View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9628_low_25 (Length: 319)

Name: NF9628_low_25
Description: NF9628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9628_low_25
NF9628_low_25
[»] chr6 (27 HSPs)
chr6 (11-204)||(5692733-5692926)
chr6 (11-181)||(5174244-5174414)
chr6 (11-152)||(5275990-5276131)
chr6 (82-254)||(5276130-5276303)
chr6 (5-126)||(5380461-5380582)
chr6 (35-114)||(5340679-5340758)
chr6 (10-117)||(5093035-5093142)
chr6 (5-108)||(5422298-5422401)
chr6 (59-117)||(5149599-5149657)
chr6 (10-117)||(5160395-5160502)
chr6 (5-87)||(5107707-5107789)
chr6 (27-117)||(5358031-5358121)
chr6 (268-305)||(287414-287451)
chr6 (268-305)||(5457412-5457449)
chr6 (268-305)||(9388791-9388828)
chr6 (268-305)||(33487833-33487870)
chr6 (32-116)||(5184754-5184838)
chr6 (33-108)||(5429722-5429797)
chr6 (126-209)||(5429824-5429907)
chr6 (266-301)||(6418135-6418170)
chr6 (266-305)||(12106064-12106103)
chr6 (267-305)||(231105-231143)
chr6 (14-108)||(5366610-5366704)
chr6 (267-305)||(34301832-34301870)
chr6 (268-305)||(4844400-4844437)
chr6 (268-305)||(8743188-8743225)
chr6 (268-305)||(30248647-30248684)
[»] chr4 (23 HSPs)
chr4 (26-117)||(4323731-4323822)
chr4 (26-117)||(4356865-4356956)
chr4 (267-305)||(25708678-25708716)
chr4 (268-305)||(1859144-1859181)
chr4 (268-305)||(6807429-6807466)
chr4 (268-304)||(29427493-29427529)
chr4 (270-305)||(54676549-54676584)
chr4 (26-112)||(4332762-4332848)
chr4 (267-305)||(5743659-5743697)
chr4 (267-305)||(30771527-30771565)
chr4 (267-305)||(34273219-34273257)
chr4 (267-305)||(45921430-45921468)
chr4 (267-305)||(47806859-47806897)
chr4 (267-305)||(52977981-52978019)
chr4 (268-305)||(4035825-4035862)
chr4 (268-305)||(5375557-5375594)
chr4 (268-305)||(9328240-9328277)
chr4 (268-305)||(32032993-32033030)
chr4 (268-305)||(33413518-33413555)
chr4 (268-305)||(44294789-44294826)
chr4 (268-305)||(45742806-45742843)
chr4 (265-305)||(15241477-15241517)
chr4 (268-304)||(26626003-26626039)
[»] chr2 (20 HSPs)
chr2 (267-305)||(39833999-39834037)
chr2 (268-305)||(5664638-5664675)
chr2 (268-305)||(25624733-25624770)
chr2 (265-305)||(8716892-8716932)
chr2 (267-305)||(2438224-2438262)
chr2 (267-305)||(7491843-7491881)
chr2 (267-305)||(27560205-27560243)
chr2 (268-305)||(8990204-8990241)
chr2 (268-305)||(11201683-11201720)
chr2 (268-301)||(11201947-11201980)
chr2 (268-305)||(17408294-17408331)
chr2 (268-305)||(18970729-18970766)
chr2 (268-305)||(20252210-20252247)
chr2 (268-305)||(34062665-34062702)
chr2 (268-305)||(34883848-34883885)
chr2 (268-305)||(36131028-36131065)
chr2 (268-305)||(40607702-40607739)
chr2 (268-305)||(41450516-41450553)
chr2 (265-305)||(8912874-8912914)
chr2 (267-299)||(10757984-10758016)
[»] scaffold0025 (1 HSPs)
scaffold0025 (268-305)||(65637-65674)
[»] chr8 (23 HSPs)
chr8 (268-305)||(11798605-11798642)
chr8 (265-305)||(51095-51135)
chr8 (261-305)||(2944272-2944316)
chr8 (266-305)||(39029176-39029215)
chr8 (267-305)||(1774341-1774379)
chr8 (267-305)||(9035539-9035577)
chr8 (267-305)||(28192175-28192213)
chr8 (267-305)||(44251121-44251159)
chr8 (268-305)||(8251933-8251970)
chr8 (268-305)||(8951428-8951465)
chr8 (268-305)||(13153928-13153965)
chr8 (268-305)||(18754144-18754181)
chr8 (268-305)||(28572046-28572083)
chr8 (268-305)||(28579639-28579676)
chr8 (268-301)||(32475231-32475264)
chr8 (268-305)||(32675757-32675794)
chr8 (268-305)||(34490517-34490554)
chr8 (268-305)||(34568490-34568527)
chr8 (268-305)||(36786467-36786504)
chr8 (268-305)||(40784891-40784928)
chr8 (267-304)||(41014503-41014540)
chr8 (268-300)||(26990567-26990599)
chr8 (273-305)||(44580879-44580911)
[»] chr7 (18 HSPs)
chr7 (268-305)||(44547426-44547463)
chr7 (267-305)||(26255095-26255133)
chr7 (267-305)||(39197717-39197755)
chr7 (268-305)||(7449270-7449307)
chr7 (268-305)||(19920563-19920600)
chr7 (268-305)||(21295151-21295188)
chr7 (268-305)||(29286037-29286074)
chr7 (268-305)||(32814433-32814470)
chr7 (268-305)||(32872375-32872412)
chr7 (268-305)||(33858866-33858903)
chr7 (268-305)||(36698131-36698168)
chr7 (268-305)||(38858298-38858335)
chr7 (268-305)||(39871613-39871650)
chr7 (267-304)||(40300229-40300266)
chr7 (268-305)||(41026096-41026133)
chr7 (268-305)||(41252361-41252398)
chr7 (268-305)||(48521029-48521066)
chr7 (274-302)||(10475965-10475993)
[»] chr5 (14 HSPs)
chr5 (268-305)||(32147294-32147331)
chr5 (267-305)||(1265948-1265986)
chr5 (268-305)||(5527974-5528011)
chr5 (268-305)||(6673228-6673265)
chr5 (267-304)||(7951561-7951598)
chr5 (268-305)||(9828393-9828430)
chr5 (265-302)||(14570893-14570930)
chr5 (268-305)||(14913648-14913685)
chr5 (268-305)||(16127259-16127296)
chr5 (268-305)||(22527692-22527729)
chr5 (268-305)||(26894873-26894910)
chr5 (268-305)||(40004409-40004446)
chr5 (268-300)||(13661124-13661156)
chr5 (268-304)||(34662204-34662240)
[»] chr3 (30 HSPs)
chr3 (268-305)||(23700785-23700822)
chr3 (268-305)||(23719240-23719277)
chr3 (268-305)||(23737696-23737733)
chr3 (268-305)||(43701178-43701215)
chr3 (265-304)||(4024049-4024088)
chr3 (266-305)||(26593765-26593804)
chr3 (267-302)||(45049025-45049060)
chr3 (267-305)||(10220932-10220970)
chr3 (267-305)||(14428609-14428647)
chr3 (267-305)||(21756485-21756523)
chr3 (268-302)||(46049727-46049761)
chr3 (267-305)||(46049986-46050024)
chr3 (267-305)||(49127198-49127236)
chr3 (268-305)||(7181350-7181387)
chr3 (268-305)||(9499497-9499534)
chr3 (268-305)||(12050392-12050429)
chr3 (268-305)||(12683182-12683219)
chr3 (268-305)||(22103929-22103966)
chr3 (268-305)||(25149122-25149159)
chr3 (268-305)||(35868083-35868120)
chr3 (268-301)||(36099228-36099261)
chr3 (268-305)||(37728713-37728750)
chr3 (268-305)||(43868103-43868140)
chr3 (268-305)||(44543782-44543819)
chr3 (268-305)||(45252773-45252810)
chr3 (268-301)||(51283802-51283835)
chr3 (268-305)||(51284062-51284099)
chr3 (268-305)||(53271593-53271630)
chr3 (268-305)||(53361855-53361892)
chr3 (265-301)||(52058982-52059018)
[»] chr1 (23 HSPs)
chr1 (268-305)||(39750381-39750418)
chr1 (267-302)||(36695118-36695153)
chr1 (267-302)||(36711219-36711254)
chr1 (267-305)||(943637-943675)
chr1 (267-305)||(15811232-15811270)
chr1 (267-305)||(30290264-30290302)
chr1 (267-305)||(39363194-39363232)
chr1 (267-305)||(44649628-44649666)
chr1 (267-305)||(49907020-49907058)
chr1 (268-305)||(1039381-1039418)
chr1 (268-305)||(1046287-1046324)
chr1 (268-305)||(4102714-4102751)
chr1 (268-305)||(11741397-11741434)
chr1 (268-305)||(23541979-23542016)
chr1 (268-305)||(36694854-36694891)
chr1 (268-305)||(36710955-36710992)
chr1 (268-305)||(37951949-37951986)
chr1 (268-305)||(39497433-39497470)
chr1 (268-305)||(45039412-45039449)
chr1 (268-305)||(46075867-46075904)
chr1 (268-305)||(50007975-50008012)
chr1 (268-305)||(52431174-52431211)
chr1 (269-305)||(30289862-30289898)
[»] scaffold0604 (1 HSPs)
scaffold0604 (268-305)||(3782-3819)
[»] scaffold0122 (1 HSPs)
scaffold0122 (268-305)||(12065-12102)
[»] scaffold0029 (1 HSPs)
scaffold0029 (268-305)||(51682-51719)
[»] scaffold0012 (1 HSPs)
scaffold0012 (268-305)||(47640-47677)
[»] scaffold0008 (1 HSPs)
scaffold0008 (268-305)||(259122-259159)


Alignment Details
Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 5692926 - 5692733
Alignment:
Q  11 ataggacaaatagtgctgcctgtgttctacgatgttgatccctccgaggtacgtcaccaaaccggtgagtttggaaaagcatttcaaagtctcttgaaca 110  Q
    ||||| || |||||| |||| |||||||| ||||||||||| || || ||||| |||||||| ||||||||||||||||| || ||||||||||||| ||    
T  5692926 atagggcagatagtgttgccggtgttctatgatgttgatccttcagatgtacgacaccaaacaggtgagtttggaaaagcgttccaaagtctcttgagca 5692827  T
Q  111 gaatttcgaataagaaagacgcttccttgaaatggagagatgtgctccgtgaggttgctggccttgctggcatcgtagttctaaattccaggta 204  Q
    ||||||| || |||| ||||   ||  ||||||||||||| | |||  ||||||||||||| ||||||||| | ||||||| ||||| ||||||    
T  5692826 gaatttcaaagaagacagacaagtcgctgaaatggagagacgcgcttagtgaggttgctgggcttgctggctttgtagttccaaatttcaggta 5692733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 5174244 - 5174414
Alignment:
Q  11 ataggacaaatagtgctgcctgtgttctacgatgttgatccctccgaggtacgtcaccaaaccggtgagtttggaaaagcatttcaaagtctcttgaaca 110  Q
    ||||| || |||||| |||| |||||||| ||||||||||| || || ||||| |||||||| ||||||||||||||||| || ||||||||||||| ||    
T  5174244 atagggcagatagtgttgccggtgttctatgatgttgatccttcggatgtacgacaccaaacaggtgagtttggaaaagcgttccaaagtctcttgagca 5174343  T
Q  111 gaatttcgaataagaaagacgcttccttgaaatggagagatgtgctccgtgaggttgctggccttgctggc 181  Q
    ||||||| || ||||||  | | ||| |||||||||||||||  || ||||||| |||||  |||||||||    
T  5174344 gaatttcaaagaagaaaagcacgtccctgaaatggagagatgcacttcgtgaggctgctgagcttgctggc 5174414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 5275990 - 5276131
Alignment:
Q  11 ataggacaaatagtgctgcctgtgttctacgatgttgatccctccgaggtacgtcaccaaaccggtgagtttggaaaagcatttcaaagtctcttgaaca 110  Q
    ||||| || |||||| |||| |||||||| ||||||||||| || || ||||| |||||||| ||||||||||||||||| || ||||||||||||| ||    
T  5275990 atagggcagatagtgttgccggtgttctatgatgttgatccttcagatgtacgacaccaaacaggtgagtttggaaaagcgttccaaagtctcttgagca 5276089  T
Q  111 gaatttcgaataagaaagacgcttccttgaaatggagagatg 152  Q
    ||||||| || ||||||  | | ||| |||||| ||||||||    
T  5276090 gaatttcaaagaagaaaagcacgtccctgaaattgagagatg 5276131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 254
Target Start/End: Original strand, 5276130 - 5276303
Alignment:
Q  82 tggaaaagcatttcaaagtctcttgaacagaatttcgaataagaaagacgcttccttgaaatggagagatgtgctccgtgaggttgctggccttgctggc 181  Q
    ||||||||| || ||||||||||||| ||||||||  || ||||||  | | ||| |||||||||||||||  || |||||||||||||   ||||||||    
T  5276130 tggaaaagcgttccaaagtctcttgagcagaattttaaagaagaaaagcacatccctgaaatggagagatgcacttcgtgaggttgctgagattgctggc 5276229  T
Q  182 atcgtagttctaaattccaggtaa-ttaattcaaccattaaagtgcttctaaattggagatgttaaaccaattg 254  Q
     | ||||||| ||||| ||||||| ||||||||||| ||| | | |||||| ||||||||||||| ||||||||    
T  5276230 tttgtagttccaaatttcaggtaatttaattcaaccgttacaatacttctatattggagatgttataccaattg 5276303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 5380461 - 5380582
Alignment:
Q  5 agaagcataggacaaatagtgctgcctgtgttctacgatgttgatccctccgaggtacgtcaccaaaccggtgagtttggaaaagcatttcaaagtctct 104  Q
    |||| ||||| ||| |||||||| || |||||||| |||||||||||||  ||||||||||||||||| |||||||||||| |||| ||| |||||||||    
T  5380461 agaaccatagcacagatagtgctaccggtgttctatgatgttgatcccttggaggtacgtcaccaaactggtgagtttggacaagcttttgaaagtctct 5380560  T
Q  105 tgaacagaatttcgaataagaa 126  Q
    ||| || | ||||||| |||||    
T  5380561 tgagcaaactttcgaagaagaa 5380582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 5340679 - 5340758
Alignment:
Q  35 ttctacgatgttgatccctccgaggtacgtcaccaaaccggtgagtttggaaaagcatttcaaagtctcttgaacagaat 114  Q
    |||||||||||||||||||| ||  ||||||| ||||| || |||||||||||||||||||||| ||| |||||||||||    
T  5340679 ttctacgatgttgatccctcagaaatacgtcatcaaacaggagagtttggaaaagcatttcaaaatcttttgaacagaat 5340758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 5093035 - 5093142
Alignment:
Q  10 cataggacaaatagtgctgcctgtgttctacgatgttgatccctccgaggtacgtcaccaaaccggtgagtttggaaaagcatttcaaagtctcttgaac 109  Q
    |||||| || |||||  |||| |||||||||||||| |||||||| || ||||||||||| |  || |||||||| ||||||||||||| |||||| ||     
T  5093035 catagggcagatagttgtgccagtgttctacgatgtagatccctctgaagtacgtcaccagaaaggcgagtttggtaaagcatttcaaaatctcttaaat 5093134  T
Q  110 agaatttc 117  Q
    ||||||||    
T  5093135 agaatttc 5093142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 5422298 - 5422401
Alignment:
Q  5 agaagcataggacaaatagtgctgcctgtgttctacgatgttgatccctccgaggtacgtcaccaaaccggtgagtttggaaaagcatttcaaagtctct 104  Q
    |||| ||| |||||||| || ||||| ||||||| ||| || ||||| ||||| |||||||  ||||||||||| ||||||||||||||||||| ||| |    
T  5422298 agaaccattggacaaattgttctgccggtgttcttcgacgtagatccatccgaagtacgtcgtcaaaccggtgaatttggaaaagcatttcaaaatcttt 5422397  T
Q  105 tgaa 108  Q
    ||||    
T  5422398 tgaa 5422401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 5149657 - 5149599
Alignment:
Q  59 gtacgtcaccaaaccggtgagtttggaaaagcatttcaaagtctcttgaacagaatttc 117  Q
    ||||||||||||||  |||||||||| ||||||||||||||||||||||| ||||||||    
T  5149657 gtacgtcaccaaacaagtgagtttggcaaagcatttcaaagtctcttgaatagaatttc 5149599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 5160502 - 5160395
Alignment:
Q  10 cataggacaaatagtgctgcctgtgttctacgatgttgatccctccgaggtacgtcaccaaaccggtgagtttggaaaagcatttcaaagtctcttgaac 109  Q
    |||||| || |||||  |||| |||||||||||||| |||||||| || ||||||||||| |  ||  ||||||| ||||||||||||| |||||| ||     
T  5160502 catagggcagatagttttgccagtgttctacgatgtagatccctctgaagtacgtcaccagaaaggcaagtttggtaaagcatttcaaaatctcttaaat 5160403  T
Q  110 agaatttc 117  Q
    ||||||||    
T  5160402 agaatttc 5160395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 5107789 - 5107707
Alignment:
Q  5 agaagcataggacaaatagtgctgcctgtgttctacgatgttgatccctccgaggtacgtcaccaaaccggtgagtttggaaa 87  Q
    ||||||||||| ||  | ||||| || |||||||| |||||||||||||| || |||||||| ||||| ||||||||||||||    
T  5107789 agaagcatagggcaggtggtgcttccggtgttctatgatgttgatccctcagaagtacgtcatcaaactggtgagtttggaaa 5107707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 5358121 - 5358031
Alignment:
Q  27 tgcctgtgttctacgatgttgatccctccgaggtacgtcaccaaaccggtgagtttggaaaagcatttcaaagtctcttgaacagaatttc 117  Q
    |||| |||||||||| ||| ||||| || || |||||| | ||||| |||||||| |||||||||||||||||||| ||||| || |||||    
T  5358121 tgccagtgttctacggtgtagatccatctgaagtacgtaatcaaactggtgagttcggaaaagcatttcaaagtctattgaaaaggatttc 5358031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 287451 - 287414
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  287451 tactccctccgtccctaattataagacctttttgagaa 287414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 5457412 - 5457449
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  5457412 tactccctccgtccctaattataagacctttttgagaa 5457449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 9388828 - 9388791
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  9388828 tactccctccgtccctaattataagacctttttgagaa 9388791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 33487833 - 33487870
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  33487833 tactccctccgtccctaattataagacctttttgagaa 33487870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 5184838 - 5184754
Alignment:
Q  32 gtgttctacgatgttgatccctccgaggtacgtcaccaaaccggtgagtttggaaaagcatttcaaagtctcttgaacagaattt 116  Q
    ||||||||| |||| || ||||| || |||||||| || || || |||||||||| ||| ||||||||||| ||||||| |||||    
T  5184838 gtgttctaccatgtagacccctctgaagtacgtcatcagacaggcgagtttggaatagcttttcaaagtcttttgaacaaaattt 5184754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 5429722 - 5429797
Alignment:
Q  33 tgttctacgatgttgatccctccgaggtacgtcaccaaaccggtgagtttggaaaagcatttcaaagtctcttgaa 108  Q
    ||||||||| ||| ||||| ||  | ||||| || |||| |||||| ||||||||||| |||||||||||||||||    
T  5429722 tgttctacggtgtagatccatctcaagtacgacatcaaatcggtgactttggaaaagcctttcaaagtctcttgaa 5429797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 5429824 - 5429907
Alignment:
Q  126 aagacgcttccttgaaatggagagatgtgctccgtgaggttgctggccttgctggcatcgtagttctaaattccaggtaattaa 209  Q
    |||||| ||| |||||||||||||| |  || |||||||  |||| |||||||||  | |||||| ||||||||||||||||||    
T  5429824 aagacgattcattgaaatggagagacgcacttcgtgaggcagctgaccttgctggatttgtagttttaaattccaggtaattaa 5429907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 301
Target Start/End: Complemental strand, 6418170 - 6418135
Alignment:
Q  266 gttactccctctgtccctaattataagacctttttg 301  Q
    ||||||||||| ||||||||||||||||||||||||    
T  6418170 gttactccctccgtccctaattataagacctttttg 6418135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 305
Target Start/End: Complemental strand, 12106103 - 12106064
Alignment:
Q  266 gttactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  12106103 gttactctctccgtccctaattataagacctttttgagaa 12106064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Complemental strand, 231143 - 231105
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  231143 ttactccctccgtccctaattataagacccttttgagaa 231105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 108
Target Start/End: Original strand, 5366610 - 5366704
Alignment:
Q  14 ggacaaatagtgctgcctgtgttctacgatgttgatccctccgaggtacgtcaccaaaccggtgagtttggaaaagcatttcaaagtctcttgaa 108  Q
    |||||||| || || || ||||||| | |||| ||||| || || || ||||| ||||||||||| || |||||||||||||||| ||| |||||    
T  5366610 ggacaaattgttcttccagtgttcttcaatgtagatccatcggaagtccgtcatcaaaccggtgaattcggaaaagcatttcaaattcttttgaa 5366704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Complemental strand, 34301870 - 34301832
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  34301870 ttactccctccgtccctaattataagacccttttgagaa 34301832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 4844400 - 4844437
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  4844400 tactccctccgtccctaattataagacccttttgagaa 4844437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 8743188 - 8743225
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  8743188 tactccctccgtccctaattataagacccttttgagaa 8743225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 30248647 - 30248684
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  30248647 tactccctccgtccctaattataagacccttttgagaa 30248684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 4323822 - 4323731
Alignment:
Q  26 ctgcctgtgttctacgatgttgatccctccgaggtacgtcaccaaaccggtgagtttggaaaagcatttcaaagtctcttgaacagaatttc 117  Q
    |||||||||||||||||||| ||||| || || || ||||| ||||| ||||||||||| ||| |||||| || ||| ||||||||||||||    
T  4323822 ctgcctgtgttctacgatgtcgatccttctgaagttcgtcatcaaactggtgagtttggtaaatcatttctaaatctattgaacagaatttc 4323731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 4356865 - 4356956
Alignment:
Q  26 ctgcctgtgttctacgatgttgatccctccgaggtacgtcaccaaaccggtgagtttggaaaagcatttcaaagtctcttgaacagaatttc 117  Q
    ||||| |||||||| |||||||| || ||||| || ||||  ||||||||||| ||||| ||| ||||||||| ||| ||||||||||||||    
T  4356865 ctgccagtgttctatgatgttgacccttccgaagttcgtcgtcaaaccggtgactttggtaaatcatttcaaaatcttttgaacagaatttc 4356956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 305
Target Start/End: Complemental strand, 25708716 - 25708678
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  25708716 ttactccctccgtccctaattataagacctttttgagaa 25708678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 1859144 - 1859181
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  1859144 tactccctccgtccctaattataagacctttttgagaa 1859181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 6807429 - 6807466
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||||||||||||||||||||| |||||||||    
T  6807429 tactccctctgtccctaattataagacccttttgagaa 6807466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 304
Target Start/End: Original strand, 29427493 - 29427529
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgaga 304  Q
    |||||||||||||||||||||||||| ||||||||||    
T  29427493 tactccctctgtccctaattataagatctttttgaga 29427529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 305
Target Start/End: Original strand, 54676549 - 54676584
Alignment:
Q  270 ctccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||| ||||||||||||||||||||||||||||    
T  54676549 ctccctccgtccctaattataagacctttttgagaa 54676584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 4332762 - 4332848
Alignment:
Q  26 ctgcctgtgttctacgatgttgatccctccgaggtacgtcaccaaaccggtgagtttggaaaagcatttcaaagtctcttgaacaga 112  Q
    ||||||||||||||||||||  ||||||| || || |||   ||||| ||||| ||||| ||||| ||||||| ||| |||||||||    
T  4332762 ctgcctgtgttctacgatgtacatccctcggaagttcgtagtcaaacaggtgactttggtaaagcttttcaaaatcttttgaacaga 4332848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Complemental strand, 5743697 - 5743659
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  5743697 ttactccctccgtccctaattataagacccttttgagaa 5743659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 30771527 - 30771565
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  30771527 ttactccctccgtccctaattataagacccttttgagaa 30771565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Complemental strand, 34273257 - 34273219
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  34273257 ttactccctccgtccctaattataagacccttttgagaa 34273219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 45921430 - 45921468
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  45921430 ttactacctttgtccctaattataagacctttttgagaa 45921468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 47806859 - 47806897
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  47806859 ttactccctccgtccctaattataagacccttttgagaa 47806897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 52977981 - 52978019
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  52977981 ttactccctccgtccctaattataagacccttttgagaa 52978019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 4035825 - 4035862
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  4035825 tactccctccgtccctaattataagacccttttgagaa 4035862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 5375594 - 5375557
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  5375594 tactccctccgtccctaattataagacccttttgagaa 5375557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 9328277 - 9328240
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  9328277 tactccctccgtccctaattataagacccttttgagaa 9328240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 32033030 - 32032993
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  32033030 tactccctccgtccctaattataagacccttttgagaa 32032993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 33413518 - 33413555
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  33413518 tactccctccgtccctaattataagacccttttgagaa 33413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 44294789 - 44294826
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  44294789 tactccctccgtccctaattataagacccttttgagaa 44294826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 45742843 - 45742806
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  45742843 tactccctccgtccctaattataagacccttttgagaa 45742806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 305
Target Start/End: Original strand, 15241477 - 15241517
Alignment:
Q  265 agttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||||| |||||||||||||||||  |||||||||    
T  15241477 agttactccctccgtccctaattataagactcttttgagaa 15241517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 304
Target Start/End: Complemental strand, 26626039 - 26626003
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgaga 304  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  26626039 tactccctccgtccctaattataagacccttttgaga 26626003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 305
Target Start/End: Complemental strand, 39834037 - 39833999
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  39834037 ttactccctcagtccctaattataagacctttttgagaa 39833999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 5664638 - 5664675
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  5664638 tactccctccgtccctaattataagacctttttgagaa 5664675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 25624733 - 25624770
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  25624733 tactccctccgtccctaattataagacctttttgagaa 25624770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 305
Target Start/End: Complemental strand, 8716932 - 8716892
Alignment:
Q  265 agttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  8716932 agttactccctccgtccctaattataagacccttttgagaa 8716892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 2438224 - 2438262
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  2438224 ttactccctccgtccctaattataagacccttttgagaa 2438262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 7491843 - 7491881
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  7491843 ttactccctccgtccctaattataagacccttttgagaa 7491881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 27560205 - 27560243
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  27560205 ttactccctccgtccctaattataagacccttttgagaa 27560243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 8990204 - 8990241
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  8990204 tactccctccgtccctaattataagatctttttgagaa 8990241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 11201683 - 11201720
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  11201683 tactccctccgtccctaattataagacccttttgagaa 11201720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 301
Target Start/End: Complemental strand, 11201980 - 11201947
Alignment:
Q  268 tactccctctgtccctaattataagacctttttg 301  Q
    |||||||||||||||||||||||||||| |||||    
T  11201980 tactccctctgtccctaattataagacccttttg 11201947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 17408331 - 17408294
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  17408331 tactccctccgtccctaattataagacccttttgagaa 17408294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 18970766 - 18970729
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  18970766 tactacctctgtccctaattataagacccttttgagaa 18970729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 20252210 - 20252247
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  20252210 tactccctccgtccctaattataagacccttttgagaa 20252247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 34062702 - 34062665
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  34062702 tactccctccgtccctaattataagacccttttgagaa 34062665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 34883885 - 34883848
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  34883885 tactccctccgtccctaattataagacccttttgagaa 34883848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 36131065 - 36131028
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  36131065 tactccctccgtccctaattataagacccttttgagaa 36131028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 40607702 - 40607739
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  40607702 tactccctccgtccctaattataagacccttttgagaa 40607739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 41450516 - 41450553
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  41450516 tactccctccgtccctaattataagacccttttgagaa 41450553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 305
Target Start/End: Complemental strand, 8912914 - 8912874
Alignment:
Q  265 agttactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||| |||| |||||||||||||||||| |||||||||    
T  8912914 agttactacctccgtccctaattataagacccttttgagaa 8912874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 10758016 - 10757984
Alignment:
Q  267 ttactccctctgtccctaattataagacctttt 299  Q
    |||||||||| ||||||||||||||||||||||    
T  10758016 ttactccctccgtccctaattataagacctttt 10757984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 65674 - 65637
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  65674 tactccctccgtccctaattataagacctttttgagaa 65637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 11798605 - 11798642
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||||||||||||||||||||| |||||||||    
T  11798605 tactccctctgtccctaattataagacccttttgagaa 11798642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 305
Target Start/End: Complemental strand, 51135 - 51095
Alignment:
Q  265 agttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  51135 agttactccctccgtccctaattataagacccttttgagaa 51095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 2944316 - 2944272
Alignment:
Q  261 aaacagttactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||| |||||||||| |||||||||||||||||| |||||||||    
T  2944316 aaacaattactccctccgtccctaattataagacccttttgagaa 2944272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 305
Target Start/End: Original strand, 39029176 - 39029215
Alignment:
Q  266 gttactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  39029176 gttactccctccgtccctaattataagacccttttgagaa 39029215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 1774341 - 1774379
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  1774341 ttactccctccgtccctaattataagacccttttgagaa 1774379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Complemental strand, 9035577 - 9035539
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  9035577 ttactccctccgtccctaattataagaccattttgagaa 9035539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Complemental strand, 28192213 - 28192175
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  28192213 ttactccctccgtccctaattataagacccttttgagaa 28192175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Complemental strand, 44251159 - 44251121
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  44251159 ttactccctccgtccctaattataagaccattttgagaa 44251121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 8251970 - 8251933
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  8251970 tactccctccgtccctaattataagacccttttgagaa 8251933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 8951465 - 8951428
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  8951465 tactccctccgtccctaattataagacccttttgagaa 8951428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 13153928 - 13153965
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  13153928 tactccctccgtccctaattataagacccttttgagaa 13153965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 18754144 - 18754181
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  18754144 tactccctccgtccctaattataagacccttttgagaa 18754181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 28572046 - 28572083
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  28572046 tactccctccgtccctaattataagacccttttgagaa 28572083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 28579639 - 28579676
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  28579639 tactccctccgtccctaattataagacccttttgagaa 28579676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 301
Target Start/End: Complemental strand, 32475264 - 32475231
Alignment:
Q  268 tactccctctgtccctaattataagacctttttg 301  Q
    |||||||||||||||||||||||||||| |||||    
T  32475264 tactccctctgtccctaattataagacccttttg 32475231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 32675794 - 32675757
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  32675794 tactccctccgtccctaattataagacccttttgagaa 32675757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 34490517 - 34490554
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  34490517 tactccctccgtccctaattataagatctttttgagaa 34490554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 34568490 - 34568527
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  34568490 tactccctccgtccctaattataagacccttttgagaa 34568527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 36786467 - 36786504
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  36786467 tacttcctccgtccctaattataagacctttttgagaa 36786504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 40784891 - 40784928
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  40784891 tactacctccgtccctaattataagacctttttgagaa 40784928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 304
Target Start/End: Original strand, 41014503 - 41014540
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgaga 304  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  41014503 ttactccctccgtccctaattataagatctttttgaga 41014540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 300
Target Start/End: Original strand, 26990567 - 26990599
Alignment:
Q  268 tactccctctgtccctaattataagaccttttt 300  Q
    ||||||||| |||||||||||||||||||||||    
T  26990567 tactccctccgtccctaattataagaccttttt 26990599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 305
Target Start/End: Complemental strand, 44580911 - 44580879
Alignment:
Q  273 cctctgtccctaattataagacctttttgagaa 305  Q
    |||| ||||||||||||||||||||||||||||    
T  44580911 cctccgtccctaattataagacctttttgagaa 44580879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 44547426 - 44547463
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  44547426 tactccctccgtccctaattataagacctttttgagaa 44547463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 26255095 - 26255133
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  26255095 ttactccctccgtccctaattataagacccttttgagaa 26255133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 39197717 - 39197755
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  39197717 ttactccctccgtccctaattataagacccttttgagaa 39197755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 7449270 - 7449307
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  7449270 tactccctccgtccctaattataagaccattttgagaa 7449307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 19920563 - 19920600
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  19920563 tactccctccgtccctaattataagacccttttgagaa 19920600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 21295151 - 21295188
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  21295151 tactccctccgtccctaattataagacccttttgagaa 21295188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 29286074 - 29286037
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  29286074 tactccctccgtccctaattataagacccttttgagaa 29286037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 32814433 - 32814470
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  32814433 tactccctccgtccctaattataagacccttttgagaa 32814470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 32872412 - 32872375
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  32872412 tactccctccgtccctaattataagacccttttgagaa 32872375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 33858903 - 33858866
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  33858903 tactccctccgtccctaattataagacccttttgagaa 33858866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 36698168 - 36698131
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  36698168 tactccctccgtccctaattataagacccttttgagaa 36698131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 38858298 - 38858335
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  38858298 tactccctccgtccctaattataagacccttttgagaa 38858335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 39871650 - 39871613
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  39871650 tactccctccgtccctaattataagacccttttgagaa 39871613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 304
Target Start/End: Original strand, 40300229 - 40300266
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgaga 304  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  40300229 ttactccctccgtccctaattataagacccttttgaga 40300266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 41026133 - 41026096
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  41026133 tactccctccgtccctaattataagacccttttgagaa 41026096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 41252398 - 41252361
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  41252398 tactccctccgtccctaattataagacccttttgagaa 41252361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 48521029 - 48521066
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  48521029 tactccctccgtccctaattataagacccttttgagaa 48521066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 10475993 - 10475965
Alignment:
Q  274 ctctgtccctaattataagacctttttga 302  Q
    |||||||||||||||||||||||||||||    
T  10475993 ctctgtccctaattataagacctttttga 10475965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000005; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 32147294 - 32147331
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  32147294 tactccctccgtccctaattataagacctttttgagaa 32147331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 1265948 - 1265986
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  1265948 ttactccctccgtccctaattataagacccttttgagaa 1265986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 5527974 - 5528011
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  5527974 tactccctccgtccttaattataagacctttttgagaa 5528011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 6673265 - 6673228
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  6673265 tactccctccgtccctaattataagacccttttgagaa 6673228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 304
Target Start/End: Original strand, 7951561 - 7951598
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgaga 304  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  7951561 ttactccctccgtccctaattataagacccttttgaga 7951598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 9828393 - 9828430
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  9828393 tactccctccgtccctaattataagacccttttgagaa 9828430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 302
Target Start/End: Complemental strand, 14570930 - 14570893
Alignment:
Q  265 agttactccctctgtccctaattataagacctttttga 302  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  14570930 agttactacctccgtccctaattataagacctttttga 14570893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 14913648 - 14913685
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  14913648 tactccctccgtccctaattataagacccttttgagaa 14913685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 16127259 - 16127296
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  16127259 tactccctccgtccctaattataagacccttttgagaa 16127296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 22527692 - 22527729
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  22527692 tactccctccgtccctaattataagacccttttgagaa 22527729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 26894910 - 26894873
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  26894910 tactccctccgtccctaattataagacccttttgagaa 26894873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 40004446 - 40004409
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  40004446 tactccctccgtccctaattataagacccttttgagaa 40004409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 300
Target Start/End: Complemental strand, 13661156 - 13661124
Alignment:
Q  268 tactccctctgtccctaattataagaccttttt 300  Q
    ||||||||| |||||||||||||||||||||||    
T  13661156 tactccctccgtccctaattataagaccttttt 13661124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 304
Target Start/End: Original strand, 34662204 - 34662240
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgaga 304  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  34662204 tactccctccgtccctaattataagacccttttgaga 34662240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 23700822 - 23700785
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  23700822 tactccctccgtccctaattataagacctttttgagaa 23700785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 23719277 - 23719240
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  23719277 tactccctccgtccctaattataagacctttttgagaa 23719240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 23737733 - 23737696
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  23737733 tactccctccgtccctaattataagacctttttgagaa 23737696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 43701178 - 43701215
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||||||||||||||||||||| |||||||||    
T  43701178 tactccctctgtccctaattataagacccttttgagaa 43701215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 304
Target Start/End: Original strand, 4024049 - 4024088
Alignment:
Q  265 agttactccctctgtccctaattataagacctttttgaga 304  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  4024049 agttactccctccgtccctaattataagacccttttgaga 4024088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 305
Target Start/End: Complemental strand, 26593804 - 26593765
Alignment:
Q  266 gttactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  26593804 gttactccctccgtccctaattataagacccttttgagaa 26593765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 45049060 - 45049025
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttga 302  Q
    ||||||||||||||| ||||||||||||||||||||    
T  45049060 ttactccctctgtccttaattataagacctttttga 45049025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 10220932 - 10220970
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  10220932 ttactccctccgtccctaattataagacccttttgagaa 10220970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 14428609 - 14428647
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  14428609 ttactccctccgtccctaattataagacccttttgagaa 14428647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 21756485 - 21756523
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  21756485 ttactccctccgtccctaattataagacccttttgagaa 21756523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Original strand, 46049727 - 46049761
Alignment:
Q  268 tactccctctgtccctaattataagacctttttga 302  Q
    ||||||||||||||||||||||| |||||||||||    
T  46049727 tactccctctgtccctaattataggacctttttga 46049761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Complemental strand, 46050024 - 46049986
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  46050024 ttactccctccgtccctaattataagacccttttgagaa 46049986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Complemental strand, 49127236 - 49127198
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  49127236 ttaccccctccgtccctaattataagacctttttgagaa 49127198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 7181350 - 7181387
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  7181350 tactccctccgtccctaattataagacccttttgagaa 7181387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 9499534 - 9499497
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  9499534 tactccctccgtccctaattataagacccttttgagaa 9499497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 12050429 - 12050392
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  12050429 tactccctccgtccctaattataagacccttttgagaa 12050392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 12683219 - 12683182
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  12683219 tactccctccgtccctaattataagaccattttgagaa 12683182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 22103966 - 22103929
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  22103966 tactccctccgtccctaattataagacccttttgagaa 22103929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 25149159 - 25149122
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  25149159 tactccctccgtccctaattataagacccttttgagaa 25149122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 35868120 - 35868083
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  35868120 tactccctccgtccctaattataagacccttttgagaa 35868083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 301
Target Start/End: Complemental strand, 36099261 - 36099228
Alignment:
Q  268 tactccctctgtccctaattataagacctttttg 301  Q
    |||||||||||||||||||||||||||| |||||    
T  36099261 tactccctctgtccctaattataagacccttttg 36099228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 37728713 - 37728750
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  37728713 tactccctccgtccctaattataagacccttttgagaa 37728750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 43868103 - 43868140
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  43868103 tactccctccgtccctaattataagacccttttgagaa 43868140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 44543782 - 44543819
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  44543782 tactccctccgtccctaattataagacccttttgagaa 44543819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 45252773 - 45252810
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  45252773 tactccctccgtccctaattataagacccttttgagaa 45252810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 301
Target Start/End: Original strand, 51283802 - 51283835
Alignment:
Q  268 tactccctctgtccctaattataagacctttttg 301  Q
    |||||||||||||||||||||||||||| |||||    
T  51283802 tactccctctgtccctaattataagacccttttg 51283835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 51284099 - 51284062
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  51284099 tactccctccgtccctaattataagacccttttgagaa 51284062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 53271593 - 53271630
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  53271593 tactctctctgtccttaattataagacctttttgagaa 53271630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 53361892 - 53361855
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  53361892 tactccctccgtccctaattataagaccattttgagaa 53361855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 52058982 - 52059018
Alignment:
Q  265 agttactccctctgtccctaattataagacctttttg 301  Q
    |||||||||||| |||||||||||||||||| |||||    
T  52058982 agttactccctccgtccctaattataagacccttttg 52059018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000005; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 39750418 - 39750381
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||||||||||||||||||||| |||||||||    
T  39750418 tactccctctgtccctaattataagacccttttgagaa 39750381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 36695153 - 36695118
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttga 302  Q
    ||||||||||||||||||||||||||||| ||||||    
T  36695153 ttactccctctgtccctaattataagacccttttga 36695118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 302
Target Start/End: Complemental strand, 36711254 - 36711219
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttga 302  Q
    ||||||||||||||||||||||||||||| ||||||    
T  36711254 ttactccctctgtccctaattataagacccttttga 36711219  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Complemental strand, 943675 - 943637
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  943675 ttactccctccgtccctaattataagacccttttgagaa 943637  T

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Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Complemental strand, 15811270 - 15811232
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  15811270 ttactccctccgtccctaattataagacccttttgagaa 15811232  T

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Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 30290264 - 30290302
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  30290264 ttactccctccgtccctaattataagacccttttgagaa 30290302  T

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Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Complemental strand, 39363232 - 39363194
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  39363232 ttactccctccgtccctaattataagacccttttgagaa 39363194  T

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Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 44649628 - 44649666
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  44649628 ttactccctccgtccctaattataagacccttttgagaa 44649666  T

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Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 49907020 - 49907058
Alignment:
Q  267 ttactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  49907020 ttactccctccgtccctaattataagacccttttgagaa 49907058  T

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Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 1039418 - 1039381
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  1039418 tactccctccgtccctaattataagacccttttgagaa 1039381  T

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Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 1046324 - 1046287
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  1046324 tactccctccgtccctaattataagacccttttgagaa 1046287  T

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Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 4102751 - 4102714
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  4102751 tactccctccgtccctaattataagacccttttgagaa 4102714  T

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Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 11741397 - 11741434
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  11741397 tactccctccgtccctaattataagacccttttgagaa 11741434  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 23541979 - 23542016
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  23541979 tactccctccgtccctaattataagacccttttgagaa 23542016  T

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Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 36694854 - 36694891
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  36694854 tactccctccgtccctaattataagacccttttgagaa 36694891  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 36710955 - 36710992
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  36710955 tactccctccgtccctaattataagacccttttgagaa 36710992  T

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Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 37951986 - 37951949
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  37951986 tactccctccgtccctaattataagacccttttgagaa 37951949  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 39497433 - 39497470
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  39497433 tactccctccgtccctaattataagacccttttgagaa 39497470  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 45039412 - 45039449
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  45039412 tactccctccgtccctaattataagacccttttgagaa 45039449  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 46075904 - 46075867
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  46075904 tactccctccgtccctaattataagacccttttgagaa 46075867  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 50007975 - 50008012
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||||||||||||||||||||||  |||||||||    
T  50007975 tactccctctgtccctaattataagactcttttgagaa 50008012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 52431211 - 52431174
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  52431211 tactccctccgtccctaattataagacccttttgagaa 52431174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 30289898 - 30289862
Alignment:
Q  269 actccctctgtccctaattataagacctttttgagaa 305  Q
    |||||||| |||||||||||||||||| |||||||||    
T  30289898 actccctccgtccctaattataagacccttttgagaa 30289862  T

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Target: scaffold0604 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 3819 - 3782
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  3819 tactccctccgtccctaattataagacccttttgagaa 3782  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 12065 - 12102
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  12065 tactccctccgtccctaattataagacccttttgagaa 12102  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 51719 - 51682
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  51719 tactccctccgtccctaattataagacccttttgagaa 51682  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 47640 - 47677
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  47640 tactccctccgtccctaattataagacccttttgagaa 47677  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 259159 - 259122
Alignment:
Q  268 tactccctctgtccctaattataagacctttttgagaa 305  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  259159 tactccctccgtccctaattataagacccttttgagaa 259122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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