View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9630_high_4 (Length: 237)
Name: NF9630_high_4
Description: NF9630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9630_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 34867076 - 34867298
Alignment:
| Q |
1 |
attttgaagagtgatgactataatgactcacaataaaaatactacaagcaaagagtcctcacggcttcaaaaatattatcacagaagtggataaacatgc |
100 |
Q |
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| T |
34867076 |
attttgaagagtgatgactataatgactcacaataaaaatactacaagcaaagagtcctcacggcttcaaaaatatcatcacagaagtggataaccatgc |
34867175 |
T |
|
| Q |
101 |
catatcttaacccataaaattcaaaatgaaaattaatggagttttgtgtaataagccacgtaaagaaagagatagaagataatctcaaagagaaaccatg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34867176 |
catatcttaacccataaaattcaaaatgaaaattaatggagttttgtgtaacaagccacgtaaagaaagagatagaagataatctcaaagagaaaccatg |
34867275 |
T |
|
| Q |
201 |
ccatatctttctcagcagctacc |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
34867276 |
ccatatctttctcagcagctacc |
34867298 |
T |
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