View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9628_low_48 (Length: 227)
Name: NF9628_low_48
Description: NF9628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9628_low_48 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 15096715 - 15096944
Alignment:
| Q |
1 |
tacatcatactagttgtctgaatcaaaatcccagtagcagcaacagccaatgtaggattctccaaataaccagccaaaacagtaacaatctcataccacc |
100 |
Q |
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| T |
15096715 |
tacatcatactagttgtctgaatcaaaatcccagtagcagcaacagccaatgtaggattctccaaataaccagccaaaacagtaacaatctcataccacc |
15096814 |
T |
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| Q |
101 |
accattccaaacatatcataagacaactaggtacagccaatttcatcaactcccccaaaccttcactcacaaccatcatccctccgccaccgccg---ca |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| || |
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| T |
15096815 |
accattccaaacatatcataagacaactaggtacagccaatttcatcaactcccccaaaccttcactaaccaccatcatccctccgccaccgccgccaca |
15096914 |
T |
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| Q |
198 |
gccgggccactttaacatcatctccttctt |
227 |
Q |
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|| ||||| |||||||||||||||||||| |
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| T |
15096915 |
acccggccattttaacatcatctccttctt |
15096944 |
T |
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