View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9638_low_2 (Length: 338)
Name: NF9638_low_2
Description: NF9638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9638_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 8 - 324
Target Start/End: Original strand, 34260394 - 34260711
Alignment:
| Q |
8 |
gaagcaaaggcactcattagattaggcgtgttcggtgtc-gaccccgacacataagtgtaattacctgcaactttaattgatccatggacttctgagctg |
106 |
Q |
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| T |
34260394 |
gaagcatagacactcattagattaggcgtgtccggtgtccgaccccgacacataagtgtaattacctgcaactttaattgatccatggacttgtgagctg |
34260493 |
T |
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| Q |
107 |
attcatgtttgagtggagatttctttaaaggagtgatgagtttagatattttcttcactggagactgtttatctttcaaaaagttactaaacaatagatt |
206 |
Q |
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| T |
34260494 |
attcatgtttgagtggagatttctttaaaggagtgatgagtttagatattttcttcactggagactgtttatctttcaaaaagttactaaacaatagatt |
34260593 |
T |
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| Q |
207 |
ctcttttcctcttccttcttcttgtatagatgagaatgaatcttgttttctatgcaattgcttcccattactcccactgtgattagtgacagtgtcagga |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
34260594 |
ctcttttcctcttccttcttcttgtatagatgagaatgaatcttgttttctatgcaattgcttcccattactcccaccgtgattagtgacagtgtcagga |
34260693 |
T |
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| Q |
307 |
gaaaataatagctttctg |
324 |
Q |
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|||||||||||||||||| |
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| T |
34260694 |
gaaaataatagctttctg |
34260711 |
T |
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