View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9632_low_7 (Length: 302)
Name: NF9632_low_7
Description: NF9632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9632_low_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 31 - 302
Target Start/End: Complemental strand, 41653692 - 41653421
Alignment:
| Q |
31 |
tgacataccatagctgtcctttgcaacagccaagctaatgattttcccaaaagaggaaaacttttcacgcagaagtgtttctgaaatatctaagtccaaa |
130 |
Q |
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| T |
41653692 |
tgacataccattgctgtcctttgcaacagccaagctaatgattttcccaaaagaggaaaacttttcacgcagaagtgtttctgaaatatctaagtccaaa |
41653593 |
T |
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| Q |
131 |
ttcttcatgtacaagtttgtatatctagtatccgggccagacgatatgcggtcacttttcttgacaaactttccaacatatctgggacaagaattaaaat |
230 |
Q |
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| T |
41653592 |
ttcttcatgtacaagtttgtatatctagtatccgggccagacgatatgcggtcacttttcttgacaaactttccaacatatctgggacaagaattaaaac |
41653493 |
T |
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| Q |
231 |
caatctcatgaaatataagaattcagccaatctacataaattaactttagagccaccaaagaatcatagaat |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
41653492 |
caatctcatgaaatataagaattcagccaatctacataaattaactttagagccgccaaagaatcatagaat |
41653421 |
T |
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