View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9628_low_18 (Length: 347)

Name: NF9628_low_18
Description: NF9628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9628_low_18
NF9628_low_18
[»] chr2 (60 HSPs)
chr2 (1-56)||(33585595-33585650)
chr2 (1-56)||(35220513-35220568)
chr2 (1-56)||(280983-281038)
chr2 (1-56)||(5427729-5427784)
chr2 (1-56)||(17249007-17249062)
chr2 (1-56)||(19062207-19062262)
chr2 (1-55)||(8971468-8971522)
chr2 (1-54)||(25508930-25508983)
chr2 (4-56)||(17994586-17994638)
chr2 (1-56)||(84020-84075)
chr2 (1-56)||(7646663-7646718)
chr2 (1-56)||(9986181-9986236)
chr2 (1-56)||(10237076-10237131)
chr2 (1-56)||(12554041-12554096)
chr2 (1-56)||(18763653-18763708)
chr2 (1-56)||(25087223-25087278)
chr2 (1-56)||(27248990-27249045)
chr2 (1-56)||(31580494-31580549)
chr2 (1-56)||(31788641-31788696)
chr2 (1-56)||(40659771-40659826)
chr2 (1-55)||(4228310-4228364)
chr2 (2-56)||(29173577-29173631)
chr2 (1-55)||(30420856-30420910)
chr2 (1-47)||(33923890-33923936)
chr2 (6-56)||(37994474-37994524)
chr2 (1-54)||(21570249-21570302)
chr2 (3-56)||(38445353-38445406)
chr2 (1-53)||(5754621-5754673)
chr2 (1-53)||(25622782-25622834)
chr2 (1-56)||(1421861-1421915)
chr2 (1-56)||(3309130-3309185)
chr2 (1-56)||(4778938-4778993)
chr2 (1-56)||(4904005-4904060)
chr2 (1-56)||(8806053-8806108)
chr2 (1-56)||(8809464-8809519)
chr2 (3-54)||(14955716-14955767)
chr2 (1-56)||(24461628-24461683)
chr2 (1-56)||(27097267-27097322)
chr2 (1-56)||(27949613-27949668)
chr2 (12-55)||(30399890-30399933)
chr2 (1-56)||(32913427-32913482)
chr2 (1-56)||(34600401-34600456)
chr2 (1-56)||(39641145-39641200)
chr2 (2-56)||(4041454-4041508)
chr2 (2-56)||(17151610-17151664)
chr2 (6-56)||(36234190-36234240)
chr2 (5-47)||(37876475-37876517)
chr2 (8-53)||(11561417-11561462)
chr2 (2-47)||(16376125-16376170)
chr2 (1-54)||(38575326-38575379)
chr2 (3-44)||(41327926-41327967)
chr2 (7-47)||(1415748-1415788)
chr2 (1-53)||(5071108-5071160)
chr2 (11-55)||(6174013-6174057)
chr2 (1-37)||(7677752-7677788)
chr2 (2-54)||(10929851-10929903)
chr2 (1-45)||(19598024-19598068)
chr2 (1-41)||(28533829-28533869)
chr2 (1-53)||(34480289-34480341)
chr2 (1-53)||(41797934-41797986)
[»] chr1 (56 HSPs)
chr1 (1-55)||(24583324-24583378)
chr1 (1-54)||(5984014-5984067)
chr1 (1-56)||(44915817-44915872)
chr1 (1-56)||(9687044-9687099)
chr1 (1-56)||(24583128-24583183)
chr1 (1-56)||(27456662-27456717)
chr1 (1-56)||(44543450-44543505)
chr1 (1-56)||(48750363-48750418)
chr1 (1-56)||(49504454-49504509)
chr1 (1-56)||(49627091-49627146)
chr1 (1-55)||(14872817-14872871)
chr1 (1-54)||(7836657-7836710)
chr1 (8-56)||(9172684-9172732)
chr1 (8-56)||(9180666-9180714)
chr1 (1-56)||(5701446-5701501)
chr1 (1-56)||(15431525-15431580)
chr1 (1-56)||(29738523-29738578)
chr1 (1-56)||(31317914-31317969)
chr1 (1-56)||(31919167-31919222)
chr1 (1-56)||(51872050-51872105)
chr1 (6-56)||(7342914-7342964)
chr1 (6-56)||(11454129-11454179)
chr1 (2-56)||(34529253-34529307)
chr1 (1-55)||(35484251-35484305)
chr1 (1-54)||(19061087-19061140)
chr1 (11-56)||(45805668-45805713)
chr1 (6-55)||(48217629-48217678)
chr1 (6-54)||(27579989-27580037)
chr1 (4-40)||(32395179-32395215)
chr1 (1-56)||(7997976-7998031)
chr1 (1-56)||(11462341-11462396)
chr1 (1-56)||(25406123-25406178)
chr1 (1-56)||(31984339-31984394)
chr1 (1-56)||(36775569-36775624)
chr1 (1-56)||(38520374-38520429)
chr1 (1-56)||(45415736-45415791)
chr1 (1-56)||(47133081-47133136)
chr1 (3-54)||(49648736-49648787)
chr1 (1-56)||(50165938-50165993)
chr1 (1-56)||(51868484-51868539)
chr1 (1-55)||(9919575-9919629)
chr1 (2-56)||(10776320-10776374)
chr1 (6-56)||(19715734-19715784)
chr1 (1-55)||(21947478-21947532)
chr1 (1-55)||(31130433-31130487)
chr1 (2-56)||(34412951-34413005)
chr1 (6-55)||(13144672-13144721)
chr1 (7-56)||(16162012-16162061)
chr1 (11-56)||(32676974-32677019)
chr1 (2-54)||(7337524-7337576)
chr1 (1-53)||(28677869-28677921)
chr1 (1-53)||(32879032-32879084)
chr1 (6-54)||(33817009-33817057)
chr1 (6-54)||(33876479-33876527)
chr1 (8-56)||(34519322-34519370)
chr1 (12-56)||(35584461-35584505)
[»] chr8 (47 HSPs)
chr8 (1-56)||(1236554-1236609)
chr8 (1-56)||(15344485-15344540)
chr8 (1-56)||(15433550-15433605)
chr8 (1-56)||(15524854-15524909)
chr8 (1-49)||(27110329-27110377)
chr8 (1-56)||(31013465-31013520)
chr8 (1-55)||(37971460-37971514)
chr8 (2-56)||(41060120-41060174)
chr8 (3-56)||(16928614-16928667)
chr8 (1-56)||(7883098-7883153)
chr8 (1-56)||(9619196-9619251)
chr8 (1-56)||(11464361-11464416)
chr8 (1-56)||(11725870-11725925)
chr8 (1-56)||(14585854-14585909)
chr8 (1-56)||(29777409-29777464)
chr8 (1-56)||(30568178-30568233)
chr8 (1-56)||(41896694-41896749)
chr8 (1-47)||(18890565-18890611)
chr8 (1-47)||(23230820-23230866)
chr8 (6-56)||(37565718-37565768)
chr8 (1-53)||(44578220-44578272)
chr8 (1-56)||(3240557-3240612)
chr8 (1-56)||(4809154-4809209)
chr8 (1-56)||(7198052-7198107)
chr8 (1-56)||(11267198-11267253)
chr8 (1-56)||(15047082-15047137)
chr8 (1-56)||(40211159-40211214)
chr8 (5-56)||(42046402-42046453)
chr8 (1-56)||(42447866-42447921)
chr8 (1-56)||(44099775-44099830)
chr8 (6-56)||(2656065-2656115)
chr8 (1-39)||(5046930-5046968)
chr8 (6-56)||(9498438-9498488)
chr8 (1-47)||(10377866-10377912)
chr8 (6-56)||(14906762-14906812)
chr8 (1-55)||(16794481-16794535)
chr8 (6-56)||(24099113-24099163)
chr8 (6-56)||(25190922-25190972)
chr8 (6-56)||(34611999-34612049)
chr8 (1-47)||(43833862-43833908)
chr8 (6-56)||(45445668-45445718)
chr8 (1-54)||(8412381-8412434)
chr8 (6-55)||(33896281-33896330)
chr8 (1-54)||(43192188-43192241)
chr8 (1-53)||(10338569-10338621)
chr8 (1-53)||(11162225-11162277)
chr8 (1-56)||(16247082-16247135)
[»] chr3 (63 HSPs)
chr3 (1-56)||(53807717-53807772)
chr3 (1-56)||(628782-628837)
chr3 (1-56)||(36906302-36906357)
chr3 (1-56)||(45568304-45568359)
chr3 (1-56)||(49552063-49552118)
chr3 (1-56)||(51923901-51923956)
chr3 (1-55)||(48650594-48650648)
chr3 (1-54)||(4711656-4711709)
chr3 (6-54)||(4821985-4822033)
chr3 (1-56)||(6954555-6954610)
chr3 (1-56)||(9797393-9797448)
chr3 (1-56)||(9998641-9998696)
chr3 (1-56)||(10108410-10108465)
chr3 (1-56)||(10229650-10229705)
chr3 (1-56)||(21289673-21289728)
chr3 (4-55)||(21916656-21916707)
chr3 (1-56)||(27856339-27856394)
chr3 (1-56)||(38854875-38854930)
chr3 (1-48)||(38859979-38860026)
chr3 (1-56)||(43017062-43017117)
chr3 (1-56)||(43488449-43488504)
chr3 (1-56)||(46304379-46304434)
chr3 (1-56)||(50194194-50194249)
chr3 (1-56)||(52922976-52923031)
chr3 (6-56)||(3848758-3848808)
chr3 (1-47)||(8914886-8914932)
chr3 (1-55)||(21313210-21313264)
chr3 (1-55)||(25631366-25631420)
chr3 (1-47)||(51303511-51303557)
chr3 (1-54)||(10233244-10233297)
chr3 (1-54)||(30648560-30648613)
chr3 (3-56)||(35175580-35175633)
chr3 (2-55)||(42460924-42460977)
chr3 (1-53)||(1074632-1074684)
chr3 (4-56)||(7448773-7448825)
chr3 (4-56)||(7456915-7456967)
chr3 (1-53)||(11819421-11819473)
chr3 (1-41)||(21533683-21533723)
chr3 (1-49)||(25849989-25850037)
chr3 (1-52)||(7546789-7546840)
chr3 (1-56)||(17237985-17238040)
chr3 (2-49)||(20987621-20987668)
chr3 (1-56)||(25162616-25162671)
chr3 (1-56)||(33580054-33580109)
chr3 (1-56)||(35499039-35499094)
chr3 (1-56)||(44907238-44907293)
chr3 (1-56)||(46934819-46934874)
chr3 (1-56)||(54149165-54149220)
chr3 (1-55)||(29503641-29503695)
chr3 (6-56)||(32607654-32607704)
chr3 (6-56)||(38440430-38440480)
chr3 (6-56)||(50611257-50611307)
chr3 (11-56)||(2342638-2342683)
chr3 (1-38)||(27706103-27706140)
chr3 (1-54)||(40556876-40556929)
chr3 (1-53)||(105785-105837)
chr3 (1-53)||(913054-913106)
chr3 (1-53)||(1165134-1165186)
chr3 (1-41)||(16235600-16235640)
chr3 (3-55)||(36461297-36461349)
chr3 (6-50)||(40702764-40702808)
chr3 (1-53)||(42106462-42106514)
chr3 (1-41)||(46178748-46178788)
[»] chr6 (43 HSPs)
chr6 (1-54)||(7976048-7976101)
chr6 (1-56)||(67860-67915)
chr6 (1-56)||(546207-546262)
chr6 (1-56)||(9341510-9341565)
chr6 (1-56)||(21426545-21426600)
chr6 (5-56)||(32327079-32327130)
chr6 (1-56)||(33053027-33053082)
chr6 (6-56)||(4984406-4984456)
chr6 (3-56)||(606382-606435)
chr6 (2-55)||(12170645-12170698)
chr6 (1-56)||(8497151-8497206)
chr6 (1-56)||(10228862-10228917)
chr6 (1-56)||(12059612-12059667)
chr6 (1-56)||(25064419-25064474)
chr6 (1-56)||(33740417-33740472)
chr6 (6-56)||(8027957-8028007)
chr6 (1-55)||(23128794-23128848)
chr6 (2-56)||(28981354-28981408)
chr6 (3-56)||(3913433-3913486)
chr6 (1-54)||(20226027-20226080)
chr6 (1-54)||(22120011-22120064)
chr6 (7-56)||(30776845-30776894)
chr6 (1-53)||(21507584-21507636)
chr6 (1-56)||(679284-679339)
chr6 (1-56)||(4088643-4088698)
chr6 (1-56)||(12653127-12653182)
chr6 (1-56)||(17237125-17237180)
chr6 (1-56)||(17334936-17334991)
chr6 (1-56)||(23947156-23947211)
chr6 (1-56)||(30493708-30493763)
chr6 (1-56)||(30608374-30608429)
chr6 (1-56)||(31296996-31297051)
chr6 (1-56)||(32802722-32802777)
chr6 (1-56)||(33110794-33110849)
chr6 (1-56)||(35001773-35001828)
chr6 (1-55)||(8196247-8196301)
chr6 (1-47)||(14802003-14802049)
chr6 (2-56)||(29255305-29255359)
chr6 (1-53)||(2488461-2488513)
chr6 (4-56)||(7515061-7515113)
chr6 (1-49)||(12654052-12654100)
chr6 (1-53)||(23654589-23654641)
chr6 (1-53)||(30813396-30813448)
[»] chr7 (40 HSPs)
chr7 (1-56)||(8001405-8001460)
chr7 (1-56)||(35133124-35133179)
chr7 (1-56)||(37837317-37837372)
chr7 (1-54)||(48316673-48316726)
chr7 (1-56)||(32684851-32684906)
chr7 (1-56)||(34899466-34899521)
chr7 (1-56)||(40993334-40993389)
chr7 (1-56)||(42978787-42978842)
chr7 (1-56)||(46822198-46822253)
chr7 (1-56)||(48061599-48061654)
chr7 (6-56)||(433530-433580)
chr7 (1-54)||(9449998-9450051)
chr7 (1-54)||(35261480-35261533)
chr7 (1-56)||(12141166-12141222)
chr7 (1-41)||(31481973-31482013)
chr7 (3-47)||(46822611-46822655)
chr7 (1-56)||(7640614-7640669)
chr7 (6-53)||(9137735-9137782)
chr7 (1-56)||(35496014-35496069)
chr7 (1-56)||(39171449-39171504)
chr7 (1-56)||(45349658-45349713)
chr7 (1-56)||(46339237-46339292)
chr7 (1-56)||(48930884-48930939)
chr7 (6-56)||(1485095-1485145)
chr7 (1-55)||(13592349-13592403)
chr7 (9-55)||(19404617-19404663)
chr7 (1-55)||(22927710-22927764)
chr7 (6-56)||(42408525-42408575)
chr7 (1-54)||(17222841-17222894)
chr7 (1-54)||(28407779-28407832)
chr7 (8-53)||(38649096-38649141)
chr7 (1-41)||(5348466-5348506)
chr7 (303-331)||(5793068-5793096)
chr7 (1-41)||(13796803-13796843)
chr7 (12-56)||(14627736-14627780)
chr7 (6-54)||(19297052-19297100)
chr7 (1-53)||(21991001-21991053)
chr7 (1-53)||(36579071-36579123)
chr7 (1-53)||(41288295-41288347)
chr7 (1-56)||(42311463-42311516)
[»] chr5 (48 HSPs)
chr5 (1-56)||(6011997-6012052)
chr5 (1-56)||(13422107-13422162)
chr5 (1-56)||(34945567-34945622)
chr5 (1-56)||(38597971-38598026)
chr5 (6-56)||(10332406-10332456)
chr5 (1-56)||(7241969-7242024)
chr5 (1-56)||(7247144-7247199)
chr5 (1-56)||(9113584-9113639)
chr5 (1-56)||(13007403-13007458)
chr5 (1-56)||(24229643-24229698)
chr5 (1-56)||(24874703-24874758)
chr5 (1-56)||(25980331-25980386)
chr5 (1-56)||(26825604-26825659)
chr5 (1-56)||(28540765-28540820)
chr5 (1-56)||(41184279-41184334)
chr5 (2-56)||(14211402-14211456)
chr5 (1-55)||(43148912-43148966)
chr5 (6-55)||(8096358-8096407)
chr5 (3-55)||(8088072-8088124)
chr5 (2-54)||(31391614-31391666)
chr5 (1-56)||(3271241-3271296)
chr5 (6-53)||(9425327-9425374)
chr5 (1-56)||(11768184-11768239)
chr5 (6-53)||(15710873-15710920)
chr5 (1-56)||(16981477-16981532)
chr5 (1-56)||(19103326-19103381)
chr5 (1-56)||(26877968-26878022)
chr5 (1-56)||(35475177-35475232)
chr5 (1-56)||(37985972-37986027)
chr5 (1-47)||(2979174-2979220)
chr5 (1-55)||(4954177-4954231)
chr5 (1-55)||(11976795-11976849)
chr5 (2-56)||(15571662-15571716)
chr5 (6-56)||(27266698-27266748)
chr5 (6-56)||(38007536-38007586)
chr5 (1-54)||(14082257-14082310)
chr5 (1-50)||(15571092-15571141)
chr5 (3-56)||(19121088-19121141)
chr5 (6-55)||(28235777-28235826)
chr5 (1-54)||(34881902-34881955)
chr5 (3-47)||(6217075-6217119)
chr5 (1-53)||(6681607-6681659)
chr5 (1-53)||(11734575-11734627)
chr5 (1-53)||(17095971-17096023)
chr5 (1-53)||(23428582-23428634)
chr5 (1-53)||(27241394-27241446)
chr5 (1-49)||(29154544-29154592)
chr5 (1-53)||(39531142-39531194)
[»] chr4 (54 HSPs)
chr4 (1-56)||(2520974-2521029)
chr4 (1-56)||(19853371-19853426)
chr4 (1-56)||(47320271-47320326)
chr4 (1-56)||(53616489-53616544)
chr4 (2-56)||(29966522-29966576)
chr4 (4-56)||(21686101-21686153)
chr4 (1-56)||(9645363-9645418)
chr4 (1-56)||(11299869-11299924)
chr4 (1-56)||(27652138-27652193)
chr4 (1-56)||(31891146-31891201)
chr4 (1-56)||(38706549-38706604)
chr4 (1-56)||(51318180-51318235)
chr4 (6-56)||(20569457-20569507)
chr4 (6-56)||(22301050-22301100)
chr4 (6-56)||(34024277-34024327)
chr4 (2-56)||(43095824-43095878)
chr4 (5-54)||(10496534-10496583)
chr4 (1-46)||(44596855-44596900)
chr4 (7-56)||(56199297-56199346)
chr4 (1-49)||(10359394-10359442)
chr4 (6-54)||(12493493-12493541)
chr4 (3-55)||(17949184-17949236)
chr4 (3-55)||(17953036-17953088)
chr4 (1-53)||(32766709-32766761)
chr4 (2-46)||(33921250-33921294)
chr4 (1-56)||(4644053-4644108)
chr4 (1-56)||(9528716-9528771)
chr4 (1-56)||(13634310-13634365)
chr4 (1-56)||(19896482-19896537)
chr4 (1-56)||(22611378-22611433)
chr4 (1-56)||(43510391-43510446)
chr4 (1-56)||(44947607-44947662)
chr4 (1-56)||(48257491-48257546)
chr4 (1-56)||(49410418-49410473)
chr4 (1-56)||(53811223-53811277)
chr4 (1-56)||(56040505-56040560)
chr4 (6-56)||(25274083-25274133)
chr4 (6-56)||(28857601-28857651)
chr4 (1-47)||(29960817-29960863)
chr4 (6-56)||(35261392-35261442)
chr4 (6-56)||(35348507-35348557)
chr4 (1-47)||(36194903-36194949)
chr4 (1-54)||(1532103-1532156)
chr4 (1-54)||(2115429-2115482)
chr4 (1-54)||(9178548-9178601)
chr4 (1-49)||(4622445-4622493)
chr4 (1-53)||(7084279-7084331)
chr4 (1-53)||(8712846-8712898)
chr4 (1-53)||(9662177-9662229)
chr4 (1-53)||(27091047-27091099)
chr4 (1-53)||(30416366-30416418)
chr4 (1-37)||(37465677-37465713)
chr4 (1-37)||(47158420-47158456)
chr4 (7-55)||(51888071-51888119)
[»] scaffold0219 (1 HSPs)
scaffold0219 (6-54)||(14732-14780)
[»] scaffold0088 (1 HSPs)
scaffold0088 (3-55)||(50953-51005)
[»] scaffold0495 (1 HSPs)
scaffold0495 (1-56)||(5581-5636)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-56)||(71729-71784)
[»] scaffold0049 (1 HSPs)
scaffold0049 (2-56)||(71159-71213)
[»] scaffold0603 (1 HSPs)
scaffold0603 (3-52)||(7892-7941)
[»] scaffold0157 (1 HSPs)
scaffold0157 (6-54)||(26936-26984)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-56)||(16159-16214)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-56)||(9901-9956)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-56)||(83275-83330)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-56)||(57947-58002)
[»] scaffold0884 (1 HSPs)
scaffold0884 (2-56)||(1832-1886)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-47)||(15667-15713)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-55)||(65902-65956)


Alignment Details
Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33585650 - 33585595
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  33585650 cgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcatcctttacg 33585595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35220513 - 35220568
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  35220513 cgttgtatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacg 35220568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 280983 - 281038
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  280983 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacg 281038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5427784 - 5427729
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  5427784 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacg 5427729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17249062 - 17249007
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||    
T  17249062 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcatttacg 17249007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19062262 - 19062207
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||||| ||||||||    
T  19062262 cgttgtatgctattaacttgggtgatgtgagtttgctcgcagattcaccctttacg 19062207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8971522 - 8971468
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||| |||||||||||||||| || ||| ||||||||||||||||||||||||||    
T  8971522 cgttatatgctattaacttggatgctgtgagtttgttcgcatattcatcctttac 8971468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25508983 - 25508930
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    ||||||||| |||||||||||||||||| |||||||||||| ||||||| ||||    
T  25508983 cgttgtatgttattaacttgggtgatgtgagtttgttcgcagattcatcgttta 25508930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 17994638 - 17994586
Alignment:
Q  4 tgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||| || ||| ||||||||||||||||||||| |||||    
T  17994638 tgtatgctattaacttggatgttgtgagtttgttcgcatattcatccgttacg 17994586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 84075 - 84020
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  84075 cgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 84020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7646663 - 7646718
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| | ||||||    
T  7646663 cgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccttttacg 7646718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9986236 - 9986181
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  9986236 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 9986181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10237131 - 10237076
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  10237131 cgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacg 10237076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12554096 - 12554041
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||| |||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  12554096 cgttgtatgatattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 12554041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 18763653 - 18763708
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| ||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  18763653 cgttttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 18763708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25087223 - 25087278
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| |||||| ||||||||| || ||||||||||||||    
T  25087223 cgttatatgctattaacttggatgatgtgagtttgttcccagattcatcctttacg 25087278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27249045 - 27248990
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  27249045 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 27248990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31580549 - 31580494
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| |||||| |||||||||||| ||||||| ||||||    
T  31580549 cgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcatttacg 31580494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31788641 - 31788696
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||| || ||| |||||||||||| ||||| ||||||||    
T  31788641 cgttgtatgctattaacttggatgctgtgagtttgttcgcagattcaccctttacg 31788696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40659826 - 40659771
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  40659826 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 40659771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4228310 - 4228364
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||| |||||||||||||||| || ||| |||||||||||| |||||||||||||    
T  4228310 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttac 4228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 29173631 - 29173577
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||| ||||||||| |||| ||| |||||||||||| ||||||||||||||    
T  29173631 gttgtatgttattaactttggtgttgtgagtttgttcgcagattcatcctttacg 29173577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30420856 - 30420910
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||| |||||||||||||||| || ||| |||||||||||| |||||||||||||    
T  30420856 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttac 30420910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33923890 - 33923936
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  33923890 cgttttatgctattaacttgggtgctgtgagtttgttcgcatattca 33923936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 37994474 - 37994524
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||| ||||||    
T  37994474 tatgctattaacttgggtgttgtgagtttgttcgcagattcatcttttacg 37994524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21570302 - 21570249
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    ||||||||||||||||||||  || |||||||||||||||| ||||| ||||||    
T  21570302 cgttgtatgctattaacttgaatgctgtaagtttgttcgcagattcagccttta 21570249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 38445353 - 38445406
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||| ||||||||| |||| ||| |||||||||||| ||||||||||||||    
T  38445353 ttgtatgttattaactttggtgctgtgagtttgttcgcagattcatcctttacg 38445406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5754621 - 5754673
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| ||||||||||||||    
T  5754621 cgttttatgctattaacatggatgatgtgagtttgttcacatattcatccttt 5754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25622834 - 25622782
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| || ||| ||||||||||||||||||||||||    
T  25622834 cgttttatgctattaacatggatgttgtgagtttgttcgcatattcatccttt 25622782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1421861 - 1421915
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||| ||| ||||| ||||||||    
T  1421861 cgttgtatgctattaacttgggtgttgtgagtttgtttgcagattca-cctttacg 1421915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3309130 - 3309185
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| ||||| |||||| ||||| ||| ||||    
T  3309130 cgttgtatgctattaacttgggtgctgtgagtttattcgcagattcaccctatacg 3309185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4778938 - 4778993
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||| |||||| ||||||| ||| |||||||||||| ||||| ||||||||    
T  4778938 cgttgtatgttattaatttgggtgctgtgagtttgttcgcagattcaccctttacg 4778993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4904060 - 4904005
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||| || ||| |||||||||| | ||||| ||||||||    
T  4904060 cgttgtatgctattaacttggatgttgtgagtttgttcgtagattcagcctttacg 4904005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8806053 - 8806108
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| || ||||||||| ||||||||||||||    
T  8806053 cgttatatgctattaacttggatgttgtgagattgttcgcagattcatcctttacg 8806108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8809464 - 8809519
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||| || ||| |||||||||||| || |||| ||||||    
T  8809464 cgttgtatgctattaacttggatgttgtgagtttgttcgcagatccatcttttacg 8809519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 14955716 - 14955767
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    ||||||| ||||||||| |||| ||| |||||||||||| ||||||||||||    
T  14955716 ttgtatgttattaacttaggtgttgtgagtttgttcgcagattcatccttta 14955767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24461628 - 24461683
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||| |||| ||| ||||||||||||  |||||||||||||    
T  24461628 cgttatatgctattaactttggtgttgtgagtttgttcgcaggttcatcctttacg 24461683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27097322 - 27097267
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||| ||||||||||||||| ||| |||||||| ||| ||||| ||||||||    
T  27097322 cgttgtatactattaacttgggtgttgtgagtttgtttgcagattcaccctttacg 27097267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27949613 - 27949668
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||| || ||| |||||||||| | ||||||| ||||||    
T  27949613 cgttgtatgctattaacttggatgttgtgagtttgttcggagattcatcatttacg 27949668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 30399933 - 30399890
Alignment:
Q  12 attaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||||||| |||| |||||||||||||||| |||||||||||||    
T  30399933 attaacttaggtgttgtaagtttgttcgcagattcatcctttac 30399890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32913427 - 32913482
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| ||| |||||||| ||||||||||||||    
T  32913427 cgttatatgctattaacttggatgttgtgagtatgttcgcagattcatcctttacg 32913482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34600401 - 34600456
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| |||||  ||||||||| || ||||||||||||||    
T  34600401 cgttatatgctattaacttggatgatgcgagtttgttcacagattcatcctttacg 34600456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39641200 - 39641145
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| ||||| |||||||||| |||||| |||||||||||| |||||| |||||||    
T  39641200 cgttatatgcgattaacttggatgatgtgagtttgttcgcaaattcattctttacg 39641145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 4041508 - 4041454
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| ||||||||||||| |||| ||| |||||||||||| ||||| ||||||||    
T  4041508 gttgcatgctattaacttaggtgttgtgagtttgttcgcagattcaccctttacg 4041454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 17151610 - 17151664
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||  || ||| ||||||| |||||||||| ||||||||    
T  17151610 gttgtatgctattaacttgaatgttgtgagtttgtccgcatattcaccctttacg 17151664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 36234190 - 36234240
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| ||||||||| || ||||||||||||||    
T  36234190 tatgctattaacttggatgttgtgagtttgttcacagattcatcctttacg 36234240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 37876517 - 37876475
Alignment:
Q  5 gtatgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    |||||||||||||||||||||||  |||||||||||| |||||    
T  37876517 gtatgctattaacttgggtgatgcgagtttgttcgcagattca 37876475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 11561462 - 11561417
Alignment:
Q  8 tgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||||||||| ||| || |||||||||||||||| |||||||||||    
T  11561462 tgctattaacatggatgttgtaagtttgttcgcagattcatccttt 11561417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 16376125 - 16376170
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    ||||||||| |||||||||| |||||| |||||||||||| |||||    
T  16376125 gttgtatgcgattaacttggatgatgtgagtttgttcgcagattca 16376170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38575379 - 38575326
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||| |||||||||| ||||| || ||| |||||||||||| ||||||||||||    
T  38575379 cgttatatgctattatcttggatgttgtgagtttgttcgcagattcatccttta 38575326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 41327926 - 41327967
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatat 44  Q
    ||||||||||||||||| |||||||| ||||| |||||||||    
T  41327926 ttgtatgctattaacttaggtgatgtgagtttattcgcatat 41327967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 1415748 - 1415788
Alignment:
Q  7 atgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    |||||||||||||||||| ||| |||||||||||| |||||    
T  1415748 atgctattaacttgggtgttgtgagtttgttcgcagattca 1415788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5071160 - 5071108
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| || ||| |||||||||||| |||||||||||    
T  5071160 cgttttatgctattaacatggatgttgtgagtttgttcgcagattcatccttt 5071108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 6174013 - 6174057
Alignment:
Q  11 tattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    ||||||||||| || ||| |||||||||||| |||||||||||||    
T  6174013 tattaacttggatgttgtgagtttgttcgcagattcatcctttac 6174057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 7677788 - 7677752
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgtt 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  7677788 cgttgtatgctattaacttgggtgctgtgagtttgtt 7677752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 10929851 - 10929903
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||| ||||||||||||||| || ||| |||||||| ||||||||| ||||||    
T  10929851 gttgaatgctattaacttggatgctgtgagtttgtttgcatattcacccttta 10929903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19598024 - 19598068
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatatt 45  Q
    |||||||||||||||||||| ||| ||| | ||||||||||||||    
T  19598024 cgttgtatgctattaacttgagtgttgtgaatttgttcgcatatt 19598068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28533869 - 28533829
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgca 41  Q
    |||||||||||||||||||| ||| ||| ||||||||||||    
T  28533869 cgttgtatgctattaacttgagtgttgtgagtttgttcgca 28533829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34480289 - 34480341
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| ||| |||||||| ||| || ||| ||||||||||||||||||||||||    
T  34480289 cgttttattctattaacatggatgttgtgagtttgttcgcatattcatccttt 34480341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41797934 - 41797986
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| || |||||||||||    
T  41797934 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatccttt 41797986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 9e-18; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24583324 - 24583378
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  24583324 cgttgtatgctattaacttgggtgatgtgagtttgttcgcagattcatcctttac 24583378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5984014 - 5984067
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  5984014 cgttgtatgctattaacttgggtgatgtgagtttgttcgcatattcacccttta 5984067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44915817 - 44915872
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||  ||||||||||||| |||||||||||||||||||||||||||    
T  44915817 cgttgtatgctatcgacttgggtgatgtgagtttgttcgcatattcatcctttacg 44915872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9687099 - 9687044
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  9687099 cgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcctttacg 9687044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24583128 - 24583183
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||| |||||||||||||||||| ||||||||| || ||||||||||||||    
T  24583128 cgttgtatgatattaacttgggtgatgtgagtttgttcacagattcatcctttacg 24583183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27456662 - 27456717
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||    
T  27456662 cgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcatcttttacg 27456717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44543450 - 44543505
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| ||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  44543450 cgttttatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacg 44543505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48750363 - 48750418
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||||    
T  48750363 cgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcaccctatacg 48750418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49504509 - 49504454
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  49504509 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacg 49504454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 49627091 - 49627146
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| ||||||| ||| |||||||||||| ||||||||||||||    
T  49627091 cgttgtatgctattaatttgggtgttgtgagtttgttcgcagattcatcctttacg 49627146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14872817 - 14872871
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    ||||||||||||||||||||| || ||| |||||||||||||||||| |||||||    
T  14872817 cgttgtatgctattaacttggatgctgtgagtttgttcgcatattcaccctttac 14872871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7836710 - 7836657
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||| ||||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  7836710 cgttttatgctattaacttgggtgctgtgagtttgttcgcagattcatccttta 7836657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 9172684 - 9172732
Alignment:
Q  8 tgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  9172684 tgctattaacttggatgatgtgagtttgttcgcagattcatcctttacg 9172732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 9180666 - 9180714
Alignment:
Q  8 tgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  9180666 tgctattaacttggatgatgtgagtttgttcgcagattcatcctttacg 9180714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5701446 - 5701501
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  5701446 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 5701501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15431580 - 15431525
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||| |||||| || ||| |||||||||||| ||||||||||||||    
T  15431580 cgttgtatgctattcacttggatgttgtgagtttgttcgcagattcatcctttacg 15431525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29738578 - 29738523
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||| ||||||| ||||| ||||||||    
T  29738578 cgttgtatgctattaacttgggtgctgtgagttcgttcgcagattcaccctttacg 29738523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31317914 - 31317969
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||| || ||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  31317914 cgttgcatcctattaacttgggtgatgtgagtttgttcgcaaattcaccctttacg 31317969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31919167 - 31919222
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||| || ||  |||||||||||| ||||||||||||||    
T  31919167 cgttgtatgctattaacttggatgttgcgagtttgttcgcagattcatcctttacg 31919222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 51872050 - 51872105
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  51872050 cgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 51872105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 7342914 - 7342964
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  7342914 tatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 7342964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 11454129 - 11454179
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  11454129 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 11454179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 34529253 - 34529307
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||| ||||||||||||||||||| |||||||||||| |||||  |||||||    
T  34529253 gttgtatactattaacttgggtgatgtgagtttgttcgcagattcaatctttacg 34529307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35484305 - 35484251
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||  |||||||    
T  35484305 cgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcgccctttac 35484251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19061087 - 19061140
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    ||||||||||||||||||||| || ||| |||||||||||| ||||||| ||||    
T  19061087 cgttgtatgctattaacttggatgttgtgagtttgttcgcacattcatctttta 19061140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 45805713 - 45805668
Alignment:
Q  11 tattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||| |||||| |||||||||||| ||||||||||||||    
T  45805713 tattaacttggatgatgtgagtttgttcgcagattcatcctttacg 45805668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 48217629 - 48217678
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||||||||||||||| || ||| |||||||||||| |||||||||||||    
T  48217629 tatgctattaacttggatgttgtgagtttgttcgcaaattcatcctttac 48217678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 27580037 - 27579989
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| ||||||    
T  27580037 tatgctattaacttgggtgttgtgagtttgttcgcagattcacccttta 27579989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 32395179 - 32395215
Alignment:
Q  4 tgtatgctattaacttgggtgatgtaagtttgttcgc 40  Q
    ||||||||||||||||||||| |||||||||||||||    
T  32395179 tgtatgctattaacttgggtgctgtaagtttgttcgc 32395215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7997976 - 7998031
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||| ||||||||||| |||||| |||||||| ||| ||||||||||||||    
T  7997976 cgttatatgttattaacttggatgatgtgagtttgtttgcagattcatcctttacg 7998031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11462396 - 11462341
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||| | ||||| | ||||||    
T  11462396 cgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccatttacg 11462341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25406178 - 25406123
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||| ||||||    
T  25406178 cgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcttttacg 25406123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31984339 - 31984394
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| | |||||||||| ||| | ||||||||    
T  31984339 cgttgtatgctattaacttgggtgttgtgactttgttcgcagatttaccctttacg 31984394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36775624 - 36775569
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||| || ||| |||||||||||| ||||| ||| ||||    
T  36775624 cgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctatacg 36775569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 38520429 - 38520374
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| ||||||||| || ||||||||||||||    
T  38520429 cgttatatgctattaacttggatgttgtgagtttgttcacaaattcatcctttacg 38520374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45415736 - 45415791
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||  |||||| ||||||| ||| |||||||||||||||||| ||||||||    
T  45415736 cgttgtataatattaatttgggtgttgtgagtttgttcgcatattcaccctttacg 45415791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 47133081 - 47133136
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||| ||||||||||    
T  47133081 cgttatatgctattaacttggatgttgtgagtttgttcgcagatttatcctttacg 47133136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 49648787 - 49648736
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    ||||||| |||||| ||||||||||| ||||||||| ||||||| |||||||    
T  49648787 ttgtatgttattaatttgggtgatgtgagtttgttcacatattcgtccttta 49648736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 50165993 - 50165938
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| ||||||||| || ||||||||||||||    
T  50165993 cgttatatgctattaacttggatgttgtgagtttgttcacagattcatcctttacg 50165938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 51868539 - 51868484
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||| ||||||||||| || ||| |||||||||||| ||||||||||||||    
T  51868539 cgttatatgttattaacttggatgctgtgagtttgttcgcaaattcatcctttacg 51868484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9919575 - 9919629
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||| |||||||||    
T  9919575 cgttatatgctattaacttggatgctgtgagtttgttcgcagatttatcctttac 9919629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 10776374 - 10776320
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||| ||||||||||||||| ||| ||||||||||||  |||| ||||||||    
T  10776374 gttgtattctattaacttgggtgctgtgagtttgttcgcaatttcaccctttacg 10776320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 19715784 - 19715734
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| ||||| |||||| ||||||||||||||    
T  19715784 tatgctattaacttggatgctgtgagtttattcgcagattcatcctttacg 19715734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21947532 - 21947478
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    ||||||||  |||||||||||||||||| |||||||||||| ||| | |||||||    
T  21947532 cgttgtattttattaacttgggtgatgtgagtttgttcgcagatttaccctttac 21947478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31130487 - 31130433
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||| ||| |||||||||||| || ||| ||||||||| ||||||||||||||||    
T  31130487 cgttatattctattaacttggatgctgtgagtttgttcacatattcatcctttac 31130433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 34413005 - 34412951
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||| |||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  34413005 gttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctatacg 34412951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 13144721 - 13144672
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||| |||||||    
T  13144721 tatgctattaacttggatgttgtgagtttgttcgcagattcaccctttac 13144672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 16162012 - 16162061
Alignment:
Q  7 atgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||| |||| ||| |||||||||||| ||||| ||||||||    
T  16162012 atgctattaacttaggtgttgtgagtttgttcgcagattcaccctttacg 16162061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 32677019 - 32676974
Alignment:
Q  11 tattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||| |||||| |||||||||||| ||||||| ||||||    
T  32677019 tattaacttggatgatgtgagtttgttcgcagattcatcttttacg 32676974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 7337576 - 7337524
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||| ||||||||||||||| || ||| |||||||||||| ||||| ||||||    
T  7337576 gttgcatgctattaacttggctgttgtgagtttgttcgcagattcacccttta 7337524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28677921 - 28677869
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| || ||| |||||||||||| |||||||||||    
T  28677921 cgttttatgctattaacatggatgttgtgagtttgttcgcagattcatccttt 28677869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 32879032 - 32879084
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| |||||||||| ||| |||||||| ||| |||||||    
T  32879032 cgttttatgctattaacatgggtgatgtgagtatgttcgcagatttatccttt 32879084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 33817057 - 33817009
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||| ||||||||||| |||||| |||||||||||  ||||||||||||    
T  33817057 tatgttattaacttggatgatgtgagtttgttcgcggattcatccttta 33817009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 33876527 - 33876479
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||| ||||||||||| |||||| |||||||||||  ||||||||||||    
T  33876527 tatgttattaacttggatgatgtgagtttgttcgcggattcatccttta 33876479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 34519322 - 34519370
Alignment:
Q  8 tgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||| |  ||| |||||||||||| ||||||||||||||    
T  34519322 tgctattaacttggatcctgtgagtttgttcgcagattcatcctttacg 34519370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 35584505 - 35584461
Alignment:
Q  12 attaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||| || ||| |||||||||||| ||||||||||||||    
T  35584505 attaacttggatgctgtgagtttgttcgcaaattcatcctttacg 35584461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1236609 - 1236554
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  1236609 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacg 1236554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15344485 - 15344540
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  15344485 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacg 15344540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15433550 - 15433605
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  15433550 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacg 15433605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15524854 - 15524909
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  15524854 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacg 15524909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27110377 - 27110329
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatc 49  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  27110377 cgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcatc 27110329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31013520 - 31013465
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  31013520 cgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 31013465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37971460 - 37971514
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| |||||||    
T  37971460 cgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttac 37971514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 41060174 - 41060120
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||| || ||||||||||| |||||||||||| ||||||||||||||    
T  41060174 gttgtatgctatcaatttgggtgatgtgagtttgttcgcagattcatcctttacg 41060120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 16928667 - 16928614
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  16928667 ttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 16928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7883153 - 7883098
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||| ||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  7883153 cgttgtatcctattaacttgggtgctgtgagtttgttcgcagattcaccctttacg 7883098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9619251 - 9619196
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  9619251 cgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 9619196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11464361 - 11464416
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| |||||| |||||||||| | ||||||||||||||    
T  11464361 cgttatatgctattaacttggatgatgtgagtttgttcgtagattcatcctttacg 11464416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11725870 - 11725925
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| |||||| ||||||||| || ||||||||||||||    
T  11725870 cgttatatgctattaacttggatgatgtgagtttgttcacagattcatcctttacg 11725925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14585854 - 14585909
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  14585854 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacg 14585909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29777409 - 29777464
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  29777409 cgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 29777464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30568233 - 30568178
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| ||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  30568233 cgttttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 30568178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41896694 - 41896749
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  41896694 cgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacg 41896749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18890611 - 18890565
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||    
T  18890611 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattca 18890565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23230820 - 23230866
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||    
T  23230820 cgttgtatgctattaacttgggtgttgtgagtttgttcgcagattca 23230866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 37565768 - 37565718
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  37565768 tatgctattaacttggatgctgtgagtttgttcgcaaattcatcctttacg 37565718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 44578220 - 44578272
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||||||| ||||||||||||| || || |||||||||||    
T  44578220 cgttatatgctattaacttggatgatgtaagtttgatcacagattcatccttt 44578272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3240557 - 3240612
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| ||||| |||||| ||||||||||||||    
T  3240557 cgttatatgctattaacttggatgttgtgagtttattcgcagattcatcctttacg 3240612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4809154 - 4809209
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||| | || ||| |||||||||||| ||||||||||||||    
T  4809154 cgttatatgctattaacttagatgttgtgagtttgttcgcagattcatcctttacg 4809209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7198107 - 7198052
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| ||||||| ||| ||||| |||||| ||||| ||||||||    
T  7198107 cgttgtatgctattaatttgggtgttgtgagtttattcgcagattcaccctttacg 7198052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11267198 - 11267253
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| ||||||||||||  |||||||||||||    
T  11267198 cgttatatgctattaacttggatgctgtgagtttgttcgcagtttcatcctttacg 11267253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15047082 - 15047137
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||  || |||||||||||||||| ||||||| ||||||    
T  15047082 cgttatatgctattaacttgaatgttgtaagtttgttcgcagattcatcttttacg 15047137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40211214 - 40211159
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||  |||||||||| |||||||||| | ||||| ||||||||    
T  40211214 cgttgtatgctattaatctgggtgatgtgagtttgttcgtagattcaccctttacg 40211159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 42046402 - 42046453
Alignment:
Q  5 gtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  42046402 gtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacg 42046453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42447921 - 42447866
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| ||||||||| ||||||||| |||||||    
T  42447921 cgttatatgctattaacttggatgttgtgagtttgttcacatattcattctttacg 42447866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44099830 - 44099775
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||| ||| ||||||||||||||    
T  44099830 cgttatatgctattaacttggatgttgtgagtttgttagcagattcatcctttacg 44099775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 2656065 - 2656115
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| |||||||||||| ||||||| ||||||    
T  2656065 tatgctattaacttggatgctgtgagtttgttcgcaaattcatcatttacg 2656115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5046930 - 5046968
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcg 39  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  5046930 cgttgtatgttattaacttgggtgatgtgagtttgttcg 5046968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 9498488 - 9498438
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| ||||||||| || ||||||||||||||    
T  9498488 tatgctattaacttggatgctgtgagtttgttcacagattcatcctttacg 9498438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10377866 - 10377912
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    |||||||||||||||||||||||| ||| |||||| ||||| |||||    
T  10377866 cgttgtatgctattaacttgggtgctgtgagtttgctcgcagattca 10377912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 14906812 - 14906762
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| |  ||| |||||||||||| ||||||||||||||    
T  14906812 tatgctattaacttggatcctgtgagtttgttcgcagattcatcctttacg 14906762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16794481 - 16794535
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||| |||| ||||||||||| || ||| |||||||||||| |||||||||||||    
T  16794481 cgttatatggtattaacttggatgttgtgagtttgttcgcagattcatcctttac 16794535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 24099163 - 24099113
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| |||||||||||| ||||| ||||||||    
T  24099163 tatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacg 24099113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 25190972 - 25190922
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| | ||||||    
T  25190972 tatgctattaacttgggtgctgtgagtttgttcgcagattcaccttttacg 25190922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 34611999 - 34612049
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| |||||||||||| |||||| |||||||    
T  34611999 tatgctattaacttggatgttgtgagtttgttcgcagattcattctttacg 34612049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 43833908 - 43833862
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    |||||||||||||||||||||||| ||| |||||||| ||| |||||    
T  43833908 cgttgtatgctattaacttgggtgctgtgagtttgtttgcagattca 43833862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 45445718 - 45445668
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| |||||||||||||||||| | ||||||    
T  45445718 tatgctattaacttggatgttgtgagtttgttcgcatattcaccttttacg 45445668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8412434 - 8412381
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||| ||||||||||||||||||| ||| |||||||| ||| ||||| ||||||    
T  8412434 cgttttatgctattaacttgggtgttgtgagtttgtttgcagattcacccttta 8412381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 33896281 - 33896330
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||||||||||||||| || ||| ||||| |||||| |||||||||||||    
T  33896281 tatgctattaacttggatgttgtgagttttttcgcagattcatcctttac 33896330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43192241 - 43192188
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||| |||||||||||||||| || | | |||||||||||| ||||||||||||    
T  43192241 cgttatatgctattaacttggatgttctgagtttgttcgcagattcatccttta 43192188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10338621 - 10338569
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| || ||| ||||||||| ||||||||||||||    
T  10338621 cgttttatgctattaacatggatgttgtgagtttgttcacatattcatccttt 10338569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11162225 - 11162277
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| || ||| ||||||||| ||||||||||||||    
T  11162225 cgttttatgctattaacatggatgttgtgagtttgttcccatattcatccttt 11162277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16247135 - 16247082
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||| |||||  |||||||||||  |||||||| ||||||||    
T  16247135 cgttgtatgctattaactcgggtgtagtaagtttgtt--catattcaccctttacg 16247082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 53807772 - 53807717
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  53807772 cgttgtatgctattaacttgggtggtgtgagtttgttcgcagattcatcctttacg 53807717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 628837 - 628782
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||| ||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  628837 cgttgtattctattaacttgggtgttgtgagtttgttcgcagattcatcctttacg 628782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36906302 - 36906357
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  36906302 cgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcctttacg 36906357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 45568359 - 45568304
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||||||| ||||| |||||| ||||| ||||||||    
T  45568359 cgttgtatgctattaacttgggtgatgtgagtttattcgcagattcaccctttacg 45568304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49552118 - 49552063
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || |||||||||||||||| ||||||||||||||    
T  49552118 cgttatatgctattaacttggatgctgtaagtttgttcgcagattcatcctttacg 49552063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 51923901 - 51923956
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| |||||| ||||    
T  51923901 cgttgtatgctattaacttgggtgttgtgagtttgttcgcatatccatcctatacg 51923956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 48650648 - 48650594
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| |||||||    
T  48650648 cgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttac 48650594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4711656 - 4711709
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||    
T  4711656 cgttgtatgctattaacttgggtgttgtgagtttgtttgcagattcatccttta 4711709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 4821985 - 4822033
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    ||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  4821985 tatgctattaacttgggtgatgtgagtttgttcgcagattcattcttta 4822033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6954610 - 6954555
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||| ||| ||||| ||||||||    
T  6954610 cgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctttacg 6954555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9797448 - 9797393
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||| | ||||||| ||||||||    
T  9797448 cgttgtatgctattaacttgggtgctgtgagtttgtttgtatattcaccctttacg 9797393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9998641 - 9998696
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||| | ||||| ||||||||    
T  9998641 cgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacg 9998696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10108410 - 10108465
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||| | ||||| ||||||||    
T  10108410 cgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacg 10108465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10229650 - 10229705
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||| | ||||| ||||||||    
T  10229650 cgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacg 10229705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21289728 - 21289673
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  21289728 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacg 21289673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 21916656 - 21916707
Alignment:
Q  4 tgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||||||||||||||||| |||||| ||||||||| || |||||||||||||    
T  21916656 tgtatgctattaacttggatgatgtgagtttgttctcagattcatcctttac 21916707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27856339 - 27856394
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||| ||||||||||||||| |||||| |||||||||||| ||||||| ||||||    
T  27856339 cgttgcatgctattaacttggatgatgtgagtttgttcgcagattcatcttttacg 27856394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 38854930 - 38854875
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||| ||||||||||| |||||| ||||| |||||||||||||||||||||    
T  38854930 cgttatatgttattaacttggatgatgtgagttttttcgcatattcatcctttacg 38854875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 38860026 - 38859979
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcat 48  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||    
T  38860026 cgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcat 38859979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43017062 - 43017117
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||| |||| ||| ||||| ||| |||||||||||||||||    
T  43017062 cgttgtatgctattaacttaggtgttgtgagtttattcacatattcatcctttacg 43017117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 43488504 - 43488449
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| ||||||| ||| |||||||||||| ||||||| ||||||    
T  43488504 cgttgtatgctattaatttgggtgctgtgagtttgttcgcagattcatcatttacg 43488449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 46304434 - 46304379
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||| ||| ||| |||||||||||| ||||| ||||||||    
T  46304434 cgttgtatgctattaacttgagtgttgtgagtttgttcgcagattcaccctttacg 46304379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 50194249 - 50194194
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  50194249 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 50194194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 52923031 - 52922976
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||| || ||| |||||||||||| ||||| ||||||||    
T  52923031 cgttgtatgctattaacttggctgctgtgagtttgttcgcagattcaccctttacg 52922976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 3848808 - 3848758
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  3848808 tatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 3848758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8914886 - 8914932
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||||    
T  8914886 cgttgtatgctattaacttgagtgatgtgagtttgttcgcagattca 8914932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21313210 - 21313264
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||||||||||||||||||||||| ||| |||||||||| | ||||| |||||||    
T  21313210 cgttgtatgctattaacttgggtgctgtgagtttgttcggagattcaccctttac 21313264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 25631420 - 25631366
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||| |||| ||||||||||| |||||| |||||||||||| |||||||||||||    
T  25631420 cgttatatgttattaacttggatgatgtgagtttgttcgcagattcatcctttac 25631366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 51303557 - 51303511
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||    
T  51303557 cgttgtatgctattaacttgggtgttgtgagtttgttcgcagattca 51303511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10233244 - 10233297
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||||||||||||||||||||||| ||| |||||||||| | ||||| ||||||    
T  10233244 cgttgtatgctattaacttgggtgctgtgagtttgttcgtacattcacccttta 10233297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30648613 - 30648560
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||    
T  30648613 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttta 30648560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 35175580 - 35175633
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||| ||| ||| |||||||||||| ||||||| ||||||    
T  35175580 ttgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcttttacg 35175633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 42460924 - 42460977
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    ||||||||||||||||||||||  ||| |||||||||||| ||||| |||||||    
T  42460924 gttgtatgctattaacttgggtactgtgagtttgttcgcagattcaccctttac 42460977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1074684 - 1074632
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| ||||||||||||||    
T  1074684 cgttttatgctattaacatggatgatgtgagtttgttcacatattcatccttt 1074632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 7448825 - 7448773
Alignment:
Q  4 tgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| |||||||| |||||||||||| ||||| | ||||||    
T  7448825 tgtatgctattaacttaggtgatgtgagtttgttcgcagattcaccatttacg 7448773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 7456967 - 7456915
Alignment:
Q  4 tgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| |||||||| |||||||||||| ||||| | ||||||    
T  7456967 tgtatgctattaacttaggtgatgtgagtttgttcgcagattcaccatttacg 7456915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11819421 - 11819473
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| ||||||||||||||    
T  11819421 cgttttatgctattaacatggatgatgtgagtttgttcacatattcatccttt 11819473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21533723 - 21533683
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgca 41  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  21533723 cgttgtatgctattaacttgggtgctgtgagtttgttcgca 21533683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25849989 - 25850037
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatc 49  Q
    |||| ||| ||||||||||||||| ||| ||||||||||||||||||||    
T  25849989 cgttatatactattaacttgggtgttgtgagtttgttcgcatattcatc 25850037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7546789 - 7546840
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctt 52  Q
    |||||||||||||||||||||||| ||| |||||||| ||| ||||| ||||    
T  7546789 cgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctt 7546840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17237985 - 17238040
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| |||||| |||||||||||  |||| |||||||||    
T  17237985 cgttatatgctattaacttggatgatgtgagtttgttcgctgattcttcctttacg 17238040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 20987668 - 20987621
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatc 49  Q
    |||||||||||||||||||| |||||| |||||||||| | |||||||    
T  20987668 gttgtatgctattaacttggatgatgtgagtttgttcgtagattcatc 20987621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25162616 - 25162671
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||  ||||||||||||||    
T  25162616 cgttatatgctattaacttggatgttgtgagtttgttcgcggattcatcctttacg 25162671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33580054 - 33580109
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| ||||||||||||||||||| ||| | |||||||||| ||||| ||||||||    
T  33580054 cgttttatgctattaacttgggtgttgtgattttgttcgcagattcaccctttacg 33580109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35499094 - 35499039
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| ||||||||||| |||| || ||||||||| |||||| ||||||||||||||    
T  35499094 cgttatatgctattaatttggatgttgtaagttttttcgcagattcatcctttacg 35499039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44907293 - 44907238
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| ||||||||||| |||| || ||| |||||||||||| ||||||||||||||    
T  44907293 cgttatatgctattaatttggatgttgtgagtttgttcgcagattcatcctttacg 44907238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46934819 - 46934874
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||| | ||||||||||||||    
T  46934819 cgttatatgctattaacttggatgttgtgagtttgttcgtagattcatcctttacg 46934874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 54149165 - 54149220
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||| |||||||||| |||| |||||||  |||| ||||||||    
T  54149165 cgttgtatgctattaacctgggtgatgtgagttagttcgcaggttcaccctttacg 54149220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29503641 - 29503695
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||| |||||||||||||||| |  ||| ||| ||||||||||||||||||||||    
T  29503641 cgttatatgctattaacttggattctgtgagtatgttcgcatattcatcctttac 29503695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 32607654 - 32607704
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||| ||| || ||| |||||||||||| ||||||||||||||    
T  32607654 tatgctattaacctggatgttgtgagtttgttcgcagattcatcctttacg 32607704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 38440480 - 38440430
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| |||||| ||||| ||||||||||||||    
T  38440480 tatgctattaacttggatgctgtgagtttgctcgcagattcatcctttacg 38440430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 50611307 - 50611257
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| |||| |  ||||||||||| ||||||||||||||    
T  50611307 tatgctattaacttggatgatatgggtttgttcgcagattcatcctttacg 50611257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 2342638 - 2342683
Alignment:
Q  11 tattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||| || ||| |||||||||||| ||||||||||||||    
T  2342638 tattaacttggatgctgtgagtttgttcgcagattcatcctttacg 2342683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27706140 - 27706103
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttc 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  27706140 cgttgtatgctattaacttgggtgctgttagtttgttc 27706103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 40556876 - 40556929
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||||||||||||  ||||||||| ||| |||||||||||| ||||| ||||||    
T  40556876 cgttgtatgctatgcacttgggtgttgtgagtttgttcgcagattcacccttta 40556929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 105837 - 105785
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| |||||||||| | |||||||||||    
T  105837 cgttttatgctattaacatggatgatgtgagtttgttcggagattcatccttt 105785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 913106 - 913054
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| || |||||||||||    
T  913106 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatccttt 913054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1165186 - 1165134
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||| ||||| ||||||||||||||    
T  1165186 cgttttatgctattaacatggatgatgtgagtctgttcacatattcatccttt 1165134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16235600 - 16235640
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgca 41  Q
    ||||||||||||||||||||| || ||| ||||||||||||    
T  16235600 cgttgtatgctattaacttggatggtgtgagtttgttcgca 16235640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 36461349 - 36461297
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||||||||||||||||| ||| ||| |||||||| ||| ||||| |||||||    
T  36461349 ttgtatgctattaacttgagtgctgtgagtttgttagcagattcaccctttac 36461297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 40702764 - 40702808
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcc 50  Q
    |||||| ||||| ||| ||||||||||||||||||| ||||||||    
T  40702764 tatgctcttaacatggatgatgtaagtttgttcgcagattcatcc 40702808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 42106462 - 42106514
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| || |||||||||||    
T  42106462 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatccttt 42106514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46178748 - 46178788
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgca 41  Q
    |||| |||||||||||||||| |||||| ||||||||||||    
T  46178748 cgttatatgctattaacttggatgatgtgagtttgttcgca 46178788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7976101 - 7976048
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    ||||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  7976101 cgttgtatgctattaacttaggtgttgtgagtttgttcgcatattcatccttta 7976048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 67915 - 67860
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  67915 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacg 67860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 546207 - 546262
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||    
T  546207 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctatacg 546262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9341565 - 9341510
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  9341565 cgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 9341510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21426600 - 21426545
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||| | ||||||    
T  21426600 cgttgtatgctattaacttgggtgctgtgagtttgttcgcatattcaccgtttacg 21426545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 32327130 - 32327079
Alignment:
Q  5 gtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  32327130 gtatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacg 32327079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33053082 - 33053027
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||| || ||| |||||||||||||||||| ||||||||    
T  33053082 cgttgtatgctattaacttggatgctgtgagtttgttcgcatattcaccctttacg 33053027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 4984456 - 4984406
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  4984456 tatgctattaacttagatgatgtaagtttgttcgcagattcatcctttacg 4984406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 606382 - 606435
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  606382 ttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacg 606435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 12170645 - 12170698
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||||| |||||||    
T  12170645 gttgtatgctattaacttgggtgctgtgagtttgctcgcatattcaccctttac 12170698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8497151 - 8497206
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  8497151 cgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 8497206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10228862 - 10228917
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| |  |||||||||||||||| ||||||||||||||    
T  10228862 cgttatatgctattaacttggatactgtaagtttgttcgcaaattcatcctttacg 10228917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12059667 - 12059612
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  12059667 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 12059612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25064419 - 25064474
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  25064419 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 25064474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33740472 - 33740417
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| | |||| |||||||||||| ||||||||||||||    
T  33740472 cgttatatgctattaacttggataatgtgagtttgttcgcagattcatcctttacg 33740417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 8028007 - 8027957
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||| | |||||| |||||||||||| ||||||||||||||    
T  8028007 tatgctattaactttgatgatgtgagtttgttcgcaaattcatcctttacg 8027957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23128794 - 23128848
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||||||||||||||| ||||||| ||| |||||||||||| ||||| |||||||    
T  23128794 cgttgtatgctattaatttgggtgctgtgagtttgttcgcagattcaccctttac 23128848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 28981354 - 28981408
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||| |||| ||| ||||||||| |||||||| ||||||||    
T  28981354 gttgtatgctattaactttggtgttgtgagtttgttcacatattcaccctttacg 28981408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 3913486 - 3913433
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||| ||| |||||||||||| || || ||||||||    
T  3913486 ttgtatgctattaacttgggtgttgtgagtttgttcgcagatgcaccctttacg 3913433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20226027 - 20226080
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||||||||||||||||||||||  ||| |||||||||||| ||||||| ||||    
T  20226027 cgttgtatgctattaacttgggtattgtgagtttgttcgcaaattcatcattta 20226080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22120011 - 22120064
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||||||||||||||||||||||  ||| |||||||||||| ||||||| ||||    
T  22120011 cgttgtatgctattaacttgggtattgtgagtttgttcgcaaattcatcattta 22120064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 30776845 - 30776894
Alignment:
Q  7 atgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  30776845 atgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 30776894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21507636 - 21507584
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| ||||||||||||||    
T  21507636 cgttttatgctattaacatggatgatgtgagtttgttcacatattcatccttt 21507584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 679284 - 679339
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||| |||| ||| |||||||||| | ||||| ||||||||    
T  679284 cgttgtatgctattaacttaggtgttgtgagtttgttcgtagattcaccctttacg 679339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4088643 - 4088698
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| ||||| |||||||||| || ||| |||||||||||| ||||||||||||||    
T  4088643 cgttatatgccattaacttggatgctgtgagtttgttcgcagattcatcctttacg 4088698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12653127 - 12653182
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||| ||||    
T  12653127 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctgtacg 12653182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17237180 - 17237125
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| ||| |||||||| ||||||||||||||    
T  17237180 cgttatatgctattaacttggatgttgtgagtgtgttcgcagattcatcctttacg 17237125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17334936 - 17334991
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||| ||||||    
T  17334936 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcatttacg 17334991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23947211 - 23947156
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||| | ||||||||||||||    
T  23947211 cgttatatgctattaacttggatgttgtgagtttgttcgtagattcatcctttacg 23947156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30493708 - 30493763
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||| |||||| ||| | |||||||||| ||||| ||||||||    
T  30493708 cgttgtatgctattaacctgggtgttgtgaatttgttcgcagattcaccctttacg 30493763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30608429 - 30608374
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||| || ||| || ||||| ||| ||||||||||||||    
T  30608429 cgttgtatgctattaacttggatgttgtgagattgtttgcaaattcatcctttacg 30608374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31296996 - 31297051
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| |||| |||| | ||||||||||||| |||| ||||||||    
T  31296996 cgttgtatgctattaatttggatgatttgagtttgttcgcattttcaccctttacg 31297051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32802722 - 32802777
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||| |||||| ||||||| ||| |||||| ||||||||||| ||||||||    
T  32802722 cgttgtatgatattaaattgggtgctgtgagtttgatcgcatattcaccctttacg 32802777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33110794 - 33110849
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| ||||| || ||||||||||||||||||    
T  33110794 cgttatatgctattaacttggatgttgtgagtttatttgcatattcatcctttacg 33110849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35001773 - 35001828
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||| ||||||||||    
T  35001773 cgttatatgctattaacttggatgttgtgagtttgttcgcagattaatcctttacg 35001828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8196301 - 8196247
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||| |||||||||||||||| || ||| ||| |||||||| |||||||||||||    
T  8196301 cgttatatgctattaacttggatgctgtgagtgtgttcgcaaattcatcctttac 8196247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14802003 - 14802049
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    ||||||||||||||||||||| || ||| |||||||||||| |||||    
T  14802003 cgttgtatgctattaacttggatgctgtgagtttgttcgcagattca 14802049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 29255359 - 29255305
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||||| ||| ||||||||| || ||||| || |||||    
T  29255359 gttgtatgctattaacttgggtgttgtgagtttgttcacagattcacccattacg 29255305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2488461 - 2488513
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| | | || |||||||||||||||||||| |||||||    
T  2488461 cgttttatgctattaacatagatgttgtaagtttgttcgcatatttatccttt 2488513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 7515113 - 7515061
Alignment:
Q  4 tgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||| |  ||| |||||||||||| ||||| ||||||||    
T  7515113 tgtatgctattaacttggtttctgtgagtttgttcgcaaattcaccctttacg 7515061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12654100 - 12654052
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatc 49  Q
    |||| |||||||||||| ||| |||||| |||||||||||| |||||||    
T  12654100 cgttttatgctattaacatggatgatgtgagtttgttcgcagattcatc 12654052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23654589 - 23654641
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| || |||||||||||    
T  23654589 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatccttt 23654641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 30813396 - 30813448
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| || |||||||||||    
T  30813396 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatccttt 30813448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8001460 - 8001405
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  8001460 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacg 8001405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35133124 - 35133179
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||| ||| ||||    
T  35133124 cgttgtatgctattaacttgggtgatgtgagtttgttcgcagattcaccctatacg 35133179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37837372 - 37837317
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| ||||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  37837372 cgttttatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacg 37837317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48316726 - 48316673
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||    
T  48316726 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcacccttta 48316673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32684851 - 32684906
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || |||||||||||||| | ||||||||||||||    
T  32684851 cgttatatgctattaacttggatgctgtaagtttgttcgtagattcatcctttacg 32684906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34899521 - 34899466
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||| || ||| |||||||||||| ||||| ||||||||    
T  34899521 cgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacg 34899466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40993334 - 40993389
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||| |||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  40993334 cgttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 40993389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42978787 - 42978842
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||| ||||||| ||||| ||||||||    
T  42978787 cgttgtatgctattaacttgggtgttgtgagttcgttcgcagattcaccctttacg 42978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46822198 - 46822253
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  46822198 cgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 46822253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48061599 - 48061654
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| | | |||||||||||| ||||| ||||||||    
T  48061599 cgttgtatgctattaacttgggtgttatgagtttgttcgcagattcaccctttacg 48061654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 433580 - 433530
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  433580 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 433530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9450051 - 9449998
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||||||||||||||| || |||| ||| |||||||||||||||||| ||||||    
T  9450051 cgttgtatgctattaatttaggtgttgtgagtttgttcgcatattcacccttta 9449998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35261480 - 35261533
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    ||||||||||||||||||||| |  ||| |||||||||||| ||||||||||||    
T  35261480 cgttgtatgctattaacttggatattgtgagtttgttcgcagattcatccttta 35261533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12141222 - 12141166
Alignment:
Q  1 cgttgtatgctattaacttggg-tgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||| || ||| |||||||||||||||||| | ||||||    
T  12141222 cgttgtatgctattaacttgggttgttgtgagtttgttcgcatattcaccttttacg 12141166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31482013 - 31481973
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgca 41  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  31482013 cgttgtatgctattaacttgggtgttgtatgtttgttcgca 31481973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 46822655 - 46822611
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||    
T  46822655 ttgtatgctattaacttggatgttgtgagtttgttcgcatattca 46822611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7640669 - 7640614
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||| ||||||    
T  7640669 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcatttacg 7640614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 9137735 - 9137782
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||||||||||| ||| || |||||||||||||||| |||||||||||    
T  9137735 tatgctattaacatggatgttgtaagtttgttcgcagattcatccttt 9137782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35496069 - 35496014
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| |||||| |||||||||| | |||||||| |||||    
T  35496069 cgttatatgctattaacttggatgatgtgagtttgttcgtagattcatcccttacg 35496014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39171504 - 39171449
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| | | |||||||| ||| ||||| ||||||||    
T  39171504 cgttgtatgctattaacttgggtgctatgagtttgtttgcagattcaccctttacg 39171449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 45349713 - 45349658
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| ||||||||||||||||||| ||| ||||||||||||  |||| ||||||||    
T  45349713 cgttttatgctattaacttgggtgttgtgagtttgttcgcaggttcaccctttacg 45349658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46339237 - 46339292
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||| ||||||||||| |||||| ||||||||| || ||||||||||||||    
T  46339237 cgttatatgttattaacttggatgatgtgagtttgttcacagattcatcctttacg 46339292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48930884 - 48930939
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||  ||| |||||||||||| ||||| ||| ||||    
T  48930884 cgttgtatgctattaacttgggtattgtgagtttgttcgcagattcaacctatacg 48930939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 1485145 - 1485095
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || |||||  ||||||||| ||||||||||||||    
T  1485145 tatgctattaacttggatgttgtaaacttgttcgcagattcatcctttacg 1485095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13592403 - 13592349
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||| |||||||||||||| | || ||| |||||||||||| |||||||||||||    
T  13592403 cgttatatgctattaacttcgatgctgtgagtttgttcgcagattcatcctttac 13592349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 19404663 - 19404617
Alignment:
Q  9 gctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    ||||||||||||| || ||| |||||||||||| |||||||||||||    
T  19404663 gctattaacttggatgctgtgagtttgttcgcagattcatcctttac 19404617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22927764 - 22927710
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||| |||||||| ||||||| || ||| |||||||||||| |||||||||||||    
T  22927764 cgttatatgctatcaacttggttgctgtgagtttgttcgcaaattcatcctttac 22927710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 42408525 - 42408575
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| |||||||||||| ||||||| ||||||    
T  42408525 tatgctattaacttggatgctgtgagtttgttcgcagattcatcttttacg 42408575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17222894 - 17222841
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||| ||||||| |||||||| || ||| |||||||||||| ||||||||||||    
T  17222894 cgttatatgctagtaacttggatgttgtgagtttgttcgcagattcatccttta 17222841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28407832 - 28407779
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    ||||||||||||||||||||| || ||| |||||||||||| ||| | ||||||    
T  28407832 cgttgtatgctattaacttggatgctgtgagtttgttcgcagatttacccttta 28407779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 38649141 - 38649096
Alignment:
Q  8 tgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||||||||| ||| || ||| ||||||||||||||||||||||||    
T  38649141 tgctattaacatggatgttgtgagtttgttcgcatattcatccttt 38649096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5348506 - 5348466
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgca 41  Q
    ||||||||||||||||||||| || ||| ||||||||||||    
T  5348506 cgttgtatgctattaacttggatgttgttagtttgttcgca 5348466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 331
Target Start/End: Original strand, 5793068 - 5793096
Alignment:
Q  303 atagtatggggtgtttcataaacatgagt 331  Q
    |||||||||||||||||||||||||||||    
T  5793068 atagtatggggtgtttcataaacatgagt 5793096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13796843 - 13796803
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgca 41  Q
    ||||||||||||||||||||| || ||| ||||||||||||    
T  13796843 cgttgtatgctattaacttggatgttgtgagtttgttcgca 13796803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 14627780 - 14627736
Alignment:
Q  12 attaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||| || ||| | |||||||||||||||||||||||||    
T  14627780 attaacttggatgctgtgattttgttcgcatattcatcctttacg 14627736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 19297052 - 19297100
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    ||||||||||| ||||||| ||| |||||||||||| ||||| ||||||    
T  19297052 tatgctattaatttgggtgttgtgagtttgttcgcagattcacccttta 19297100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21991001 - 21991053
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| || ||| ||||||||| ||||||||||||||    
T  21991001 cgttttatgctattaacatggatgttgtgagtttgttcacatattcatccttt 21991053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36579123 - 36579071
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| || |||||||||||    
T  36579123 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatccttt 36579071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41288295 - 41288347
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| || |||||||||||    
T  41288295 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatccttt 41288347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42311463 - 42311516
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||  |||||||||||| ||||||||||||||    
T  42311463 cgttatatgctattaacttggatgctg--agtttgttcgcaaattcatcctttacg 42311516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6012052 - 6011997
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| ||||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  6012052 cgttttatgctattaacttgggtgatgtgagtttgttcgcagattcaccctttacg 6011997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13422107 - 13422162
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||||||||||||||||||    
T  13422107 cgttttatgctattaacttggatgttgtgagtttgttcgcatattcatcctttacg 13422162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34945567 - 34945622
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  34945567 cgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 34945622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38597971 - 38598026
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  38597971 cgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcaccctttacg 38598026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 10332456 - 10332406
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  10332456 tatgctattaacttgggtgatgtgagtttgttcacagattcatcctttacg 10332406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7241969 - 7242024
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  7241969 cgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 7242024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7247144 - 7247199
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  7247144 cgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 7247199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9113639 - 9113584
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| | | |||||||||||| ||||| ||||||||    
T  9113639 cgttgtatgctattaacttgggtgttctgagtttgttcgcagattcaccctttacg 9113584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13007403 - 13007458
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||| ||| ||||| ||||||||    
T  13007403 cgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctttacg 13007458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24229698 - 24229643
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||  |||||||    
T  24229698 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcactctttacg 24229643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24874703 - 24874758
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||| |||||||||||||||||| | ||||||| || ||||||||||||||    
T  24874703 cgttgtatgttattaacttgggtgatgtgaatttgttcacagattcatcctttacg 24874758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25980331 - 25980386
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| ||||||||||||||||||||||| |||||||| ||| ||||| ||||||||    
T  25980331 cgttatatgctattaacttgggtgatgtgagtttgtttgcagattcaccctttacg 25980386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26825604 - 26825659
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||| | ||||| ||||||||    
T  26825604 cgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacg 26825659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28540820 - 28540765
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  28540820 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacg 28540765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41184334 - 41184279
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  41184334 cgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 41184279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 14211402 - 14211456
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  14211402 gttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacg 14211456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43148912 - 43148966
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||| |||||||||||||||| || ||| |||||||||||| |||||||||||||    
T  43148912 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttac 43148966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 8096407 - 8096358
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| |||||||    
T  8096407 tatgctattaacttgggtggtgtgagtttgttcgcaaattcaccctttac 8096358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 8088124 - 8088072
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||||||||||||||||||||| | | |||||||||||| ||||||| |||||    
T  8088124 ttgtatgctattaacttgggtgttatgagtttgttcgcagattcatcttttac 8088072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 31391666 - 31391614
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||| ||||||    
T  31391666 gttgtatgctattaacttggatgttgtgagtttgttcgcaaattcacccttta 31391614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3271296 - 3271241
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || | | |||||||||||| ||||||||||||||    
T  3271296 cgttatatgctattaacttggatgttatgagtttgttcgcagattcatcctttacg 3271241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 9425374 - 9425327
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| ||||||||||| |||||| ||||||||||||||||| ||||||    
T  9425374 tatgttattaacttggatgatgtgagtttgttcgcatattcgtccttt 9425327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11768184 - 11768239
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||| ||||| |||||| |||||||||||| ||||||||| ||||    
T  11768184 cgttatatgctattatcttggatgatgtgagtttgttcgcagattcatcctatacg 11768239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 15710873 - 15710920
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||||||||||| ||| || ||| ||||||||||||||||||||||||    
T  15710873 tatgctattaacatggatgttgtgagtttgttcgcatattcatccttt 15710920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16981477 - 16981532
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| |||||| |||||||    
T  16981477 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcattctttacg 16981532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19103381 - 19103326
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||| |||| | | |||||||||||| ||||||||| ||||    
T  19103381 cgttgtatgctattaactttggtgctatgagtttgttcgcagattcatcctatacg 19103326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26878022 - 26877968
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||| |||||||||||| || ||| |||||||||||| ||||||||||||||    
T  26878022 cgttgtat-ctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 26877968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35475232 - 35475177
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| ||| |||||| ||||||||||||||||    
T  35475232 cgttatatgctattaacttggatgttgtgagtatgttcgtatattcatcctttacg 35475177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37986027 - 37985972
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||  |||||| |||||||| ||| ||||||| ||||||    
T  37986027 cgttgtatgctattaacttgaatgatgtgagtttgtttgcagattcatcttttacg 37985972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2979220 - 2979174
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    ||||||||||||||||||||| || ||| |||||||||||| |||||    
T  2979220 cgttgtatgctattaacttggatgttgtgagtttgttcgcagattca 2979174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4954177 - 4954231
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||| |||||||||||||| | || ||| ||||||||| ||||||||||||||||    
T  4954177 cgttatatgctattaactttgatgttgtgagtttgttcacatattcatcctttac 4954231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11976849 - 11976795
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||| |||| ||||||||||| || ||| |||||||||||| |||||||||||||    
T  11976849 cgttttatgttattaacttggatgttgtgagtttgttcgcagattcatcctttac 11976795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 15571662 - 15571716
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||||| ||| |||||||||| | |||  |||||||||    
T  15571662 gttgtatgctattaacttgggtgttgtgagtttgttcgtagatttgtcctttacg 15571716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 27266748 - 27266698
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| |||||||||||| ||||||| ||||||    
T  27266748 tatgctattaacttggatgctgtgagtttgttcgcagattcatcatttacg 27266698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 38007536 - 38007586
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||| ||| ||||||||| |||||||| | ||||||    
T  38007536 tatgctattaacttgggtgctgtgagtttgttcacatattcaccttttacg 38007586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14082310 - 14082257
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    ||||||||||||||||||| | |||||  |||||||||||| ||||| ||||||    
T  14082310 cgttgtatgctattaacttcgatgatgggagtttgttcgcagattcacccttta 14082257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15571092 - 15571141
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcc 50  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||    
T  15571092 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcc 15571141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 19121088 - 19121141
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||| |||||| |||| |||||| |||||||||||| ||||| ||||||||    
T  19121088 ttgtatgatattaatttggatgatgtgagtttgttcgcagattcaccctttacg 19121141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 28235777 - 28235826
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||||||||||||||| || ||| |||||||||||| ||||||| |||||    
T  28235777 tatgctattaacttggatgttgtgagtttgttcgcagattcatcatttac 28235826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34881902 - 34881955
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||| |||||||||||||||| || ||| |||||||| ||| ||||||||||||    
T  34881902 cgttatatgctattaacttggatgttgtgagtttgtttgcagattcatccttta 34881955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 6217075 - 6217119
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    |||||||||||||||||| ||| ||| |||||||||||| |||||    
T  6217075 ttgtatgctattaacttgagtgctgtgagtttgttcgcagattca 6217119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6681659 - 6681607
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| | | |||||||||||||||| || |||||||||||    
T  6681659 cgttttatgctattaacattgatgatgtaagtttgttcacagattcatccttt 6681607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11734627 - 11734575
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| || ||| ||||||||| ||||||||||||||    
T  11734627 cgttttatgctattaacatggttgttgtgagtttgttcacatattcatccttt 11734575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17096023 - 17095971
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| || |||||||||||    
T  17096023 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatccttt 17095971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23428582 - 23428634
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| |||||| |||||||    
T  23428582 cgttttatgctattaacatggatgatgtgagtttgttcacatatttatccttt 23428634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27241394 - 27241446
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| || ||| |||||||||||| |||||||||||    
T  27241394 cgttttatgctattaacgtggatgttgtgagtttgttcgcagattcatccttt 27241446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29154544 - 29154592
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatc 49  Q
    |||| |||||||||||| ||| |||||| ||| ||||||||||||||||    
T  29154544 cgttttatgctattaacatggatgatgtgagtatgttcgcatattcatc 29154592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39531194 - 39531142
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| || |||||||||||    
T  39531194 cgttttatgctattaacatggatgatgtgagtttgttcacaaattcatccttt 39531142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2520974 - 2521029
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  2520974 cgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 2521029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19853426 - 19853371
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  19853426 cgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacg 19853371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 47320326 - 47320271
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||| |||||||    
T  47320326 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcattctttacg 47320271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 53616544 - 53616489
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  53616544 cgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcctttacg 53616489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 29966522 - 29966576
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  29966522 gttgtatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 29966576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 21686153 - 21686101
Alignment:
Q  4 tgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||| |||||||||||||| ||| |||||||||||||||||| ||||||||    
T  21686153 tgtatgttattaacttgggtgctgtgagtttgttcgcatattcaccctttacg 21686101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9645418 - 9645363
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  9645418 cgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 9645363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11299924 - 11299869
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||| |||||||||||||| ||| |||||||||||| ||||||||||||||    
T  11299924 cgttttatgttattaacttgggtgttgtgagtttgttcgcagattcatcctttacg 11299869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27652138 - 27652193
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||| ||| ||| |||||||||||| ||||||||| ||||    
T  27652138 cgttgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcctatacg 27652193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31891201 - 31891146
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  31891201 cgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcaccctatacg 31891146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 38706604 - 38706549
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| |||||| |||||||||||| ||||||| ||||||    
T  38706604 cgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcttttacg 38706549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 51318180 - 51318235
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| |||||| ||||||||| || ||||||||||||||    
T  51318180 cgttatatgctattaacttggatgatgtgagtttgttcacagattcatcctttacg 51318235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 20569457 - 20569507
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| | |||| |||||||||||| ||||||||||||||    
T  20569457 tatgctattaacttggataatgtgagtttgttcgcagattcatcctttacg 20569507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 22301050 - 22301100
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  22301050 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 22301100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 34024327 - 34024277
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  34024327 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacg 34024277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 43095824 - 43095878
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||| |||| |||||| |||||||||||| ||||||| ||||||    
T  43095824 gttgtatgctattaatttggatgatgtgagtttgttcgcagattcatcatttacg 43095878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 10496534 - 10496583
Alignment:
Q  5 gtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||||||||||||||||||| | | |||||||||||| ||||||||||||    
T  10496534 gtatgctattaacttgggtgctttgagtttgttcgcagattcatccttta 10496583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44596855 - 44596900
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattc 46  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||    
T  44596855 cgttgtatgctattaacttgggtgctgtgagtttgttcgcagattc 44596900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 56199297 - 56199346
Alignment:
Q  7 atgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||| || ||| |||||||||||| ||||||||||||||    
T  56199297 atgctattaacttggatgctgtgagtttgttcgcagattcatcctttacg 56199346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10359442 - 10359394
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatc 49  Q
    |||| |||||||||||||||| |||||| |||||||||||| |||||||    
T  10359442 cgttatatgctattaacttggatgatgtgagtttgttcgcaaattcatc 10359394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 12493493 - 12493541
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    ||||||||||||||| ||| ||| |||||||||| ||||||||||||||    
T  12493493 tatgctattaacttgcgtgctgtgagtttgttcgtatattcatccttta 12493541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 17949236 - 17949184
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    ||||||| |||||||||||||| ||| |||||||||||| ||||| |||||||    
T  17949236 ttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttac 17949184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 17953088 - 17953036
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    ||||||| |||||||||||||| ||| |||||||||||| ||||| |||||||    
T  17953088 ttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttac 17953036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 32766709 - 32766761
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||||||||||||||||||||||| ||| ||||||||| || ||||| |||||    
T  32766709 cgttgtatgctattaacttgggtgctgtgagtttgttctcagattcacccttt 32766761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 33921250 - 33921294
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattc 46  Q
    |||||||||||||||||||| || ||| |||||||||||||||||    
T  33921250 gttgtatgctattaacttggatgttgtgagtttgttcgcatattc 33921294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4644053 - 4644108
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| || ||||||||| ||||||||||||||    
T  4644053 cgttatatgctattaacttggatgttgtgagcttgttcgcagattcatcctttacg 4644108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9528771 - 9528716
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||  || ||| |||||||||||| ||||||||||||||    
T  9528771 cgttatatgctattaacttgaatgttgtgagtttgttcgcagattcatcctttacg 9528716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13634310 - 13634365
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| | |||||||| | ||||| ||||||||    
T  13634310 cgttgtatgctattaacttgggtgctgtgaatttgttcggagattcaccctttacg 13634365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19896537 - 19896482
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||| |||| | |||||||||||| ||||| | ||||||    
T  19896537 cgttgtatgctattaacttggatgatatgagtttgttcgcagattcaccatttacg 19896482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22611378 - 22611433
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||| |||||| ||||||| ||| |||||||||||| ||||| ||||||||    
T  22611378 cgttgtatggtattaaattgggtgctgtgagtttgttcgcagattcaccctttacg 22611433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43510391 - 43510446
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||  ||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  43510391 cgttgtatgtcattaacttgggtgctgtgagtttgttcgcagattcaccctttacg 43510446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44947607 - 44947662
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||| ||||||||||| || ||| |||||||||||| ||||||||||||||    
T  44947607 cgttatatgttattaacttggatgttgtgagtttgttcgcagattcatcctttacg 44947662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48257546 - 48257491
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||| |  ||| |||||||||||| ||||| ||||||||    
T  48257546 cgttgtatgctattaacttggattttgtgagtttgttcgcagattcaccctttacg 48257491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 49410418 - 49410473
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||| ||||||||||| |||||| |||||||||||  ||||||||||||||    
T  49410418 cgttatatgttattaacttggatgatgtgagtttgttcgctgattcatcctttacg 49410473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 53811223 - 53811277
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| || ||||||||| ||||| ||||||||    
T  53811223 cgttgtatgctattaacttgggtgttgtgag-ttgttcgcagattcaccctttacg 53811277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 56040560 - 56040505
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||| || ||| |||||| ||||| ||||| ||||||||    
T  56040560 cgttgtatgctattaacttggatgctgtgagtttgctcgcagattcaccctttacg 56040505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 25274083 - 25274133
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||| | || ||| |||||||||||| ||||||||||||||    
T  25274083 tatgctattaacttagatgttgtgagtttgttcgcagattcatcctttacg 25274133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 28857601 - 28857651
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||  | ||| |||||||||||| ||||||||||||||    
T  28857601 tatgctattaacttggcagctgtgagtttgttcgcagattcatcctttacg 28857651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29960863 - 29960817
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    ||||||||||| |||||||||||| ||| |||||||||||| |||||    
T  29960863 cgttgtatgcttttaacttgggtgctgtgagtttgttcgcagattca 29960817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 35261392 - 35261442
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||| || ||| |||||||| ||| ||||||||||||||    
T  35261392 tatgctattaacttggatgttgtgagtttgtttgcagattcatcctttacg 35261442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 35348507 - 35348557
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||| ||| |||||||| ||| ||||| ||||||||    
T  35348507 tatgctattaacttgggtgttgtgagtttgtttgcagattcaccctttacg 35348557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 36194903 - 36194949
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    ||||||||||||||||||||| || ||| |||||||||||| |||||    
T  36194903 cgttgtatgctattaacttggatgttgtgagtttgttcgcagattca 36194949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1532103 - 1532156
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||| |||||||||||||||| || ||| || ||||||||| ||||||||||||    
T  1532103 cgttatatgctattaacttggatgttgtgagcttgttcgcagattcatccttta 1532156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2115482 - 2115429
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||| |||||||||||||||| |  ||| |||||||||||| ||||||||||||    
T  2115482 cgttatatgctattaacttggatactgtgagtttgttcgcagattcatccttta 2115429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9178548 - 9178601
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    |||||||||||||||||||| |||| || ||||||||||||  |||| ||||||    
T  9178548 cgttgtatgctattaacttgtgtgacgtgagtttgttcgcagtttcacccttta 9178601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4622493 - 4622445
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatc 49  Q
    |||| |||||||||||| ||| |||||| |||||||||||| |||||||    
T  4622493 cgttttatgctattaacatggatgatgtgagtttgttcgcaaattcatc 4622445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7084279 - 7084331
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| || |||||||||||    
T  7084279 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatccttt 7084331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8712846 - 8712898
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| || |||||||||||    
T  8712846 cgttttatgctattaacatggatgatgtgagtttgttcacaaattcatccttt 8712898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9662177 - 9662229
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||| ||||| ||||||||||||||    
T  9662177 cgttttatgctattaacatggatgatgtgagtctgttcacatattcatccttt 9662229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27091047 - 27091099
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| | | || |||||||||||||||||||| |||||||    
T  27091047 cgttttatgctattaacatagatgttgtaagtttgttcgcatatttatccttt 27091099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30416418 - 30416366
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatccttt 53  Q
    |||| |||||||||||| ||| |||||| ||||||||| || |||||||||||    
T  30416418 cgttttatgctattaacatggatgatgtgagtttgttcacagattcatccttt 30416366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 37465677 - 37465713
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgtt 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  37465677 cgttgtatgctattaacttgggtgttgtgagtttgtt 37465713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 47158420 - 47158456
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgtt 37  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  47158420 cgttgtatgctattaacttggatgatgtgagtttgtt 47158456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 51888119 - 51888071
Alignment:
Q  7 atgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    ||||||||||||| |||| ||| ||||||||||||||| || |||||||    
T  51888119 atgctattaacttaggtgttgtgagtttgttcgcatatccaccctttac 51888071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 14780 - 14732
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  14780 tatgctattaacttgggtgctgtgagtttgttcgcaaattcatccttta 14732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 50953 - 51005
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||| |||||||    
T  50953 ttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttac 51005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5581 - 5636
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| |  |||||||||||||||| ||||||||||||||    
T  5581 cgttatatgctattaacttggatactgtaagtttgttcgcaaattcatcctttacg 5636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 71784 - 71729
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||||||||||||||||||| ||| |||||||||| | ||||| ||||||||    
T  71784 cgttgtatgctattaacttgggtgctgtgagtttgttcggagattcaccctttacg 71729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 71213 - 71159
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    ||||||||||||||||||||||| |||||||||||| | | ||| ||||||||||    
T  71213 gttgtatgctattaacttgggtgttgtaagtttgtttgtagattaatcctttacg 71159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 7892 - 7941
Alignment:
Q  3 ttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctt 52  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||| ||||    
T  7892 ttgtatgttattaacttgggtgttgtgagtttgttcgcatattcaccctt 7941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 26984 - 26936
Alignment:
Q  6 tatgctattaacttgggtgatgtaagtttgttcgcatattcatccttta 54  Q
    ||||||||||||||| ||| ||| |||||||||| ||||||||||||||    
T  26984 tatgctattaacttgcgtgctgtgagtttgttcgtatattcatccttta 26936  T

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Target: scaffold0146 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16214 - 16159
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| |||||| |||||||||||  |||| |||||||||    
T  16214 cgttatatgctattaacttggatgatgtgagtttgttcgctgattcttcctttacg 16159  T

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Target: scaffold0136 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9956 - 9901
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| ||||||||| ||||||||| ||| |||||||||||| ||||| ||||||||    
T  9956 cgttttatgctattgacttgggtgctgtgagtttgttcgcagattcaccctttacg 9901  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 83330 - 83275
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||||||| ||||||    
T  83330 cgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcatttacg 83275  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 58002 - 57947
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||| |||||||||||||||| || ||| |||||||||||| ||| ||||||||||    
T  58002 cgttatatgctattaacttggatgctgtgagtttgttcgcagatttatcctttacg 57947  T

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Target: scaffold0884 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 1886 - 1832
Alignment:
Q  2 gttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttacg 56  Q
    |||||||| |||||||||||||| | | |||||||||||| ||||| ||||||||    
T  1886 gttgtatgttattaacttgggtgttatgagtttgttcgcagattcaccctttacg 1832  T

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Target: scaffold0127 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15667 - 15713
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattca 47  Q
    |||| ||||||||||||||||||| ||| |||||||||||| |||||    
T  15667 cgttatatgctattaacttgggtgctgtgagtttgttcgcagattca 15713  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 65956 - 65902
Alignment:
Q  1 cgttgtatgctattaacttgggtgatgtaagtttgttcgcatattcatcctttac 55  Q
    |||||||||||||||||||| ||| | | |||||||||||| ||||| |||||||    
T  65956 cgttgtatgctattaacttgagtgttatgagtttgttcgcagattcaccctttac 65902  T

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