View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9632_low_1 (Length: 585)

Name: NF9632_low_1
Description: NF9632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9632_low_1
NF9632_low_1
[»] chr5 (31 HSPs)
chr5 (137-340)||(30910735-30910939)
chr5 (139-319)||(33173901-33174080)
chr5 (141-339)||(30912084-30912280)
chr5 (169-344)||(27705231-27705406)
chr5 (140-344)||(22047729-22047934)
chr5 (169-344)||(30859086-30859262)
chr5 (132-344)||(22308715-22308926)
chr5 (169-348)||(39603879-39604059)
chr5 (139-329)||(1010296-1010484)
chr5 (155-329)||(8521267-8521439)
chr5 (140-340)||(325106-325304)
chr5 (215-329)||(15548310-15548424)
chr5 (260-344)||(1102736-1102818)
chr5 (283-344)||(11262532-11262593)
chr5 (141-255)||(22307506-22307620)
chr5 (284-329)||(1009325-1009370)
chr5 (140-318)||(8523687-8523865)
chr5 (168-267)||(39605461-39605560)
chr5 (257-344)||(10735878-10735963)
chr5 (258-344)||(4127169-4127253)
chr5 (212-329)||(324107-324224)
chr5 (169-273)||(22049122-22049226)
chr5 (257-340)||(35081357-35081438)
chr5 (142-202)||(41798004-41798064)
chr5 (138-208)||(34899002-34899072)
chr5 (141-207)||(9169584-9169650)
chr5 (279-344)||(9220373-9220441)
chr5 (299-349)||(13520710-13520760)
chr5 (138-208)||(34894144-34894214)
chr5 (155-208)||(20538065-20538118)
chr5 (284-344)||(36898897-36898957)
[»] chr2 (42 HSPs)
chr2 (139-340)||(29219381-29219583)
chr2 (139-340)||(29332680-29332882)
chr2 (137-340)||(18616924-18617128)
chr2 (141-340)||(1085307-1085504)
chr2 (169-343)||(11317284-11317458)
chr2 (169-344)||(6030385-6030560)
chr2 (141-252)||(44192453-44192564)
chr2 (137-310)||(1082982-1083153)
chr2 (137-270)||(18615510-18615643)
chr2 (141-270)||(29220865-29220994)
chr2 (141-270)||(29334164-29334293)
chr2 (139-255)||(6030601-6030717)
chr2 (169-348)||(42641772-42641950)
chr2 (141-255)||(44191134-44191248)
chr2 (141-271)||(6032301-6032432)
chr2 (142-253)||(34468957-34469068)
chr2 (156-344)||(11547672-11547860)
chr2 (160-344)||(43033099-43033281)
chr2 (141-344)||(17459251-17459455)
chr2 (169-340)||(32470496-32470665)
chr2 (169-344)||(32469174-32469350)
chr2 (168-310)||(17460635-17460775)
chr2 (156-329)||(11315946-11316117)
chr2 (139-321)||(12359618-12359799)
chr2 (169-329)||(43034401-43034561)
chr2 (155-345)||(34512826-34513013)
chr2 (279-348)||(34464103-34464172)
chr2 (279-348)||(34467641-34467710)
chr2 (279-344)||(34513469-34513534)
chr2 (169-293)||(7437727-7437851)
chr2 (282-344)||(8320895-8320957)
chr2 (286-327)||(16295150-16295191)
chr2 (169-270)||(28562798-28562899)
chr2 (141-210)||(249022-249091)
chr2 (279-344)||(4920974-4921039)
chr2 (279-344)||(28611169-28611233)
chr2 (169-207)||(7436493-7436531)
chr2 (286-348)||(30748621-30748683)
chr2 (141-207)||(35903506-35903572)
chr2 (302-344)||(35903665-35903707)
chr2 (137-203)||(37956912-37956978)
chr2 (155-207)||(37956961-37957013)
[»] chr3 (53 HSPs)
chr3 (141-340)||(10732048-10732247)
chr3 (139-345)||(35370909-35371109)
chr3 (140-340)||(53614192-53614392)
chr3 (141-340)||(41264572-41264771)
chr3 (138-310)||(26887506-26887676)
chr3 (139-345)||(27837916-27838119)
chr3 (139-310)||(41263634-41263803)
chr3 (140-344)||(26886269-26886473)
chr3 (137-340)||(10730879-10731080)
chr3 (186-348)||(27841621-27841783)
chr3 (141-271)||(53612869-53612999)
chr3 (169-344)||(38242431-38242606)
chr3 (141-340)||(35372080-35372279)
chr3 (179-344)||(3208520-3208685)
chr3 (44-139)||(41145012-41145108)
chr3 (271-348)||(34819196-34819273)
chr3 (138-253)||(42686151-42686266)
chr3 (184-310)||(53622703-53622830)
chr3 (159-326)||(12107912-12108083)
chr3 (256-348)||(14745112-14745202)
chr3 (139-329)||(3455555-3455745)
chr3 (169-253)||(18458663-18458747)
chr3 (139-345)||(40244183-40244386)
chr3 (169-348)||(53420342-53420521)
chr3 (282-348)||(10301072-10301138)
chr3 (169-271)||(18197173-18197275)
chr3 (140-340)||(38240903-38241100)
chr3 (169-344)||(42684902-42685076)
chr3 (278-348)||(10338872-10338942)
chr3 (139-253)||(50810840-50810954)
chr3 (139-253)||(50864910-50865024)
chr3 (279-344)||(48083362-48083427)
chr3 (141-232)||(3817290-3817381)
chr3 (138-253)||(50809416-50809531)
chr3 (138-253)||(50866331-50866446)
chr3 (279-348)||(49379837-49379906)
chr3 (141-232)||(3811525-3811616)
chr3 (285-326)||(11224776-11224817)
chr3 (257-328)||(7270438-7270507)
chr3 (306-346)||(28909521-28909561)
chr3 (137-253)||(37735300-37735416)
chr3 (159-251)||(37736089-37736181)
chr3 (222-344)||(36175342-36175462)
chr3 (168-207)||(36176559-36176598)
chr3 (279-344)||(13621055-13621120)
chr3 (168-340)||(34818111-34818281)
chr3 (140-273)||(53187556-53187688)
chr3 (169-236)||(18442278-18442345)
chr3 (169-236)||(19487352-19487419)
chr3 (140-329)||(53624293-53624480)
chr3 (282-320)||(28909548-28909586)
chr3 (169-254)||(40364345-40364430)
chr3 (299-343)||(24487236-24487279)
[»] chr1 (51 HSPs)
chr1 (132-338)||(15232741-15232947)
chr1 (138-310)||(49802846-49803016)
chr1 (140-340)||(16963831-16964029)
chr1 (158-340)||(16965045-16965228)
chr1 (141-340)||(15233963-15234159)
chr1 (137-344)||(49801611-49801818)
chr1 (169-343)||(45584924-45585099)
chr1 (168-348)||(15072702-15072881)
chr1 (169-343)||(35943364-35943537)
chr1 (185-344)||(44999378-44999535)
chr1 (279-348)||(13147328-13147397)
chr1 (169-307)||(50444651-50444788)
chr1 (141-273)||(52628859-52628991)
chr1 (157-268)||(46111479-46111590)
chr1 (179-329)||(48096963-48097111)
chr1 (279-348)||(9226127-9226196)
chr1 (251-319)||(34350219-34350288)
chr1 (229-340)||(46110368-46110477)
chr1 (279-334)||(15746692-15746747)
chr1 (279-340)||(3617417-3617478)
chr1 (169-344)||(16123313-16123487)
chr1 (169-312)||(27814318-27814460)
chr1 (279-348)||(48527669-48527738)
chr1 (168-344)||(46467171-46467345)
chr1 (140-317)||(14470853-14471029)
chr1 (279-340)||(52078064-52078125)
chr1 (279-319)||(41873912-41873952)
chr1 (258-344)||(10722292-10722376)
chr1 (279-334)||(18821665-18821720)
chr1 (279-344)||(6049341-6049406)
chr1 (278-343)||(9485221-9485286)
chr1 (279-344)||(14478401-14478466)
chr1 (279-344)||(26802075-26802140)
chr1 (279-344)||(51445725-51445790)
chr1 (257-344)||(12665906-12665990)
chr1 (169-253)||(50442650-50442734)
chr1 (156-252)||(51042350-51042445)
chr1 (260-329)||(9482574-9482640)
chr1 (139-254)||(24499660-24499775)
chr1 (159-340)||(34351885-34352056)
chr1 (140-207)||(42245939-42246006)
chr1 (139-343)||(46318535-46318737)
chr1 (134-208)||(52627506-52627580)
chr1 (260-344)||(5613001-5613082)
chr1 (256-344)||(10711902-10711988)
chr1 (279-319)||(23091487-23091527)
chr1 (282-344)||(13894752-13894813)
chr1 (306-344)||(27556431-27556468)
chr1 (288-326)||(28050465-28050503)
chr1 (279-349)||(41872711-41872781)
chr1 (168-242)||(44278366-44278440)
[»] chr7 (60 HSPs)
chr7 (141-349)||(22335977-22336185)
chr7 (140-340)||(13564158-13564358)
chr7 (140-340)||(11502340-11502541)
chr7 (141-340)||(32254987-32255187)
chr7 (143-309)||(11501180-11501344)
chr7 (141-271)||(22538836-22538966)
chr7 (220-344)||(40811397-40811521)
chr7 (137-344)||(22537553-22537760)
chr7 (178-344)||(43460738-43460904)
chr7 (140-340)||(22337292-22337489)
chr7 (139-309)||(13562818-13562986)
chr7 (141-335)||(40812539-40812731)
chr7 (141-319)||(3413530-3413707)
chr7 (137-317)||(41078750-41078930)
chr7 (169-340)||(47454363-47454532)
chr7 (137-272)||(24844255-24844390)
chr7 (139-329)||(41079767-41079954)
chr7 (141-254)||(3414839-3414952)
chr7 (256-344)||(35295813-35295899)
chr7 (169-340)||(43459481-43459650)
chr7 (141-254)||(40738843-40738957)
chr7 (157-335)||(47059122-47059300)
chr7 (257-344)||(2414860-2414945)
chr7 (260-348)||(43441464-43441550)
chr7 (279-348)||(46201266-46201335)
chr7 (257-344)||(669305-669389)
chr7 (141-344)||(30334558-30334755)
chr7 (169-312)||(32256344-32256485)
chr7 (152-216)||(24844393-24844457)
chr7 (159-293)||(30310137-30310270)
chr7 (261-344)||(44372848-44372929)
chr7 (261-344)||(44381704-44381785)
chr7 (169-319)||(40509675-40509824)
chr7 (168-337)||(47060400-47060566)
chr7 (169-319)||(22115105-22115254)
chr7 (144-208)||(24281075-24281139)
chr7 (137-253)||(32602927-32603043)
chr7 (140-268)||(47456366-47456494)
chr7 (157-346)||(46835689-46835878)
chr7 (156-253)||(30333298-30333395)
chr7 (279-344)||(39981452-39981517)
chr7 (279-344)||(41328354-41328419)
chr7 (157-254)||(45454052-45454149)
chr7 (157-253)||(45455378-45455474)
chr7 (169-320)||(40508404-40508554)
chr7 (169-319)||(4299989-4300138)
chr7 (279-329)||(15992270-15992320)
chr7 (279-340)||(16756006-16756067)
chr7 (137-254)||(33096863-33096980)
chr7 (279-311)||(33779036-33779068)
chr7 (139-207)||(38539667-38539735)
chr7 (160-211)||(534114-534165)
chr7 (160-211)||(537331-537382)
chr7 (138-253)||(4298708-4298823)
chr7 (139-254)||(6173455-6173570)
chr7 (139-238)||(33779105-33779204)
chr7 (169-207)||(11344533-11344571)
chr7 (169-297)||(24282939-24283065)
chr7 (306-343)||(48312202-48312238)
chr7 (155-207)||(25533200-25533252)
[»] chr4 (69 HSPs)
chr4 (140-340)||(23201843-23202043)
chr4 (137-340)||(7707582-7707786)
chr4 (140-348)||(2312392-2312601)
chr4 (138-255)||(10167420-10167537)
chr4 (141-344)||(13165494-13165695)
chr4 (139-297)||(10168745-10168903)
chr4 (169-344)||(52239903-52240078)
chr4 (138-340)||(50546901-50547102)
chr4 (140-340)||(4714016-4714216)
chr4 (137-339)||(7708710-7708912)
chr4 (139-340)||(33231385-33231585)
chr4 (141-310)||(23203904-23204071)
chr4 (139-344)||(11968507-11968712)
chr4 (169-344)||(27850853-27851022)
chr4 (169-348)||(6349460-6349643)
chr4 (228-348)||(15449986-15450106)
chr4 (169-344)||(1794437-1794613)
chr4 (141-271)||(54866619-54866748)
chr4 (137-340)||(6348149-6348350)
chr4 (140-312)||(52241105-52241274)
chr4 (171-297)||(33232662-33232785)
chr4 (169-297)||(1188869-1188996)
chr4 (159-349)||(42810114-42810303)
chr4 (144-297)||(50548188-50548334)
chr4 (147-253)||(54865109-54865214)
chr4 (260-344)||(56085465-56085547)
chr4 (251-344)||(4871602-4871694)
chr4 (141-340)||(53432060-53432258)
chr4 (169-338)||(1829779-1829947)
chr4 (169-319)||(52963595-52963743)
chr4 (169-297)||(44503642-44503768)
chr4 (138-302)||(1588045-1588210)
chr4 (279-344)||(44498596-44498661)
chr4 (168-310)||(40792776-40792914)
chr4 (169-267)||(4129019-4129117)
chr4 (156-272)||(390230-390346)
chr4 (256-343)||(19750211-19750296)
chr4 (256-343)||(19789510-19789595)
chr4 (140-255)||(1831267-1831382)
chr4 (288-343)||(7053321-7053376)
chr4 (169-329)||(393569-393728)
chr4 (279-341)||(22069370-22069432)
chr4 (279-329)||(40723362-40723412)
chr4 (229-344)||(52138709-52138825)
chr4 (145-255)||(53204363-53204473)
chr4 (155-319)||(53435694-53435857)
chr4 (138-271)||(2310918-2311051)
chr4 (260-348)||(26629909-26629994)
chr4 (159-344)||(11438484-11438668)
chr4 (263-348)||(36845531-36845614)
chr4 (168-345)||(42871120-42871295)
chr4 (279-344)||(26496225-26496290)
chr4 (283-344)||(49896500-49896561)
chr4 (169-254)||(53205488-53205573)
chr4 (288-337)||(56157419-56157468)
chr4 (169-253)||(37882860-37882944)
chr4 (169-207)||(27847704-27847742)
chr4 (168-254)||(31965860-31965946)
chr4 (306-348)||(45535207-45535248)
chr4 (284-348)||(28590816-28590880)
chr4 (285-329)||(34326868-34326912)
chr4 (215-340)||(13166689-13166813)
chr4 (139-242)||(24426335-24426438)
chr4 (169-252)||(49342645-49342728)
chr4 (279-340)||(8682768-8682829)
chr4 (306-344)||(23103925-23103962)
chr4 (260-344)||(1519929-1520010)
chr4 (179-268)||(1587218-1587307)
chr4 (279-340)||(2311088-2311149)
[»] chr8 (51 HSPs)
chr8 (140-338)||(13117554-13117752)
chr8 (138-329)||(42098558-42098749)
chr8 (138-340)||(42100027-42100227)
chr8 (139-340)||(13116326-13116525)
chr8 (169-344)||(32798447-32798622)
chr8 (140-271)||(17339537-17339668)
chr8 (169-344)||(45281104-45281278)
chr8 (140-253)||(17338038-17338151)
chr8 (179-348)||(4810505-4810670)
chr8 (139-344)||(32695189-32695395)
chr8 (140-344)||(44076277-44076482)
chr8 (169-344)||(6397809-6397982)
chr8 (214-334)||(42872116-42872234)
chr8 (138-329)||(42877614-42877803)
chr8 (260-344)||(24192579-24192661)
chr8 (169-344)||(42870839-42871015)
chr8 (256-344)||(9854795-9854882)
chr8 (142-255)||(211594-211707)
chr8 (142-255)||(240549-240662)
chr8 (142-255)||(725217-725330)
chr8 (142-255)||(793904-794017)
chr8 (279-344)||(10669361-10669426)
chr8 (140-253)||(28420180-28420293)
chr8 (169-309)||(41629734-41629872)
chr8 (260-348)||(31845707-31845792)
chr8 (256-348)||(43202210-43202300)
chr8 (261-344)||(20180590-20180671)
chr8 (137-253)||(28418800-28418916)
chr8 (169-348)||(8571528-8571707)
chr8 (179-273)||(6398483-6398577)
chr8 (278-340)||(42362671-42362732)
chr8 (245-329)||(42878761-42878845)
chr8 (169-344)||(22551033-22551206)
chr8 (157-254)||(26696546-26696643)
chr8 (141-340)||(32797136-32797336)
chr8 (291-348)||(40437508-40437565)
chr8 (155-340)||(38696320-38696504)
chr8 (184-254)||(29103528-29103598)
chr8 (279-344)||(14840815-14840880)
chr8 (260-334)||(24305160-24305232)
chr8 (169-253)||(212718-212802)
chr8 (169-253)||(239452-239536)
chr8 (169-253)||(726341-726425)
chr8 (169-253)||(792807-792891)
chr8 (169-253)||(798842-798926)
chr8 (157-207)||(8570132-8570182)
chr8 (282-340)||(17455185-17455243)
chr8 (306-344)||(37400942-37400980)
chr8 (140-273)||(45437467-45437601)
chr8 (220-340)||(30786753-30786873)
chr8 (139-207)||(38697058-38697126)
[»] chr6 (29 HSPs)
chr6 (139-348)||(5187533-5187742)
chr6 (141-340)||(17837614-17837813)
chr6 (137-340)||(23392208-23392411)
chr6 (139-340)||(29381649-29381850)
chr6 (140-340)||(23397275-23397473)
chr6 (139-271)||(17839127-17839259)
chr6 (140-344)||(18346665-18346869)
chr6 (141-340)||(29380189-29380386)
chr6 (137-271)||(5186562-5186696)
chr6 (141-253)||(6701378-6701490)
chr6 (139-317)||(32506969-32507146)
chr6 (139-254)||(2687929-2688044)
chr6 (141-271)||(6702859-6702988)
chr6 (144-297)||(29722664-29722815)
chr6 (155-255)||(2687242-2687342)
chr6 (139-231)||(12256612-12256704)
chr6 (179-345)||(12669759-12669924)
chr6 (245-344)||(7311640-7311739)
chr6 (140-317)||(6452453-6452630)
chr6 (149-206)||(12256557-12256614)
chr6 (257-348)||(11967331-11967420)
chr6 (141-271)||(232174-232303)
chr6 (279-344)||(11722921-11722986)
chr6 (140-252)||(15730036-15730149)
chr6 (140-233)||(233590-233683)
chr6 (107-140)||(24327411-24327444)
chr6 (169-250)||(34024073-34024154)
chr6 (169-261)||(6452310-6452402)
chr6 (160-253)||(27080941-27081034)
[»] scaffold0077 (2 HSPs)
scaffold0077 (137-348)||(54095-54307)
scaffold0077 (168-302)||(52617-52749)
[»] scaffold0118 (1 HSPs)
scaffold0118 (156-344)||(43489-43678)
[»] scaffold0011 (1 HSPs)
scaffold0011 (138-344)||(127428-127633)
[»] scaffold0031 (2 HSPs)
scaffold0031 (169-343)||(123995-124166)
scaffold0031 (169-344)||(125146-125323)
[»] scaffold0019 (2 HSPs)
scaffold0019 (138-253)||(61846-61961)
scaffold0019 (137-317)||(63074-63253)
[»] scaffold0472 (1 HSPs)
scaffold0472 (144-273)||(731-858)
[»] scaffold1152 (1 HSPs)
scaffold1152 (140-310)||(2426-2594)
[»] scaffold0034 (2 HSPs)
scaffold0034 (220-344)||(108590-108714)
scaffold0034 (157-340)||(109666-109847)
[»] scaffold0013 (1 HSPs)
scaffold0013 (155-327)||(32584-32753)
[»] scaffold2071 (1 HSPs)
scaffold2071 (289-344)||(597-652)
[»] scaffold0219 (1 HSPs)
scaffold0219 (257-344)||(8107-8191)
[»] scaffold0201 (1 HSPs)
scaffold0201 (279-319)||(21262-21302)
[»] scaffold0128 (1 HSPs)
scaffold0128 (261-344)||(22099-22180)


Alignment Details
Target: chr5 (Bit Score: 145; Significance: 5e-76; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 137 - 340
Target Start/End: Original strand, 30910735 - 30910939
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  ||||||||    
T  30910735 tttaggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctc 30910834  T
Q  237 cgtttgttaaataaatcccgaccgttaactttaac-ccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatattttt 335  Q
     ||||   ||||||||| |||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  30910835 tgtttaccaaataaatctcgactgttaactttaacaccaaatgatgtctttggtggaccaaccttaagagtggtccaccatagatcctattaattatttt 30910934  T
Q  336 aattt 340  Q
    |||||    
T  30910935 aattt 30910939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 139 - 319
Target Start/End: Complemental strand, 33174080 - 33173901
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||| ||||||||||||| ||||||||| |    
T  33174080 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctctg 33173981  T
Q  239 tttgttaaataaatcc-cgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccataga 319  Q
    ||||  ||||||||||  | | ||||| |||||||| ||  |||||||||||||||||||||||||||||||| ||||||||    
T  33173980 tttgccaaataaatccttggctgttaagtttaaccccaa--atgtctatggtggaccaaccttaagagtggtctaccataga 33173901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 141 - 339
Target Start/End: Complemental strand, 30912280 - 30912084
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||| ||||| |||||||    
T  30912280 ggcttattagatcgtttagtcccttatttaatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccctcacctttttctccgtt 30912181  T
Q  241 tgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatt 339  Q
    ||  ||||||||||| |  |||||||||||| | ||  || ||||||||||||||||||||| |||||| || |||||| | ||||||| || ||||||    
T  30912180 tgccaaataaatcccaagtgttaactttaactccaa--atatctatggtggaccaaccttaaaagtggtacatcatagaccttattaattttgttaatt 30912084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 169 - 344
Target Start/End: Complemental strand, 27705406 - 27705231
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| |||||||||  |||||||||||||    | |||| ||||||||  ||||||||| ||||  |||||||| | ||| |||||||||    
T  27705406 taatttcaagttttcattttggtcatacaattaataaaacgtacgttttggtccctcagattttcctccttttgccaaataaatacagacagttaacttt 27705307  T
Q  269 aacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27705306 aatccaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaatatttttaatttaaac 27705231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 140 - 344
Target Start/End: Original strand, 22047729 - 22047934
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||| ||||   |||||||||| ||||||||| ||||| ||||||||||||||||||||||||    | |||| ||||||||| |||||||||||    
T  22047729 aggcttatttgatccaatggtcccttaattaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcattttttcctccgt 22047828  T
Q  240 ttgttaaataaatcccgaccgttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 338  Q
    |||  |||||||||| | | ||||| |||||| | ||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||  |||||||    
T  22047829 ttgccaaataaatcctggctgttaagtttaactctaaatgatgtctatggtggatcaaccttaagagtggtccaccataaatcctatgaattattttaat 22047928  T
Q  339 ttaaac 344  Q
    ||||||    
T  22047929 ttaaac 22047934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 169 - 344
Target Start/End: Complemental strand, 30859262 - 30859086
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| ||||||||||||||||||||||||    | ||| |||||||||  |||||||| |||||  |||||| ||  ||||||||| |||    
T  30859262 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcacattttcctctgtttgccaaataagtcttgaccgttaagttt 30859163  T
Q  269 aaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  30859162 aaccccaaatgatgtctatggtggaccaatcttaagagtggtccaccatagatcctattaattattttaatttaaac 30859086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 132 - 344
Target Start/End: Complemental strand, 22308926 - 22308715
Alignment:
Q  132 aaaactttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttt 231  Q
    |||| ||||||||||||||||||||||||||| ||  |||||||||||||| |||||||||||| |||||||||||  ||| |||||||||||||  |||    
T  22308926 aaaaatttaggcttattagatcgtttggtcccctaaataatttcatgttttcattttggtcccataattaataaaacaggcgttttagtccctcacattt 22308827  T
Q  232 tcctccgtttgttaaataaatcc-cgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaata 330  Q
    | |||||||||  ||||||||||  |   ||||| |||||||| ||  |||||||||||||||| ||||||||||||||||||||||||   ||||||      
T  22308826 tgctccgtttgccaaataaatccatggttgttaagtttaaccccaa--atgtctatggtggacctaccttaagagtggtccaccatagacattattaaat 22308729  T
Q  331 tttttaatttaaac 344  Q
    |||||||| |||||    
T  22308728 tttttaatgtaaac 22308715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 169 - 348
Target Start/End: Original strand, 39603879 - 39604059
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| |||||| |||||||||||||||||    | |||| ||||||||  ||||||||||||||  |||||||||  ||| ||||| |||    
T  39603879 taatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttgccaaataaatcatgactgttaagttt 39603978  T
Q  269 aaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    ||||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||||||  |||||||||||||||||    
T  39603979 aaccccaaatgatgtctatggtagaccaaccttaaaagtgatccaccatagatcctattaattattttaatttaaactgtt 39604059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 139 - 329
Target Start/End: Complemental strand, 1010484 - 1010296
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||| ||| || |||||||||||| ||||||||| |||||||||||||||||| || |||||||| |    |||| ||||||||  |||  |||||    
T  1010484 taggcttaataggtcatttggtcccttaattaatttcaagtttttattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccg 1010385  T
Q  239 tttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaat 329  Q
    |  || |||||||||||||| |||||||||||||| ||  |||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  1010384 tcagtcaaataaatcccgacggttaactttaaccccaa--atgtgtatggtggaccaaccttaagagtggtccgccatagatcctattaat 1010296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 155 - 329
Target Start/End: Original strand, 8521267 - 8521439
Alignment:
Q  155 tttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc 254  Q
    |||||||||||| ||||||||| ||||| |||||||||||| || |||||||| |    |||| ||||||||  |||  ||||||  || ||||||||||    
T  8521267 tttggtcccttaattaatttcaagttttcattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgtcagtcaaataaatcc 8521366  T
Q  255 cgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaat 329  Q
    |||| |||||||||||||| ||  |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  8521367 cgacggttaactttaaccccaa--atgtgtatggtggaccaaccttaagaatggtccaccatagatcctattaat 8521439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 140 - 340
Target Start/End: Complemental strand, 325304 - 325106
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||| ||||   |||||||| |  |||||||| ||||| ||||||||||||||||||||||||    | |||| ||||||||  |||||||||||    
T  325304 aggcttatttgatctaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaagttttcctccgt 325205  T
Q  240 ttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatt 339  Q
    |||  |||||||||||||| |||||||||||| | ||  |||||||||||||||||||||||| ||||||||| | |||| | ||||||| || ||||||    
T  325204 ttgccaaataaatcccgactgttaactttaactctaa--atgtctatggtggaccaaccttaatagtggtccatcgtagaccttattaattttgttaatt 325107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 215 - 329
Target Start/End: Original strand, 15548310 - 15548424
Alignment:
Q  215 tttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccac 313  Q
    ||||||||||||| ||||||||||||||  |||||||||| | | ||||| |||||||| ||||||||||| ||||||||||||||||||| || |||||    
T  15548310 tttagtccctcat-ttttcctccgtttgccaaataaatcctgcctgttaagtttaaccctaaatgatgtctctggtggaccaaccttaagaatgatccac 15548408  T
Q  314 catagatcctattaat 329  Q
    |||| |||||||||||    
T  15548409 cataaatcctattaat 15548424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 260 - 344
Target Start/End: Original strand, 1102736 - 1102818
Alignment:
Q  260 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||| ||  ||||||||||| ||||||||||||||||||||||||||||||| |||||||  |||||||||||||    
T  1102736 gttaactttaaccccaa--atgtctatggtagaccaaccttaagagtggtccaccatagatcttattaattattttaatttaaac 1102818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 11262532 - 11262593
Alignment:
Q  283 ctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  11262532 ctatggtggaccaaccttaagagtggtccaccatagatcctattaattattataatttaaac 11262593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 255
Target Start/End: Original strand, 22307506 - 22307620
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||||||||||||||||||| ||   ||||||||||||| |||||||| ||| |||||||||||  ||  |||||||||||||  |||| ||| |||    
T  22307506 ggcttattagatcgtttggtcccctaaacaatttcatgttttcattttggttccataattaataaaacaggtgttttagtccctcactttttgctctgtt 22307605  T
Q  241 tgttaaataaatccc 255  Q
    ||  |||||||||||    
T  22307606 tgccaaataaatccc 22307620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 284 - 329
Target Start/End: Original strand, 1009325 - 1009370
Alignment:
Q  284 tatggtggaccaaccttaagagtggtccaccatagatcctattaat 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  1009325 tatggtggaccaaccttaagagtggtccaccatagatcctattaat 1009370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 318
Target Start/End: Complemental strand, 8523865 - 8523687
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||| ||| || ||||||||| || ||||||||| ||||| |||||||||||| || |||||||| |    ||||  ||| |||| |||  ||||||    
T  8523865 aggcttaataggtcatttggtcccctaattaatttcaagttttcattttggtcccataactaataaaactcatgttttgatccttcatgtttgtctccgt 8523766  T
Q  240 ttgttaaataaatcccgaccgttaactttaa---cccaaatgatgtctatggtggaccaaccttaagagtggtccaccatag 318  Q
      || |||||||||| ||| |||||||||||   ||||||  |||| ||||||||||||||||| |||||||||||||||||    
T  8523765 cagtcaaataaatcctgacagttaactttaaccccccaaa--atgt-tatggtggaccaaccttcagagtggtccaccatag 8523687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 39605560 - 39605461
Alignment:
Q  168 ttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactt 267  Q
    ||||||||| ||||| ||||||||||||||||||||||||    | |||| ||||||||  ||||||||||||||  |||||||||| ||| ||||||||    
T  39605560 ttaatttcaagttttcattttggtcccacaattaataaaacatacgttttggtccctcagattttcctccgtttgccaaataaatcctgacggttaactt 39605461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 344
Target Start/End: Original strand, 10735878 - 10735963
Alignment:
Q  257 accgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||||||| | ||  || |||||||||||||||| |||| ||  |||||||||||||| |||||||  |||||||||||||    
T  10735878 accgttaactttaactccaa--atatctatggtggaccaacgttaacagcagtccaccatagatcatattaattattttaatttaaac 10735963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 344
Target Start/End: Complemental strand, 4127253 - 4127169
Alignment:
Q  258 ccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||||| ||  ||||||||| | || ||| ||||| |||||||||||||||||||| |||||   ||||||||||||    
T  4127253 ccgttaactttaaccccaa--atgtctatgatagatcaatcttaaaagtggtccaccatagatcctgttaattaatttaatttaaac 4127169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 329
Target Start/End: Original strand, 324107 - 324224
Alignment:
Q  212 cattttagtccctcatcttttcct-ccgtttgttaaataaatcccgaccgttaacttt-aacccaaatgatgtctatggtggaccaaccttaagagtggt 309  Q
    |||||| |||| |||| ||||||| |||||| | |||||||| || || ||||||||| ||| | ||  ||||||||||||||||||| |||| ||||||    
T  324107 cattttggtccttcattttttccttccgtttctcaaataaattccaactgttaacttttaactctaa--atgtctatggtggaccaactttaatagtggt 324204  T
Q  310 ccaccatagatcctattaat 329  Q
    ||| |||||| | |||||||    
T  324205 ccatcatagaccttattaat 324224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 273
Target Start/End: Complemental strand, 22049226 - 22049122
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| |||||||||||| |||||||||||    | |||| ||||||||  |||||||| |||||  |||||||||||  | ||||| |||    
T  22049226 taatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctgtttggcaaataaatccctgctgttaagttt 22049127  T
Q  269 aaccc 273  Q
    |||||    
T  22049126 aaccc 22049122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 340
Target Start/End: Complemental strand, 35081438 - 35081357
Alignment:
Q  257 accgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    ||||||||||||||||  ||  |||||||| ||||| ||||||||||||| |||||||||| | | || |||| ||||||||||    
T  35081438 accgttaactttaacctcaa--atgtctatagtggatcaaccttaagagttgtccaccataaaccttaataatttttttaattt 35081357  T

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Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 41798064 - 41798004
Alignment:
Q  142 gcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaa 202  Q
    ||||||| ||||  ||||||||| |  |||||||| |||||||||||||||||||||||||    
T  41798064 gcttatttgatccattggtccctcaaataatttcaagtttttattttggtcccacaattaa 41798004  T

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Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 208
Target Start/End: Complemental strand, 34899072 - 34899002
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaa-tttcatgtttttattttggtcccacaattaataaaaa 208  Q
    ||||||||||||||||  ||||||||||| |||| |||||| |||| |||||||||||| || |||||||||    
T  34899072 ttaggcttattagatccattggtcccttaattaattttcat-ttttcattttggtcccataagtaataaaaa 34899002  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 9169584 - 9169650
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaa 207  Q
    |||||| ||| || ||||| |||||| ||||||||| ||||| ||||| |||||| |||||||||||    
T  9169584 ggcttaataggtcatttggccccttaattaatttcaagttttcattttagtcccataattaataaaa 9169650  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 9220441 - 9220373
Alignment:
Q  279 atgtctatggtggaccaaccttaaga---gtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||||||||||| ||||||   ||||||| ||||| ||| |||||||  |||||||||||||    
T  9220441 atgtctatggtggaccaacattaagaagagtggtcccccataaatcttattaattattttaatttaaac 9220373  T

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Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 13520760 - 13520710
Alignment:
Q  299 ttaagagtggtccaccatagatcctattaatatttttaatttaaactgttg 349  Q
    ||||||||||| |||||||||||||||||||   ||| |||||||||||||    
T  13520760 ttaagagtggttcaccatagatcctattaattaatttgatttaaactgttg 13520710  T

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Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 34894144 - 34894214
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaa 208  Q
    ||||||||||||||||  ||||||||||| ||||||||   |||| |||||||||||  || |||||||||    
T  34894144 ttaggcttattagatccattggtcccttaattaatttccatttttcattttggtcccgtaagtaataaaaa 34894214  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 20538065 - 20538118
Alignment:
Q  155 tttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaa 208  Q
    ||||||||| || |||||||||  |||| |||||||||||| ||||||||||||    
T  20538065 tttggtcccctaattaatttcaaattttcattttggtcccataattaataaaaa 20538118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 36898957 - 36898897
Alignment:
Q  284 tatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||| |||||||||| ||| ||||||||||||| || |||||  ||||| |||||||    
T  36898957 tatggtggcccaaccttaaaagtagtccaccatagattctgttaattattttagtttaaac 36898897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 8e-75; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 139 - 340
Target Start/End: Original strand, 29219381 - 29219583
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  29219381 taggcttattagatcgtttggtcctttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccg 29219480  T
Q  239 tttgttaaataaatcccgaccgttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaa 337  Q
    ||||  ||||||||||| || ||||| ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||  ||||||    
T  29219481 tttgccaaataaatcccaactgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaa 29219580  T
Q  338 ttt 340  Q
    |||    
T  29219581 ttt 29219583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 139 - 340
Target Start/End: Original strand, 29332680 - 29332882
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  29332680 taggcttattagatcgtttggtcctttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccg 29332779  T
Q  239 tttgttaaataaatcccgaccgttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaa 337  Q
    ||||  ||||||||||| || ||||| ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||  ||||||    
T  29332780 tttgccaaataaatcccaactgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaa 29332879  T
Q  338 ttt 340  Q
    |||    
T  29332880 ttt 29332882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 137 - 340
Target Start/End: Complemental strand, 18617128 - 18616924
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  18617128 tttaggcttattagatcatttggtcctttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctc 18617029  T
Q  237 cgtttgttaaataaatcccgaccgttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatattttt 335  Q
    ||||||  ||||||||||| ||  |||| ||||| |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||  ||||    
T  18617028 cgtttgccaaataaatcccaactattaagtttaaccccaaatgatgtctatggtggaccagtcttaaaagtggtccaccatagatcctattaattatttt 18616929  T
Q  336 aattt 340  Q
    |||||    
T  18616928 aattt 18616924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 141 - 340
Target Start/End: Complemental strand, 1085504 - 1085307
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| |||| |||| ||||||||  ||||||||||||    
T  1085504 ggcttattagattgtttggtcccttatttaatttcatgttttcattttggtaccacatttaataaaattggcgttttggtccctca--ttttcctccgtt 1085407  T
Q  241 tgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    ||  ||||||||| | |||||||| |||||   ||||||||| ||||||||| || | ||||||||||| |||||||||||||||||||  |||||||||    
T  1085406 tgccaaataaatcacaaccgttaagtttaataaaaatgatgtttatggtggatcatctttaagagtggtacaccatagatcctattaattattttaattt 1085307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 169 - 343
Target Start/End: Complemental strand, 11317458 - 11317284
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    ||||||||  |||| ||||||||||||||||||||||||     ||||| ||||||||  ||||||||||||||  ||||||||||  || ||||| |||    
T  11317458 taatttcaaattttcattttggtcccacaattaataaaacatatattttggtccctcaatttttcctccgtttggcaaataaatcctcacagttaagttt 11317359  T
Q  269 aacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaa 343  Q
    ||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  11317358 aactcaaatgatgtctatggtagaccaaccttaagagtggtctaccatagatcctattaattattttaatttaaa 11317284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 169 - 344
Target Start/End: Complemental strand, 6030560 - 6030385
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||| | ||||| |||||| ||||||||||||| ||||   | ||||  ||| |||| ||||||||  ||||  ||||||||| | || |||||||||    
T  6030560 taatttgaagttttcattttgatcccacaattaattaaaagtacgttttgatccttcatattttcctctatttgccaaataaatctcaacagttaacttt 6030461  T
Q  269 aacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  6030460 aacccaaatgatgtctacggtggaccaaccttaagagtgatctaccatagatcctattaatatttttaatttaaac 6030385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 141 - 252
Target Start/End: Complemental strand, 44192564 - 44192453
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  44192564 ggcttattagattgtttggtcccttatttaatttcatgttttcattttgatcccaaaattaataaaaatggcattttagtccctcacattttcctccgtt 44192465  T
Q  241 tgttaaataaat 252  Q
    ||| ||||||||    
T  44192464 tgtcaaataaat 44192453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 137 - 310
Target Start/End: Original strand, 1082982 - 1083153
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||  |||| |||| ||||||||| |||    
T  1082982 tttaggcttattatatcgtttggtcccttatttaatttcatattttcattttggtcccacatttaataaaaatggtgttttggtccgtcatctttttctc 1083081  T
Q  237 cgtttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtc 310  Q
    ||||||  || |||||||| |  |||||||||||| | ||  || ||||||||||| ||||||||| |||||||    
T  1083082 cgtttgccaattaaatcccaagtgttaactttaactctaa--atatctatggtggatcaaccttaaaagtggtc 1083153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 137 - 270
Target Start/End: Original strand, 18615510 - 18615643
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    |||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||||||||  |  ||||||||    
T  18615510 tttatgcttattagatcgtttggtcccttatttaatttcatattttcattttggtctcacaattaataaaaatggctttttagtcccctacattttcctc 18615609  T
Q  237 cgtttgttaaataaatcccgaccgttaactttaa 270  Q
    ||||||  |||||||||||||| ||||| |||||    
T  18615610 cgtttgccaaataaatcccgactgttaattttaa 18615643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 141 - 270
Target Start/End: Complemental strand, 29220994 - 29220865
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |  |||||||| |||    
T  29220994 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggctttttagtcccttacattttcctctgtt 29220895  T
Q  241 tgttaaataaatcccgaccgttaactttaa 270  Q
    ||  |||| ||||||||| ||||| |||||    
T  29220894 tgccaaattaatcccgactgttaattttaa 29220865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 141 - 270
Target Start/End: Complemental strand, 29334293 - 29334164
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |  |||||||| |||    
T  29334293 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggctttttagtcccttacattttcctctgtt 29334194  T
Q  241 tgttaaataaatcccgaccgttaactttaa 270  Q
    ||  |||| ||||||||| ||||| |||||    
T  29334193 tgccaaattaatcccgactgttaattttaa 29334164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 139 - 255
Target Start/End: Original strand, 6030601 - 6030717
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||| ||||||| ||| || ||||||||||    
T  6030601 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaattggcgttttagttccttattttttcctccg 6030700  T
Q  239 tttgttaaataaatccc 255  Q
    ||||  |||||||||||    
T  6030701 tttgccaaataaatccc 6030717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 169 - 348
Target Start/End: Complemental strand, 42641950 - 42641772
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    ||||||||  ||||||||||||||||| |||||||||||    | |||| ||||| || |||||  ||||||||  ||||||||||  ||  |||| ||     
T  42641950 taatttcaaatttttattttggtcccataattaataaaacgcaccttttggtccccca-ctttttttccgtttgccaaataaatcctcacaattaagttc 42641852  T
Q  269 aacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||  |||||||||||||||||    
T  42641851 aacccaaatgatgtctatggtgggccaaccttaagagtggtctaccatagatcctattaattattttaatttaaactgtt 42641772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 141 - 255
Target Start/End: Original strand, 44191134 - 44191248
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||| ||||  |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| ||||| | |||    
T  44191134 ggcttataagattatttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaaattgcattttagtccctcatcgtttccactgtt 44191233  T
Q  241 tgttaaataaatccc 255  Q
    ||| |||||||||||    
T  44191234 tgtcaaataaatccc 44191248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 6032432 - 6032301
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||||||||| |||||||||||||||||||  ||||||||||  || |||||||| |||    
T  6032432 ggcttattagatcgtttgatcctttattcaatttcatgtttttattttggttccacaattaataaaaatggtgttttagtcccgtattttttcctctgtt 6032333  T
Q  241 tgttaaataaatcc-cgaccgttaactttaac 271  Q
    ||  ||||||||||  ||||||||||||||||    
T  6032332 tgccaaataaatccatgaccgttaactttaac 6032301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 142 - 253
Target Start/End: Original strand, 34468957 - 34469068
Alignment:
Q  142 gcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgttt 241  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| | |||||||||||||  ||||| || ||||    
T  34468957 gcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcgcacaattaataaaaatgacgttttagtccctcacattttcttctgttt 34469056  T
Q  242 gttaaataaatc 253  Q
    |  |||||||||    
T  34469057 gccaaataaatc 34469068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 156 - 344
Target Start/End: Original strand, 11547672 - 11547860
Alignment:
Q  156 ttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatccc 255  Q
    ||||||| |||  |||||||| ||||| ||||||||| || |||||||||||      |||||  ||||||| ||||||| ||||||| ||||||||||     
T  11547672 ttggtcctttaaataatttcaagttttcattttggtctcataattaataaaacacatgttttaacccctcattttttccttcgtttgtcaaataaatcct 11547771  T
Q  256 gaccgttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||| ||||| |||||||| |||||||||||||  ||||||||||||| ||||||||||||||||||| |||||| |||| ||||||||||    
T  11547772 gactgttaagtttaaccccaaatgatgtctatcatggaccaaccttaggagtggtccaccatagatcgtattaa-atttataatttaaac 11547860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 160 - 344
Target Start/End: Original strand, 43033099 - 43033281
Alignment:
Q  160 tcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc-cgac 258  Q
    |||||||  |||||||| ||||| ||||||||||||||||||||||||    | |||| ||||||||  ||||||||||||||  |||||||||| |||     
T  43033099 tcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatcctcgat 43033198  T
Q  259 cgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
     ||||| |||||||  ||  ||||||||||| ||||||||||||||||||||||||||| | |||||||||  |||||||||||||    
T  43033199 -gttaagtttaacctcaa--atgtctatggtagaccaaccttaagagtggtccaccataaaccctattaattattttaatttaaac 43033281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 141 - 344
Target Start/End: Original strand, 17459251 - 17459455
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    |||||||| ||||  || ||||||||  |||||||| ||||| ||||||||| ||||||||||||||    | ||| |||||||||  ||||||||||||    
T  17459251 ggcttatttgatccattagtcccttaaataatttcaagttttcattttggtcacacaattaataaaacgtacgtttaagtccctcactttttcctccgtt 17459350  T
Q  241 tgttaaataaatcccgaccgttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatt 339  Q
    ||  |||||||| | |||  |||| |||||||| |||||||||||||||||||| || ||||| |||| || | ||||||||||||||||  || |||||    
T  17459351 tgccaaataaattctgacttttaagtttaaccccaaatgatgtctatggtggacgaatcttaaaagtgatctaacatagatcctattaattattataatt 17459450  T
Q  340 taaac 344  Q
    |||||    
T  17459451 taaac 17459455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 169 - 340
Target Start/End: Complemental strand, 32470665 - 32470496
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||||||||||||||||||||||||||||    | ||| ||| |||||| ||||||||||||||| |||||||||||| | ||||| |||    
T  32470665 taatttcaagtttttattttggtcccacaattaataaaacgtacgtttaagttcctcatgttttcctccgtttgtcaaataaatcccggctgttaagttt 32470566  T
Q  269 aacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    ||| | ||  ||||||||||||||  |||||||| | ||||||| | |||| | ||||||| || |||||||    
T  32470565 aactccaa--atgtctatggtggataaaccttaaaaatggtccatcgtagaccttattaattttgttaattt 32470496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 169 - 344
Target Start/End: Original strand, 32469174 - 32469350
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggca--ttttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaact 266  Q
    |||||||| ||||| |||||| |||||||||||||||||   | |  |||| |||| |||  |||||||||||| |  ||||||||||  |  ||||| |    
T  32469174 taatttcaagttttcattttgatcccacaattaataaaacgtgtaccttttggtccttcactttttcctccgtt-gccaaataaatccttatagttaagt 32469272  T
Q  267 ttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||| ||||| |||| |||||||||||||| ||||||||||||||| |||||||||||||||  |||||||||||||    
T  32469273 ttaactcaaattatgtatatggtggaccaactttaagagtggtccactatagatcctattaattattttaatttaaac 32469350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 168 - 310
Target Start/End: Complemental strand, 17460775 - 17460635
Alignment:
Q  168 ttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactt 267  Q
    ||||||||| ||||| |||||| |||||||||||||||||    | |||| ||||||||  |||||||||||||   |||||||||||||||||||||||    
T  17460775 ttaatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttcccaaataaatcccgaccgttaactt 17460676  T
Q  268 taacccaaatgatgtctatggtggaccaaccttaagagtggtc 310  Q
    ||||   ||  |||||||||||||||||| ||||| |||||||    
T  17460675 taactttaa--atgtctatggtggaccaatcttaaaagtggtc 17460635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 156 - 329
Target Start/End: Original strand, 11315946 - 11316117
Alignment:
Q  156 ttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatccc 255  Q
    |||||||| ||  |||||||| ||||| ||||||||||||||||||||||||    | ||| |||||||||  ||||||||||||||  |||||||||||    
T  11315946 ttggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtttgccaaataaatccc 11316045  T
Q  256 gaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaat 329  Q
    | | ||||| |||||  | ||  |||||||||||||| ||||||||| | ||||||||| |||| | |||||||    
T  11316046 ggctgttaagtttaattccaa--atgtctatggtggatcaaccttaaaaatggtccaccgtagaccttattaat 11316117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 12359799 - 12359618
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||||||||   | ||||||||  ||||||||||||||  |||| |||||||||||||||||| |||| |||| ||||||||| |||||||  |    
T  12359799 taggcttattagatcaccttgtcccttaaataatttcatgttttcgttttagtcccacaattaataaaattggcgttttggtccctcattttttcctttg 12359700  T
Q  239 tttgttaaataaatcccga-ccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatc 321  Q
    || |  ||||||||||  | | |||||||||||||  ||   ||||||||||||| ||| | |||||||| |||||||||||||    
T  12359699 ttcgccaaataaatccgtagctgttaactttaaccttaa--gtgtctatggtggatcaatcgtaagagtgatccaccatagatc 12359618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 169 - 329
Target Start/End: Complemental strand, 43034561 - 43034401
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| |||||  || ||||||||||||||    | |||| ||||||||  ||||||||||||||| |||||||||    | ||||| |||    
T  43034561 taatttcaagttttcattttaatctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgtcaaataaatcttcgctgttaagttt 43034462  T
Q  269 aacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaat 329  Q
    ||||      |||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  43034461 aacctctcaaatgtctatggtggatcaactttaagagtggtccaccatagatcctattaat 43034401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 345
Target Start/End: Original strand, 34512826 - 34513013
Alignment:
Q  155 tttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc 254  Q
    ||||||||| || |||||| |  ||||| |||||||||||| ||||||||||| |    ||||  |||||||  ||| |||||||| || |||||||||     
T  34512826 tttggtcccctaattaattaccagttttcattttggtcccataattaataaaactcatgttttgatccctcaaatttgcctccgttagtcaaataaatca 34512925  T
Q  255 cgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaact 345  Q
     ||| ||||| |||||||  ||||   | ||||||||| ||||| |||||||||||||||||| | | ||||||  |||||||||||||||    
T  34512926 tgactgttaagtttaaccttaatg---tatatggtggatcaaccataagagtggtccaccatataccttattaaattttttaatttaaact 34513013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 34464103 - 34464172
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    |||||||| || ||||||||||||||||||||||||||||| | |||||   ||||||||||||||||||    
T  34464103 atgtctatcgttgaccaaccttaagagtggtccaccatagaccttattagattttttaatttaaactgtt 34464172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 34467641 - 34467710
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    ||||||||| ||||| ||||||||||||||||||||||| | | ||||||  ||||||||||||||||||    
T  34467641 atgtctatgatggacaaaccttaagagtggtccaccataaaccttattaagttttttaatttaaactgtt 34467710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 34513534 - 34513469
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||| |||||| ||||||||||||||||| ||||||||||| | ||||||| ||||||||||||||    
T  34513534 atgtatatggttgaccaaccttaagagtgatccaccatagaccttattaatttttttaatttaaac 34513469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 169 - 293
Target Start/End: Complemental strand, 7437851 - 7437727
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| ||||||||||||||||||||||||     ||||| ||||||||  |||||||||||||   ||||||||||  ||  |||| |||    
T  7437851 taatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccgtttacaaaataaatcctaacaattaagttt 7437752  T
Q  269 aacccaaatgatgtctatggtggac 293  Q
    ||||||||| || |||||| |||||    
T  7437751 aacccaaataatatctatgatggac 7437727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 8320895 - 8320957
Alignment:
Q  282 tctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||| ||||||||| ||||||||||||||  |||||||  |||||||||||||    
T  8320895 tctatggtggaccatccttaagagcggtccaccatagattatattaattattttaatttaaac 8320957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 327
Target Start/End: Complemental strand, 16295191 - 16295150
Alignment:
Q  286 tggtggaccaaccttaagagtggtccaccatagatcctatta 327  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  16295191 tggtggaccaaccttaacagtggtccaccatagatcctatta 16295150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 28562899 - 28562798
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    ||||||||  |||| |||||||||||| |||||||||||    | |||| ||||||||  ||||||||||||||| |||||||||| ||| ||||| |||    
T  28562899 taatttcaaattttcattttggtcccataattaataaaacataccttttggtccctcactttttcctccgtttgtcaaataaatccagactgttaagttt 28562800  T
Q  269 aa 270  Q
    ||    
T  28562799 aa 28562798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 249022 - 249091
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatg 210  Q
    ||||||||||||| ||||||||||||  | ||||| | |||| |||||||||||| | ||||||||||||    
T  249022 ggcttattagatcatttggtcccttaagttatttcttattttcattttggtcccatatttaataaaaatg 249091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 4921039 - 4920974
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||| ||||||| |||| | |||||||||||| |||||||||||  || ||||||||||    
T  4921039 atgtctatggtagaccaactttaaaaatggtccaccataaatcctattaattattctaatttaaac 4920974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 28611233 - 28611169
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||||| || |||| | |||||||| ||||||||||||||| | ||||||||||||    
T  28611233 atgtctatggtggaccgactttaaaaatggtccactatagatcctattaat-tatttaatttaaac 28611169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 7436493 - 7436531
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaa 207  Q
    |||||||| |||||||||||||||| |||||||||||||    
T  7436493 taatttcaagtttttattttggtcctacaattaataaaa 7436531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 30748621 - 30748683
Alignment:
Q  286 tggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||  |||||||||||| ||||    
T  30748621 tggtgaacaaaccttaagagtggcacaccatagatcatattaattattttaatttaaattgtt 30748683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 35903506 - 35903572
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaa 207  Q
    |||||| ||| || |||||||| ||| ||||||||| ||||| |||||||||||| || ||||||||    
T  35903506 ggcttaataggtcatttggtcctttaattaatttcaagttttcattttggtcccataactaataaaa 35903572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 344
Target Start/End: Original strand, 35903665 - 35903707
Alignment:
Q  302 agagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  35903665 agagtggtccaccatagatcctattaaatattttaatttaaac 35903707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 37956912 - 37956978
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaat 203  Q
    |||||||||| ||| || ||||||| |||| |||||||||  ||||||||||||||||  |||||||    
T  37956912 tttaggcttaataggtcatttggtctcttaattaatttcaaatttttattttggtcccttaattaat 37956978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 37956961 - 37957013
Alignment:
Q  155 tttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaa 207  Q
    |||||||||||| |||||||||  |||| |||||||||||| || ||||||||    
T  37956961 tttggtcccttaattaatttcaaattttcattttggtcccataagtaataaaa 37957013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 7e-66; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 141 - 340
Target Start/End: Complemental strand, 10732247 - 10732048
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    |||||||||||||||||| |||||||||||||||  |||||| |||||||||||| |||||||||||||||| |||||||||||||  ||||||||||||    
T  10732247 ggcttattagatcgtttgatcccttatttaatttattgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctccgtt 10732148  T
Q  241 tgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    |   |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||  |||||||||    
T  10732147 taccaaataaattccgacggttaagtttaacccaaatgatgtctatggtggaccaacctttagagcggtccaccatagatcctattaattattttaattt 10732048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 139 - 345
Target Start/End: Original strand, 35370909 - 35371109
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||  ||||||||| ||| ||||||||| |    
T  35370909 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacaattaataaaaatggtgttttagtccttcaccttttcctctg 35371008  T
Q  239 tttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 338  Q
    ||||| |||||      ||| ||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  35371009 tttgtcaaata------gacggttaagtttagcccaaatgatgtttatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaat 35371102  T
Q  339 ttaaact 345  Q
    || ||||    
T  35371103 tttaact 35371109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 140 - 340
Target Start/End: Complemental strand, 53614392 - 53614192
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||  ||||||||  |    
T  53614392 aggcttattagatcgtttggtcccttatttaatttcttgtttttattttggtcccacaattaataaaactggcgttttagtccctcacattttcctctat 53614293  T
Q  240 ttgttaaataaatcccgaccgttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 338  Q
    |||  |||||||||| |  |||||| ||||| ||||||| |||||||||||||| || |||||||||||||||||||||||||||| ||||  |||||||    
T  53614292 ttgccaaataaatccag-gcgttaagtttaaccccaaataatgtctatggtggatcatccttaagagtggtccaccatagatcctagtaattattttaat 53614194  T
Q  339 tt 340  Q
    ||    
T  53614193 tt 53614192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 141 - 340
Target Start/End: Complemental strand, 41264771 - 41264572
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||| ||||  ||||||| ||||| |||||||    
T  41264771 ggcttattagattgtttggtcccttatttaatttcatgttttcattttggtctcacatttaataaaaatggcgttttgatccctcacctttttctccgtt 41264672  T
Q  241 tgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    ||  ||||||||| | |||||||| |||||   ||||||||| ||||||||| || | ||||||||||| |||||||||||||||||||  |||||||||    
T  41264671 tgccaaataaatctcaaccgttaagtttaataaaaatgatgtttatggtggatcatctttaagagtggtacaccatagatcctattaattattttaattt 41264572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 138 - 310
Target Start/End: Complemental strand, 26887676 - 26887506
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||     
T  26887676 ttaggcttattagatcgtttggtcccttatttaatttcatgttttcatttttgtcccacaattaataaaaatggcaatttagtccctcatcttttcctct 26887577  T
Q  238 gtttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtc 310  Q
    ||||   |||||||| | ||| ||||||||||||   ||  || ||||||||| ||||||||||| |||||||    
T  26887576 gtttcccaaataaattctgacggttaactttaacttcaa--atatctatggtgtaccaaccttaaaagtggtc 26887506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 139 - 345
Target Start/End: Original strand, 27837916 - 27838119
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  27837916 taggtttattagatcgtttgatcccttatttaatttcatgttttcattttggtcccacaattaataaatatggcgttttagtccctcaccttttcctccg 27838015  T
Q  239 tttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 338  Q
    ||||  |||||||||| ||| |||||||| |   |||   ||||||||||| ||||||  |||| ||||||||| | |||| | ||||||| || |||||    
T  27838016 tttgccaaataaatcctgactgttaacttaacttcaa---atgtctatggtagaccaattttaaaagtggtccatcgtagaccttattaattttgttaat 27838112  T
Q  339 ttaaact 345  Q
    || ||||    
T  27838113 tttaact 27838119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 139 - 310
Target Start/End: Original strand, 41263634 - 41263803
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||| ||||||||||||||| |||| ||||||||| |||||    
T  41263634 taggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacatttattaaaaatggcattttggtccgtcatctttttctccg 41263733  T
Q  239 tttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtc 310  Q
    ||||| || |||||||| |  |||||||||||| | ||  || ||||||||||| ||||||||| |||||||    
T  41263734 tttgtcaattaaatcccaagtgttaactttaactctaa--atatctatggtggatcaaccttaaaagtggtc 41263803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 140 - 344
Target Start/End: Original strand, 26886269 - 26886473
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||||||| |||||||||||||||||||||||| |||| |||||||||  |||||||||||||||||  ||||  |||||||  |||  ||| ||    
T  26886269 aggcttattagattgtttggtcccttatttaatttcatattttcattttggtctaacaattaataaaaatggtgttttgatccctcacgtttgtctctgt 26886368  T
Q  240 ttgttaaataaatcccgaccgttaactttaacc-caaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 338  Q
    |||  |||||||| ||||| ||||| || |||| |||||||||| || |||| |||||||||||||||||||||||||| |||||||||||  |||||||    
T  26886369 ttgccaaataaat-ccgactgttaatttcaacctcaaatgatgtttacggtgaaccaaccttaagagtggtccaccataaatcctattaattattttaat 26886467  T
Q  339 ttaaac 344  Q
    ||||||    
T  26886468 ttaaac 26886473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 137 - 340
Target Start/End: Original strand, 10730879 - 10731080
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    |||||||||||| ||||||||| ||||||||| |||||| |||||| |||||||||||| ||||||||||||||||||||| |||| |||  |||| |||    
T  10730879 tttaggcttattggatcgtttgatcccttattcaatttcttgttttcattttggtcccataattaataaaaatggcattttggtccttcacttttttctc 10730978  T
Q  237 cgtttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatattttta 336  Q
    ||||||  |||||||||||||| ||||||||||||   ||  |||||||||||| ||||||||||| ||||||| | |||| | | ||||||| || |||    
T  10730979 cgtttgccaaataaatcccgactgttaactttaacttcaa--atgtctatggtgaaccaaccttaaaagtggtctatcatataccttattaattttgtta 10731076  T
Q  337 attt 340  Q
    ||||    
T  10731077 attt 10731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 186 - 348
Target Start/End: Complemental strand, 27841783 - 27841621
Alignment:
Q  186 tttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactttaacccaaatgatgtcta 285  Q
    |||||||||||||||||||||||| || ||||||||| ||| |||||| | ||||||| |||||||| ||||  ||||| ||||| | |||| |||| ||    
T  27841783 tttggtcccacaattaataaaaatagctttttagtccttcaccttttctttcgtttgtcaaataaattccgatggttaagtttaatctaaattatgttta 27841684  T
Q  286 tggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    ||||||||||||||||||||||||||||||||||||||| ||||  ||||||||| |||||||    
T  27841683 tggtggaccaaccttaagagtggtccaccatagatcctaataattattttaattttaactgtt 27841621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 53612869 - 53612999
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||||||| |||||  |||||||||||||||| |||||| |||||||||||| |||||||||||||||| ||||| |||||||  |||||||| |||    
T  53612869 ggcttattagaacgtttaatcccttatttaatttcttgttttcattttggtcccataattaataaaaatggcgttttattccctcacattttcctctgtt 53612968  T
Q  241 tgttaaataaatcccgaccgttaactttaac 271  Q
    ||  |||||||||||||||||||||||||||    
T  53612969 tgccaaataaatcccgaccgttaactttaac 53612999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 169 - 344
Target Start/End: Complemental strand, 38242606 - 38242431
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| |||||| |||||||||||||||||    | |||| ||||||||  ||||  || |||||  ||||||||||  || ||||| |||    
T  38242606 taatttcaagttttcattttgatcccacaattaataaaacgtaccttttggtccctcacttttttatctgtttgccaaataaatcctcacagttaagttt 38242507  T
Q  269 aacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||  |||||||||||||    
T  38242506 aactcaaatgatgtctatggtggaccaaccttaagagtggtccaccataaattctattaattattttaatttaaac 38242431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 141 - 340
Target Start/End: Complemental strand, 35372279 - 35372080
Alignment:
Q  141 ggcttattagatcgtttggtccc---ttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc 237  Q
    |||||||||||||||||||||||   || |||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||| |||||||||     
T  35372279 ggcttattagatcgtttggtccccccttttttaatttcatgttttcattttggtctcacaattaataaaaatggcgttttagtccctcaccttttcctct 35372180  T
Q  238 gtttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaa 337  Q
    |||||  ||||||||||  || |||||||| |   |||   ||||||||| ||||||||  |||| ||||||||| | |||| | ||||||| || ||||    
T  35372179 gtttgccaaataaatccttactgttaacttaacttcaa---atgtctatgttggaccaattttaaaagtggtccatcgtagaccttattaattttgttaa 35372083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 179 - 344
Target Start/End: Original strand, 3208520 - 3208685
Alignment:
Q  179 tttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactttaaccc-aaat 277  Q
    |||| |||||||||||| |||||||||||    | ||||  ||||| || ||||||||||||||| ||||||||||  |||||||| |||||||| ||||    
T  3208520 ttttcattttggtcccataattaataaaacgtacgttttgatcccttattttttcctccgtttgtcaaataaatccttaccgttaagtttaaccccaaat 3208619  T
Q  278 gatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||| | |||||||||||||||||||||||||||||||||| |||||||||||  || ||||||||||    
T  3208620 gatat-tatggtggaccaaccttaagagtggtccaccataaatcctattaattattataatttaaac 3208685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 41145012 - 41145108
Alignment:
Q  44 ggtaaatcatgaggccaaatt-agataagaaatcccggacaactgaagttttcactttacttgaccgaaccaaattccaaagtttccttaaaacttt 139  Q
    |||||||||||| |||||||| ||||||| |||||| |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  41145012 ggtaaatcatgaagccaaatttagataagtaatcccagacaactgaagttttccctttacctgaccgaaacaaattccaaagtttccttaaaacttt 41145108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 34819273 - 34819196
Alignment:
Q  271 cccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |  |||||||||||||||||    
T  34819273 cccaaatgatgtctatagtggatcaaccttaagagtggtccaccatagatcctattacttattttaatttaaactgtt 34819196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 138 - 253
Target Start/End: Complemental strand, 42686266 - 42686151
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc 237  Q
    |||||||||||||||| |||| |||||||  |||||  |||||||||||||| ||| |||||||||||||  |||||||||||||||||  |||| |||     
T  42686266 ttaggcttattagatcatttgatcccttaaataattctatgtttttattttgatcctacaattaataaaacaggcattttagtccctcacttttttctct 42686167  T
Q  238 gtttgttaaataaatc 253  Q
    |||||| |||||||||    
T  42686166 gtttgtcaaataaatc 42686151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 53622703 - 53622830
Alignment:
Q  184 attttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactttaaccc-aaatgatgt 282  Q
    ||||||||| |||||||||||||||    |||||  ||||| |  ||||||||||||||  || |||||||| || ||||| |||||||| |||||||||    
T  53622703 attttggtcgcacaattaataaaaaatatattttgatcccttagattttcctccgtttgccaactaaatcccaacggttaagtttaaccccaaatgatgt 53622802  T
Q  283 ctatggtggaccaaccttaagagtggtc 310  Q
    ||||||||||||||||||||||||||||    
T  53622803 ctatggtggaccaaccttaagagtggtc 53622830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 159 - 326
Target Start/End: Complemental strand, 12108083 - 12107912
Alignment:
Q  159 gtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataa---atccc 255  Q
    ||||||||  |||||||| ||||| ||||||||||||||| ||||||||     ||||| ||||||||  ||||||||||||||  ||||||   ||| |    
T  12108083 gtcccttaaataatttcaagttttcattttggtcccacaactaataaaacatatattttggtccctcactttttcctccgtttgccaaataataaatcac 12107984  T
Q  256 gaccgttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctatt 326  Q
    |   ||||| |||||||| ||||||| | ||||||||||||||||||| |||||||||||||||| ||||||    
T  12107983 gggtgttaaatttaaccccaaatgatatttatggtggaccaaccttaaaagtggtccaccatagaccctatt 12107912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 14745202 - 14745112
Alignment:
Q  256 gaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    |||||| ||||||||||| ||  || ||| |||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||    
T  14745202 gaccgtcaactttaaccccaa--atatctgtggtggaccaaccttaagagtggttcaccatagatcctattaattattttaatttaaactgtt 14745112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 139 - 329
Target Start/End: Complemental strand, 3455745 - 3455555
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||| ||| || |||||||||  | ||||||||| ||||| ||||||||| || || |||||||| |    |||| |||| |||| |||  |||||    
T  3455745 taggcttaataggtcatttggtccccgaattaatttcaagttttcattttggtctcataactaataaaactcatgttttggtccttcatgtttgtctccg 3455646  T
Q  239 tttgttaaataaatcccgaccgttaactttaaccc---aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaat 329  Q
    |  || |||||||||| ||| ||||||||||||||   |||  |||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  3455645 tcagtcaaataaatcctgacagttaactttaaccccccaaa--atgt-tatggtggaccaaccttaagagtggtccaccatagatcatattaat 3455555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 18458747 - 18458663
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatc 253  Q
    |||||||| |||||||||||||||||||||||||||||| | || |||||||||||||  ||||||||||||||  |||||||||    
T  18458747 taatttcaagtttttattttggtcccacaattaataaaacttgcgttttagtccctcactttttcctccgtttgccaaataaatc 18458663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 139 - 345
Target Start/End: Original strand, 40244183 - 40244386
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||| ||||  |||||||||||  |||||||| ||||| ||||||||| ||||||||||||||    |||||| ||||||||  ||||||||||    
T  40244183 taggcttatttgatccattggtcccttaaataatttcaagttttcattttggtctcacaattaataaaacgtacattttggtccctcaaattttcctccg 40244282  T
Q  239 tttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 338  Q
    ||||  |||| |||   ||| ||||||||||||   ||   ||||||||||||||||| ||||| ||||||||| | |||| | ||||||| || |||||    
T  40244283 tttgccaaat-aattttgacagttaactttaacttcaa--gtgtctatggtggaccaaacttaaaagtggtccatcgtagaccttattaattttgttaat 40244379  T
Q  339 ttaaact 345  Q
    || ||||    
T  40244380 tttaact 40244386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 169 - 348
Target Start/End: Original strand, 53420342 - 53420521
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccga--ccgttaact 266  Q
    ||||||||| |||| |||||||||| |||||||||||||    | |||| ||||||||  |||| |||||||| | ||||||||||| |  |  |||| |    
T  53420342 taatttcatattttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttttctccgtttatcaaataaatccctagtctattaagt 53420441  T
Q  267 ttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    ||||||  ||  ||||||||||||||||||| |||| |||| ||||||||||| | ||||||  ||||||||||||||||||    
T  53420442 ttaaccacaa--atgtctatggtggaccaactttaaaagtgatccaccatagaccttattaaactttttaatttaaactgtt 53420521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 282 - 348
Target Start/End: Original strand, 10301072 - 10301138
Alignment:
Q  282 tctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||  |||||||||||||||||    
T  10301072 tctatggtgaaccaaccttaagagtgatccaccatagatcctattaattattttaatttaaactgtt 10301138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 169 - 271
Target Start/End: Original strand, 18197173 - 18197275
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    ||||||||  |||| ||||||||||||||||||||||||    | |||| ||||||||| ||||||||||||||  |||||||||| |||||||||||||    
T  18197173 taatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtttgccaaataaatccagaccgttaacttt 18197272  T
Q  269 aac 271  Q
    |||    
T  18197273 aac 18197275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 140 - 340
Target Start/End: Original strand, 38240903 - 38241100
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||| ||||  ||||||||||   ||||||||  |||||||||||||||||||||||||||||    | ||| ||||| |||  |||||||||||    
T  38240903 aggcttatttgatccattggtcccttgaataatttcaaatttttattttggtcccacaattaataaaacgtacgtttaagtccttcagattttcctccgt 38241002  T
Q  240 ttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatt 339  Q
    |||  |||||||||||| | ||||| |||||| | ||  |||||||||||| ||||| ||||| | ||||||| | |||| | ||||||| || ||||||    
T  38241003 ttgccaaataaatcccggctgttaagtttaactccaa--atgtctatggtgaaccaa-cttaaaaatggtccatcgtagagcttattaattttgttaatt 38241099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 344
Target Start/End: Original strand, 42684902 - 42685076
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatccc-gaccgttaactt 267  Q
    |||||| | ||||| |||||||| ||| ||| ||||||| || | |||||||||||||| |||| ||  ||||   ||||||||||  ||| ||||| ||    
T  42684902 taattttaagttttcattttggttccataatgaataaaactgacgttttagtccctcatttttttctatgtttaccaaataaatccttgactgttaagtt 42685001  T
Q  268 taacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||| ||  |||||||||||| ||||| |||||||||||||||||||| | | ||||||  ||||||||||||||    
T  42685002 taaccccaa--atgtctatggtgaaccaagcttaagagtggtccaccataaaccttattaaattttttaatttaaac 42685076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 10338872 - 10338942
Alignment:
Q  278 gatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    |||||||||  || ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||    
T  10338872 gatgtctataatgaaccaaccttaagagtggtccaccatagatcctattaattattttaattttaactgtt 10338942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 253
Target Start/End: Complemental strand, 50810954 - 50810840
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||| ||||||  |||||||||||  ||||||||  |||| |||||||||||| |||||||||||    | |||||||||||||| ||||||||||    
T  50810954 taggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccg 50810855  T
Q  239 tttgttaaataaatc 253  Q
    ||||  |||||||||    
T  50810854 tttgccaaataaatc 50810840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 253
Target Start/End: Original strand, 50864910 - 50865024
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||| ||||||  |||||||||||  ||||||||  |||| |||||||||||| |||||||||||    | |||||||||||||| ||||||||||    
T  50864910 taggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccg 50865009  T
Q  239 tttgttaaataaatc 253  Q
    ||||  |||||||||    
T  50865010 tttgccaaataaatc 50865024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 48083362 - 48083427
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||| || |||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  48083362 atgtctatggtgcactaaccttaagagtggtctaccatagatcctattaattattttaatttaaac 48083427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 3817381 - 3817290
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatctttt 232  Q
    ||||||||||||||||||||||| ||  |||||||||||||| |||||||||||| | ||||||||| || |   ||||||||||| |||||    
T  3817381 ggcttattagatcgtttggtcccctaactaatttcatgttttcattttggtcccatatttaataaaagtgtcgaattagtccctcaactttt 3817290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 138 - 253
Target Start/End: Original strand, 50809416 - 50809531
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc 237  Q
    ||||||||| ||||||  |||||||||||  ||||||||  |||| |||||||||||| |||||||||||    | |||||||||||||  |||||||||    
T  50809416 ttaggcttaatagatctattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctcc 50809515  T
Q  238 gtttgttaaataaatc 253  Q
    |||||  |||||||||    
T  50809516 gtttgccaaataaatc 50809531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 138 - 253
Target Start/End: Complemental strand, 50866446 - 50866331
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc 237  Q
    ||||||||| ||||||  |||||||||||  ||||||||  |||| |||||||||||| |||||||||||    | |||||||||||||  |||||||||    
T  50866446 ttaggcttaatagatctattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctcc 50866347  T
Q  238 gtttgttaaataaatc 253  Q
    |||||  |||||||||    
T  50866346 gtttgccaaataaatc 50866331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 49379837 - 49379906
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    |||||||||||||||| || |||| | ||||||||||||||||||||||||  || ||||||||||||||    
T  49379837 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaactgtt 49379906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 3811525 - 3811616
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatctttt 232  Q
    |||||||||||||||||||| || ||  |||||||||||||| |||||||||||| | ||||||||| || |   ||||||||||| |||||    
T  3811525 ggcttattagatcgtttggtaccctaactaatttcatgttttcattttggtcccatatttaataaaagtgtcgaattagtccctcaactttt 3811616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 326
Target Start/End: Complemental strand, 11224817 - 11224776
Alignment:
Q  285 atggtggaccaaccttaagagtggtccaccatagatcctatt 326  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  11224817 atggtggaccaaccttaagagtggtccaccatagatcatatt 11224776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 7270438 - 7270507
Alignment:
Q  257 accgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaa 328  Q
    ||||||||||||||||  ||  |||||| | ||||||||||||||||||||||| |||||||||| ||||||    
T  7270438 accgttaactttaacctcaa--atgtctgtagtggaccaaccttaagagtggtctaccatagatcttattaa 7270507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 28909561 - 28909521
Alignment:
Q  306 tggtccaccatagatcctattaatatttttaatttaaactg 346  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  28909561 tggtccaccatagatcctattaatttttttaatttaaactg 28909521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 253
Target Start/End: Original strand, 37735300 - 37735416
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    |||||||||||| ||||  ||||||| |||  |||||| | ||||| |||||||||||| |||||||||||      |||||||||||||| |||| ||     
T  37735300 tttaggcttatttgatccattggtcctttaaataattttaagttttcattttggtcccataattaataaaacgtatgttttagtccctcatttttttctt 37735399  T
Q  237 cgtttgttaaataaatc 253  Q
    ||||||| |||||||||    
T  37735400 cgtttgtcaaataaatc 37735416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 37736181 - 37736089
Alignment:
Q  159 gtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaa 251  Q
    ||||||||  |||||||||||||| ||||||||| ||||||||||||||    | |||||||||||||  |||| |||||||||  |||||||    
T  37736181 gtcccttaaataatttcatgttttcattttggtctcacaattaataaaacgtacgttttagtccctcacttttttctccgtttgccaaataaa 37736089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 36175342 - 36175462
Alignment:
Q  222 cctcatcttttcctccgtttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatc 321  Q
    |||||| |||| |||||||||  |||||||||| ||| ||||| |||||||| ||  ||||||||| |||| |||| |||    | |||||||||| |||    
T  36175342 cctcatttttttctccgtttgccaaataaatccggactgttaagtttaaccccaa--atgtctatgatggatcaacattatatatagtccaccatatatc 36175439  T
Q  322 ctattaatatttttaatttaaac 344  Q
    |||||||| | ||||||||||||    
T  36175440 ctattaatttctttaatttaaac 36175462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 36176598 - 36176559
Alignment:
Q  168 ttaatttcatgtttttattttggtcccacaattaataaaa 207  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  36176598 ttaatttcatgttttcattttggtcccacaattaataaaa 36176559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 13621055 - 13621120
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||||| || | || | ||||||||||||||||||||||||  || ||||||||||    
T  13621055 atgtctatggtggaccgacttaaaaaatggtccaccatagatcctattaattattctaatttaaac 13621120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 168 - 340
Target Start/End: Original strand, 34818111 - 34818281
Alignment:
Q  168 ttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactt 267  Q
    ||||||||| ||||| ||||||||||||||||||||||||       ||| ||||||||  ||||||||| ||||  ||||||||||| |  ||||||||    
T  34818111 ttaatttcaagttttcattttggtcccacaattaataaaacgtatgatttggtccctcagattttcctccatttgccaaataaatcccaatagttaactt 34818210  T
Q  268 taacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    ||||   ||  ||||||||||| || ||||||||| | || || | |||||| | ||||||| || |||||||    
T  34818211 taactttaa--atgtctatggttgatcaaccttaaaaatgatctatcatagaccttattaattttgttaattt 34818281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 53187556 - 53187688
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||| |||||  ||||||| ||  |||||||| ||||| |||||| ||  ||||||||||||| ||    ||| ||||||||  ||||| |||||    
T  53187556 aggcttatttgatcgaatggtcccctaaataatttcaagttttcattttgatcttacaattaataaaa-tgtatgtttggtccctcactttttcttccgt 53187654  T
Q  240 ttgttaaataaatcccgaccgttaactttaaccc 273  Q
    |||  ||||||||||| |||||||| ||||||||    
T  53187655 ttgccaaataaatccctaccgttaagtttaaccc 53187688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 18442278 - 18442345
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    |||||||| ||||| ||||||||||||||||||||||||    | ||||||||| |||| ||||||||    
T  18442278 taatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcattttttcctc 18442345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 19487352 - 19487419
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    |||||||| ||||| ||||||||||||||||||||||||    | ||||||||| |||| ||||||||    
T  19487352 taatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcattttttcctc 19487419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 329
Target Start/End: Complemental strand, 53624480 - 53624293
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||| ||||   |||||||| |  |||||||| ||||| |||||| || ||||||||||||||    |||||| ||| ||||  |||| ||| ||    
T  53624480 aggcttatttgatccaatggtccctcaaataatttcaagttttcattttgatctcacaattaataaaacgtacattttggtcactcacttttttctcggt 53624381  T
Q  240 ttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaacctta-agagtggtccaccatagatcctattaat 329  Q
    |||  |||||||||| ||| ||||  |||||||| ||  |||| |||||||||||||| ||| ||| | |||||||||||| | |||||||    
T  53624380 ttgccaaataaatccagacggttaggtttaaccccaa--atgtatatggtggaccaacattataga-tagtccaccatagaccttattaat 53624293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 320
Target Start/End: Original strand, 28909548 - 28909586
Alignment:
Q  282 tctatggtggaccaaccttaagagtggtccaccatagat 320  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  28909548 tctatggtggaccaaccttaagagtggttcaccacagat 28909586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 40364345 - 40364430
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc 254  Q
    |||||||| ||||| |||||||||| | |||||||||||    | ||| |||||||||| |||| |||||||||  ||||||||||    
T  40364345 taatttcaagttttcattttggtcctaaaattaataaaatgtacgtttaagtccctcatttttttctccgtttgccaaataaatcc 40364430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 299 - 343
Target Start/End: Complemental strand, 24487279 - 24487236
Alignment:
Q  299 ttaagagtggtccaccatagatcctattaatatttttaatttaaa 343  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||    
T  24487279 ttaagattggtcaaccatagatcctattaat-tttttaatttaaa 24487236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 3e-65; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 132 - 338
Target Start/End: Original strand, 15232741 - 15232947
Alignment:
Q  132 aaaactttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttt 231  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||  |||    
T  15232741 aaaaatttaggcttattagatcatttggtcccttatttaatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattt 15232840  T
Q  232 tcctccgtttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatat 331  Q
    ||||| |||||  |||||||||  ||||||||| ||||||||||||||||| ||| |||||||||| |||| ||||||||| ||||||||||||||||      
T  15232841 tcctctgtttgccaaataaatcatgaccgttaagtttaacccaaatgatgtatatagtggaccaactttaaaagtggtccatcatagatcctattaatta 15232940  T
Q  332 ttttaat 338  Q
    |||||||    
T  15232941 ttttaat 15232947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 138 - 310
Target Start/End: Complemental strand, 49803016 - 49802846
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc 237  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  49803016 ttaggcttgttagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccctcatctttttctcc 49802917  T
Q  238 gtttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtc 310  Q
    |||||  |||||||||||||| |||||||| ||| | ||  |||||||||||| ||||||||||| |||||||    
T  49802916 gtttgccaaataaatcccgacggttaacttcaactctaa--atgtctatggtgtaccaaccttaaaagtggtc 49802846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 140 - 340
Target Start/End: Original strand, 16963831 - 16964029
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  16963831 aggcttattagatcgtttggtcttttaattaatttcatgttttcattttggtcccacaattaataaaaatggtgttttagtccctcatcttttcctccgt 16963930  T
Q  240 ttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatt 339  Q
    |||  |||||||| | ||| |||||||||||| | ||  |||| |||| |||||||||||||| ||||||||| |||||| | ||||||| || ||||||    
T  16963931 ttgccaaataaatgctgactgttaactttaactctaa--atgtttatgatggaccaaccttaaaagtggtccatcatagaccttattaattttgttaatt 16964028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 16965228 - 16965045
Alignment:
Q  158 ggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccga 257  Q
    |||||||||||||||||| | |||| ||||||||||||||||||||||||||| | ||||||||||| |  ||||| ||||||| | |||||||| ||||    
T  16965228 ggtcccttatttaatttcttattttcattttggtcccacaattaataaaaatgacgttttagtcccttacattttcttccgtttatcaaataaattccga 16965129  T
Q  258 ccgttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
      ||||| ||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||  |||||||||    
T  16965128 tggttaagtttaaccccaaatgatgtatatggtggaccaactttaagagtggtccaccatagatcctattaattattttaattt 16965045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 141 - 340
Target Start/End: Complemental strand, 15234159 - 15233963
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  15234159 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtt 15234060  T
Q  241 tgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    ||  |||||||||||||| ||| ||||||||   ||  ||||||||  | |||||| ||| ||||||||||| | |||| ||||||| | || |||||||    
T  15234059 tgccaaataaatcccgactgtt-actttaacttcaa--atgtctataatagaccaatcttcagagtggtccatcgtagaccctattacttttgttaattt 15233963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 137 - 344
Target Start/End: Original strand, 49801611 - 49801818
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    ||||||||||||||||| |||||||||||||||||||| || |||| ||||||||||||||||||||||||||||  ||||  |||||||  |||  |||    
T  49801611 tttaggcttattagatcatttggtcccttatttaattttatattttcattttggtcccacaattaataaaaatggtgttttgatccctcacgtttgtctc 49801710  T
Q  237 cgtttgttaaataaatcccgaccgttaactttaacc-caaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatattttt 335  Q
     |||||  |||||||| ||||| ||||| ||||||| |||||||||| || |||  ||||||||||| |||||||||||||| || ||||||||  ||||    
T  49801711 tgtttgccaaataaat-ccgactgttaattttaacctcaaatgatgtttacggtaaaccaaccttaaaagtggtccaccataaattctattaattatttt 49801809  T
Q  336 aatttaaac 344  Q
    |||||||||    
T  49801810 aatttaaac 49801818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 169 - 343
Target Start/End: Complemental strand, 45585099 - 45584924
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| ||||||||| ||||||||||||||    | |||| |||| |||  ||||||||||||||  |||||||||| ||||||||| |||    
T  45585099 taatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccttcactttttcctccgtttgccaaataaatcctgaccgttaagttt 45585000  T
Q  269 aa-cccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaa 343  Q
    || ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||  ||||||| ||||    
T  45584999 aaacccaaatgatgtctatggtggcccaactttaagagtgctccaccatagatcctattaattattttaatataaa 45584924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 168 - 348
Target Start/End: Complemental strand, 15072881 - 15072702
Alignment:
Q  168 ttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatccc-gaccgttaact 266  Q
    ||||||||| ||||| ||||||||||||||||||||||||    |||||| |||||| || ||||||||||||||  ||||||||||  | | |||||||    
T  15072881 ttaatttcaagttttcattttggtcccacaattaataaaacgtacattttggtcccttattttttcctccgtttgccaaataaatccatgtctgttaact 15072782  T
Q  267 ttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    ||||||  ||  ||||||||||||||||||||| |||||||||||||| ||||  |||||||| || |||||||||| ||||    
T  15072781 ttaacctcaa--atgtctatggtggaccaacctaaagagtggtccaccgtagactctattaattttcttaatttaaattgtt 15072702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 169 - 343
Target Start/End: Complemental strand, 35943537 - 35943364
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatccc--gaccgttaact 266  Q
    ||||||||  |||||||||||||||||||||||||||||    |||||| |||| |||  ||||||| ||||||  |||||||||||  | | ||||| |    
T  35943537 taatttcaaatttttattttggtcccacaattaataaaacgtacattttggtcc-tcactttttccttcgtttgccaaataaatcccctggctgttaagt 35943439  T
Q  267 ttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaa 343  Q
    ||||||| ||  ||||||||||||||||||||||||||||| ||||||||||| | ||||||  |||||| ||||||    
T  35943438 ttaaccctaa--atgtctatggtggaccaaccttaagagtgatccaccatagaccttattaaattttttattttaaa 35943364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 344
Target Start/End: Complemental strand, 44999535 - 44999378
Alignment:
Q  185 ttttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgacc-gttaactttaacccaaatgatgtc 283  Q
    |||| |||||||||||||||||| |||| |||| |||| |||| |||||||| |||||  ||||||||||| | | |||||||||||||  ||  |||||    
T  44999535 ttttagtcccacaattaataaaattggcgttttcgtcc-tcattttttcctctgtttgccaaataaatccctagctgttaactttaaccttaa--atgtc 44999439  T
Q  284 tatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||||| | |||||||||| ||||||||||| |||||||  |||||| ||||||    
T  44999438 tatggtggaccaatcgtaagagtggttcaccatagatcttattaattattttaacttaaac 44999378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 13147397 - 13147328
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||| ||||    
T  13147397 atgtctatggtggaccaaccttaatagtggtccaccatagatcctattaattattttaatttaaattgtt 13147328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 169 - 307
Target Start/End: Complemental strand, 50444788 - 50444651
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    ||||||||  |||| ||||| ||||||||||||||||||    |||||| ||||||||| |||||||||| |||  ||||||||||  ||||||||||||    
T  50444788 taatttcaaattttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccgattgccaaataaatccaaaccgttaacttt 50444689  T
Q  269 aac-ccaaatgatgtctatggtggaccaaccttaagagtg 307  Q
    ||| |||||  | ||||||| |||||||||||||||||||    
T  50444688 aactccaaa--acgtctatgttggaccaaccttaagagtg 50444651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 141 - 273
Target Start/End: Complemental strand, 52628991 - 52628859
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    |||||||| ||||  | |||||||||  |||||||| ||||| ||||||||||||||||||||||||    | |||| ||||||||| ||||||||||||    
T  52628991 ggcttatttgatctatcggtcccttaaataatttcaagttttaattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtt 52628892  T
Q  241 tgttaaataaatcccgaccgttaactttaaccc 273  Q
    ||  ||||||||| | |||||||| ||||||||    
T  52628891 tgccaaataaatctcaaccgttaagtttaaccc 52628859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 157 - 268
Target Start/End: Complemental strand, 46111590 - 46111479
Alignment:
Q  157 tggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccg 256  Q
    ||||||||||  |||||||| ||||||||||||||||||||||||||||||    | |||| || |||||| ||||||| ||||||  ||||||||||||    
T  46111590 tggtcccttaaataatttcaagtttttattttggtcccacaattaataaaacgtaccttttggttcctcattttttccttcgtttgccaaataaatcccg 46111491  T
Q  257 accgttaacttt 268  Q
    || |||||||||    
T  46111490 actgttaacttt 46111479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 329
Target Start/End: Complemental strand, 48097111 - 48096963
Alignment:
Q  179 tttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactttaacccaaatg 278  Q
    ||||||||||||||||| || |||||||| |    ||||||||||| |  |||  ||||||  || ||||||||||| || ||||| |||||||  ||      
T  48097111 tttttattttggtcccataactaataaaactcatgttttagtcccttaggtttgtctccgtcggtcaaataaatccctactgttaagtttaacctcaa-- 48097014  T
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaat 329  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  48097013 atgtatatggtggaccaaccttaagagtggtctaccatagatcctattaat 48096963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 9226196 - 9226127
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||  |||||||||||| ||||    
T  9226196 atgtctatggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttaaattgtt 9226127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 34350219 - 34350288
Alignment:
Q  251 atcccgaccgttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccataga 319  Q
    ||||||| |||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  34350219 atcccgatcgttaagtttaaccccaaatgatgtctatggtggatcaaccttaagagtggtccaccataga 34350288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 229 - 340
Target Start/End: Original strand, 46110368 - 46110477
Alignment:
Q  229 ttttcctccgtttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaa 328  Q
    |||| ||||||||| |||||||||| |||| |||||||||||| | ||  || ||||||||||||||||||||||||||||||| | |||| | ||||||    
T  46110368 tttttctccgtttgctaaataaatctcgactgttaactttaactctaa--atatctatggtggaccaaccttaagagtggtccatcgtagaccttattaa 46110465  T
Q  329 tatttttaattt 340  Q
    | || |||||||    
T  46110466 ttttgttaattt 46110477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 15746747 - 15746692
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttt 334  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  15746747 atgtctatggtggaccaatcttaagagtggtccaccatagatcctattaatctttt 15746692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 3617478 - 3617417
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||  |||||||||    
T  3617478 atgtctatggtgaaccaaccttaagagtggtccactatagatcctattaattattttaattt 3617417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 169 - 344
Target Start/End: Original strand, 16123313 - 16123487
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatccc-gaccgttaactt 267  Q
    |||||| | ||||| |||||||| ||||||||||||||| |  | |||||||||||||| ||||| ||||||||  ||||||||||| |   ||||| ||    
T  16123313 taatttaaagttttcattttggttccacaattaataaaattcacgttttagtccctcattttttcttccgtttgccaaataaatccctggttgttaagtt 16123412  T
Q  268 taacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||| |  ||  ||||||||||| ||||||| |||| |||| ||||||||| | | |||||| ||||||| |||||||    
T  16123413 taatctcaa--atgtctatggtagaccaactttaaaagtgatccaccatataccttattaaaatttttagtttaaac 16123487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 169 - 312
Target Start/End: Original strand, 27814318 - 27814460
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| ||||| |||| | |||||||||||    | |||| ||||||||| |||||||| |||||  |||||||||||||| |||||||||    
T  27814318 taatttcaagttttcattttagtcctataattaataaaacgtaccttttggtccctcattttttcctctgtttgccaaataaatcccgacggttaacttt 27814417  T
Q  269 -aacccaaatgatgtctatggtggaccaaccttaagagtggtcca 312  Q
     ||| | ||  ||||||||||||||||||| |||| |||||||||    
T  27814418 taactctaa--atgtctatggtggaccaactttaaaagtggtcca 27814460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 48527669 - 48527738
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| ||| |||  |||||||||||||||||    
T  48527669 atgtctatggtcgaccaactttaagagtggtccaccatagatcttatcaattattttaatttaaactgtt 48527738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 168 - 344
Target Start/End: Original strand, 46467171 - 46467345
Alignment:
Q  168 ttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgacc-gttaact 266  Q
    ||||||||| ||||| |||||||||||| || |||||||| |    |||  ||||||||  ||| ||||||||||| |||||||||||   | ||||| |    
T  46467171 ttaatttcaagttttcattttggtcccataactaataaaactcatgtttcggtccctcaggtttgcctccgtttgtcaaataaatccctcgctgttaagt 46467270  T
Q  267 ttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||  ||  ||||||||||||||||||| |||| |||| |||||| |||||  |||||| |||||||||||||||    
T  46467271 ttaaccataa--atgtctatggtggaccaacattaaaagtgatccaccgtagatgttattaa-atttttaatttaaac 46467345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 317
Target Start/End: Original strand, 14470853 - 14471029
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||| ||||   ||||||| ||  |||||||| ||||| ||||||||||||||||||||||||    |  || |||||||||  ||||||| |||    
T  14470853 aggcttatttgatccaatggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacggttaagtccctcactttttccttcgt 14470952  T
Q  240 ttgttaaataaatcc--cgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccata 317  Q
    |||  ||||||||||  ||   ||||| |||||||| ||  | |||||| ||||||||||||||||||||||||||||||    
T  14470953 ttgccaaataaatccttcggt-gttaagtttaaccccaa--acgtctatagtggaccaaccttaagagtggtccaccata 14471029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 52078125 - 52078064
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    |||||||||||| |||||||||||||||| | |||||||||||||||||||  |||||||||    
T  52078125 atgtctatggtgaaccaaccttaagagtgatacaccatagatcctattaattattttaattt 52078064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 41873952 - 41873912
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccataga 319  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41873952 atgtctatggtggaccaaccttaagagtggtccaccataga 41873912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 344
Target Start/End: Complemental strand, 10722376 - 10722292
Alignment:
Q  258 ccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||||  ||  || |||||| ||||||||||| |||||||||||| ||||||| ||| |||| ||||||||||||||    
T  10722376 ccgttaactttaacctcaa--atatctatgatggaccaacctaaagagtggtccatcatagattctactaatttttttaatttaaac 10722292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 18821720 - 18821665
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttt 334  Q
    ||||||||||||||| |||||||||||||||| |||| ||||||||||||| ||||    
T  18821720 atgtctatggtggactaaccttaagagtggtctaccaaagatcctattaatttttt 18821665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 6049406 - 6049341
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||||||| || || ||||||||||| |||||||| |||||  |||||||||||||    
T  6049406 atgtctatggtggaccaatctaaatagtggtccaccgtagatcctgttaattattttaatttaaac 6049341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 9485286 - 9485221
Alignment:
Q  278 gatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaa 343  Q
    ||||||||||||||| |||| |||||||||||  |||||| |||||||||||  ||||||||||||    
T  9485286 gatgtctatggtggatcaactttaagagtggttaaccataaatcctattaattattttaatttaaa 9485221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 14478401 - 14478466
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||||| || |||| | ||||||||||||||||||||||||  || ||||||||||    
T  14478401 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaac 14478466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 26802075 - 26802140
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||| |||| ||||||||||||||| |||||| ||||||| |||||||  |||||||||||||    
T  26802075 atgtctaaggtgaaccaaccttaagagttgtccactatagatcatattaatcattttaatttaaac 26802140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 51445725 - 51445790
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||||||||  || ||||||||||    
T  51445725 atgtctatggtggatcaactttaaaaatggtccaccatagatcctattaattattctaatttaaac 51445790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 344
Target Start/End: Original strand, 12665906 - 12665990
Alignment:
Q  257 accgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||||||||  ||  |||| ||||||| |||| | ||||||||||||||||||||||| ||||||| || |||||||||||    
T  12665906 accgttaactttaacctcaa--atgtttatggtgaaccatc-ttaagagtggtccaccatagatcttattaattttgttaatttaaac 12665990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 50442650 - 50442734
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatc 253  Q
    |||||| ||||||||||||||||| ||||||||||||||    ||||||  | ||||| ||||||||| |||||| |||||||||    
T  50442650 taattttatgtttttattttggtctcacaattaataaaacgtacattttgattcctcaccttttcctctgtttgtcaaataaatc 50442734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 252
Target Start/End: Complemental strand, 51042445 - 51042350
Alignment:
Q  156 ttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaat 252  Q
    ||||||||||| ||||||||   |||| |||||||||||||||||||||||| |  | |||||||||||| | |||| |||||||||  ||||||||    
T  51042445 ttggtcccttaattaatttccaattttcattttggtcccacaattaataaaactcacgttttagtccctc-tttttttctccgtttgccaaataaat 51042350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 9482574 - 9482640
Alignment:
Q  260 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaat 329  Q
    |||||||||||||||||||   ||||  |||||||||| ||||||||||| ||||||||||| |||||||    
T  9482574 gttaactttaacccaaatg---tctacagtggaccaactttaagagtggttcaccatagatcttattaat 9482640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 139 - 254
Target Start/End: Complemental strand, 24499775 - 24499660
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||| |||   |||||||| ||  |||||||| ||||| ||||||||| |||||||||||||| |  | |||| ||||||||  ||||||||||    
T  24499775 taggcttatttgatttgttggtcccctaaataatttcaagttttcattttggtctcacaattaataaaactcacgttttggtccctcactttttcctccg 24499676  T
Q  239 tttgttaaataaatcc 254  Q
    |||   ||||||||||    
T  24499675 tttaccaaataaatcc 24499660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 340
Target Start/End: Complemental strand, 34352056 - 34351885
Alignment:
Q  159 gtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgac 258  Q
    ||||||||  |||||| | ||||| ||||||||||||||||||||||||    | |||| ||||||||  ||||||| ||||||| ||| |||||| ||     
T  34352056 gtcccttaaataattttaagttttcattttggtcccacaattaataaaatgtaccttttggtccctcactttttcctacgtttgtcaaa-aaatcctgat 34351958  T
Q  259 cgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
     |||||  ||||       || |||||||||||||||| |||||||||||||||||||| | | ||||||||||| ||||||    
T  34351957 ggttaaacttaa-------ga-gtctatggtggaccaa-cttaagagtggtccaccataaaccttattaatatttctaattt 34351885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 42246006 - 42245939
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaa 207  Q
    ||||||| |||||| |||  ||||||| ||||||||| |||||||||||||| ||| |||||||||||    
T  42246006 aggcttaatagatcatttaatcccttaattaatttcaagtttttattttggttccataattaataaaa 42245939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 343
Target Start/End: Complemental strand, 46318737 - 46318535
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||| ||| || |||||||| ||| ||||||||| ||||| ||||| |||||| || |||||||| |    |||| ||||||||  | |  |||||    
T  46318737 taggcttaataggtcatttggtcctttaattaatttcaagttttgatttttgtcccataactaataaaagtcatgttttggtccctcaattgtatctccg 46318638  T
Q  239 tttgttaaataaatccc-gaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaa 337  Q
    | ||| ||||||||||  | | ||||| |||||||| ||  ||||||||| ||||  | | || |||||||||||||||||||||||||||   ||||||    
T  46318637 tctgtcaaataaatccttggctgttaagtttaaccccaa--atgtctatgatggatta-cttttagagtggtccaccatagatcctattaaatattttaa 46318541  T
Q  338 tttaaa 343  Q
    ||||||    
T  46318540 tttaaa 46318535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 208
Target Start/End: Original strand, 52627506 - 52627580
Alignment:
Q  134 aactttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaa 208  Q
    ||||| ||||||||| ||||   |||||||| |  |||||||| ||||| |||||||||||||||||||||||||    
T  52627506 aacttaaggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaaa 52627580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 260 - 344
Target Start/End: Complemental strand, 5613082 - 5613001
Alignment:
Q  260 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||| ||  |||| ||||||||| || | |||| |||| |||||||||||||||||||||  |||||||||||||    
T  5613082 gttaactttaaccccaa--atgtttatggtggatcacctttaa-agtgatccaccatagatcctattaattattttaatttaaac 5613001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 10711902 - 10711988
Alignment:
Q  256 gaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||||||  ||  || |||||| | ||||||||| |||||||||||| |||| || ||| |||| ||||||||||||||    
T  10711902 gaccgttaactttaacctcaa--atatctatgatagaccaacctaaagagtggtccatcataaattctactaatttttttaatttaaac 10711988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 23091487 - 23091527
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccataga 319  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  23091487 atgtctatggtggaccaactttaaaagtggtccaccataga 23091527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 13894752 - 13894813
Alignment:
Q  282 tctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||| |||||||| |||||| ||| |||||||||||| |||||  |||||||||||||    
T  13894752 tctatggtg-accaacctaaagagttgtctaccatagatcctgttaattattttaatttaaac 13894813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 306 - 344
Target Start/End: Original strand, 27556431 - 27556468
Alignment:
Q  306 tggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  27556431 tggtccaccatagatcctattaat-tttttaatttaaac 27556468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 288 - 326
Target Start/End: Original strand, 28050465 - 28050503
Alignment:
Q  288 gtggaccaaccttaagagtggtccaccatagatcctatt 326  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  28050465 gtggaccaatcttaagagtgttccaccatagatcctatt 28050503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 349
Target Start/End: Original strand, 41872711 - 41872781
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgttg 349  Q
    |||||||||||| ||||| ||||||| | || ||||||||| | ||||||  |||||||||||||| ||||    
T  41872711 atgtctatggtgaaccaatcttaagattagttcaccatagaccttattaaattttttaatttaaaccgttg 41872781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 44278440 - 44278366
Alignment:
Q  168 ttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttg 242  Q
    ||||||||| ||||| ||||||||||||| ||||||||||    | |||| ||||||||| |||| |||||||||    
T  44278440 ttaatttcaagttttcattttggtcccacgattaataaaacgtacgttttggtccctcatttttttctccgtttg 44278366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 1e-64; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 141 - 349
Target Start/End: Original strand, 22335977 - 22336185
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||    
T  22335977 ggcttattagatcttttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctcagtt 22336076  T
Q  241 tgttaaataaatcccgaccgttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatt 339  Q
    ||  |||||||||||||  ||||| ||||| ||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||    
T  22336077 tgccaaataaatcccgaatgttaagtttaaccccaaatgatg-ctatggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatt 22336175  T
Q  340 taaactgttg 349  Q
    | ||| ||||    
T  22336176 tcaaccgttg 22336185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 140 - 340
Target Start/End: Complemental strand, 13564358 - 13564158
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    |||||||||||||| ||| ||||||||||||||||| |||||| |||||||||||||||||||||||| |||| |||||||||||||  |||||||||||    
T  13564358 aggcttattagatcatttagtcccttatttaatttcttgttttcattttggtcccacaattaataaaactggcgttttagtccctcacattttcctccgt 13564259  T
Q  240 ttgttaaataaatcccgaccgttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 338  Q
    |||  ||||||||||||| |||||| ||||| ||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||  |||||||    
T  13564258 ttgccaaataaatcccga-cgttaagtttaaccccaaataatgtctatggtggatcatccttaagagtggtccaccatagatcctattaattattttaat 13564160  T
Q  339 tt 340  Q
    ||    
T  13564159 tt 13564158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 140 - 340
Target Start/End: Complemental strand, 11502541 - 11502340
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||||||||||||||||| |||  |||||||||||||| |||||| ||||||| ||||||||||| ||   ||||||||||| ||||| ||| ||    
T  11502541 aggcttattagatcgtttggtcctttaactaatttcatgttttcattttgatcccacatttaataaaaattgcgaattagtccctcaacttttgctctgt 11502442  T
Q  240 ttgttaaataaatcccgaccgttaactttaacc-caaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 338  Q
    |||  ||||||||||| || ||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||  |||||||    
T  11502441 ttgccaaataaatcccaacagttaagtttaacctcaaatgatgtctatggtagaccaaccttaagagtggtccaccatagatcctagtaattattttaat 11502342  T
Q  339 tt 340  Q
    ||    
T  11502341 tt 11502340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 141 - 340
Target Start/End: Original strand, 32254987 - 32255187
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||||| ||| |||||||||| |  ||||||||  ||||||||||||||||| |||||||||||    ||||||  |||||||  ||||||||||||    
T  32254987 ggcttattaaatcatttggtccctcaaataatttcaaatttttattttggtcccataattaataaaacgtacattttgatccctcactttttcctccgtt 32255086  T
Q  241 tgttaaataaatcccgaccgttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatt 339  Q
    ||  |||||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  32255087 tgccaaataaatcccgacggttaagtttaaccccaaatgatgtttatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaatt 32255186  T
Q  340 t 340  Q
    |    
T  32255187 t 32255187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 143 - 309
Target Start/End: Original strand, 11501180 - 11501344
Alignment:
Q  143 cttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttg 242  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| |||||||||| ||||    
T  11501180 cttattagatcgtttggtcctttaattaatttcatgttttcattttggtcccacagttaataaaaatagcattttagtccctcaccttttcctccatttg 11501279  T
Q  243 ttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggt 309  Q
      |||||||||||||| ||||||||||||   ||  |||||||||||||||||||||||| ||||||    
T  11501280 ccaaataaatcccgactgttaactttaacttcaa--atgtctatggtggaccaaccttaaaagtggt 11501344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 22538966 - 22538836
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  22538966 ggcttattagatcgtttggtcccttatttaatttcatgttttctttttggtcccacaattaataaaaatgacgttttagtccctcatcttttcctccgtt 22538867  T
Q  241 tgttaaataaatcccgaccgttaactttaac 271  Q
    ||  ||||||||| |||| ||||||||||||    
T  22538866 tgccaaataaatctcgacggttaactttaac 22538836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 40811397 - 40811521
Alignment:
Q  220 tccctcatcttttcctccgtttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccataga 319  Q
    |||||||| ||||||||||| |  ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40811397 tccctcatattttcctccgtatactaaataaatcctgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccataga 40811496  T
Q  320 tcctattaatatttttaatttaaac 344  Q
    | |||||||||||||||||||||||    
T  40811497 ttctattaatatttttaatttaaac 40811521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 137 - 344
Target Start/End: Original strand, 22537553 - 22537760
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    |||||||||||||||||||||| ||||||||||||||| || |||| |||||||||||||||||| |||||||| ||||||  |||||||  |||  |||    
T  22537553 tttaggcttattagatcgtttgctcccttatttaattttatattttcattttggtcccacaattactaaaaatgacattttgatccctcacgtttgtctc 22537652  T
Q  237 cgtttgttaaataaatcccgaccgttaactttaacc-caaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatattttt 335  Q
     |||||  |||||||| || || ||||| ||||||| |||||||||| || |||| ||||||||||| |||| |||||||||||||||||||||  ||||    
T  22537653 tgtttgccaaataaat-ccaactgttaattttaacctcaaatgatgtttacggtgaaccaaccttaatagtgatccaccatagatcctattaattatttt 22537751  T
Q  336 aatttaaac 344  Q
    |||||||||    
T  22537752 aatttaaac 22537760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 178 - 344
Target Start/End: Complemental strand, 43460904 - 43460738
Alignment:
Q  178 gtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactttaacccaaat 277  Q
    ||||| ||||||||||||||||||||||||    |||||||||||||||  ||||||||| ||||  ||||||||||  || ||||| |||||| |||||    
T  43460904 gttttcattttggtcccacaattaataaaacgtacattttagtccctcactttttcctccatttgccaaataaatcctcacagttaagtttaactcaaat 43460805  T
Q  278 gatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||    
T  43460804 tatgtctatggtggaccaactttaagagtggtccaccatagatcctattaattattttaatttaaac 43460738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 140 - 340
Target Start/End: Complemental strand, 22337489 - 22337292
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||| || ||||||| |  |||||||||||    
T  22337489 aggcttattagattgtttggtcccttatttagtttcatgttttcattttgatcccacaattaataaaaatggca-ttcagtcccttacattttcctccgt 22337391  T
Q  240 ttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatt 339  Q
    |||  |||||||||| ||||||||| ||||||   ||  ||||||||||||||||||||||||  || || |||| |||| | ||||||| || ||||||    
T  22337390 ttgccaaataaatcctgaccgttaaatttaacttcaa--atgtctatggtggaccaaccttaaatgtagtacaccgtagaccttattaattttgttaatt 22337293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 139 - 309
Target Start/End: Original strand, 13562818 - 13562986
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||  |||| ||| |    
T  13562818 taggcttattagatcgtttagtcccttatttaatttcttgtttttattttggtcccacaagtaataaaaatggcgttttagtccctcacatttttctctg 13562917  T
Q  239 tttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggt 309  Q
    |||   |||||||||||||  ||||||||||||   ||  ||||||||  |||||||||||||| ||||||    
T  13562918 tttaccaaataaatcccgattgttaactttaacttcaa--atgtctataatggaccaaccttaaaagtggt 13562986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 141 - 335
Target Start/End: Complemental strand, 40812731 - 40812539
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||    | ||||  |||||||| |||||||| |||    
T  40812731 ggcttattagatcgtttgatcccttatttaatttcatgttttcattttggttccataattaataaaacgtacgttttgctccctcatattttcctctgtt 40812632  T
Q  241 tgttaaataaatcccgaccgttaactttaac-ccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatattttt 335  Q
    ||| ||||| |||||||| ||| |||||||| |||||| |   | |||||||||||||||||| |||| |||| | |||||| ||||||| |||||    
T  40812631 tgtcaaatatatcccgactgtttactttaactccaaataa---ccatggtggaccaaccttaaaagtgatccatcgtagatcttattaattttttt 40812539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 141 - 319
Target Start/End: Original strand, 3413530 - 3413707
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||||||||||||||||||  ||  ||||||| |||||| |||||||||| |||||||||||||||||| ||||||||||||| ||||| ||| |||    
T  3413530 ggcttattagatcgtttggtcctctaaataatttcgtgttttcattttggtcctacaattaataaaaatggcgttttagtccctcaccttttactctgtt 3413629  T
Q  241 tgttaaataaatccc-gaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccataga 319  Q
    ||  |||||||||||  || ||||| ||||||   |  ||||||||||||||| ||| ||||||||| ||||||||||||    
T  3413630 tgccaaataaatccctaactgttaagtttaacttca--gatgtctatggtggatcaatcttaagagttgtccaccataga 3413707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 137 - 317
Target Start/End: Original strand, 41078750 - 41078930
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    |||||||||||||||||   |||||||| | ||||||||   |||| ||||||||||||||||| |||||||     ||||  ||| | |  ||||||||    
T  41078750 tttaggcttattagatccgctggtccctcaattaatttccatttttcattttggtcccacaattgataaaaagtatcttttgatcctttagattttcctc 41078849  T
Q  237 cgtttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccata 317  Q
    | ||||   ||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||||    
T  41078850 catttgccgaataaatcccgacggttaactttaacccaaatgatgtatatggtggaccaatcttaaaaatggtccaccata 41078930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 169 - 340
Target Start/End: Original strand, 47454363 - 47454532
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| | ||| ||||||||||||||||||||||||    |||||| ||||||||  |||| || ||||||  ||||||||||||||  ||||||||    
T  47454363 taatttcaagctttcattttggtcccacaattaataaaacgtacattttggtccctcaagtttttcttcgtttgccaaataaatcccgactattaacttt 47454462  T
Q  269 aacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    ||| | ||  ||||||||||| |||||||||||||||||||||| | |||| | ||||||| || |||||||    
T  47454463 aactctaa--atgtctatggtagaccaaccttaagagtggtccatcgtagaccttattaattttattaattt 47454532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 137 - 272
Target Start/End: Original strand, 24844255 - 24844390
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    |||||| ||||| ||||| ||| ||||||||||||||| ||||||||||||| || | |||||||||| ||||||| |||||||||||||  ||||| ||    
T  24844255 tttaggtttattggatcgattgatcccttatttaattttatgtttttatttttgttctacaattaatacaaatggcgttttagtccctcacattttcttc 24844354  T
Q  237 cgtttgttaaataaatcccgaccgttaactttaacc 272  Q
    ||||||  ||||||||||  || ||||| |||||||    
T  24844355 cgtttgccaaataaatcctcactgttaagtttaacc 24844390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 139 - 329
Target Start/End: Complemental strand, 41079954 - 41079767
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||| |||||| |||  ||||||||| | ||||||||   ||||||||||||||||||||| |||||||    | |||| |||||| |||||||||||||    
T  41079954 taggtttattatatccattggtccctcaattaatttccattttttattttggtcccacaat-aataaaacgtacgttttggtcccttatcttttcctccg 41079856  T
Q  239 tttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaat 329  Q
    |||| |||||||||||| ||||||||||||||| | ||  || ||||||||||| |||| |||| ||||||||| | |||| | |||||||    
T  41079855 tttgctaaataaatccctaccgttaactttaactccaa--atatctatggtggaacaacattaaaagtggtccatcgtagaccttattaat 41079767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 3414952 - 3414839
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||||||| ||||| ||||| ||  |||||||||||||| |||||||||||| |||||||||||||||| ||||||||| |||  ||||||||| ||    
T  3414952 ggcttattagaacgtttagtcccctaaataatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccttcactttttcctccatt 3414853  T
Q  241 tgttaaataaatcc 254  Q
    ||  ||||||||||    
T  3414852 tgccaaataaatcc 3414839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 35295813 - 35295899
Alignment:
Q  256 gaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||||||| ||  || ||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  35295813 gaccgttaactttaaccccaa--atatctgtggtggaccaaccttaagagtggtccaccatagatcctattaattattttaatttaaac 35295899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 169 - 340
Target Start/End: Original strand, 43459481 - 43459650
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| ||||||||||||||||||||||||   || ||| |||||||||| ||||||||||||||  ||||||||| || | ||||| |||    
T  43459481 taatttcaagttttcattttggtcccacaattaataaaacgtgcgtttaagtccctcatgttttcctccgtttgccaaataaatctcggctgttaagttt 43459580  T
Q  269 aacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    ||| | ||  |||||||||||||| ||||||||| | |||| || | |||| | ||||||| || |||||||    
T  43459581 aactccaa--atgtctatggtggatcaaccttaaaaatggtacatcgtagaccttattaattttgttaattt 43459650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 40738957 - 40738843
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaa-tggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||||||||||||||||| ||   |||||||||||||||||||||||||| ||||||||||||  ||| |||||||||||||  |||| ||| ||    
T  40738957 ggcttattagatcgtttggtcccctaaacaatttcatgtttttattttggtcccataattaataaaaacaggcgttttagtccctcactttttgctctgt 40738858  T
Q  240 ttgttaaataaatcc 254  Q
    |||  ||||||||||    
T  40738857 ttgccaaataaatcc 40738843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 157 - 335
Target Start/End: Original strand, 47059122 - 47059300
Alignment:
Q  157 tggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccg 256  Q
    ||||||| || ||||||| | ||||| |||||||||| |||||||||||||    | ||||  |||||||  ||||||||||||||  |||||||||| |    
T  47059122 tggtcccctaattaattttaagttttcattttggtcctacaattaataaaatgtacgttttgatccctcactttttcctccgtttgccaaataaatcctg 47059221  T
Q  257 accgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatattttt 335  Q
    |||||||| ||||||||     | |||||||||||| ||||||||||||| | |||||||||| | ||||||| |||||    
T  47059222 accgttaagtttaaccctccaaaagtctatggtggagcaaccttaagagtagcccaccatagaccttattaattttttt 47059300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 257 - 344
Target Start/End: Original strand, 2414860 - 2414945
Alignment:
Q  257 accgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||||||||| ||  ||||||||  |||||||||||||| |||||||||||||||||||||||||| || |||||||||||    
T  2414860 accgttaactttaaccccaa--atgtctataatggaccaaccttaaaagtggtccaccatagatcctattaattttcttaatttaaac 2414945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 43441464 - 43441550
Alignment:
Q  260 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    |||||||||||||| ||  |||||||||||| ||||||||||||||||||||||||||  ||||||||||  ||||||| |||||||||    
T  43441464 gttaactttaaccctaa--atgtctatggtgtaccaaccttaagagtggtccaccataagtcctattaattattttaatgtaaactgtt 43441550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 348
Target Start/End: Original strand, 46201266 - 46201335
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||  ||||||| |||||||||    
T  46201266 atgtctatggtgaaccaaccttaagagtggtccaccatagatcatattaattattttaatataaactgtt 46201335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 257 - 344
Target Start/End: Complemental strand, 669389 - 669305
Alignment:
Q  257 accgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||||||||  ||  ||||||||||||||||| | ||||||||||||||||||||||||||||||| || |||||||||||    
T  669389 accgttaactttaacctcaa--atgtctatggtggaccatc-ttaagagtggtccaccatagatcctattaattttgttaatttaaac 669305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 141 - 344
Target Start/End: Complemental strand, 30334755 - 30334558
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    |||||| ||||||  |||||||| ||  |||||||| ||||| ||||| ||||||||||||||||||    | |||| ||||||||||    ||||||||    
T  30334755 ggcttaatagatccattggtcccctaactaatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctcatc----cctccgtt 30334660  T
Q  241 tgttaaataaatcccga-ccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatt 339  Q
    ||  |||||||| || | ||||||| | |||| | ||  |||||||||| |||||||| ||||||   |||||||||||||||||||||| |||||||||    
T  30334659 tgccaaataaattccaaaccgttaaatctaactctaa--atgtctatggaggaccaactttaagaacagtccaccatagatcctattaat-tttttaatt 30334563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 169 - 312
Target Start/End: Complemental strand, 32256485 - 32256344
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| |||||||||||| |||||||||||    | |||| ||||||||  ||||||||| ||||  |||||||| || ||||||||||||    
T  32256485 taatttcaagttttcattttggtcccataattaataaaatgtaccttttggtccctcactttttcctccatttgccaaataaattccaaccgttaacttt 32256386  T
Q  269 aacccaaatgatgtctatggtggaccaaccttaagagtggtcca 312  Q
    |||   ||  ||||||||||||||||||| |||| |||||||||    
T  32256385 aacttcaa--atgtctatggtggaccaacattaaaagtggtcca 32256344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 24844457 - 24844393
Alignment:
Q  152 tcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattt 216  Q
    ||||||| ||||||||||||||||||||||| |||||| ||| |||||||||||||||| |||||    
T  24844457 tcgtttgatcccttatttaatttcatgttttcattttgatcctacaattaataaaaatgacattt 24844393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 293
Target Start/End: Original strand, 30310137 - 30310270
Alignment:
Q  159 gtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatccc-ga 257  Q
    ||||||||  |||||||| ||||| ||||| ||||||||||||||||||    ||||| ||| |||||| ||||||||||||||  ||||||||||| ||    
T  30310137 gtcccttaaataatttcaagttttcatttttgtcccacaattaataaaacgtacatttgagttcctcattttttcctccgtttgccaaataaatcccaga 30310236  T
Q  258 ccgttaactttaacccaaatgatgtctatggtggac 293  Q
    | |||||  ||||||| ||  |||||||||||||||    
T  30310237 ctgttaaagttaaccccaa--atgtctatggtggac 30310270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 344
Target Start/End: Original strand, 44372848 - 44372929
Alignment:
Q  261 ttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||||| ||  |||||||| |||||| ||| |||||||||||||||||||||||||||||||  |||||||| ||||    
T  44372848 ttaactttaaccctaa--atgtctatagtggactaacattaagagtggtccaccatagatcctattaattattttaattaaaac 44372929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 344
Target Start/End: Original strand, 44381704 - 44381785
Alignment:
Q  261 ttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||||| ||  |||||||| |||||| ||| |||||||||||||||||||||||||||||||  |||||||| ||||    
T  44381704 ttaactttaaccctaa--atgtctatagtggactaacattaagagtggtccaccatagatcctattaattattttaattaaaac 44381785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 319
Target Start/End: Complemental strand, 40509824 - 40509675
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc--cgaccgttaact 266  Q
    |||||||| ||||| ||||||||||||||||||||||||    | ||| ||| |||||  |||||||||||||   |||||||||   ||   ||||| |    
T  40509824 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgtttaccaaataaatcattcggt-gttaagt 40509726  T
Q  267 ttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccataga 319  Q
    ||||||| ||  |||||||| ||||||||||||||||||||||||||||||||    
T  40509725 ttaaccccaa--atgtctatagtggaccaaccttaagagtggtccaccataga 40509675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 168 - 337
Target Start/End: Complemental strand, 47060566 - 47060400
Alignment:
Q  168 ttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactt 267  Q
    ||||||| | ||||| |||||||||| | |||||||||||    | |||| |||||||| | |||  ||||||||  |||||||||| ||| ||||| ||    
T  47060566 ttaattttaagttttcattttggtcctataattaataaaacgtacgttttggtccctcacccttttttccgtttgccaaataaatccggactgttaagtt 47060467  T
Q  268 taacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaa 337  Q
    |||| | ||  |||| ||||||||||||||||||||| | |||||||||||| | |||||| ||||||||    
T  47060466 taacaccaa--atgtatatggtggaccaaccttaagaatagtccaccatagaccttattaa-atttttaa 47060400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 169 - 319
Target Start/End: Complemental strand, 22115254 - 22115105
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc--cgaccgttaact 266  Q
    |||||||| ||||| ||||||||||||||||||||||||    | ||| ||| |||||  ||||||||||||    |||||||||   ||   ||||| |    
T  22115254 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgttnaccaaataaatcnttcggt-gttaagt 22115156  T
Q  267 ttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccataga 319  Q
    ||||||| ||  |||||||| ||||||||||||||||||||||||||||||||    
T  22115155 ttaaccccaa--atgtctatagtggaccaaccttaagagtggtccaccataga 22115105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 24281075 - 24281139
Alignment:
Q  144 ttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaa 208  Q
    |||||||||| |||| |||  ||  ||||||||||||||||||||||||||||||||||||||||    
T  24281075 ttattagatcatttgatcctctaaataatttcatgtttttattttggtcccacaattaataaaaa 24281139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 137 - 253
Target Start/End: Original strand, 32602927 - 32603043
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    |||||||||||| ||||  ||||||| | |  |||||||| |||||||||||||||||| |||||||||||    | |||||||||||||  |||| |||    
T  32602927 tttaggcttatttgatccattggtccttcaaataatttcaagtttttattttggtcccataattaataaaacgtacgttttagtccctcactttttactc 32603026  T
Q  237 cgtttgttaaataaatc 253  Q
    ||||||  |||||||||    
T  32603027 cgtttgccaaataaatc 32603043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 140 - 268
Target Start/End: Complemental strand, 47456494 - 47456366
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||| ||||   |||||||| |  |||||||| ||||| ||||||||||||||||||||||||    | |||| ||||||||| ||||| || ||    
T  47456494 aggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtactttttggtccctcattttttcttctgt 47456395  T
Q  240 ttgttaaataaatcccgaccgttaacttt 268  Q
    |||  ||||||||| |||| |||||||||    
T  47456394 ttgccaaataaatctcgactgttaacttt 47456366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 346
Target Start/End: Original strand, 46835689 - 46835878
Alignment:
Q  157 tggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcatttta-gtccctcatcttttcctccgtttgttaaataaatccc 255  Q
    ||||||||||  ||||||||  ||||  |||| |||| ||||||||||||| ||   ||||| ||| ||||  |||||||| |||||| ||||||||| |    
T  46835689 tggtcccttaaataatttcaaattttctttttagtcctacaattaataaaa-tgtatttttaagtctctcaatttttcctctgtttgtcaaataaatctc 46835787  T
Q  256 gaccgttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactg 346  Q
    ||  ||||| |||||||| ||||||||| ||||||||| ||  |||||   ||||| |||||| |||||||||||  |||||||||||||||    
T  46835788 gaa-gttaagtttaaccccaaatgatgtttatggtggatcattcttaaagttggtctaccatatatcctattaattattttaatttaaactg 46835878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 30333298 - 30333395
Alignment:
Q  156 ttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatc 253  Q
    |||||||| ||  |||||||| ||||| ||||||||||||||||||||||||      |||| ||||||||| |||| |||||||||| |||||||||    
T  30333298 ttggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcatttttttctccgtttgtcaaataaatc 30333395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 39981452 - 39981517
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||||||||||| |||| | ||||||||||||||||| ||||||  || ||||||||||    
T  39981452 atgtctatggtggaccaactttaaaaatggtccaccatagatccaattaattattctaatttaaac 39981517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 41328354 - 41328419
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||||||||  || ||||||||||    
T  41328354 atgtctatggtggaacaactttaaaaatggtccaccatagatcctattaattattctaatttaaac 41328419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 45454052 - 45454149
Alignment:
Q  157 tggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc 254  Q
    ||||||| || ||||||||| ||||| ||||||||| || |||||||||||    | |||||||||||||  ||||||||||||||  ||||||||||    
T  45454052 tggtcccctaattaatttcacgttttcattttggtctcataattaataaaacatacgttttagtccctcactttttcctccgtttgccaaataaatcc 45454149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 45455474 - 45455378
Alignment:
Q  157 tggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatc 253  Q
    |||||||||| |||||||||  |||| ||||||||||||||||||||||||    ||||||  |||||||  |||| |||||||||  |||||||||    
T  45455474 tggtcccttaattaatttcaaattttcattttggtcccacaattaataaaacgtacattttgatccctcacttttttctccgtttgccaaataaatc 45455378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 320
Target Start/End: Original strand, 40508404 - 40508554
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc--cgaccgttaact 266  Q
    |||||||| ||||| ||||| ||||||||||||||||||    | ||| |||||||||  |||||||||||| |  ||||||||||  ||   ||||| |    
T  40508404 taatttcaagttttcatttttgtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgttagccaaataaatccttcg-gtgttaagt 40508502  T
Q  267 ttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagat 320  Q
    |||| || ||  |||||||||||||| ||| ||||||||| |||||||||||||    
T  40508503 ttaatcccaa--atgtctatggtggatcaatcttaagagttgtccaccatagat 40508554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 319
Target Start/End: Complemental strand, 4300138 - 4299989
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatc--ccgaccgttaact 266  Q
    |||||||| ||||| ||||||||||||||||||||||||    | ||| |||||||||  |||||||| |||||  |||||||||   ||   ||||| |    
T  4300138 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcactttttcctctgtttgccaaataaatctttcg-gtgttaagt 4300040  T
Q  267 ttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccataga 319  Q
    ||||||| ||  | |||||| ||||| ||||||||||||||| ||||||||||    
T  4300039 ttaaccccaa--acgtctatagtggatcaaccttaagagtggcccaccataga 4299989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 329
Target Start/End: Original strand, 15992270 - 15992320
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaat 329  Q
    ||||||||||||||||||||||||||||| |  |||| |||||||||||||    
T  15992270 atgtctatggtggaccaaccttaagagtgatttaccaaagatcctattaat 15992320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 16756006 - 16756067
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    |||||||||||| | ||||||||| ||| ||| ||||||||||||||||||  |||||||||    
T  16756006 atgtctatggtgaaacaaccttaaaagttgtctaccatagatcctattaattattttaattt 16756067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 33096863 - 33096980
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    |||||||||||| ||||   |||||||| |  |||||||| ||| | ||||| | |||||||||||||||| |  | |||| ||||||||  ||||||||    
T  33096863 tttaggcttatttgatccaatggtccctcaaataatttcaagttctcattttaggcccacaattaataaaacttaccttttggtccctcactttttcctc 33096962  T
Q  237 cgtttgttaaataaatcc 254  Q
    ||||||  ||||||||||    
T  33096963 cgtttgccaaataaatcc 33096980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 33779068 - 33779036
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtcc 311  Q
    |||||||||||||||||||||||||||||||||    
T  33779068 atgtctatggtggaccaaccttaagagtggtcc 33779036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 38539667 - 38539735
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaa 207  Q
    |||||||| ||| || |||| ||||||| ||||||||| ||||| |||||||||||| || ||||||||    
T  38539667 taggcttaataggtcatttgatcccttaattaatttcaagttttcattttggtcccataaataataaaa 38539735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 534165 - 534114
Alignment:
Q  160 tcccttatttaatttcatgtttttattttggtcccacaattaataaaaatgg 211  Q
    ||||||| |||||||||| |||| ||||||||| |||| |||||||||||||    
T  534165 tcccttaattaatttcatcttttcattttggtctcacatttaataaaaatgg 534114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 537331 - 537382
Alignment:
Q  160 tcccttatttaatttcatgtttttattttggtcccacaattaataaaaatgg 211  Q
    ||||||| |||||||||| |||| ||||||||| |||| |||||||||||||    
T  537331 tcccttaattaatttcatcttttcattttggtctcacatttaataaaaatgg 537382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 253
Target Start/End: Original strand, 4298708 - 4298823
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc 237  Q
    ||||||||||| ||||   ||||||| ||  |||||| | |||||||||||| |||||||||||||||||   |  ||| |||||||||  ||||||||     
T  4298708 ttaggcttatttgatccaatggtcccctaaataattttaagtttttattttgatcccacaattaataaaatgtgggtttaagtccctcactttttcctct 4298807  T
Q  238 gtttgttaaataaatc 253  Q
    |||||  |||||||||    
T  4298808 gtttgccaaataaatc 4298823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 254
Target Start/End: Complemental strand, 6173570 - 6173455
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||| ||||   |||||||| |  |||||||| ||||| ||||||  |||| |||||||||||    |||||| ||||||||  ||||||||||    
T  6173570 taggcttatttgatccaatggtccctcaaataatttcaagttttcattttgtacccataattaataaaacgtacattttggtccctcactttttcctccg 6173471  T
Q  239 tttgttaaataaatcc 254  Q
    ||||  ||||||||||    
T  6173470 tttgccaaataaatcc 6173455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 33779204 - 33779105
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||| ||||  || ||||| ||  |||||||| ||||| ||||||| |||||||||||||||| |  | ||||||||||||   ||||||||||    
T  33779204 taggcttatttgatccattagtcccctaaataatttcaagttttcattttggccccacaattaataaaactcacgttttagtccctcgctttttcctccg 33779105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 11344533 - 11344571
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaa 207  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  11344533 taatttcaagttttcattttggtcccacaattaataaaa 11344571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 297
Target Start/End: Complemental strand, 24283065 - 24282939
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc-cgaccgttaactt 267  Q
    ||||||||  |||| |||||||| |||||||||| ||| | |||  ||||||||||||  ||||||||||||||  ||||||||||  |   ||||||||    
T  24283065 taatttcagattttcattttggttccacaattaaaaaaca-ggcgctttagtccctcacattttcctccgtttgccaaataaatccatgggtgttaactt 24282967  T
Q  268 taacccaaatgatgtctatggtggaccaac 297  Q
    |||||| ||  |||||||||||||| ||||    
T  24282966 taaccccaa--atgtctatggtggatcaac 24282939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 343
Target Start/End: Original strand, 48312202 - 48312238
Alignment:
Q  306 tggtccaccatagatcctattaatatttttaatttaaa 343  Q
    |||||||||||||||||||||||| |||||||||||||    
T  48312202 tggtccaccatagatcctattaat-tttttaatttaaa 48312238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 25533200 - 25533252
Alignment:
Q  155 tttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaa 207  Q
    ||||||| |||| ||||||||| ||||| |||||||||||| || ||||||||    
T  25533200 tttggtctcttaattaatttcaagttttcattttggtcccataactaataaaa 25533252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 4e-64; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 140 - 340
Target Start/End: Original strand, 23201843 - 23202043
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  23201843 aggcttattagattgtttggtcccttatttaatttcatgtttttattttggtcccacatttaataaaaatggcattttggtccctcaccttttcctccgt 23201942  T
Q  240 ttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatt 339  Q
    |||  ||||||||||| |||||||| |||||   ||||||||| ||||||||| || | ||||||||||| |||||||| ||||||||||  ||||||||    
T  23201943 ttgccaaataaatcccaaccgttaagtttaataaaaatgatgtttatggtggatcatctttaagagtggtacaccataggtcctattaattattttaatt 23202042  T
Q  340 t 340  Q
    |    
T  23202043 t 23202043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 137 - 340
Target Start/End: Original strand, 7707582 - 7707786
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    |||||| |||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||| |||  ||||||||    
T  7707582 tttaggtttattagatcttttagtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccatcacattttcctc 7707681  T
Q  237 cgtttgttaaataaatcccgaccgttaactttaac-ccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatattttt 335  Q
     |||||  |||||||||| ||| |||| ||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||  ||||    
T  7707682 tgtttgccaaataaatcctgacggttagctttaacaccaaatgatgtctttggtagaccaaccttaagagtggtccaccatagatcctattaattatttt 7707781  T
Q  336 aattt 340  Q
    |||||    
T  7707782 aattt 7707786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 140 - 348
Target Start/End: Complemental strand, 2312601 - 2312392
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||| ||||  |||||||||||  |||||||| ||||  ||||| ||||||||||||||||||    | ||| |||||||||  |||||||||||    
T  2312601 aggcttatttgatccattggtcccttagataatttcaagtttccattttagtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgt 2312502  T
Q  240 ttgttaaataaatcccgaccgttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 338  Q
    |||  |||||||||  ||||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||  |||||||    
T  2312501 ttgccaaataaatcatgaccgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaat 2312402  T
Q  339 ttaaactgtt 348  Q
    ||||||||||    
T  2312401 ttaaactgtt 2312392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 138 - 255
Target Start/End: Original strand, 10167420 - 10167537
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||    
T  10167420 ttaggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaattgcattttagtccctcatattttcctcc 10167519  T
Q  238 gtttgttaaataaatccc 255  Q
    |||||| |||||||||||    
T  10167520 gtttgtcaaataaatccc 10167537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 141 - 344
Target Start/End: Original strand, 13165494 - 13165695
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||  |||||||||||||||| |||| |||| |||||||||||||||||    
T  13165494 ggcttattagatcgtttggtccattatttaatttcatgttttcattttggtccc-taattaataaaaatggcgttttcgtccttcatcttttcctccgtt 13165592  T
Q  241 tgttaaataaatcc-cgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatt 339  Q
    ||| ||||||||||  ||| ||||| ||||||   ||  || ||||||||||||||||||||||||||||||||||||||    ||||||  ||||||||    
T  13165593 tgtcaaataaatccttgactgttaagtttaacttcaa--atttctatggtggaccaaccttaagagtggtccaccatagacttcattaattattttaatt 13165690  T
Q  340 taaac 344  Q
    |||||    
T  13165691 taaac 13165695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 139 - 297
Target Start/End: Complemental strand, 10168903 - 10168745
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  10168903 taggcttattagatcgtttggtccattatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccg 10168804  T
Q  239 tttgttaaataaatcc-cgaccgttaactttaacccaaatgatgtctatggtggaccaac 297  Q
    ||||  ||||||||||  ||| ||||||||||||||  |  |||||||||||||||||||    
T  10168803 tttgccaaataaatccatgacagttaactttaaccccca-aatgtctatggtggaccaac 10168745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 169 - 344
Target Start/End: Original strand, 52239903 - 52240078
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    ||||||||  ||||||||||| |||||||||||||||||    | |||| || | |||  |||| |||||||||  |||||||| || |  |||||||||    
T  52239903 taatttcaaatttttattttgatcccacaattaataaaacgtacgttttggttcttcaggtttttctccgtttgccaaataaattccaagggttaacttt 52240002  T
Q  269 aacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52240003 aacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 52240078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 138 - 340
Target Start/End: Original strand, 50546901 - 50547102
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc 237  Q
    |||||| ||||||||| ||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  50546901 ttaggcgtattagatcatttggtcccttatttaatttcatgtcttcattttagtcccacaattaataaaaatggcgttttagtccctcatcttttccacc 50547000  T
Q  238 gtttgttaaataaatcccgacc-gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatattttta 336  Q
    |||||  ||||||||||| ||| ||||| ||||||||  |  |||||||||| |||  |||||||  |||||||||||||| |  |||||||| ||||||    
T  50547001 gtttgccaaataaatccctacctgttaagtttaaccctca-aatgtctatggcggataaaccttagaagtggtccaccataaactctattaat-ttttta 50547098  T
Q  337 attt 340  Q
    ||||    
T  50547099 attt 50547102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 140 - 340
Target Start/End: Original strand, 4714016 - 4714216
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc-g 238  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| | ||| ||||||      
T  4714016 aggcttattagatcgtttggtcccttatttaatttcatatttttattttggtcccacaattaataaaaatggcgttttaatcccttaccttatcctcctt 4714115  T
Q  239 tttgttaaataaatc-ccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaa 337  Q
    ||||  |||||||||  ||||  |||| ||||||   ||  |||||||||||||| ||||||||||||||||||||||||||    ||||||||||| ||    
T  4714116 tttgccaaataaatcatcgactattaagtttaacttcaa--atgtctatggtggatcaaccttaagagtggtccaccatagacttcattaatattttaaa 4714213  T
Q  338 ttt 340  Q
    |||    
T  4714214 ttt 4714216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 137 - 339
Target Start/End: Complemental strand, 7708912 - 7708710
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgttttt--attttggtcccacaattaataaaaatggcattttagtccctcatcttttcc 234  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||  |||||||| | ||||||||||||| |||| ||||||||||||| ||||| |    
T  7708912 tttaggcttattagatcgtttggtcccttatttaattttatgtgttttcattttggttctacaattaataaaagtggcgttttagtccctcacctttttc 7708813  T
Q  235 tccgtttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttt 334  Q
    || |||||  ||||||||||| |  |||||||||||| | ||  || ||||||||||||||||||||| |||||| || |||||| | ||||||| || |    
T  7708812 tctgtttgccaaataaatcccaagtgttaactttaactctaa--atatctatggtggaccaaccttaaaagtggtacatcatagaccttattaattttgt 7708715  T
Q  335 taatt 339  Q
    |||||    
T  7708714 taatt 7708710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 139 - 340
Target Start/End: Original strand, 33231385 - 33231585
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||||||||||| | |||    
T  33231385 taggcttattagatcatttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaaatggtgttttagtccctcatctttttcaccg 33231484  T
Q  239 tttgttaaataaatcccgac-cgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaa 337  Q
    ||||  |||||||| |  ||  ||||| ||||||||  |  ||||||||||||||| |||||||  |||||||||||||| |  |||||||| |||||||    
T  33231485 tttgccaaataaattcatacttgttaagtttaaccctca-aatgtctatggtggacaaaccttagaagtggtccaccataaactctattaat-tttttaa 33231582  T
Q  338 ttt 340  Q
    |||    
T  33231583 ttt 33231585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 141 - 310
Target Start/End: Complemental strand, 23204071 - 23203904
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||| |||| |||| ||||||||| |||||||    
T  23204071 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacatttaataaaaatggcgttttggtccgtcatctttttctccgtt 23203972  T
Q  241 tgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtc 310  Q
    ||  || |||||||| |   ||||||||||| | ||  || ||||||||||| ||||||||| |||||||    
T  23203971 tgccaattaaatcccaagtattaactttaactctaa--atatctatggtggatcaaccttaaaagtggtc 23203904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 139 - 344
Target Start/End: Original strand, 11968507 - 11968712
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||| |||| | |||| ||| |  |||||||| ||||| ||||||||| ||||||||||||||    | |||| ||||||||  |||| |||||    
T  11968507 taggcttatttgatcttatggttcctcaaataatttcaagttttcattttggtctcacaattaataaaacatactttttggtccctcagattttgctccg 11968606  T
Q  239 tttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 338  Q
    ||||| |||||||| ||| | || ||||||||| || || ||||||||| |||||||||||||||||||||||| ||||||||||||||||  |||||||    
T  11968607 tttgtaaaataaattccggctgtcaactttaactcagattatgtctatgatggaccaaccttaagagtggtccatcatagatcctattaattattttaat 11968706  T
Q  339 ttaaac 344  Q
    ||||||    
T  11968707 ttaaac 11968712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 169 - 344
Target Start/End: Complemental strand, 27851022 - 27850853
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| ||||||||||||||||||||||||     ||||| ||||||||  |||||||||||       ||||||||| || ||||| |||    
T  27851022 taatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccgt-------ataaatcccaacagttaagttt 27850930  T
Q  269 aacc-caaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  27850929 aacctcaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaattattttaatttaaac 27850853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 169 - 348
Target Start/End: Complemental strand, 6349643 - 6349460
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| ||||||||||||||||||||||||    | |||| |||||||| |||||| |||||||   ||||| ||||||| |||||| |||    
T  6349643 taatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaccttttcttccgtttaccaaatagatcccgaacgttaagttt 6349544  T
Q  269 aaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatat---ttttaatttaaactgtt 348  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||||||||||| | |||  ||||   |||||||||||||||||    
T  6349543 aaccccaaatgatgtatatggtggatcaaccttaagagtggtccaccatagaccatatatatatatattttaatttaaactgtt 6349460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 228 - 348
Target Start/End: Complemental strand, 15450106 - 15449986
Alignment:
Q  228 cttttcctccgtttgttaaataaatcccgaccgttaactttaac-ccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctatt 326  Q
    |||||||||||||||  |||||||||   || ||||| |||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  15450106 cttttcctccgtttgccaaataaatctt-acggttaagtttaactccaaatgttgtctatcgtggaccaaccttaagagtggtccaccatagatcctatt 15450008  T
Q  327 aatatttttaatttaaactgtt 348  Q
    ||||||||||||||||||||||    
T  15450007 aatatttttaatttaaactgtt 15449986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 169 - 344
Target Start/End: Original strand, 1794437 - 1794613
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| |||||| || ||||||||||||||    | ||||  |||||||  |||||||| |||||| ||||||||||  || ||||| |||    
T  1794437 taatttcaagttttcattttgatctcacaattaataaaatataccttttgatccctcactttttcctctgtttgtcaaataaatcctaacggttaagttt 1794536  T
Q  269 aa-cccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    || |||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||  ||||||||||||||    
T  1794537 aatcccaaatgatgtatatggtggaccaaccttaagagtggtccaccatagaccttattaaattttttaatttaaac 1794613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 54866748 - 54866619
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||  ||||||||||| |  ||||||||||||    
T  54866748 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggt-ccacaattaataaaaatggtgttttagtcccttacgttttcctccgtt 54866650  T
Q  241 tgttaaataaatcccgaccgttaactttaac 271  Q
    ||  |||||||||  ||| ||||| ||||||    
T  54866649 tgccaaataaatcatgactgttaagtttaac 54866619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 137 - 340
Target Start/End: Original strand, 6348149 - 6348350
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    |||||||||||| ||||   |||||||| |  |||||||| ||||| ||||||||||||||||||||||||    | |||| || |||||  ||||||||    
T  6348149 tttaggcttatttgatcaaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggttcctcactttttcctc 6348248  T
Q  237 cgtttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatattttta 336  Q
     |||||| |||||||| | ||  ||||| |||||||  ||  |||||||||||||||||||||||||||||||||||| |||| | ||||||||||| ||    
T  6348249 tgtttgtcaaataaattctgatggttaagtttaacctcaa--atgtctatggtggaccaaccttaagagtggtccaccgtagaccttattaatatttcta 6348346  T
Q  337 attt 340  Q
    ||||    
T  6348347 attt 6348350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 140 - 312
Target Start/End: Complemental strand, 52241274 - 52241105
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||| |||| |||||||| ||||||||||||||||||||||| |||||| | |||||||||||||||    | ||||  | ||||||||||||||||||    
T  52241274 aggctcattacatcgtttgatcccttatttaatttcatgttttcattttgattccacaattaataaaacgtacgttttgattcctcatcttttcctccgt 52241175  T
Q  240 ttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 312  Q
    |||  |||||||| |||||||||||||||||| | ||  || |||||||| ||||| |||||| |||||||||    
T  52241174 ttgccaaataaattccgaccgttaactttaactccaa--atatctatggt-gaccatccttaaaagtggtcca 52241105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 171 - 297
Target Start/End: Complemental strand, 33232785 - 33232662
Alignment:
Q  171 atttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactttaa 270  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||  |||||||||    |||||||||||||    
T  33232785 atttcatatttttattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatcttttccgttaactttaa 33232686  T
Q  271 cccaaatgatgtctatggtggaccaac 297  Q
    | |||   |||||||| ||||||||||    
T  33232685 ctcaa---atgtctattgtggaccaac 33232662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 169 - 297
Target Start/End: Original strand, 1188869 - 1188996
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaac-tt 267  Q
    |||||||| ||||||||||||||||||||||||||||||    |||||| ||||||||  ||||||||||||||  ||||||||||||| ||||||| ||    
T  1188869 taatttcaagtttttattttggtcccacaattaataaaacgtacattttggtccctcactttttcctccgtttgccaaataaatcccgaacgttaacttt 1188968  T
Q  268 taacccaaatgatgtctatggtggaccaac 297  Q
    |||||| ||  |||||||||||| ||||||    
T  1188969 taaccctaa--atgtctatggtgaaccaac 1188996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 159 - 349
Target Start/End: Complemental strand, 42810303 - 42810114
Alignment:
Q  159 gtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgac 258  Q
    ||||||||  ||||||||  |||| ||||||||||||||||||||||||    | ||| |||||||||  ||||||||||||||  ||||||||||        
T  42810303 gtcccttaaataatttcaacttttcattttggtcccacaattaataaaacgtacttttaagtccctcacattttcctccgtttgccaaataaatccttgg 42810204  T
Q  259 cgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgttg 349  Q
     ||||| ||||||||  | ||||||||||||| ||||| ||||||||| |||||||||||| | ||||||  |||||||||||||| ||||    
T  42810203 tgttaagtttaaccccca-gatgtctatggtgaaccaatcttaagagtagtccaccatagaccttattaaattttttaatttaaaccgttg 42810114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 144 - 297
Target Start/End: Complemental strand, 50548334 - 50548188
Alignment:
Q  144 ttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgt 243  Q
    ||||||||||||||||||||||||||    ||||||||| |||||||||||||||||||||| |||  | |||||||||||||  |||||||| |||||     
T  50548334 ttattagatcgtttggtcccttattt----tcatgttttcattttggtcccacaattaataagaataacgttttagtccctcacattttcctctgtttgc 50548239  T
Q  244 taaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaac 297  Q
     ||||||||||   |||| ||||||||| |||   |||||||| ||||||||||    
T  50548238 caaataaatcctttccgtcaactttaactcaa---atgtctattgtggaccaac 50548188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 147 - 253
Target Start/End: Original strand, 54865109 - 54865214
Alignment:
Q  147 ttagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaa 246  Q
    |||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||||| ||||| |  |||||||||||||  ||||||||||||||| ||    
T  54865109 ttagattgtttggtcccttatttaattttatgttttcattttggtcccataattaat-aaaattgtgttttagtccctcacattttcctccgtttgtcaa 54865207  T
Q  247 ataaatc 253  Q
    |||||||    
T  54865208 ataaatc 54865214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 260 - 344
Target Start/End: Original strand, 56085465 - 56085547
Alignment:
Q  260 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||    
T  56085465 gttaactttaaccccaa--atgtctatggtggactaaccttaagagtggtccaccatagatcctattaattattttaatttaaac 56085547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 251 - 344
Target Start/End: Original strand, 4871602 - 4871694
Alignment:
Q  251 atcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||| ||||||||||||||||||  |  ||||||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||    
T  4871602 atcctgaccgttaactttaaccctcaa-atgtctatggtggaccaacctaaagagtggtccaccgtagatcctattaattattttaatttaaac 4871694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 141 - 340
Target Start/End: Original strand, 53432060 - 53432258
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    |||||| ||| ||||||| ||||||| ||||||||| ||||| |||||||||||| || |||||||| |    |||| ||||||||  ||| ||| ||||    
T  53432060 ggcttaataggtcgtttgatcccttaattaatttcaagttttcattttggtcccataagtaataaaacttatgttttggtccctcaagtttgccttcgtt 53432159  T
Q  241 tgttaaataaatccc-gaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatt 339  Q
     || ||||||||||| ||| ||||| |||||||| ||  |||||||||||| |||||| ||||||||||  ||||||| | | ||||||| |||| ||||    
T  53432160 ggtcaaataaatccctgacggttaagtttaaccccaa--atgtctatggtgaaccaactttaagagtggctcaccatacaccttattaattttttcaatt 53432257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 169 - 338
Target Start/End: Original strand, 1829779 - 1829947
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaac-tt 267  Q
    |||||||| ||||| ||||||||||||||||||||||||      |||||||||||||  ||||||| ||||||| |||||||| ||||| |||||| ||    
T  1829779 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttagtccctcactttttcctacgtttgtcaaataaattccgactgttaacttt 1829878  T
Q  268 taacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 338  Q
    |||| | ||  |||||||| |||||||||| |||| ||||||||| | |||| | ||||||| || |||||    
T  1829879 taactctaa--atgtctatcgtggaccaactttaaaagtggtccatcgtagaccttattaattttattaat 1829947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 169 - 319
Target Start/End: Original strand, 52963595 - 52963743
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| ||||||||| |||||||||||||       |||| ||||||||  |||| |||||||||| ||||||||| |||| |||||||||    
T  52963595 taatttcaagttttcattttggtctcacaattaataaatcgtatgttttggtccctcaagtttttctccgtttgtcaaataaatctcgactgttaacttt 52963694  T
Q  269 aacccaaatgatgtctatggtggaccaaccttaagagtggtccaccataga 319  Q
    ||| | ||  ||||||||||||||||| |||||| ||||||||| ||||||    
T  52963695 aactccaa--atgtctatggtggaccagccttaaaagtggtccatcataga 52963743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 169 - 297
Target Start/End: Complemental strand, 44503768 - 44503642
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaac-tt 267  Q
    |||||||| ||||||||||||||| |||||||||||||  |  |||||| ||||||||  |||||||| |||||  ||||||||||||||||||||| ||    
T  44503768 taatttcaagtttttattttggtctcacaattaataaacgta-cattttggtccctcactttttcctctgtttgccaaataaatcccgaccgttaacttt 44503670  T
Q  268 taacccaaatgatgtctatggtggaccaac 297  Q
    |||||| ||  |||||||||||| ||||||    
T  44503669 taaccctaa--atgtctatggtgaaccaac 44503642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 302
Target Start/End: Complemental strand, 1588210 - 1588045
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc 237  Q
    ||||||||||| |||| |||||||||| |  |||||| | ||||| ||||| ||||||||||||||||||    | ||| | |||||||  |||||||||    
T  1588210 ttaggcttatttgatcttttggtccctcaaataattttaagttttcattttagtcccacaattaataaaatgtacgtttaaatccctcactttttcctcc 1588111  T
Q  238 gtttgttaaataaatcccgaccgttaactttaaccc-aaatgatgtctatggtggaccaaccttaa 302  Q
    ||||   ||||||||   ||| ||||| |||||||| |||||||||||||||| ||||||||||||    
T  1588110 gtttaccaaataaattatgactgttaagtttaaccccaaatgatgtctatggtagaccaaccttaa 1588045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 44498596 - 44498661
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||    
T  44498596 atgtctatggtggatcaaccttaagagtggtccaccatagatcctattaattattttaattaaaac 44498661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 168 - 310
Target Start/End: Original strand, 40792776 - 40792914
Alignment:
Q  168 ttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactt 267  Q
    ||||||| | ||||| ||||||||||||||||||||||||    |||||| ||||||||  |||| |||||||||  |||||||||||||  ||||||||    
T  40792776 ttaattttaagttttcattttggtcccacaattaataaaacatacattttggtccctcagatttttctccgtttgccaaataaatcccga--gttaactt 40792873  T
Q  268 taacccaaatgatgtctatggtggaccaaccttaagagtggtc 310  Q
    ||||   ||  |||||||| ||||||||||||||| |||||||    
T  40792874 taactttaa--atgtctatagtggaccaaccttaaaagtggtc 40792914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 4129019 - 4129117
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactt 267  Q
    |||||||| ||||| ||||||||||||||||||||||||    |||||| |||||| |  |||| |||||||||  |||||||||||||||||||||||    
T  4129019 taatttcaagttttcattttggtcccacaattaataaaatgtacattttggtcccttacttttttctccgtttgccaaataaatcccgaccgttaactt 4129117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 272
Target Start/End: Original strand, 390230 - 390346
Alignment:
Q  156 ttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatccc 255  Q
    |||||||| ||  |||||||| ||||| ||||||||||||||||||||||||     ||||| ||||||||| | ||||||||||||  ||||||||||     
T  390230 ttggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcatttcttcctccgtttgccaaataaatcct 390329  T
Q  256 gaccgttaactttaacc 272  Q
    ||| ||||| |||||||    
T  390330 gactgttaagtttaacc 390346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 343
Target Start/End: Complemental strand, 19750296 - 19750211
Alignment:
Q  256 gaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaa 343  Q
    |||||||||||||||||  ||  ||||||||||||||| || ||||| ||| ||||||||||||||||||||||  ||||||||||||    
T  19750296 gaccgttaactttaaccttaa--atgtctatggtggacaaatcttaaaagttgtccaccatagatcctattaattattttaatttaaa 19750211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 343
Target Start/End: Original strand, 19789510 - 19789595
Alignment:
Q  256 gaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaa 343  Q
    |||||||||||||||||  ||  ||||||||||||||| || ||||| ||| ||||||||||||||||||||||  ||||||||||||    
T  19789510 gaccgttaactttaaccttaa--atgtctatggtggacaaatcttaaaagttgtccaccatagatcctattaattattttaatttaaa 19789595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 140 - 255
Target Start/End: Complemental strand, 1831382 - 1831267
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||| ||||   |||||||| | ||||||||| ||||| ||||| ||||||||||||||||||    |||||| ||||||||| ||||||||| |    
T  1831382 aggcttatttgatccaatggtccctcaattaatttcaagttttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccat 1831283  T
Q  240 ttgttaaataaatccc 255  Q
    || | |||||||||||    
T  1831282 ttttcaaataaatccc 1831267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 7053321 - 7053376
Alignment:
Q  288 gtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaa 343  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||    
T  7053321 gtggaccaatcttaagagtgatccaccatagatcctattaatttttttaatttaaa 7053376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 329
Target Start/End: Complemental strand, 393728 - 393569
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatccc-gaccgttaactt 267  Q
    ||||||||  |||| |||||||||||||||||||||||||     |||| ||||||||  |||| |||||||||  ||||||||||| ||| ||||||||    
T  393728 taatttcaaattttcattttggtcccacaattaataaaaagtatcttttggtccctcacttttttctccgtttgccaaataaatcccggactgttaactt 393629  T
Q  268 taacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaat 329  Q
    |||  | ||  |||| ||| ||||||||||||||| ||||||||| | |||| | |||||||    
T  393628 taattctaa--atgtttatagtggaccaaccttaaaagtggtccatcgtagaccttattaat 393569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 279 - 341
Target Start/End: Original strand, 22069370 - 22069432
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattta 341  Q
    ||||||||||||||| |||||||| |||||| |||||||||  ||||||||||||||||||||    
T  22069370 atgtctatggtggacgaaccttaaaagtggttcaccatagactctattaatatttttaattta 22069432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 279 - 329
Target Start/End: Original strand, 40723362 - 40723412
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaat 329  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  40723362 atgtatatggtggaccaaccttaagagtggtctaccatagatcctattaat 40723412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 229 - 344
Target Start/End: Complemental strand, 52138825 - 52138709
Alignment:
Q  229 ttttcctccgtttgttaaataaatcccgaccgttaactttaaccc--aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctatt 326  Q
    |||| ||||||| || ||| || ||| ||| ||||||||||||||  ||||| | |||||||| ||||||| |||||| |||||||||||||||||||||    
T  52138825 ttttgctccgttggtcaaaaaagtcctgactgttaactttaacccctaaatg-tctctatggtagaccaactttaagaatggtccaccatagatcctatt 52138727  T
Q  327 aatatttttaatttaaac 344  Q
    |||  || ||||||||||    
T  52138726 aattattctaatttaaac 52138709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 145 - 255
Target Start/End: Original strand, 53204363 - 53204473
Alignment:
Q  145 tattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgtt 244  Q
    ||||||||| |||| |||||||  |||||| ||||||| |||||| || ||||||||||||||  ||| ||||||| |||||  |||| |||||||||      
T  53204363 tattagatcatttgatcccttaaataatttaatgttttcattttgatctcacaattaataaaacaggcgttttagttcctcaattttttctccgtttgcc 53204462  T
Q  245 aaataaatccc 255  Q
    |||||||||||    
T  53204463 aaataaatccc 53204473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 53435857 - 53435694
Alignment:
Q  155 tttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc 254  Q
    |||| ||||||| ||||||||| ||||| |||||||||||| || |||||||| |    |||| | ||||||  ||| |||||||| || ||||||||||    
T  53435857 tttgatcccttaattaatttcaagttttcattttggtcccataagtaataaaactcatgttttggcccctcaagtttacctccgttggtcaaataaatcc 53435758  T
Q  255 c-gaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccataga 319  Q
      ||| ||||| ||||||   ||  ||||||||||| |||||||||||||||||||||||| ||||    
T  53435757 ttgacggttaagtttaactttaa--atgtctatggtagaccaaccttaagagtggtccaccgtaga 53435694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 271
Target Start/End: Original strand, 2310918 - 2311051
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc 237  Q
    ||||||||||| ||||   ||||||  || ||||||||| ||||| ||||||||||||||||||||||||    | |||| ||||||||  |||||||||    
T  2310918 ttaggcttatttgatccaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcagattttcctcc 2311017  T
Q  238 gtttgttaaataaatcccgaccgttaactttaac 271  Q
    | |||  ||||||||||  || ||||||||||||    
T  2311018 gattgccaaataaatcctaacagttaactttaac 2311051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 26629909 - 26629994
Alignment:
Q  260 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    |||||||||||||| ||  |||| ||||||| |||||| |||||||||||||||||||| ||||||||||  ||||||| |||||||||    
T  26629909 gttaactttaaccccaa--atgtttatggtgaaccaac-ttaagagtggtccaccataggtcctattaattattttaatgtaaactgtt 26629994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 344
Target Start/End: Complemental strand, 11438668 - 11438484
Alignment:
Q  159 gtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatc-ccga 257  Q
    ||||| ||| |||||| | ||||||||||||||| || |||||||||||    | |||| ||||||||  ||||||||| |||| |||||||||| | ||    
T  11438668 gtcccctatataatttgaagtttttattttggtctcataattaataaaacactcgttttggtccctcactttttcctccatttgctaaataaatctctga 11438569  T
Q  258 ccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |  |||| |||||||| ||  ||||||| |||||||||||  |    ||||||||||||| | ||||||||| | ||||||||||||    
T  11438568 cttttaagtttaaccccaa--atgtctacggtggaccaacagtgtaggtggtccaccataaaccctattaatttctttaatttaaac 11438484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 263 - 348
Target Start/End: Original strand, 36845531 - 36845614
Alignment:
Q  263 aactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    ||||||||||| ||  |||| |||| | ||||||| |||||||||||||||||||| ||||||||||  ||||||| |||||||||    
T  36845531 aactttaaccctaa--atgtttatgatagaccaacattaagagtggtccaccataggtcctattaattattttaatgtaaactgtt 36845614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 168 - 345
Target Start/End: Original strand, 42871120 - 42871295
Alignment:
Q  168 ttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactt 267  Q
    |||||||||  |||| |||||| |||||||||||||||||    | |||| ||||||||  ||||||||||||||  |||||||||| ||| ||||| ||    
T  42871120 ttaatttcaaattttcattttgatcccacaattaataaaacgtacgttttggtccctcactttttcctccgtttgccaaataaatcctgactgttaagtt 42871219  T
Q  268 taacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaact 345  Q
    |||  | ||  ||||||| |||||| |||| |||    | ||||||| |||| ||||||||| | |||||||||||||    
T  42871220 taattccaa--atgtctacggtggatcaacattatatatagtccaccgtagaccctattaatttctttaatttaaact 42871295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 26496290 - 26496225
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||||| || |||| | ||||||||||||||||||||||||  || ||||||||||    
T  26496290 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaac 26496225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 49896561 - 49896500
Alignment:
Q  283 ctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||||||||| |||||||||||||  |||||||| |||||  |||||||||||||    
T  49896561 ctatggtggaccaacctaaagagtggtccactgtagatcctgttaattattttaatttaaac 49896500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 53205573 - 53205488
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc 254  Q
    ||||||||  |||| ||||| ||||||||||||| ||||  ||| |||||||||||||  ||||||||||||||  ||||||||||    
T  53205573 taatttcagattttcattttcgtcccacaattaaaaaaataggcgttttagtccctcactttttcctccgtttgccaaataaatcc 53205488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 56157468 - 56157419
Alignment:
Q  288 gtggaccaaccttaagagtggtccaccatagatcctattaatatttttaa 337  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  56157468 gtggaccaatcttaagagtgttccaccatagatcctattaatttttttaa 56157419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 37882860 - 37882944
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatc 253  Q
    |||||||| ||||| ||||| ||||||||||||||||||    | |||| |||||||| |||||||||||||||  |||||||||    
T  37882860 taatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctcaccttttcctccgtttgccaaataaatc 37882944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 27847704 - 27847742
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaa 207  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  27847704 taatttcaagtttttattttggtcccacaattaataaaa 27847742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 31965860 - 31965946
Alignment:
Q  168 ttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc 254  Q
    ||||||||| ||||||||| |||||| |||||||| ||||    |||||| ||||||||  ||||||||||||||  ||||||||||    
T  31965860 ttaatttcaagtttttattctggtcctacaattaagaaaatgtacattttggtccctcactttttcctccgtttgccaaataaatcc 31965946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 348
Target Start/End: Original strand, 45535207 - 45535248
Alignment:
Q  306 tggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  45535207 tggtccaccatagatcctattaat-tttttaatttaaactgtt 45535248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 28590880 - 28590816
Alignment:
Q  284 tatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    ||||||| |||||| ||||||||| | || ||||||||||||||||  ||||||| |||||||||    
T  28590880 tatggtgaaccaactttaagagtgattcatcatagatcctattaattattttaatataaactgtt 28590816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 34326868 - 34326912
Alignment:
Q  285 atggtggaccaaccttaagagtggtccaccatagatcctattaat 329  Q
    ||||||||||||| |||||||||||| || |||||||||||||||    
T  34326868 atggtggaccaactttaagagtggtctactatagatcctattaat 34326912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 13166813 - 13166689
Alignment:
Q  215 tttagtccctcatcttttcctccgtttgttaaataaatccc-gaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccac 313  Q
    ||||||||||||  ||||| ||||||||  ||||||||||  ||| ||||| ||||||   ||  ||||||||| |||||||||| |||||||| |||||    
T  13166813 tttagtccctcactttttcatccgtttgccaaataaatccttgactgttaagtttaacttcaa--atgtctatgatggaccaaccgtaagagtgatccac 13166716  T
Q  314 catagatcctattaatatttttaattt 340  Q
    ||||||    ||||||||||| |||||    
T  13166715 catagaattcattaatattttaaattt 13166689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 24426335 - 24426438
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||| ||||   |||||||| |  |||||||| ||||| ||||||||| ||||||||||||||    | |||| ||||||||  ||||||||||    
T  24426335 taggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccctcactttttcctccg 24426434  T
Q  239 tttg 242  Q
    ||||    
T  24426435 tttg 24426438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 252
Target Start/End: Original strand, 49342645 - 49342728
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaat 252  Q
    |||||| | ||||| |||||| |||||||||||||||||    | ||| |||||||||  ||||||||| ||||||||||||||    
T  49342645 taattttaagttttcattttgatcccacaattaataaaatgtacgtttaagtccctcactttttcctccatttgttaaataaat 49342728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 8682829 - 8682768
Alignment:
Q  279 atgtctatggtggaccaac-cttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    ||||||||||||||| ||  ||||||||||||||| |||||||| ||||||| ||||||||||    
T  8682829 atgtctatggtggactaaatcttaagagtggtccatcatagatcatattaat-tttttaattt 8682768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 306 - 344
Target Start/End: Complemental strand, 23103962 - 23103925
Alignment:
Q  306 tggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  23103962 tggtccaccatagatcctattaat-tttttaatttaaac 23103925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 344
Target Start/End: Original strand, 1519929 - 1520010
Alignment:
Q  260 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||| ||  |||| |||||| || || | |||| |||| |||||||||||||||||||||  |||||||||||||    
T  1519929 gttaactttaaccccaa--atgtttatggtagatcacctttaa-agtgatccaccatagatcctattaattattttaatttaaac 1520010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 268
Target Start/End: Original strand, 1587218 - 1587307
Alignment:
Q  179 tttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||| ||||| ||| ||||||||||||||    | |||| ||||||||  ||||||||||||||  |||||||||||||  |||||||||    
T  1587218 ttttcattttagtctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatcccgatggttaacttt 1587307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 2311088 - 2311149
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    |||||||||||||||||| ||||| ||||||| | | |||| | |||||||||| |||||||    
T  2311088 atgtctatggtggaccaatcttaaaagtggtctatcgtagaccttattaatattgttaattt 2311149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 7e-63; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 140 - 338
Target Start/End: Complemental strand, 13117752 - 13117554
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||  |||||||| ||    
T  13117752 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctctgt 13117653  T
Q  240 ttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 338  Q
    |||  ||||||||||||||| | || ||||||||||||||| | ||| |||||||||| |||| ||||||||| ||||||||||||||||  |||||||    
T  13117652 ttgccaaataaatcccgaccatcaagtttaacccaaatgatctatatagtggaccaactttaaaagtggtccatcatagatcctattaattattttaat 13117554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 138 - 329
Target Start/End: Original strand, 42098558 - 42098749
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||  |||| ||  |||  ||||    
T  42098558 ttaggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaagtggcgttttgatcccccacgtttgtctcc 42098657  T
Q  238 gtttgttaaataaatcccgaccgttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaat 329  Q
    |||||  |||||||| ||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  42098658 gtttgccaaataaat-ccgactgttaattttaaccccaaatgatgtctttggtggaccaaccttaaaagtggtccaccatagatcctattaat 42098749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 138 - 340
Target Start/End: Complemental strand, 42100227 - 42100027
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc 237  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||  |||||||| |||||||||    
T  42100227 ttaggcttattagatcgtttgatcccttatttaatttcatgttttcattttggtctcacaattaataaaaatggcgttttgatccctcatattttcctcc 42100128  T
Q  238 gtttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaa 337  Q
    |||||  |||||| ||||||| ||||||||||||   ||  |||||| ||||||||||||||||| ||||||||| | |||| | ||||||| || ||||    
T  42100127 gtttgccaaataattcccgactgttaactttaacttcaa--atgtctttggtggaccaaccttaaaagtggtccatcgtagaccttattaattttgttaa 42100030  T
Q  338 ttt 340  Q
    |||    
T  42100029 ttt 42100027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 139 - 340
Target Start/End: Original strand, 13116326 - 13116525
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| |||  ||||||||||    
T  13116326 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccttcacattttcctccg 13116425  T
Q  239 tttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 338  Q
    ||||  |||||||||||||| |||||||||||| | ||  ||||||||  | |||||| ||| ||||||||||| | |||| ||||||| | || |||||    
T  13116426 tttgccaaataaatcccgactgttaactttaactccaa--atgtctataatagaccaatcttcagagtggtccatcgtagaccctattacttttgttaat 13116523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 169 - 344
Target Start/End: Complemental strand, 32798622 - 32798447
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| ||||||||||||||||||||||||    | |||||||||||||  |||| |||||||||| ||||||||||  || ||||| |||    
T  32798622 taatttcaagttttcattttggtcccacaattaataaaacgtaccttttagtccctcaattttttctccgtttgtcaaataaatcctcacggttaagttt 32798523  T
Q  269 aacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  32798522 aactcaaatgatgtctatggtggatcaaccttaagagtggtccaccatagatcctattaattattttaatttaaac 32798447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 140 - 271
Target Start/End: Complemental strand, 17339668 - 17339537
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||  |||||||||||    
T  17339668 aggcttattagatcgtttggtcccttatttaatttcatattttcattttggtccaacaattaataaaaatggcattttagtccctcacgttttcctccgt 17339569  T
Q  240 ttgttaaataaatcccgaccgttaactttaac 271  Q
    |||  |||||||||| ||| ||||| ||||||    
T  17339568 ttgccaaataaatcctgactgttaagtttaac 17339537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 169 - 344
Target Start/End: Complemental strand, 45281278 - 45281104
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| |||||||||| |||||||||||||||    ||| | ||| |||  ||||||||| ||||  ||||||||||| || |||||||||    
T  45281278 taatttcaagttttcattttggtccaacaattaataaaaatatgttttga-tccttcagattttcctccatttgccaaataaatcccaacagttaacttt 45281180  T
Q  269 aacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    || |||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  45281179 aatccaaatgatgtctacggtggaccaaccttaagagtggtctaccataaatcctattaatatttttaatttaaac 45281104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 140 - 253
Target Start/End: Original strand, 17338038 - 17338151
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  |||| ||||||    
T  17338038 aggcttattaaatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacatttttctccgt 17338137  T
Q  240 ttgttaaataaatc 253  Q
    |||  |||||||||    
T  17338138 ttgccaaataaatc 17338151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 179 - 348
Target Start/End: Original strand, 4810505 - 4810670
Alignment:
Q  179 tttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactttaaccc-aaat 277  Q
    ||||||||||||||||| |||||||||||      |||| |||| |||  |||| |||||||||  |||||||||||||| |||||||||||||| ||||    
T  4810505 tttttattttggtcccataattaataaaacgtatgttttggtccttcaaatttttctccgtttgccaaataaatcccgacggttaactttaaccccaaat 4810604  T
Q  278 gatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    |||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4810605 gatgtctatggtggaa-----ttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 4810670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 139 - 344
Target Start/End: Complemental strand, 32695395 - 32695189
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||| |||   ||||||||| |  |||||||| ||||| ||||||||| ||||||||||||||    | ||| ||||| |||  |||||||| |    
T  32695395 taggcttatttgattcattggtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtacgtttaagtccttcacgttttcctctg 32695296  T
Q  239 tttgttaaataaatcccgaccgttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaa 337  Q
    ||||  |||| | ||| ||||||||| |||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||  ||||||    
T  32695295 tttgccaaattagtcctgaccgttaagtttaaccccaaatgatgtctatggtgaaccaatcttaagattggtccaccatagatcctattaattattttaa 32695196  T
Q  338 tttaaac 344  Q
    |||||||    
T  32695195 tttaaac 32695189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 140 - 344
Target Start/End: Complemental strand, 44076482 - 44076277
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||| ||||   |||||||| |  ||||||||  |||||||||||||||||||||||||||||      |||| || |||||  |||||||||||    
T  44076482 aggcttatttgatccaatggtccctcaaataatttcaaatttttattttggtcccacaattaataaaacgtatcttttggtgcctcaatttttcctccgt 44076383  T
Q  240 ttgttaaataaatcccgaccgttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 338  Q
    |||  ||||||||||| || ||||| |||||||| ||||||||||||||||||| |||| |||| | || ||||||||| ||| ||||||| ||||||||    
T  44076382 ttgccaaataaatccctacagttaagtttaaccccaaatgatgtctatggtggaacaacattaaaaatgatccaccataaatcttattaatttttttaat 44076283  T
Q  339 ttaaac 344  Q
    ||||||    
T  44076282 ttaaac 44076277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 169 - 344
Target Start/End: Original strand, 6397809 - 6397982
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    ||||||||| |||| |||||||||||||||||||||||| |  |||||||||||||||| |||| |||||||||  |||||||||  ||  ||||| |||    
T  6397809 taatttcatattttcattttggtcccacaattaataaaacttacattttagtccctcatttttttctccgtttgccaaataaatcatgaatgttaaattt 6397908  T
Q  269 aac-ccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||| |||||| |   |||||||  ||||||||| | |||||||||||||||| | ||||||| ||||||||||||||    
T  6397909 aactccaaataa---ctatggtaaaccaacctttacagtggtccaccatagaccttattaatttttttaatttaaac 6397982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 214 - 334
Target Start/End: Complemental strand, 42872234 - 42872116
Alignment:
Q  214 ttttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccac 313  Q
    ||||||||| |||  ||||||||||||||| |||||||||| ||| |||||||||||||  ||  ||||||||||| |||||||||||||||||||| ||    
T  42872234 ttttagtccttcactttttcctccgtttgtcaaataaatcctgacggttaactttaacctcaa--atgtctatggtagaccaaccttaagagtggtctac 42872137  T
Q  314 catagatcctattaatatttt 334  Q
    |||||||||||||||| ||||    
T  42872136 catagatcctattaatttttt 42872116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 138 - 329
Target Start/End: Original strand, 42877614 - 42877803
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc 237  Q
    ||||||||| ||| |  ||||||| |||| ||||||||| ||||| ||||||||| || || |||||||| |    |||| ||||||||  |||  || |    
T  42877614 ttaggcttaataggttatttggtctcttaattaatttcaagttttcattttggtctcataactaataaaactcatgttttggtccctcacgtttgtcttc 42877713  T
Q  238 gtttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaat 329  Q
    ||  || |||||||||||||| |||||||||||||| ||  |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  42877714 gtcagtcaaataaatcccgacggttaactttaaccccaa--atgtgtatggtggaccaaccttaagaatggtccaccatagatcctattaat 42877803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 260 - 344
Target Start/End: Complemental strand, 24192661 - 24192579
Alignment:
Q  260 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||    
T  24192661 gttaactttaaccctaa--atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaattaaaac 24192579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 169 - 344
Target Start/End: Original strand, 42870839 - 42871015
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| ||||||||||||||||||||||||    | ||||||||||| |  ||||| || |||||   ||| ||||| ||| ||||| |||    
T  42870839 taatttcaagttttcattttggtcccacaattaataaaacgtacgttttagtcccttactttttcgtctgtttgccgaatgaatcctgactgttaagttt 42870938  T
Q  269 aaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||| ||| ||||||||| ||||||||| ||||||||||||||||| |||| | ||||||  ||| ||||||||||    
T  42870939 aaccccaaaagatgtctattgtggaccaatcttaagagtggtccaccgtagaccttattaaattttgtaatttaaac 42871015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 9854882 - 9854795
Alignment:
Q  256 gaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||||||||||  |  ||||||||||||||||||| |||||||||||||||||||||||||||||||  || ||||||||||    
T  9854882 gaccgttaactttaacccccaa-atgtctatggtggaccaactttaagagtggtccaccatagatcctattaattcttctaatttaaac 9854795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 255
Target Start/End: Original strand, 211594 - 211707
Alignment:
Q  142 gcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgttt 241  Q
    |||||||||||| |||| |||||||  |||||||||||||| ||||||||||||||||||||||||  | | ||||||||||| |  |||| ||||||||    
T  211594 gcttattagatcatttgatcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgttt 211693  T
Q  242 gttaaataaatccc 255  Q
       |||||||||||    
T  211694 accaaataaatccc 211707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 255
Target Start/End: Complemental strand, 240662 - 240549
Alignment:
Q  142 gcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgttt 241  Q
    |||||||||||| |||| |||||||  |||||||||||||| ||||||||||||||||||||||||  | | ||||||||||| |  |||| ||||||||    
T  240662 gcttattagatcatttgatcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgttt 240563  T
Q  242 gttaaataaatccc 255  Q
       |||||||||||    
T  240562 accaaataaatccc 240549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 255
Target Start/End: Original strand, 725217 - 725330
Alignment:
Q  142 gcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgttt 241  Q
    |||||||||||| |||| |||||||  |||||||||||||| ||||||||||||||||||||||||  | | ||||||||||| |  |||| ||||||||    
T  725217 gcttattagatcatttgatcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgttt 725316  T
Q  242 gttaaataaatccc 255  Q
       |||||||||||    
T  725317 accaaataaatccc 725330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 255
Target Start/End: Complemental strand, 794017 - 793904
Alignment:
Q  142 gcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgttt 241  Q
    |||||||||||| |||| |||||||  |||||||||||||| ||||||||||||||||||||||||  | | ||||||||||| |  |||| ||||||||    
T  794017 gcttattagatcatttgatcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgttt 793918  T
Q  242 gttaaataaatccc 255  Q
       |||||||||||    
T  793917 accaaataaatccc 793904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 10669426 - 10669361
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  10669426 atgtctatggtgaaccaaccttaagagtggtccaccatagatcctattaaatattttaatttaaac 10669361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 140 - 253
Target Start/End: Complemental strand, 28420293 - 28420180
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||| ||||||  |||||||||||  ||||||||  |||| |||||||||||| |||||||||||    | |||||||||||||| |||||||||||    
T  28420293 aggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgt 28420194  T
Q  240 ttgttaaataaatc 253  Q
    |||| |||||||||    
T  28420193 ttgtcaaataaatc 28420180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 309
Target Start/End: Original strand, 41629734 - 41629872
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||||||||||||| ||||||||||||||     |||||  |||||||  ||||| ||||||||  |||||||||||||||||||||||     
T  41629734 taatttcaagtttttattttggtctcacaattaataaaacgtatattttgatccctcaagttttcttccgtttgccaaataaatcccgaccgttaacttg 41629833  T
Q  269 aacccaaatgatgtctatggtggaccaaccttaagagtggt 309  Q
    ||| | ||  | |||||||||| ||||||||||| ||||||    
T  41629834 aactccaa--aagtctatggtgaaccaaccttaaaagtggt 41629872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 31845792 - 31845707
Alignment:
Q  260 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    |||||||||||||| ||  |||||||||||| |||||| |||||||||||||||||||| ||||||||||  ||||||| |||||||||    
T  31845792 gttaactttaaccccaa--atgtctatggtgaaccaac-ttaagagtggtccaccataggtcctattaattattttaatgtaaactgtt 31845707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 256 - 348
Target Start/End: Original strand, 43202210 - 43202300
Alignment:
Q  256 gaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    ||||||||| |||||||| ||  || ||||| ||||| |||||||||||||||||||||||||||||||||| |  ||| |||||||||||||    
T  43202210 gaccgttaattttaaccccaa--atatctatagtggatcaaccttaagagtggtccaccatagatcctattagttatttaaatttaaactgtt 43202300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 344
Target Start/End: Complemental strand, 20180671 - 20180590
Alignment:
Q  261 ttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||||| ||  |||||||| |||||| ||| |||||||||||||||||||||||||||||||  |||||||| ||||    
T  20180671 ttaactttaaccctaa--atgtctatagtggactaacattaagagtggtccaccatagatcctattaattattttaattaaaac 20180590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 253
Target Start/End: Original strand, 28418800 - 28418916
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    |||||||||| ||||||  |||||||||||  ||||||||  |||| |||||||||||| |||||||||||    | |||||||||||||  ||||||||    
T  28418800 tttaggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctc 28418899  T
Q  237 cgtttgttaaataaatc 253  Q
    ||||||  |||||||||    
T  28418900 cgtttgccaaataaatc 28418916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 169 - 348
Target Start/End: Complemental strand, 8571707 - 8571528
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccga--ccgttaact 266  Q
    ||||||||  |||| |||||||||  |||||||||||||    | |||| |||| |||| |||| ||||||||   ||||||||||| |  | ||||| |    
T  8571707 taatttcacattttcattttggtcatacaattaataaaacgtacgttttggtccttcatttttttctccgtttaccaaataaatccctagtctgttaagt 8571608  T
Q  267 ttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    ||||||| ||  ||||||||||||||||||| |||| | |||||||||||| | | ||||||  ||||||||||||||||||    
T  8571607 ttaaccccaa--atgtctatggtggaccaactttaaaaatggtccaccatataccttattaaactttttaatttaaactgtt 8571528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 273
Target Start/End: Complemental strand, 6398577 - 6398483
Alignment:
Q  179 tttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactttaaccc 273  Q
    |||| ||||||||| || |||||||||||   || |||||||||||||| ||||||||||||||| |||||||||  ||| ||||| ||||||||    
T  6398577 ttttcattttggtctcataattaataaaacaagcgttttagtccctcattttttcctccgtttgtcaaataaatcatgactgttaagtttaaccc 6398483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 42362732 - 42362671
Alignment:
Q  278 gatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    |||||||||||||||||||| ||||||||||| || |||||||||||||||| ||||||||||    
T  42362732 gatgtctatggtggaccaacattaagagtggttcatcatagatcctattaat-tttttaattt 42362671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 245 - 329
Target Start/End: Complemental strand, 42878845 - 42878761
Alignment:
Q  245 aaataaatcccgaccgttaactttaaccc---aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaat 329  Q
    |||||||||| ||| ||||||||||||||   |||  |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  42878845 aaataaatcctgacagttaactttaaccccccaaa--atgt-tatggtggaccaaccttaagtgtggtccaccatagatcctattaat 42878761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 169 - 344
Target Start/End: Original strand, 22551033 - 22551206
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc-cgaccgttaactt 267  Q
    |||||||| ||||||||||||||||||||||||||||||      |||| |||||||| ||||| |||| ||||  ||||||||||  ||  ||||| ||    
T  22551033 taatttcaagtttttattttggtcccacaattaataaaacgtatcttttggtccctca-ctttttctccatttgccaaataaatcctggattgttaagtt 22551131  T
Q  268 taacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||| ||  || |||||||||||| |||||||| |||| ||||||||| | | ||||||  ||| ||||||||||    
T  22551132 taaccccaa--atctctatggtggacaaaccttaaaagtgatccaccataaaccttattaaattttgtaatttaaac 22551206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 26696546 - 26696643
Alignment:
Q  157 tggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc 254  Q
    ||||||| || ||||||||| ||||| ||||||||||||||||||||||||    |||||| ||||||||  ||||||||| ||||  ||||||||||    
T  26696546 tggtcccctaattaatttcaagttttcattttggtcccacaattaataaaacatacattttggtccctcactttttcctccatttgccaaataaatcc 26696643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 340
Target Start/End: Original strand, 32797136 - 32797336
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    |||||||| ||||  |||||||||||  |||||||| ||||| ||||||||||||||||||||||||    | ||| |||||||||  ||||||||||||    
T  32797136 ggcttatttgatctattggtcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtt 32797235  T
Q  241 tgtta---aataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaa 337  Q
    |   |   |||||||| || ||||||| |||||| | ||  ||||||||| |||| ||||||||| | |||| || | |||| | ||||||| || ||||    
T  32797236 taccaaataataaatcgcggccgttaagtttaactccaa--atgtctatgatggatcaaccttaaaaatggttcatcgtagaccttattaattttgttaa 32797333  T
Q  338 ttt 340  Q
    |||    
T  32797334 ttt 32797336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 348
Target Start/End: Complemental strand, 40437565 - 40437508
Alignment:
Q  291 gaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    |||||||||||| ||||||||||| ||||||||||||||  |||||||||||||||||    
T  40437565 gaccaaccttaaaagtggtccaccgtagatcctattaattattttaatttaaactgtt 40437508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 340
Target Start/End: Original strand, 38696320 - 38696504
Alignment:
Q  155 tttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc 254  Q
    ||||||||| || ||||||| | ||||| ||||||||| || || |||||||| |    |||| ||||||||  ||| |||||||  || ||||||||||    
T  38696320 tttggtcccctaattaattttaagttttcattttggtctcataactaataaaactcatgttttggtccctcaagtttgcctccgtcggtcaaataaatcc 38696419  T
Q  255 cgaccg-ttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    |   |  |||| |||||||| ||  ||||||||||| |||||||||||| ||||||||||||||||||  |||||| ||| ||||||    
T  38696420 cttgctattaagtttaaccctaa--atgtctatggtagaccaaccttaaaagtggtccaccatagatctaattaatttttataattt 38696504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 29103528 - 29103598
Alignment:
Q  184 attttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc 254  Q
    ||||||||||||||||||||||||    ||||| |||||||||| |||||||||| ||| |||||||||||    
T  29103528 attttggtcccacaattaataaaacgtacatttgagtccctcattttttcctccgattgctaaataaatcc 29103598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 14840880 - 14840815
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||||||||||| |||| |||| |||||||||| || ||||||  ||||||||||||||    
T  14840880 atgtctatggtggaccaacattaaaagtgatccaccatagttcttattaaattttttaatttaaac 14840815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 24305160 - 24305232
Alignment:
Q  260 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttt 334  Q
    |||||||||||||| ||  ||||||||||||||||||| ||||||||| || | | |||||||||||||| ||||    
T  24305160 gttaactttaaccctaa--atgtctatggtggaccaacattaagagtgatctatcttagatcctattaatttttt 24305232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 212802 - 212718
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatc 253  Q
    ||||||||  |||| ||||| ||||||||||||| ||||  ||  |||||||||||||  ||||||| ||||||| |||||||||    
T  212802 taatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatc 212718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 239452 - 239536
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatc 253  Q
    ||||||||  |||| ||||| ||||||||||||| ||||  ||  |||||||||||||  ||||||| ||||||| |||||||||    
T  239452 taatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatc 239536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 726425 - 726341
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatc 253  Q
    ||||||||  |||| ||||| ||||||||||||| ||||  ||  |||||||||||||  ||||||| ||||||| |||||||||    
T  726425 taatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatc 726341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 792807 - 792891
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatc 253  Q
    ||||||||  |||| ||||| ||||||||||||| ||||  ||  |||||||||||||  ||||||| ||||||| |||||||||    
T  792807 taatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatc 792891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 798926 - 798842
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatc 253  Q
    ||||||||  |||| ||||| ||||||||||||| ||||  ||  |||||||||||||  ||||||| ||||||| |||||||||    
T  798926 taatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatc 798842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 8570132 - 8570182
Alignment:
Q  157 tggtcccttatttaatttcatgtttttattttggtcccacaattaataaaa 207  Q
    ||||||| || ||||||||| ||||| |||||||||| |||||||||||||    
T  8570132 tggtcccctaattaatttcacgttttcattttggtcctacaattaataaaa 8570182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 17455185 - 17455243
Alignment:
Q  282 tctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    |||||| | |||||| ||||| |||||||||||||||||| |||||||  |||||||||    
T  17455185 tctatgctagaccaatcttaaaagtggtccaccatagatcttattaattattttaattt 17455243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 306 - 344
Target Start/End: Original strand, 37400942 - 37400980
Alignment:
Q  306 tggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  37400942 tggtccaccatagatcctattaatttttttaatataaac 37400980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 273
Target Start/End: Complemental strand, 45437601 - 45437467
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||| ||| || |||| |||| || ||||||||| ||||| |||||| ||||| ||||||||||| |    |||| ||||||| | ||| ||||||     
T  45437601 aggcttaataggtcatttgatcccctaattaatttcaagttttcattttgatcccataattaataaaactcatgttttggtccctcgtgtttgcctccgc 45437502  T
Q  240 ttgttaaataaatccc-gaccgttaactttaaccc 273  Q
    | || ||||||||||| ||| ||||| ||||||||    
T  45437501 tagtcaaataaatccctgactgttaagtttaaccc 45437467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 340
Target Start/End: Original strand, 30786753 - 30786873
Alignment:
Q  220 tccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt--aacccaaatgatgtctatggtggaccaaccttaagagtggtccaccata 317  Q
    |||||||  |||| |||||||||  |||||||| ||||| |||||||||  ||| | ||  |||||||||||||| |||| |||| ||||||||| ||||    
T  30786753 tccctcacttttttctccgtttgccaaataaattccgactgttaactttttaactctaa--atgtctatggtggatcaactttaaaagtggtccatcata 30786850  T
Q  318 gatcctattaatatttttaattt 340  Q
     | | ||||||| || |||||||    
T  30786851 aaccttattaattttgttaattt 30786873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 38697126 - 38697058
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaa 207  Q
    |||||||| ||| || |||||||||| | ||||||||  ||||| |||||||||||| || ||||||||    
T  38697126 taggcttaatagctcatttggtccctcaattaatttccagttttcattttggtcccataactaataaaa 38697058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 3e-62; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 139 - 348
Target Start/End: Complemental strand, 5187742 - 5187533
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||| ||| | |||||  ||||    
T  5187742 taggcttattagattgtttggtcccttatttaatttcatgttttcattttggtcccataattaataaaaatggcgttttagttccttacctttttgtccg 5187643  T
Q  239 tttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 338  Q
    ||||  |||||||||| ||| ||||| ||||||||||||| ||||||| ||||||||||||||| |||||| |||||||||||||||||||  | |||||    
T  5187642 tttgccaaataaatcctgacggttaagtttaacccaaatgttgtctatagtggaccaaccttaaaagtggttcaccatagatcctattaattatattaat 5187543  T
Q  339 ttaaactgtt 348  Q
    || |||||||    
T  5187542 ttcaactgtt 5187533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 141 - 340
Target Start/End: Original strand, 17837614 - 17837813
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  17837614 ggcttattagatcgtttggtcccttatttaatttattgttttcattttggttccacaattaataaaaatggcgttttagtccctcatcttttcttccgtt 17837713  T
Q  241 tgttaaataaatcccgaccgttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatt 339  Q
    |   |||||||| || || ||||| ||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||  ||||||||    
T  17837714 taccaaataaat-ccaacagttaagtttaaccccaaatgatgtctatggtggacaaacattaagagtggtccaccatagatcctattaattattttaatt 17837812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 137 - 340
Target Start/End: Original strand, 23392208 - 23392411
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  23392208 tttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctc 23392307  T
Q  237 cgtttgttaaataaatcccgaccgttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatattttt 335  Q
    ||||||  ||||||||||  |  ||||| ||||| ||||||||||| ||| |||||| ||||||||| ||||||||||||||||||||||||||  ||||    
T  23392308 cgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttt 23392406  T
Q  336 aattt 340  Q
    |||||    
T  23392407 aattt 23392411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 139 - 340
Target Start/End: Complemental strand, 29381850 - 29381649
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    ||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||||||||||||||||| | ||||||||| |||||||||||||||    
T  29381850 taggcttattagatcgtttggtcccttatttaatttcttattttcattttgatcccacaattaataaaaatgacgttttagtccttcatcttttcctccg 29381751  T
Q  239 tttgttaaataaatcccgaccgttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaa 337  Q
    |||   |||||||| || || ||||| ||||| |||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||  ||||||    
T  29381750 tttaccaaataaat-ccaacagttaagtttaaccccaaatgatgtctgtggtggacaaaccttaagagtgatccaccatagatcctattaattattttaa 29381652  T
Q  338 ttt 340  Q
    |||    
T  29381651 ttt 29381649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 140 - 340
Target Start/End: Complemental strand, 23397473 - 23397275
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  23397473 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgt 23397374  T
Q  240 ttgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatt 339  Q
    |||  |||||||||||||||||||| ||||||   ||  |||||||||||||||||||||||| ||| ||||||| || | | ||||||| || ||||||    
T  23397373 ttgccaaataaatcccgaccgttaaatttaacttcaa--atgtctatggtggaccaaccttaaaagtagtccaccgtataccttattaattttgttaatt 23397276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 17839259 - 17839127
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  17839259 taggcttattagatcgtttggtcccttatttaatttcttgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccg 17839160  T
Q  239 tttgttaaataaatcccgaccgttaactttaac 271  Q
    ||||  |||||||||||||||||||| ||||||    
T  17839159 tttgccaaataaatcccgaccgttaattttaac 17839127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 140 - 344
Target Start/End: Complemental strand, 18346869 - 18346665
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||  |||||||  |||  ||| ||    
T  18346869 aggcttattagatcatttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggcgttttgatccctcacgtttgtctctgt 18346770  T
Q  240 ttgttaaataaatcccgaccgttaactttaacc-caaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 338  Q
    |||  |||||||| ||||| ||||| ||||||| |||||||||| || |||| |||||||||||||||||||||| ||| |||||||||||  |||||||    
T  18346769 ttgccaaataaat-ccgactgttaattttaacctcaaatgatgtttacggtgaaccaaccttaagagtggtccactataaatcctattaattattttaat 18346671  T
Q  339 ttaaac 344  Q
    ||||||    
T  18346670 ttaaac 18346665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 141 - 340
Target Start/End: Original strand, 29380189 - 29380386
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||||| |||||| ||||||    
T  29380189 ggcttattagatcatttggtcccttatttaatttcttgttttcattttggtcccacaattaacaaaaatggcgttttagtccctcaccttttcttccgtt 29380288  T
Q  241 tgttaaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    ||  |||||||||||||||||||| ||||||   ||  |||| ||||||||| ||||||||| ||| ||||| | |||| | ||||||| || |||||||    
T  29380289 tgccaaataaatcccgaccgttaattttaacttcaa--atgtatatggtggatcaaccttaaaagtagtccatcgtagaccttattaattttgttaattt 29380386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 137 - 271
Target Start/End: Original strand, 5186562 - 5186696
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||| |||||||||||||| || | ||||| ||| |||||||||||||    
T  5186562 tttaggcttattagatcatttgatcccttatttaatttcatgttttcattttggtcacacaattaataaaagtgacgttttaatccatcatcttttcctc 5186661  T
Q  237 cgtttgttaaataaatcccgaccgttaactttaac 271  Q
    ||||||  |||||||||||||||||||||||||||    
T  5186662 cgtttgccaaataaatcccgaccgttaactttaac 5186696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 141 - 253
Target Start/End: Original strand, 6701378 - 6701490
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||    
T  6701378 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggtattttagtccctcacattttcctccgtt 6701477  T
Q  241 tgttaaataaatc 253  Q
    ||  |||||||||    
T  6701478 tgccaaataaatc 6701490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 139 - 317
Target Start/End: Complemental strand, 32507146 - 32506969
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||||||| |||||||| |||||||||||||||||||| |||||| ||||||| |||||||||||||  |||||||||||||  |||| ||| |    
T  32507146 taggcttattagattgtttggtcacttatttaatttcatgttttcattttgatcccacatttaataaaaatggtgttttagtccctcacatttttctcag 32507047  T
Q  239 tttgttaaataaatcc-cgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccata 317  Q
    ||||  ||||||||||  ||| ||||| |||||||| ||  || ||||||||||||||||||||||||||||| ||||||    
T  32507046 tttgccaaataaatccttgactgttaagtttaaccccaa--atatctatggtggaccaaccttaagagtggtctaccata 32506969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 139 - 254
Target Start/End: Complemental strand, 2688044 - 2687929
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||  ||||    
T  2688044 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaaatggcgttttagtccctcacctttttatccg 2687945  T
Q  239 tttgttaaataaatcc 254  Q
    ||||  ||||||||||    
T  2687944 tttgccaaataaatcc 2687929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 6702988 - 6702859
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| |||||||  ||||||||||||    
T  6702988 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggcgtttta-tccctcacgttttcctccgtt 6702890  T
Q  241 tgttaaataaatcccgaccgttaactttaac 271  Q
    ||  |||||||||| ||| ||||| ||||||    
T  6702889 tgccaaataaatcctgactgttaagtttaac 6702859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 144 - 297
Target Start/End: Original strand, 29722664 - 29722815
Alignment:
Q  144 ttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgt 243  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||| |||||||||||||  ||||||||| |||      
T  29722664 ttattagatcatttggtcccttatttaatttcatgttttcattttgatcccataattaataaaaatggcgttttagtccctcacattttcctccattttg 29722763  T
Q  244 taaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaac 297  Q
     ||||||||| | || ||||| ||||| |||||  |||| ||| ||||||||||    
T  29722764 caaataaatctcaactgttaaatttaatccaaa--atgtatattgtggaccaac 29722815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 2687242 - 2687342
Alignment:
Q  155 tttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc 254  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||| |||  ||||||||||||||  ||||||||||    
T  2687242 tttggtcccttatttaatttcatgttttcattttgatcccacaattaataaaaatggcgttttagtccttcacattttcctccgtttgccaaataaatcc 2687341  T
Q  255 c 255  Q
    |    
T  2687342 c 2687342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 12256704 - 12256612
Alignment:
Q  139 taggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttt 231  Q
    |||||||||||||| |||||||||||||||||||||||||||||  |||||||| |||||||||||||||| || ||||||||||||| ||||    
T  12256704 taggcttattagattgtttggtcccttatttaatttcatgttttcgttttggtcgcacaattaataaaaatagcgttttagtccctcaccttt 12256612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 179 - 345
Target Start/End: Original strand, 12669759 - 12669924
Alignment:
Q  179 tttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgacc-gttaactttaacccaaat 277  Q
    |||||||||||||| |||||||||||||| |    ||||||||| |||  |||||||||||||| |||||||||| | | | |||||||||||||  ||     
T  12669759 tttttattttggtctcacaattaataaaactcaagttttagtccgtcactttttcctccgtttgctaaataaatctctaactgttaactttaacctcaa- 12669857  T
Q  278 gatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaact 345  Q
     |||| |||||||||||||||||||||||||||||||||||||| ||||| | || ||||| ||||||    
T  12669858 -atgtgtatggtggaccaaccttaagagtggtccaccatagatcatattatttttattaatataaact 12669924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 344
Target Start/End: Complemental strand, 7311739 - 7311640
Alignment:
Q  245 aaataaatcccgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||  || ||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  7311739 aaataaatcctcacagttaagtttaatccaaatgatgtctatggtgaaccaaccttaagagtggtccaccataaatcctattaattattttaatttaaac 7311640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 140 - 317
Target Start/End: Complemental strand, 6452630 - 6452453
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||| ||||  |||||||| ||  |||||||| ||||| |||||||||||| |||||||||||    | ||| |||||||||| |||||||||||    
T  6452630 aggcttatttgatccattggtcccctaaataatttcaagttttcattttggtcccataattaataaaacgtacgtttgagtccctcattttttcctccgt 6452531  T
Q  240 ttgttaaataaatcc-cgaccgtt-aactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccata 317  Q
    |||  ||||||||||  ||||||| || |||||||||||  || ||||| ||| | |||| |||||||||||||||||||    
T  6452530 ttgccaaataaatccttgaccgttaaagtttaacccaaa--atatctatagtgtatcaactttaagagtggtccaccata 6452453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 12256557 - 12256614
Alignment:
Q  149 agatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaa 206  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  12256557 agatcgtttggtcccttatttaatttcatatttttattttggtcctaaaattaataaa 12256614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 348
Target Start/End: Original strand, 11967331 - 11967420
Alignment:
Q  257 accgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtt 348  Q
    ||||||||||||||||  ||  |||||||| ||||||||||||| |||| |||||| |||||||| |||||||  |||||||||||||||||    
T  11967331 accgttaactttaacctcaa--atgtctattgtggaccaaccttgagaggggtccatcatagatcatattaattattttaatttaaactgtt 11967420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 232174 - 232303
Alignment:
Q  141 ggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtt 240  Q
    |||||| ||||||  |||||||||||  ||||||||  |||| |||||||||||| |||||||||||    | |||||||||||||  ||||||||||||    
T  232174 ggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaa--cacgttttagtccctcactttttcctccgtt 232271  T
Q  241 tgttaaataaatccc-gaccgttaactttaac 271  Q
    ||  |||||||||||  || ||||||||||||    
T  232272 tgccaaataaatcccaaactgttaactttaac 232303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 11722921 - 11722986
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||||||||||| || |||| | ||||||||||||||||||||||||  || ||||||||||    
T  11722921 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaac 11722986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 15730149 - 15730036
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaata-aaaatggcattttagtccctcatcttttcctccg 238  Q
    |||||||||||||   ||||||||| | ||||||||   |||| ||||||||||||||||||||| ||||   |||||| ||||||||  ||||| ||||    
T  15730149 aggcttattagattcattggtccctcaattaatttccatttttcattttggtcccacaattaataaaaaaatacattttggtccctcactttttcttccg 15730050  T
Q  239 tttgttaaataaat 252  Q
    |||| |||||||||    
T  15730049 tttgctaaataaat 15730036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 140 - 233
Target Start/End: Complemental strand, 233683 - 233590
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttc 233  Q
    ||||||| ||||||  ||||||| |||  ||||||||  |||| |||||||||||| ||||||||||||   | |||||||||||||| |||||    
T  233683 aggcttaatagatcaattggtcctttaaataatttcaatttttcattttggtcccataattaataaaaaacacgttttagtccctcattttttc 233590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 107 - 140
Target Start/End: Original strand, 24327411 - 24327444
Alignment:
Q  107 ccgaaccaaattccaaagtttccttaaaacttta 140  Q
    ||||||||||||||||||||||||||||||||||    
T  24327411 ccgaaccaaattccaaagtttccttaaaacttta 24327444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 34024154 - 34024073
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataa 250  Q
    ||||||||  |||| ||||||||||||||||||||||||    ||||||  |||||||  ||||||||||||||| ||||||    
T  34024154 taatttcaaattttcattttggtcccacaattaataaaatgtacattttgatccctcactttttcctccgtttgtcaaataa 34024073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 6452310 - 6452402
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgt 261  Q
    |||||||| |||||  ||||||||| | |||||||||||    | |||||||||||||  ||||||||||||||  |||||||||| ||||||    
T  6452310 taatttcaagttttcgttttggtcctataattaataaaaggtacgttttagtccctcactttttcctccgtttgccaaataaatcctgaccgt 6452402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 253
Target Start/End: Original strand, 27080941 - 27081034
Alignment:
Q  160 tcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatc 253  Q
    |||||||  |||||||  ||||| |||||||||  ||||||||||||| |  ||||| |||||||||  |||| |||||||||  |||||||||    
T  27080941 tcccttaaataatttcgagttttcattttggtcttacaattaataaaatttacatttaagtccctcacttttttctccgtttgcgaaataaatc 27081034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 101; Significance: 9e-50; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 137 - 348
Target Start/End: Complemental strand, 54307 - 54095
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    |||||||||||| ||||  ||||||||| |  |||||||| ||||| ||||||||| ||||||||||||||   || |||| ||||||||  ||||||||    
T  54307 tttaggcttatttgatccattggtccctcaaataatttcaagttttaattttggtcgcacaattaataaaacgtgcgttttggtccctcaaattttcctc 54208  T
Q  237 cgtttgttaaataaatcccgaccgttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatattttt 335  Q
    ||||||  |||||||||  ||| ||||| | |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||    
T  54207 cgtttgccaaataaatcgtgactgttaagtataaccccaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaattatttt 54108  T
Q  336 aatttaaactgtt 348  Q
    |||||||||||||    
T  54107 aatttaaactgtt 54095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 168 - 302
Target Start/End: Original strand, 52617 - 52749
Alignment:
Q  168 ttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaactt 267  Q
    ||||||||| ||||| |||||| |||||||||||||||||    | |||| ||||||||  |||| |||||||||  |||||||||||||| ||||||||    
T  52617 ttaatttcaagttttcattttgatcccacaattaataaaatgtacgttttggtccctcagatttttctccgtttgccaaataaatcccgacagttaactt 52716  T
Q  268 taacccaaatgatgtctatggtggaccaaccttaa 302  Q
    ||||   ||  |||| |||||||||||||||||||    
T  52717 taactttaa--atgtatatggtggaccaaccttaa 52749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 156 - 344
Target Start/End: Complemental strand, 43678 - 43489
Alignment:
Q  156 ttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatccc 255  Q
    ||||||||| |  |||||| | |||||||||||||||||| |||||||||||      ||| |||||||||  ||||||||||||||  |||||| |||     
T  43678 ttggtccctcaaataattttaagtttttattttggtcccataattaataaaacgtatgtttaagtccctcactttttcctccgtttgccaaataagtcct 43579  T
Q  256 gaccgttaactttaacccaaa-tgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||| ||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  43578 gacggttaagtttaaccccaagtgatgtctatggtggaccaatcttaagagtggtccaccatagatcctattaattattttaatttaaac 43489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 138 - 344
Target Start/End: Original strand, 127428 - 127633
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc 237  Q
    ||||||||| ||| || ||||||||| || ||||||||| |||||  ||||||||||| || |||||||| |    |||| ||||||||| ||| |||||    
T  127428 ttaggcttaataggtcatttggtcccctaattaatttcaagttttcgttttggtcccataactaataaaactcatgttttggtccctcatgtttgcctcc 127527  T
Q  238 gtttgttaaataaatccc-gaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatattttta 336  Q
    ||  || ||||||||||| ||| |||||||||||||  ||  |||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||    
T  127528 gtcggtcaaataaatccctgacagttaactttaacctcaa--atgtctatggtgaaacaaccttaagagtggtccaccatagatcctattaatgttttta 127625  T
Q  337 atttaaac 344  Q
    ||||||||    
T  127626 atttaaac 127633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 76; Significance: 7e-35; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 169 - 343
Target Start/End: Original strand, 123995 - 124166
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    |||||||| ||||| ||||||||||||||||||||||||    |||||| ||||||||  |||||||| |||||  ||||||||||  || ||||| |||    
T  123995 taatttcaagttttcattttggtcccacaattaataaaacgtacattttggtccctcactttttcctctgtttgccaaataaatccttacggttaagttt 124094  T
Q  269 aacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaa 343  Q
    ||||| ||  || |||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  124095 aaccccaa--atatctatggtggaccaaccttaagagtggtccaccatagatcgtattaa-attgttaatttaaa 124166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 169 - 344
Target Start/End: Complemental strand, 125323 - 125146
Alignment:
Q  169 taatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccgaccgttaacttt 268  Q
    ||||||||  |||| ||||||||||||||||||||||||    | |||| ||||||||  ||||||||||||||  ||||||||||  || ||||| |||    
T  125323 taatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatcctaacggttaagttt 125224  T
Q  269 aaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctatt-aatatttttaatttaaac 344  Q
    ||||| ||||||||| |||| |||||||||||||| |||||||||||||||| | |||| ||| ||||||||||||||    
T  125223 aaccccaaatgatgtatatgatggaccaaccttaaaagtggtccaccatagaccttattaaatttttttaatttaaac 125146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 138 - 253
Target Start/End: Original strand, 61846 - 61961
Alignment:
Q  138 ttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctcc 237  Q
    |||||||||||||| ||||||||||| ||  |||||||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||| |||    
T  61846 ttaggcttattagaacgtttggtcccctaaataatttcatgttttcattttggtctcataattaataaaaatggcgttttagtccctcatcttttcttcc 61945  T
Q  238 gtttgttaaataaatc 253  Q
    |||||  |||||||||    
T  61946 gtttgccaaataaatc 61961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 137 - 317
Target Start/End: Complemental strand, 63253 - 63074
Alignment:
Q  137 tttaggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctc 236  Q
    |||||| |||||||||||||||||||   |  ||||||| |||||| ||||||||||||||||||||||| ||||| |||||||||||||  |||| |||    
T  63253 tttaggtttattagatcgtttggtcctccaaataatttcgtgttttcattttggtcccacaattaataaagatggcgttttagtccctcacatttttctc 63154  T
Q  237 cgtttgttaaataaatccc-gaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccata 317  Q
    ||||||  ||||||||||| ||| ||||| ||||||   ||  ||||||||| |||| ||| ||||||| ||||||||||||    
T  63153 cgtttgccaaataaatccctgactgttaagtttaacttcaa--atgtctatgatggatcaatcttaagaatggtccaccata 63074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 144 - 273
Target Start/End: Complemental strand, 858 - 731
Alignment:
Q  144 ttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgt 243  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| |||  |  ||||||||||||||     
T  858 ttattagatcgtttggtcctttatttaatttcatgtttttattttggtccctcaattaataaaaatggcgttatagaccccaa--ttttcctccgtttgc 761  T
Q  244 taaataaatcccgaccgttaactttaaccc 273  Q
     | |||||||| ||| ||||||||||||||    
T  760 catataaatcctgactgttaactttaaccc 731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 140 - 310
Target Start/End: Complemental strand, 2594 - 2426
Alignment:
Q  140 aggcttattagatcgtttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgt 239  Q
    ||||||||||||||  ||||||||| | ||||||||   |||| |||||||||||||||||||||||||   | |||| |||||| |  |||||||| ||    
T  2594 aggcttattagatcaattggtccctcaattaatttcca-ttttcattttggtcccacaattaataaaaagtaccttttggtcccttagtttttcctctgt 2496  T
Q  240 ttgttaaataaatcccgaccgttaactttaac-ccaaatgatgtctatggtggaccaaccttaagagtggtc 310  Q
    ||   |||||||| ||||| |||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  2495 tttccaaataaattccgactgttaactttaactccaaat-atgt-aatggtggaccaaccttaaaagtggtc 2426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 108590 - 108714
Alignment:
Q  220 tccctcatcttttcctccgtttgttaaataaatcccgaccgttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatag 318  Q
    |||||||| ||||||||| ||||  ||||||||||   | ||||| |||||||| |||| || | ||||||||||||||||||| |||||||||||||||    
T  108590 tccctcattttttcctccatttgccaaataaatccttgcagttaagtttaaccccaaataatat-tatggtggaccaaccttaaaagtggtccaccatag 108688  T
Q  319 atcctattaatatttttaatttaaac 344  Q
    || ||||||||  || ||||||||||    
T  108689 atgctattaattattataatttaaac 108714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 157 - 340
Target Start/End: Complemental strand, 109847 - 109666
Alignment:
Q  157 tggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcccg 256  Q
    ||||||||||  |||||||| ||||| |||||||||| |||||||||||||    |||||||||||||||  |||| |||  ||||  |||| ||||||     
T  109847 tggtcccttaaataatttcaagttttcattttggtcctacaattaataaaacgtacattttagtccctcacttttttctcaatttgccaaatgaatccca 109748  T
Q  257 accgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 340  Q
    ||  |||||||||||   ||  |||| ||||||||||||||||||| | | ||||| | |||| | ||||||| || |||||||    
T  109747 actattaactttaacttcaa--atgtatatggtggaccaaccttaaaaatagtccatcgtagaccttattaattttgttaattt 109666  T

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Target: scaffold0013 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 155 - 327
Target Start/End: Original strand, 32584 - 32753
Alignment:
Q  155 tttggtcccttatttaatttcatgtttttattttggtcccacaattaataaaaatggcattttagtccctcatcttttcctccgtttgttaaataaatcc 254  Q
    ||||||||| || ||||||||| ||||||||||||||| || || |||||||| | |  |||| || || ||| |||  |||| |  |  ||||||||||    
T  32584 tttggtcccgtaattaatttcaagtttttattttggtcacataactaataaaactcgtgttttggtgcc-catgtttgtctccatcggccaaataaatcc 32682  T
Q  255 cgaccgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctatta 327  Q
      || |||||||||||||  ||  ||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  32683 taactgttaactttaaccttaa--atgtctatggtggaccaaccttaggagtggtccatcatagatcctatta 32753  T

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Target: scaffold2071 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 652 - 597
Alignment:
Q  289 tggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    ||||||||||||||||||||||||||||||| | ||||||  ||||||||||||||    
T  652 tggaccaaccttaagagtggtccaccatagaccttattaaattttttaatttaaac 597  T

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Target: scaffold0219 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 344
Target Start/End: Complemental strand, 8191 - 8107
Alignment:
Q  257 accgttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||||||| |||||||| ||  |||||||||||||| |||||||||||| |||||| |||||||  |||||||  |||||||||||||    
T  8191 accgttaattttaaccccaa--atgtctatggtggatcaaccttaagag-ggtccatcatagattatattaattattttaatttaaac 8107  T

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Target: scaffold0201 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 21262 - 21302
Alignment:
Q  279 atgtctatggtggaccaaccttaagagtggtccaccataga 319  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  21262 atgtctatggtggaccaaccttcagagtggtccaccataga 21302  T

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Target: scaffold0128 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 344
Target Start/End: Original strand, 22099 - 22180
Alignment:
Q  261 ttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaac 344  Q
    |||| |||||||||||  ||| ||||||||||||||| ||    ||||||||||||||| ||||||||| | ||||||||||||    
T  22099 ttaagtttaacccaaa--atgcctatggtggaccaacattgtaggtggtccaccatagaccctattaatttctttaatttaaac 22180  T

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