24102005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 23836010 - 23835876
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||| ||||| ||||||||  |||||| |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  23836010 atggtttttaacaaaatttac--catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccata 23835913  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| ||||| |||||||| ||| ||||||||    
T  23835912 cgaaaagcacctaaggaattgtacataagttttctcc 23835876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 215 - 346
Target Start/End: Complemental strand, 7737194 - 7737065
Alignment:
Q  215 ttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaa 314  Q
    |||||||||||||||||  |||||| |||||||| | |||||||| ||||||||||||||||||       |||||||||||||||||||| ||||  ||    
T  7737194 ttcttaactaaatttac--catgatttcctcaaagccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaatcataccaa 7737097  T
Q  315 aagcatctaagaaattgtacctaaattttctc 346  Q
    ||||| |||||||||||||||||| |||||||    
T  7737096 aagcacctaagaaattgtacctaagttttctc 7737065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 27920705 - 27920573
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||||||||||||||||||||||||       |||||| |||||||||||| |||||    
T  27920705 atggttcttaactaaatt--caccatgatttcctcaaatccataattttttcaaagtttgttatatcc-aaaaaatatgtagttttagttaagacccata 27920609  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| ||||||||||||| |||| ||||||||    
T  27920608 cgaaaagcacctaagaaattgta-ctaagttttctcc 27920573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 347
Target Start/End: Complemental strand, 20892987 - 20892884
Alignment:
Q  244 tcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaatttt 343  Q
    ||||||| |||||||| ||||||||||||||||||       ||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||    
T  20892987 tcaaatccataattttctcaaagtttgttatatccataaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagtttt 20892888  T
Q  344 ctcc 347  Q
    ||||    
T  20892887 ctcc 20892884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 42713815 - 42713949
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| | |||||||| |||||||| ||||||||| ||||||||       |||||||||||||||||||| |||     
T  42713815 atggttcttaactaaatt--caccatgattttctcaaatccataattttctcaaagtttattatatccaaaaaaatatgtatttttagttaagaatcatg 42713912  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     ||||||||  ||||||||||||||||| ||||||||    
T  42713913 cgaaaagcacttaagaaattgtacctaagttttctcc 42713949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 241 - 350
Target Start/End: Complemental strand, 34455990 - 34455882
Alignment:
Q  241 tcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaat 340  Q
    ||||||||||||||||||| ||||||||||||||||||       |||||||||||| |||||||||||| |||||||| ||||| |||||||||||| |    
T  34455990 tcctcaaatctataattttctcaaagtttgttatatccaaaaaa-tatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtacctaagt 34455892  T
Q  341 tttctccatt 350  Q
    ||||||||||    
T  34455891 tttctccatt 34455882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 45408758 - 45408625
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||| |||||||||  |||||| |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  45408758 atggttcttaattaaatttac--catgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccata 45408662  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
      |||| || ||||| |||||||||||| ||||||||    
T  45408661 caaaaaacacctaaggaattgtacctaagttttctcc 45408625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 211 - 338
Target Start/End: Complemental strand, 2818799 - 2818675
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||||| |||||||||| |||||||       |||||||||||||||||||| ||||    
T  2818799 atggttcttaactaaatt--caccatgatttcctcaaatccataattttctcaaagtttgatatatcc-aaaaaatatgtatttttagttaagaatcata 2818703  T
Q  311 tgaaaagcatctaagaaattgtacctaa 338  Q
     |||||||| ||||| ||||||||||||    
T  2818702 cgaaaagcacctaaggaattgtacctaa 2818675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 9281385 - 9281518
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||| ||||| |||||||||  |||||||| ||||||||||||||||||       ||| |||||||||||||||||||||    
T  9281385 atggttcttaactaaatt--cactatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccata 9281481  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||| | ||||| |||||||||||| ||||||||    
T  9281482 cgaaaaggacctaaggaattgtacctaagttttctcc 9281518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 16705866 - 16705733
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||| |||||||||||  ||| ||||| | |||||| | |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  16705866 atggtttttaactaaatt--cactatgattttctcaaagccataattttatcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 16705770  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| ||||| |||||||||||| ||||||||    
T  16705769 cgaaaagcacctaaggaattgtacctaagttttctcc 16705733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 3117009 - 3116876
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||  ||||| | |||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  3117009 atggttcttaactaaatt--cattatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 3116913  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| | ||  |||||||||||| ||||||||    
T  3116912 cgaaaagcaccaaaagaattgtacctaagttttctcc 3116876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 34490589 - 34490456
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||  |||  |||||| |||||| ||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  34490589 atggttcttaactaaaaatac--catgatttcctcagatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 34490493  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     ||||| || ||||  |||||||||||| ||||||||    
T  34490492 cgaaaaacacctaaagaattgtacctaagttttctcc 34490456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 349
Target Start/End: Complemental strand, 22269834 - 22269720
Alignment:
Q  234 catgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgta 333  Q
    |||||| |||||||||| |||||||| ||||||||||||||||||       ||||||||||||||||| || |||| ||||| || ||||| |||||||    
T  22269834 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaaaaatcatacgaaaaacacctaaggaattgta 22269736  T
Q  334 cctaaattttctccat 349  Q
    ||||| ||||||||||    
T  22269735 cctaagttttctccat 22269720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 34490569 - 34490627
Alignment:
Q  289 gtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  34490569 gtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 34490627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 1924033 - 1923980
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  1924033 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctcc 1923980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 6605867 - 6605738
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||||||| ||||||||||  |||||| |||||||||  |||||||| ||||||||||||||||||       |||||||||||||||||||   |||    
T  6605867 atggttctta-ctaaatttac--catgatttcctcaaatgcataattttctcaaagtttgttatatcc-aaataatatgtatttttagttaaga---ata 6605775  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     ||||||||  |||| |||||||||||| ||||||||    
T  6605774 cgaaaagcacataaggaattgtacctaagttttctcc 6605738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 349
Target Start/End: Original strand, 16705851 - 16705906
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
    ||||||||| ||||||| |||||||| ||||| |||||||||||||||||||||||    
T  16705851 tttagttaaaaaccatacgaaaagcacctaaggaattgtacctaaattttctccat 16705906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 347
Target Start/End: Original strand, 22269838 - 22269893
Alignment:
Q  292 tttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||||| |||||||||||||| |||||||| ||| ||||||||    
T  22269838 tttttagttaagaaccatacgaaaagcatctaaggaattgtacgtaagttttctcc 22269893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 24101890 - 24101832
Alignment:
Q  289 gtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||| ||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  24101890 gtatatttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 24101832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 211 - 316
Target Start/End: Original strand, 9850796 - 9850897
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||||||||||||||||||  |||||| | || ||||| |||||||| ||||| |||||||||||        |||||||||||||||||||||||||    
T  9850796 atggttcttaactaaatttac--catgattttcttaaatccataattttctcaaaatttgttatatc--aaaaaatatgtatttttagttaagaaccata 9850891  T
Q  311 tgaaaa 316  Q
     |||||    
T  9850892 cgaaaa 9850897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 27920690 - 27920743
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||| ||||||||    
T  27920690 tttagttaagaaccatacgaaaagcagctaaaaaattgtacctaagttttctcc 27920743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 43858552 - 43858605
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||| | ||||| |||||||||||||||||||||    
T  43858552 tttagttaagaaccatacgaaaagtacctaaggaattgtacctaaattttctcc 43858605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 278
Target Start/End: Complemental strand, 43476079 - 43476014
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatcc 278  Q
    ||||||||||||||||||  ||||||||| |||||||||  |||||||| ||||||||| ||||||||    
T  43476079 atggttcttaactaaatt--caccatgatttcctcaaattcataattttctcaaagtttattatatcc 43476014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 350
Target Start/End: Original strand, 45408743 - 45408799
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccatt 350  Q
    |||| |||||||||||| |||||||| ||||| |||||||||||| |||||||||||    
T  45408743 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctccatt 45408799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 350
Target Start/End: Complemental strand, 7116503 - 7116367
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||| |||||||||  ||| || || ||||||| |||||||| |||||| ||||| |||||         ||||||||||||| |||||||||    
T  7116503 atggttcttaaataaatttac--cataatttcatcaaatccataattttctcaaagattgttctatccaacaaagg-tgtatttttagttgagaaccata 7116407  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctccatt 350  Q
     |||||| ||||||  |||||||||||| |||| ||||||    
T  7116406 cgaaaagtatctaaagaattgtacctaagttttgtccatt 7116367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 350
Target Start/End: Original strand, 29229422 - 29229537
Alignment:
Q  234 catgatctcctcaaatctataattttttcaaa-gtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgt 332  Q
    |||||| |||||||||| |||||||| ||||| |||| ||||||||       ||||||||||||||||||||||||| |||||| | ||||  ||||||    
T  29229422 catgatttcctcaaatccataattttctcaaaagtttattatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagtaactaaagaattgt 29229520  T
Q  333 acctaaattttctccatt 350  Q
    | |||| |||||||||||    
T  29229521 a-ctaagttttctccatt 29229537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 350
Target Start/End: Original strand, 29342722 - 29342837
Alignment:
Q  234 catgatctcctcaaatctataattttttcaaa-gtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgt 332  Q
    |||||| |||||||||| |||||||| ||||| |||| ||||||||       ||||||||||||||||||||||||| |||||| | ||||  ||||||    
T  29342722 catgatttcctcaaatccataattttctcaaaagtttattatatccaaaaaa-tatgtatttttagttaagaaccatacgaaaagtaactaaagaattgt 29342820  T
Q  333 acctaaattttctccatt 350  Q
    | |||| |||||||||||    
T  29342821 a-ctaagttttctccatt 29342837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 9281400 - 9281346
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    |||||||||||||||||||||||| | ||||| ||||||||| || |||||||||    
T  9281400 tttagttaagaaccatatgaaaagtacctaaggaattgtaccaaagttttctcca 9281346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 3116994 - 3117047
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||| | |||||||||||| ||||||||    
T  3116994 tttagttaagaaccatacgaaaagcagctatggaattgtacctaagttttctcc 3117047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 7737183 - 7737236
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||| |||| |||||||| ||||| |||||||||||| ||||||||    
T  7737183 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctcc 7737236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 43476064 - 43476117
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| ||||| || ||||| |||| ||||||||||||||||    
T  43476064 tttagttaagaaccatacgaaaaacacctaaggaattatacctaaattttctcc 43476117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 7116488 - 7116532
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaa 338  Q
    |||| |||||||||||| ||||| |||||||||||||||||||||    
T  7116488 tttatttaagaaccatacgaaaaacatctaagaaattgtacctaa 7116532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 8111692 - 8111747
Alignment:
Q  295 ttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccatt 350  Q
    ||||||||||||||||  ||||| | ||||||||||||| |||| |||||||||||    
T  8111692 ttagttaagaaccatacaaaaaggacctaagaaattgtaactaagttttctccatt 8111747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 2818784 - 2818838
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    ||||||||||||||||| ||||| || ||||  |||||||||||| |||||||||    
T  2818784 tttagttaagaaccatacgaaaaacacctaaagaattgtacctaagttttctcca 2818838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 40362615 - 40362553
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatat 276  Q
    ||||||||||||||||||  ||||||||| | |||||||| |||||||| ||| ||||||||||||    
T  40362615 atggttcttaactaaatt--caccatgattttctcaaatc-ataattttctcatagtttgttatat 40362553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 9933622 - 9933570
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||  |||||||||||| ||||||||    
T  9933622 tttagttaagaaccataggaaaagca-ctaatgaattgtacctaagttttctcc 9933570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 42713830 - 42713777
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| ||||| || ||||| |||| || |||||||||||||    
T  42713830 tttagttaagaaccatacgaaaaacacctaaggaattatatctaaattttctcc 42713777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 10552999 - 10553051
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    |||||||||||| |||| ||||| || ||||| |||||||||||| |||||||    
T  10552999 tttagttaagaatcatacgaaaaacacctaaggaattgtacctaagttttctc 10553051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 211 - 345
Target Start/End: Original strand, 24397284 - 24397415
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||||||||||||||| |||   |||| |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  24397284 atggttcttaactaaattcaca---tgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccata 24397380  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttct 345  Q
     |||||||| ||||| |||||||||||| ||||||    
T  24397381 cgaaaagcacctaaggaattgtacctaagttttct 24397415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 234 - 347
Target Start/End: Complemental strand, 15855955 - 15855843
Alignment:
Q  234 catgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgta 333  Q
    |||||| |||||||||| |||||||| |||||||||||||||||        ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  15855955 catgatttcctcaaatccataattttctcaaagtttgttatatc-aaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgta 15855857  T
Q  334 cctaaattttctcc 347  Q
    ||||| ||||||||    
T  15855856 cctaagttttctcc 15855843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 234 - 347
Target Start/End: Original strand, 35420671 - 35420783
Alignment:
Q  234 catgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgta 333  Q
    |||||| |||||||||| |||||||| |||||||||||||||||        ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  35420671 catgatttcctcaaatccataattttctcaaagtttgttatatc-aaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgta 35420769  T
Q  334 cctaaattttctcc 347  Q
    ||||| ||||||||    
T  35420770 cctaagttttctcc 35420783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 33629383 - 33629518
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnn-tatgtatttttagttaagaaccat 309  Q
    ||||||||||||||||||  ||| ||||| | |||||||| |||||||| ||||||||||||||||||        ||| |||||||||||||||| |||    
T  33629383 atggttcttaactaaatt--cactatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaatatatatatttttagttaagaatcat 33629480  T
Q  310 atgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    | ||||| |||||||| |||||||||||||||||||||    
T  33629481 acgaaaaacatctaaggaattgtacctaaattttctcc 33629518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 343
Target Start/End: Complemental strand, 16473067 - 16472959
Alignment:
Q  234 catgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgta 333  Q
    |||||| |||||||||| |||||||| |||||||||||||||||        ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  16473067 catgatttcctcaaatccataattttctcaaagtttgttatatc-aaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgta 16472969  T
Q  334 cctaaatttt 343  Q
    ||||| ||||    
T  16472968 cctaagtttt 16472959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 20476564 - 20476431
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  || |||||| |||||||||| |||||||| ||||| |||||||||||        |||||||||||||||||||||||||    
T  20476564 atggttcttaactaaatt--catcatgatttcctcaaatccataattttctcaaaatttgttatatc-acaaaaatatgtatttttagttaagaaccata 20476468  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     ||||||||||||   |||||||||||| ||||||||    
T  20476467 cgaaaagcatctagagaattgtacctaagttttctcc 20476431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 4266115 - 4265982
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  |||| |||| || ||||||| |||||||| | ||||||||||| ||||       |||||||||||||||||||||||||    
T  4266115 atggttcttaactaaatt--caccgtgatttcttcaaatccataattttcttaaagtttgttacatccaaaaaa-tatgtatttttagttaagaaccata 4266019  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     ||||| || |||||||||||||||||| ||||||||    
T  4266018 cgaaaaacacctaagaaattgtacctaagttttctcc 4265982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 21259768 - 21259901
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||  ||||||  ||||||||| ||||||||   |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  21259768 atggttcttagttaaatt--caccatgatttcctcaaaatcataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 21259864  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||| | ||||| |||||||||||||||||||||    
T  21259865 agaaaagtacctaaggaattgtacctaaattttctcc 21259901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 1138692 - 1138559
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||  ||||| | |||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  1138692 atggttcttaactaaatt--cattatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 1138596  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||| | ||  |||||||||||| ||||||||    
T  1138595 cgaaaagcaccaaaagaattgtacctaagttttctcc 1138559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 350
Target Start/End: Original strand, 1164866 - 1164970
Alignment:
Q  246 aaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttct 345  Q
    ||||| |||||||||| ||||||| ||||||||       ||| |||||||| |||||||||||| |||||||| ||||| |||||||||||||||||||    
T  1164866 aaatccataattttttaaaagtttattatatccaaaaaaatatttatttttaattaagaaccatacgaaaagcagctaaggaattgtacctaaattttct 1164965  T
Q  346 ccatt 350  Q
    |||||    
T  1164966 ccatt 1164970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 350
Target Start/End: Original strand, 13754333 - 13754465
Alignment:
Q  215 ttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaa 314  Q
    ||||||||||||||  |||||| || |||||||||  |||||||| |||||||||| ||||||        ||||||||||||||||||||||||| |||    
T  13754333 ttcttaactaaatt--caccataatttcctcaaattcataattttctcaaagtttgctatatc-aaaaaaatatgtatttttagttaagaaccatacgaa 13754429  T
Q  315 aagcatctaagaaattgtacctaaattttctccatt 350  Q
    || || ||||| |||||||| |||||||||||||||    
T  13754430 aaacacctaagtaattgtacataaattttctccatt 13754465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 197 - 343
Target Start/End: Original strand, 8364654 - 8364797
Alignment:
Q  197 aaaacttaggtacaatggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtattttt 296  Q
    ||||||||||||||||||||||||||||||||  ||||||||| | || |||| ||||||| | |||||||||||||| ||        | | |||||||    
T  8364654 aaaacttaggtacaatggttcttaactaaatt--caccatgattttcttaaatttataattctctcaaagtttgttatgtctaaaaaaat-tatattttt 8364750  T
Q  297 agttaagaaccatatgaaaagcatctaagaaattgtacctaaatttt 343  Q
    ||||||||||||||  ||||||| ||||| |||||||||||| ||||    
T  8364751 agttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 8364797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 290 - 350
Target Start/End: Original strand, 16473069 - 16473129
Alignment:
Q  290 tatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccatt 350  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||    
T  16473069 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctccatt 16473129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 211 - 343
Target Start/End: Complemental strand, 35807068 - 35806939
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||||| | |||||||  ||||||||| | ||||||||| ||||||||| |||||||||||||| |        ||||||||||||||||||||||||    
T  35807068 atggttctaacctaaatt--caccatgattttctcaaatctttaatttttttaaagtttgttatattcaaaaaag-atgtatttttagttaagaaccata 35806972  T
Q  311 tgaaaagcatctaagaaattgtacctaaatttt 343  Q
    ||||||||| ||||  |||||||| ||||||||    
T  35806971 tgaaaagcacctaaagaattgtacttaaatttt 35806939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 211 - 319
Target Start/End: Complemental strand, 21262076 - 21261971
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  || |||||| |||||||||| | |||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  21262076 atggttcttaactaaatt--catcatgatttcctcaaatccacaattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccata 21261980  T
Q  311 tgaaaagca 319  Q
     ||||||||    
T  21261979 cgaaaagca 21261971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 333
Target Start/End: Complemental strand, 12808040 - 12807925
Alignment:
Q  215 ttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaa 314  Q
    ||||| ||||||||  ||||||||| |||| ||||| ||||||||||||||||||||||||| |       ||||||||||||||||| ||||||| |||    
T  12808040 ttcttgactaaatt--caccatgatttccttaaatccataattttttcaaagtttgttatat-ctaaaaaatatgtatttttagttaaaaaccatacgaa 12807944  T
Q  315 aagcatctaagaaattgta 333  Q
    || || |||||||||||||    
T  12807943 aaacacctaagaaattgta 12807925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 348
Target Start/End: Original strand, 15855957 - 15856015
Alignment:
Q  290 tatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  15855957 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcca 15856015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 35420669 - 35420612
Alignment:
Q  290 tatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||    
T  35420669 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctcc 35420612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 349
Target Start/End: Original strand, 2268723 - 2268778
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
    |||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||    
T  2268723 tttagttaagaaccatacaaaaagcatctaagaaattatacctaagttttctccat 2268778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 343
Target Start/End: Complemental strand, 18236562 - 18236470
Alignment:
Q  252 ataattttttcaaagtttgttatatccnnnnnnntat-gtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaatttt 343  Q
    |||||||||||||||||||||||||||        || |||||||||| |||||| |||| |||||||| |||||||||||||||||| ||||    
T  18236562 ataattttttcaaagtttgttatatccaaaaaaaaattgtatttttagctaagaatcataggaaaagcagctaagaaattgtacctaagtttt 18236470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 20476549 - 20476602
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  20476549 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 20476602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 316
Target Start/End: Complemental strand, 19976376 - 19976292
Alignment:
Q  232 accatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaa 316  Q
    |||||||| |||||||||| |||||||| ||||||||| | ||||||       || |||||||||||||||||||||| |||||    
T  19976376 accatgatttcctcaaatccataattttctcaaagtttatcatatccaaaaaaatacgtatttttagttaagaaccatacgaaaa 19976292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 319
Target Start/End: Original strand, 37655192 - 37655294
Alignment:
Q  213 ggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatg 312  Q
    ||||||||||||||||  ||||||||  |||||||||  |||||||| ||||||||||||||| |        |||||||||||||||||||||||||      
T  37655192 ggttcttaactaaatt--caccatgacttcctcaaattcataattttctcaaagtttgttataac--aaaaaatatgtatttttagttaagaaccataca 37655287  T
Q  313 aaaagca 319  Q
    |||||||    
T  37655288 aaaagca 37655294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 1138677 - 1138730
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||| | |||||||||||| ||||||||    
T  1138677 tttagttaagaaccatacgaaaagcagctatggaattgtacctaagttttctcc 1138730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 310
Target Start/End: Complemental strand, 12744941 - 12744863
Alignment:
Q  231 caccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||| |||||||||  |||||||| ||||||||||||||||||       ||||||||||||||||| |||||||    
T  12744941 caccatgatttcctcaaattcataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaaaaaccata 12744863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 43539225 - 43539278
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||| |||||| ||||| || ||||| |||||||||||||||||||||    
T  43539225 tttagttaaggaccatacgaaaaacacctaaggaattgtacctaaattttctcc 43539278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 343
Target Start/End: Original strand, 780915 - 780959
Alignment:
Q  299 ttaagaaccatatgaaaagcatctaagaaattgtacctaaatttt 343  Q
    |||||||||||| |||||||| |||||||||||||||||| ||||    
T  780915 ttaagaaccatacgaaaagcacctaagaaattgtacctaagtttt 780959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 12248495 - 12248539
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaa 338  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||    
T  12248495 tttatttaggaaccatatgaaaagcatctaagaaaatgtacctaa 12248539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 347
Target Start/End: Original strand, 17583367 - 17583410
Alignment:
Q  304 aaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||    
T  17583367 aaccatacgaaaagcacctaagaaattgtacctaagttttctcc 17583410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 37552348 - 37552408
Alignment:
Q  213 ggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttata 275  Q
    ||||||||||||||||  ||||||||  |||||||||  |||||||| |||||||||||||||    
T  37552348 ggttcttaactaaatt--caccatgacttcctcaaattcataattttctcaaagtttgttata 37552408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 32623268 - 32623214
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    ||||||||||||||||| ||||| || ||||| |||||||||||| |||| ||||    
T  32623268 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttttcca 32623214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 2255578 - 2255631
Alignment:
Q  292 tttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttct 345  Q
    ||||||||||||||||| | |||||||| ||||  |||||||||||| ||||||    
T  2255578 tttttagttaagaaccacacgaaaagcacctaaagaattgtacctaagttttct 2255631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 2529099 - 2529140
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacc 335  Q
    ||||||||||||||| | |||||||| |||||||||||||||    
T  2529099 tttagttaagaaccacacgaaaagcacctaagaaattgtacc 2529140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 4266100 - 4266153
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| ||||| || ||||| ||||||||| || ||||||||    
T  4266100 tttagttaagaaccatacgaaaaacacctaaggaattgtaccgaagttttctcc 4266153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 25751570 - 25751619
Alignment:
Q  295 ttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttc 344  Q
    |||||||||||||| | |||||||| |||| ||||||||||||| |||||    
T  25751570 ttagttaagaaccacacgaaaagcacctaaaaaattgtacctaagttttc 25751619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 33629398 - 33629345
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||||  |||||||  |||| |||||||||||| ||||||||    
T  33629398 tttagttaagaaccataccaaaagcacataaggaattgtacctaagttttctcc 33629345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 328
Target Start/End: Complemental strand, 10500132 - 10500096
Alignment:
Q  292 tttttagttaagaaccatatgaaaagcatctaagaaa 328  Q
    ||||||||||||||||||||||||| || ||||||||    
T  10500132 tttttagttaagaaccatatgaaaaacacctaagaaa 10500096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 12257582 - 12257614
Alignment:
Q  243 ctcaaatctataattttttcaaagtttgttata 275  Q
    |||||||| ||||||||||||||||||||||||    
T  12257582 ctcaaatccataattttttcaaagtttgttata 12257614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 5e-29; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 17426666 - 17426801
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatcc-nnnnnnntatgtatttttagttaagaaccat 309  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||||| ||||||||||||||||||        |||  |||||||||||||||||||    
T  17426666 atggttcttaactaaatt--caccatgatttcctcaaatctataattttctcaaagtttgttatatccaaaaaaaatatacatttttagttaagaaccat 17426763  T
Q  310 atgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    | |||||||| |||| ||||||||||||| ||||||||    
T  17426764 acgaaaagcacctaaaaaattgtacctaagttttctcc 17426801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 29780997 - 29781130
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    |||||| ||||||||||||||  ||| || |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  29780997 atggtttttaactaaatttac--cataatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 29781093  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||||||||||| ||||| |||||| ||||||||    
T  29781094 cgaaaagcatctaaggaattggacctaagttttctcc 29781130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 15882334 - 15882200
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| | |||||||| ||||| || |||||||| |||||||||       |||||||||||||||||||||||||    
T  15882334 atggttcttaactaaatt--caccatgattttctcaaatccataatattctcaaagttagttatatccaaaaaaatatgtatttttagttaagaaccata 15882237  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
      ||||||| ||||| |||||||||||| ||||||||    
T  15882236 caaaaagcacctaaggaattgtacctaagttttctcc 15882200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 38629607 - 38629474
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||  |||||||| ||||||||| ||||||||       |||||||||||||||||||||||||    
T  38629607 atggttcttaactaaatt--caccatgatttcctcaaattcataattttctcaaagtttattatatccaaaaaa-tatgtatttttagttaagaaccata 38629511  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     ||||||||| |||  |||||||| ||||||||||||    
T  38629510 cgaaaagcatttaaagaattgtacttaaattttctcc 38629474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 38520144 - 38520018
Alignment:
Q  218 ttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaag 317  Q
    |||||||||||  ||||||||| |||||||||  |||||||| ||||||||||||||||||       ||| ||||||||||||||||||||| ||||||    
T  38520144 ttaactaaatt--caccatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccatacgaaaag 38520048  T
Q  318 catctaagaaattgtacctaaattttctcc 347  Q
    || ||||| |||| ||||||||||||||||    
T  38520047 caactaaggaattatacctaaattttctcc 38520018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 211 - 346
Target Start/End: Complemental strand, 37114371 - 37114239
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| | || ||||| |||||||| ||||||||| ||||||||       |||||||||||| ||||||||||||    
T  37114371 atggttcttaactaaatt--caccatgattttcttaaatccataattttctcaaagtttattatatccaaaaaa-tatgtatttttaattaagaaccata 37114275  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctc 346  Q
     |||||||| ||||| |||||||||||| |||||||    
T  37114274 cgaaaagcacctaaggaattgtacctaagttttctc 37114239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 215 - 347
Target Start/End: Original strand, 23940846 - 23940976
Alignment:
Q  215 ttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaa 314  Q
    ||||||||||||||  ||||||||| ||||||||||  ||||||| ||||||||||||||||         ||||||||||||||||| ||||||| |||    
T  23940846 ttcttaactaaatt--caccatgatttcctcaaatccgtaattttctcaaagtttgttatatttaaaaaaatatgtatttttagttaaaaaccatacgaa 23940943  T
Q  315 aagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||| ||||| ||||||| |||| ||||||||    
T  23940944 aagcacctaaggaattgtaactaagttttctcc 23940976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 350
Target Start/End: Complemental strand, 33100703 - 33100642
Alignment:
Q  289 gtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccatt 350  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  33100703 gtatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctccatt 33100642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 211 - 316
Target Start/End: Complemental strand, 40891146 - 40891044
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||| ||    
T  40891146 atggttcttaactaaatt--caccatgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttagttaagaaccgta 40891050  T
Q  311 tgaaaa 316  Q
     |||||    
T  40891049 cgaaaa 40891044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 347
Target Start/End: Complemental strand, 8210435 - 8210323
Alignment:
Q  234 catgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgta 333  Q
    |||||| |||||||||| |||||||| ||||||||||||||||||       ||| ||| |||||||||||| |||| |||||||| ||||| |||||||    
T  8210435 catgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatatatatttagttaagaatcatacgaaaagcacctaaggaattgta 8210337  T
Q  334 cctaaattttctcc 347  Q
    ||||| ||||||||    
T  8210336 cctaagttttctcc 8210323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 346
Target Start/End: Original strand, 33100711 - 33100815
Alignment:
Q  241 tcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaat 340  Q
    |||||||||| |||||||| |||||||||||||||||        ||||| |||||||||||||||| || ||||||||  ||||||||||||||||| |    
T  33100711 tcctcaaatccataattttctcaaagtttgttatatc-aaaaaaatatgtttttttagttaagaaccgtacgaaaagcacataagaaattgtacctaagt 33100809  T
Q  341 tttctc 346  Q
    ||||||    
T  33100810 tttctc 33100815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 11828634 - 11828774
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnn------tatgtatttttagttaaga 304  Q
    ||||||||||||||||||  |||||| || |||||||||| || ||||| |||||||||||||||||              |||||||||||||||||||    
T  11828634 atggttcttaactaaatt--caccataatttcctcaaatccattattttctcaaagtttgttatatctaacaaaaaaaaaatatgtatttttagttaaga 11828731  T
Q  305 accatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    || ||||||||||||  |||| |||||||||||| ||||||||    
T  11828732 acgatatgaaaagcaagtaaggaattgtacctaagttttctcc 11828774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 12234585 - 12234638
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  12234585 tttagttaataaccatacgaaaagcatctaagaaattgtacctaagttttctcc 12234638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 12234600 - 12234466
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagttt-gttatatccnnnnnnntatgtatttttagttaagaaccat 309  Q
    |||||| |||||||||||  ||| ||||| |||||||||  |||||||| ||||||||| |||||||||       ||||||||||||||||||||||||    
T  12234600 atggttattaactaaatt--cacgatgatttcctcaaattcataattttctcaaagttttgttatatccaaaaaa-tatgtatttttagttaagaaccat 12234504  T
Q  310 atgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    | |||||||| | ||  |||| ||||||| ||||||||    
T  12234503 acgaaaagcacccaaagaattatacctaagttttctcc 12234466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 24211388 - 24211450
Alignment:
Q  286 tatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcca 348  Q
    ||||||||| || |||||||||||| |||||||| ||||| |||||||||||| |||||||||    
T  24211388 tatgtatttctatttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcca 24211450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 15882319 - 15882372
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||    
T  15882319 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctcc 15882372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 311
Target Start/End: Original strand, 4262014 - 4262111
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||| ||||| ||||||| || |||||||| |||||||||||||||| |       |||||||||||| ||||||||||||    
T  4262014 atggttcttaactaaatt--cactatgatttcctcaagtccataattttctcaaagtttgttatattc-aaaaaatatgtatttttaattaagaaccata 4262110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 349
Target Start/End: Complemental strand, 29781012 - 29780957
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
    ||||||||| ||||||| |||||||| ||||| ||||||||||||||||| |||||    
T  29781012 tttagttaaaaaccatacgaaaagcacctaaggaattgtacctaaattttatccat 29780957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 40891131 - 40891182
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttct 345  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| ||||||    
T  40891131 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 40891182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 349
Target Start/End: Original strand, 24741861 - 24741996
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||| || ||||| ||| ||||| |||||| |         |||||||||||||||||||||||    
T  24741861 atggttcttaactaaatt--caccatgatttcctcaaatccatgattttctcagagtttattatatgcaacatag-gtgtatttttagttaagaaccata 24741957  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
     ||||| || || |  ||||||||| ||||||| |||||    
T  24741958 cgaaaatcacctcaagaattgtacccaaattttgtccat 24741996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 17426681 - 17426628
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||  |||||||||||| ||||||||    
T  17426681 tttagttaagaaccatacgaaaagcacctaatgaattgtacctaagttttctcc 17426628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 24741876 - 24741827
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaatttt 343  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| ||||    
T  24741876 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 24741827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 349
Target Start/End: Original strand, 38515616 - 38515677
Alignment:
Q  288 tgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccat 349  Q
    |||||||||| |||| ||||| | |||| ||||||||| |||||||||||| ||||||||||    
T  38515616 tgtatttttaattaaaaaccacacgaaatgcatctaaggaattgtacctaagttttctccat 38515677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 38629592 - 38629645
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| ||||| || ||||| |||||||||||| ||||||||    
T  38629592 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctcc 38629645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 37114356 - 37114407
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttct 345  Q
    |||||||||||||||||  |||| |||||||  |||||||||||||||||||    
T  37114356 tttagttaagaaccatacaaaaaacatctaaagaattgtacctaaattttct 37114407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 4035798 - 4035741
Alignment:
Q  290 tatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||| |||||| |||||||| || || || ||||||||| ||||||||    
T  4035798 tatttttagttaagtaccatacgaaaagcacctgaggaactgtacctaagttttctcc 4035741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 5356234 - 5356303
Alignment:
Q  286 tatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccattctttt 355  Q
    |||||||||||| ||||||| |||| ||||| || ||| ||||||||| |||| ||||||| ||| ||||    
T  5356234 tatgtatttttaattaagaatcatacgaaaaacacctacgaaattgtatctaagttttctctattttttt 5356303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 23940857 - 23940804
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||| |||| ||||||||  |||||||||||||| || ||||||||    
T  23940857 tttagttaagaatcatacgaaaagcacttaagaaattgtaccgaagttttctcc 23940804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 24211331 - 24211278
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||| |||||||||||| |||||||| ||||  |||||||||||| ||||||||    
T  24211331 tttaattaagaaccatacgaaaagcacctaaagaattgtacctaagttttctcc 24211278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 35467231 - 35467175
Alignment:
Q  287 atgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaatttt 343  Q
    |||||||||||||||||||||| |  ||||| ||||||  |||||||||||| ||||    
T  35467231 atgtatttttagttaagaaccacacaaaaagtatctaaagaattgtacctaagtttt 35467175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 1977 - 2111
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| |||||||||| ||||||||  ||||||||||||||||        || ||||||||||||||||||||||    
T  1977 atggttcttaactaaatt--caccatgatttcctcaaatccataattttcacaaagtttgttatatctaaaaaaatacgtatttttagttaagaaccata 2074  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    | ||||||| ||||| |||||||||||| ||||||||    
T  2075 taaaaagcacctaaggaattgtacctaagttttctcc 2111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 1992 - 1939
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||||  ||||||| ||||  |||| ||||||||||||||||    
T  1992 tttagttaagaaccatacaaaaagcacctaaacaattatacctaaattttctcc 1939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 45967 - 45834
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||||||||| | |||||||| |||||||| ||||||||||||||||||       |||||||||||||||||||||||||    
T  45967 atggttcttaactaaatt--caccatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa-tatgtatttttagttaagaaccata 45871  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
      ||||||| ||||| |||||||||||| ||||||||    
T  45870 caaaaagcacctaaggaattgtacctaagttttctcc 45834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 350
Target Start/End: Original strand, 45952 - 46008
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctccatt 350  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| |||||||||||    
T  45952 tttagttaagaaccataagaaaagcacctaaggaattgtacctaagttttctccatt 46008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 3431 - 3564
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||| ||||||  ||||||||| ||||||||| ||||||||| ||||||||||||||||||       |||||||||||| ||||||||||||    
T  3431 atggttcttaattaaatt--caccatgatttcctcaaatttataattttatcaaagtttgttatatcc-aaaaaatatgtatttttatttaagaaccata 3527  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||| | ||||  |||||||||||||||||||||    
T  3528 cgaaaagtacctaaagaattgtacctaaattttctcc 3564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 7219 - 7086
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  || |||||| |||||||||| |||||||| ||||||||||||||||||       ||| |||||||||||||||| ||||    
T  7219 atggttcttaactaaatt--catcatgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaatatatatatttttagttaagaatcata 7123  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     ||||| || ||||| |||||||||||||||||||||    
T  7122 cgaaaaacacctaaggaattgtacctaaattttctcc 7086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 7204 - 7257
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| ||||| ||| |||||||||||||||||    
T  7204 tttagttaagaaccatacgaaaagcacctaaggaatcgtacctaaattttctcc 7257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 347
Target Start/End: Complemental strand, 51196 - 51063
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccata 310  Q
    ||||||||||||||||||  ||| ||||| |||| ||||  |||||||| ||||||||||||||||||       ||| |||||||||||||||||||||    
T  51196 atggttcttaactaaatt--cactatgatttccttaaattcataattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccata 51100  T
Q  311 tgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
     |||||| | ||||| |||||||||||| ||||||||    
T  51099 cgaaaaggacctaaggaattgtacctaagttttctcc 51063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 51181 - 51234
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||||||||||||||||||||||| | ||||| |||||||||||| ||||||||    
T  51181 tttagttaagaaccatatgaaaagtacctaaggaattgtacctaagttttctcc 51234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 347
Target Start/End: Complemental strand, 14572 - 14442
Alignment:
Q  214 gttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatga 313  Q
    |||||||||||||||  |||||| |  || ||| ||| |||||||| ||||||| ||||||||||       |||||||||||||||||| |||||| ||    
T  14572 gttcttaactaaatt--caccattacttcgtcatatccataattttctcaaagtctgttatatccaaataa-tatgtatttttagttaagtaccatagga 14476  T
Q  314 aaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||| || |||||||||||||||||| ||||||||    
T  14475 aaaacacctaagaaattgtacctaagttttctcc 14442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 14560 - 14612
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    ||||||||||||| ||| |||||||| | ||| |||||||||||| |||||||    
T  14560 tttagttaagaacgatacgaaaagcacccaaggaattgtacctaagttttctc 14612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 343
Target Start/End: Complemental strand, 48256 - 48130
Alignment:
Q  214 gttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatga 313  Q
    |||||||||||||||  ||||||||| | |||||||| |||||||| ||||||||||||||||||       |||||||||||| |||| ||||||| ||    
T  48256 gttcttaactaaatt--caccatgattttctcaaatccataattttctcaaagtttgttatatcc-aaaaaatatgtatttttaattaaaaaccatacga 48160  T
Q  314 aaagcatctaagaaattgtacctaaatttt 343  Q
    |||||| |||| ||||| ||| ||| ||||    
T  48159 aaagcacctaaaaaattatacgtaagtttt 48130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 48244 - 48296
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctc 346  Q
    ||||||||||||| ||| |||||||||||||| ||||||| |||| |||||||    
T  48244 tttagttaagaactatacgaaaagcatctaaggaattgtatctaagttttctc 48296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 347
Target Start/End: Complemental strand, 26464 - 26405
Alignment:
Q  288 tgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||| ||||||| |||||||| ||||| |||||||||||| ||||||||    
T  26464 tgtatttttagttaataaccatacgaaaagcacctaaggaattgtacctaagttttctcc 26405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 5762 - 5701
Alignment:
Q  286 tatgtatttttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    ||||||||||||||||||||||||| |||||||| ||||  |||||||||| | ||||||||    
T  5762 tatgtatttttagttaagaaccatacgaaaagcacctaaagaattgtaccttagttttctcc 5701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 5823 - 5878
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaag--aaattgtacctaaattttctcc 347  Q
    ||||||||||||||||| |||||||| |||||  ||||||||||||| ||||||||    
T  5823 tttagttaagaaccatacgaaaagcacctaaggaaaattgtacctaagttttctcc 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 345
Target Start/End: Complemental strand, 10244 - 10118
Alignment:
Q  215 ttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatccnnnnnnntatgtatttttagttaagaaccatatgaa 314  Q
    ||||||| ||||||  ||||||||| | |||| ||| |||||||| ||||||||||||||||||       ||| ||||||||||||||||||||| | |    
T  10244 ttcttaagtaaatt--caccatgattttctcacatccataattttctcaaagtttgttatatcc--aaaaatatatatttttagttaagaaccatacgca 10149  T
Q  315 aagcatctaagaaattgtacctaaattttct 345  Q
    || || ||||| |||| ||||||| ||||||    
T  10148 aaacacctaaggaattatacctaagttttct 10118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 10233 - 10286
Alignment:
Q  294 tttagttaagaaccatatgaaaagcatctaagaaattgtacctaaattttctcc 347  Q
    |||| |||||||  ||| ||||||||  ||||||||||||||||||||||||||    
T  10233 tttacttaagaattatacgaaaagcacataagaaattgtacctaaattttctcc 10286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 278
Target Start/End: Complemental strand, 94305 - 94240
Alignment:
Q  211 atggttcttaactaaatttacaccatgatctcctcaaatctataattttttcaaagtttgttatatcc 278  Q
    ||||||||||||||||||  ||||||||| |  ||||||| | |||||| ||| ||||||||||||||    
T  94305 atggttcttaactaaatt--caccatgattttatcaaatccaaaattttctcatagtttgttatatcc 94240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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