View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9631_low_20 (Length: 282)
Name: NF9631_low_20
Description: NF9631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9631_low_20 |
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Alignment Details
Target: chr1 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 10680649 - 10680384
Alignment:
| Q |
1 |
aatttgtctgatggttggttgcaaagtgttgcaaaataggatgtccatgaacgtgagactgcagcaccaccaatcacatattcaagaataatgtttcctg |
100 |
Q |
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| T |
10680649 |
aatttgtctgatggttggttgcaaagtgttgcaaaataggatgtccatgaacgtgagactgcagcaccaccaatcacatattcaagaataatgtttcctg |
10680550 |
T |
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| Q |
101 |
atgctatgaatgctacaaattcaccaagctcaactcttatgtaagcaaaagaaccacctataataaaagaaatgttagtcaaaggttttaccaacatttt |
200 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
10680549 |
atgctatgaatgctacaaattcaccaagttcaactcttatgtaagcaaaagaaccacctataataaaagaaatgttagtcaaaggttttgccaacatttt |
10680450 |
T |
|
| Q |
201 |
tcagttgttgctaaaagagacttgaacaaataacatacaaaaaattacgtaccagccacagggatt |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10680449 |
tcagttgttgctaaaagagacttgaacaaataacatacaaaaaattacgtaccagccacagggatt |
10680384 |
T |
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