View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9639_low_20 (Length: 254)

Name: NF9639_low_20
Description: NF9639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9639_low_20
NF9639_low_20
[»] chr1 (33 HSPs)
chr1 (18-244)||(9830452-9830679)
chr1 (40-104)||(51589819-51589883)
chr1 (40-147)||(17452686-17452789)
chr1 (40-113)||(4112547-4112620)
chr1 (40-150)||(17452835-17452941)
chr1 (40-150)||(35772235-35772341)
chr1 (40-150)||(42586446-42586551)
chr1 (40-96)||(25145492-25145548)
chr1 (40-149)||(40079124-40079229)
chr1 (53-146)||(52961557-52961646)
chr1 (30-150)||(2859389-2859505)
chr1 (40-156)||(4113013-4113124)
chr1 (43-151)||(31181523-31181627)
chr1 (40-93)||(27413371-27413424)
chr1 (30-95)||(27413604-27413669)
chr1 (43-104)||(51589005-51589066)
chr1 (40-150)||(38733353-38733459)
chr1 (40-104)||(51589239-51589303)
chr1 (54-97)||(5953497-5953540)
chr1 (124-155)||(17468310-17468341)
chr1 (121-155)||(21626423-21626457)
chr1 (43-150)||(25137313-25137416)
chr1 (51-104)||(3170014-3170067)
chr1 (43-104)||(5953206-5953267)
chr1 (40-93)||(40316057-40316110)
chr1 (44-92)||(2859638-2859686)
chr1 (40-96)||(3169787-3169843)
chr1 (40-104)||(9499259-9499322)
chr1 (40-96)||(31432237-31432293)
chr1 (40-80)||(31496378-31496418)
chr1 (40-96)||(33156754-33156810)
chr1 (40-96)||(35772050-35772106)
chr1 (40-96)||(52907405-52907461)
[»] chr7 (35 HSPs)
chr7 (40-155)||(11211686-11211796)
chr7 (44-95)||(42985134-42985185)
chr7 (44-94)||(26028972-26029022)
chr7 (40-150)||(36277233-36277339)
chr7 (40-150)||(48661562-48661668)
chr7 (44-96)||(23796034-23796086)
chr7 (43-150)||(1596799-1596902)
chr7 (31-113)||(22574840-22574921)
chr7 (44-150)||(3038095-3038197)
chr7 (40-150)||(17202150-17202256)
chr7 (43-150)||(21054963-21055066)
chr7 (40-113)||(25620140-25620213)
chr7 (40-150)||(29469576-29469682)
chr7 (43-104)||(40746278-40746339)
chr7 (40-113)||(48243068-48243141)
chr7 (43-91)||(24432148-24432196)
chr7 (40-96)||(34027414-34027470)
chr7 (40-95)||(6782883-6782938)
chr7 (40-95)||(36206070-36206125)
chr7 (40-94)||(4506955-4507009)
chr7 (43-150)||(21861265-21861368)
chr7 (43-113)||(21861533-21861603)
chr7 (43-150)||(47710414-47710517)
chr7 (43-150)||(47722070-47722173)
chr7 (43-96)||(21822064-21822117)
chr7 (40-150)||(29469811-29469917)
chr7 (40-150)||(33996318-33996424)
chr7 (43-92)||(40991754-40991803)
chr7 (44-113)||(48243448-48243517)
chr7 (40-96)||(2544454-2544510)
chr7 (40-96)||(4886350-4886406)
chr7 (40-104)||(10903098-10903162)
chr7 (52-92)||(21311415-21311455)
chr7 (40-96)||(31257038-31257094)
chr7 (53-113)||(31485679-31485739)
[»] chr6 (25 HSPs)
chr6 (31-150)||(9705225-9705340)
chr6 (40-150)||(12329951-12330057)
chr6 (40-96)||(21690743-21690799)
chr6 (31-150)||(6054374-6054489)
chr6 (40-150)||(4868584-4868690)
chr6 (40-150)||(6542950-6543056)
chr6 (40-150)||(12330298-12330403)
chr6 (40-150)||(25065101-25065207)
chr6 (43-150)||(33494510-33494613)
chr6 (40-113)||(4868820-4868893)
chr6 (40-113)||(12330186-12330259)
chr6 (40-155)||(30256779-30256889)
chr6 (41-150)||(6237715-6237815)
chr6 (40-96)||(8026410-8026466)
chr6 (40-96)||(8026625-8026681)
chr6 (51-113)||(4906810-4906872)
chr6 (43-150)||(13353172-13353275)
chr6 (43-150)||(33796297-33796400)
chr6 (40-96)||(7915872-7915926)
chr6 (47-96)||(20830771-20830820)
chr6 (53-113)||(5648692-5648752)
chr6 (40-96)||(11721926-11721982)
chr6 (53-150)||(17147680-17147773)
chr6 (40-104)||(20373584-20373647)
chr6 (40-96)||(30256599-30256655)
[»] chr3 (25 HSPs)
chr3 (40-150)||(54368487-54368593)
chr3 (40-155)||(45138978-45139089)
chr3 (40-150)||(20327621-20327727)
chr3 (40-150)||(35038201-35038307)
chr3 (31-155)||(45138800-45138920)
chr3 (43-150)||(38791460-38791563)
chr3 (40-150)||(16926956-16927062)
chr3 (40-150)||(20303071-20303177)
chr3 (43-149)||(22729072-22729174)
chr3 (40-96)||(1723083-1723139)
chr3 (40-96)||(11589806-11589862)
chr3 (40-96)||(31317249-31317305)
chr3 (41-150)||(35038436-35038541)
chr3 (40-95)||(24866219-24866274)
chr3 (53-96)||(45828040-45828083)
chr3 (30-96)||(34610582-34610648)
chr3 (43-92)||(13741111-13741160)
chr3 (40-150)||(16239562-16239668)
chr3 (44-150)||(20327860-20327962)
chr3 (40-113)||(54567896-54567969)
chr3 (40-96)||(4155345-4155401)
chr3 (40-92)||(6487340-6487392)
chr3 (40-100)||(33205482-33205542)
chr3 (40-96)||(50052546-50052602)
chr3 (51-156)||(50930667-50930768)
[»] scaffold0766 (1 HSPs)
scaffold0766 (30-150)||(6245-6361)
[»] chr8 (39 HSPs)
chr8 (53-156)||(38447447-38447546)
chr8 (40-153)||(22638186-22638295)
chr8 (40-150)||(15042677-15042783)
chr8 (40-150)||(17469789-17469895)
chr8 (40-150)||(17477036-17477142)
chr8 (44-150)||(24532432-24532534)
chr8 (40-150)||(39052936-39053042)
chr8 (40-150)||(39743500-39743606)
chr8 (40-96)||(20702818-20702874)
chr8 (30-150)||(39960162-39960279)
chr8 (30-150)||(10449971-10450087)
chr8 (44-155)||(8716080-8716187)
chr8 (40-94)||(34843140-34843194)
chr8 (36-93)||(4828092-4828149)
chr8 (43-149)||(5590378-5590480)
chr8 (43-96)||(18939307-18939360)
chr8 (40-150)||(19256593-19256699)
chr8 (40-150)||(28069364-28069470)
chr8 (40-93)||(29005888-29005941)
chr8 (40-97)||(42846612-42846669)
chr8 (40-96)||(24075313-24075369)
chr8 (123-155)||(30201610-30201642)
chr8 (43-155)||(4828259-4828367)
chr8 (40-153)||(37001194-37001303)
chr8 (43-150)||(11232204-11232307)
chr8 (43-96)||(3157569-3157622)
chr8 (123-156)||(8466810-8466843)
chr8 (40-113)||(12688076-12688149)
chr8 (40-150)||(19256827-19256933)
chr8 (40-113)||(20301265-20301338)
chr8 (40-113)||(21087897-21087970)
chr8 (31-96)||(27205181-27205246)
chr8 (126-155)||(29907815-29907844)
chr8 (40-113)||(35682788-35682861)
chr8 (40-92)||(10614946-10614998)
chr8 (40-96)||(10884086-10884141)
chr8 (40-88)||(15686047-15686095)
chr8 (40-96)||(27204985-27205041)
chr8 (40-96)||(27205083-27205139)
[»] chr5 (34 HSPs)
chr5 (43-150)||(24346511-24346614)
chr5 (40-156)||(1564574-1564686)
chr5 (30-150)||(41666754-41666870)
chr5 (44-155)||(15438843-15438950)
chr5 (43-150)||(24269881-24269983)
chr5 (40-155)||(28510057-28510168)
chr5 (40-150)||(24346744-24346850)
chr5 (40-150)||(41667000-41667106)
chr5 (40-104)||(27133000-27133064)
chr5 (40-83)||(9187320-9187363)
chr5 (43-150)||(17352445-17352547)
chr5 (40-113)||(24531603-24531676)
chr5 (43-155)||(7369690-7369798)
chr5 (44-104)||(17015890-17015950)
chr5 (40-96)||(19522341-19522397)
chr5 (40-96)||(25258101-25258157)
chr5 (40-96)||(25258308-25258364)
chr5 (40-96)||(25321891-25321947)
chr5 (40-96)||(25322098-25322154)
chr5 (53-104)||(38731623-38731674)
chr5 (51-113)||(6413444-6413506)
chr5 (44-150)||(8081124-8081227)
chr5 (43-150)||(9368801-9368904)
chr5 (43-150)||(18333475-18333578)
chr5 (43-93)||(38731848-38731898)
chr5 (40-93)||(20225065-20225118)
chr5 (40-113)||(21306891-21306964)
chr5 (40-113)||(21314729-21314802)
chr5 (44-113)||(24528544-24528613)
chr5 (40-97)||(43117902-43117959)
chr5 (40-96)||(8098338-8098394)
chr5 (40-96)||(19522108-19522164)
chr5 (40-92)||(24487652-24487704)
chr5 (40-96)||(33337462-33337518)
[»] chr4 (33 HSPs)
chr4 (52-155)||(44118878-44118977)
chr4 (40-150)||(35788630-35788736)
chr4 (31-150)||(35788865-35788980)
chr4 (40-150)||(22827509-22827615)
chr4 (40-96)||(9685653-9685709)
chr4 (40-96)||(12005476-12005532)
chr4 (30-150)||(22845444-22845560)
chr4 (43-150)||(39902573-39902676)
chr4 (51-155)||(53698993-53699093)
chr4 (40-150)||(6218410-6218516)
chr4 (40-150)||(21498766-21498872)
chr4 (40-150)||(28245533-28245639)
chr4 (40-150)||(50543574-50543680)
chr4 (40-96)||(1518185-1518241)
chr4 (40-96)||(22231315-22231371)
chr4 (57-155)||(27464272-27464366)
chr4 (40-96)||(53559297-53559353)
chr4 (54-113)||(35796763-35796822)
chr4 (43-113)||(400575-400645)
chr4 (42-96)||(5398221-5398275)
chr4 (31-113)||(22863478-22863560)
chr4 (117-155)||(28208414-28208452)
chr4 (40-93)||(9685422-9685475)
chr4 (40-150)||(21498325-21498431)
chr4 (68-150)||(27634116-27634194)
chr4 (43-96)||(53828533-53828586)
chr4 (40-96)||(5846167-5846223)
chr4 (53-113)||(11036766-11036826)
chr4 (40-96)||(14783194-14783250)
chr4 (44-88)||(30529937-30529981)
chr4 (40-96)||(35819135-35819191)
chr4 (53-150)||(37836051-37836144)
chr4 (40-96)||(50543337-50543393)
[»] chr2 (21 HSPs)
chr2 (30-150)||(16419473-16419589)
chr2 (30-150)||(40379206-40379322)
chr2 (40-150)||(40379451-40379557)
chr2 (40-96)||(2324495-2324551)
chr2 (40-104)||(17854936-17855000)
chr2 (43-91)||(27897513-27897561)
chr2 (40-150)||(5711446-5711552)
chr2 (68-150)||(33606089-33606167)
chr2 (40-96)||(2324261-2324317)
chr2 (40-96)||(15124555-15124611)
chr2 (40-104)||(29718341-29718405)
chr2 (124-155)||(10523219-10523250)
chr2 (40-152)||(14927071-14927179)
chr2 (51-113)||(16533551-16533613)
chr2 (55-150)||(17719371-17719462)
chr2 (40-93)||(19191617-19191670)
chr2 (40-150)||(28407800-28407906)
chr2 (40-150)||(32884078-32884184)
chr2 (68-150)||(37812533-37812611)
chr2 (40-96)||(37769950-37770006)
chr2 (53-93)||(40149023-40149063)
[»] scaffold0692 (1 HSPs)
scaffold0692 (40-150)||(5761-5867)
[»] scaffold0334 (1 HSPs)
scaffold0334 (44-96)||(4440-4492)
[»] scaffold0519 (1 HSPs)
scaffold0519 (43-150)||(2122-2225)
[»] scaffold0092 (1 HSPs)
scaffold0092 (40-113)||(5659-5732)
[»] scaffold0047 (1 HSPs)
scaffold0047 (43-96)||(12668-12721)
[»] scaffold0005 (1 HSPs)
scaffold0005 (40-96)||(56480-56536)


Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 9830679 - 9830452
Alignment:
Q  18 atatctgtcacgactctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt-tta 116  Q
    |||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  9830679 atatttgtcacgactctgagagatcgtgattgaatctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattgtta 9830580  T
Q  117 tgttaggccatctcttatccgatgtgggactctttaacagcagcaaaagacatttttaaaccttactagtaatacagacatttttcataacactcgacgt 216  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  9830579 tgttaggccatctcttatccgatgtgggactctttaacagcaacaaaagacatttttaaaccttactagtaatacagacatttgtcataacactcggcgt 9830480  T
Q  217 atgagttaagatgctaaaggagtattat 244  Q
    ||||||||||||||||||||||||||||    
T  9830479 atgagttaagatgctaaaggagtattat 9830452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 51589883 - 51589819
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 104  Q
    |||||||||| | ||||||||||| || |||||||||||||||| ||||||||||||| ||||||    
T  51589883 atcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccctcacttat 51589819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 17452686 - 17452789
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| ||||||| |||    
T  17452686 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacat----tgtcaggccatgtcttatctgat 17452781  T
Q  140 gtgggact 147  Q
    ||||||||    
T  17452782 gtgggact 17452789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 4112547 - 4112620
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||| | ||||||||| | ||||||||||||||||||| ||| |||||||| ||||||| || |||||    
T  4112547 atcgtggttgtgcctaacacaatcccataaaatcggcttgtgaggtgatgattgcccctacttataaacacatt 4112620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 17452835 - 17452941
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||  | ||||||||||| || |||| ||||||||||| ||| ||||||||  |||||| || ||||    ||| ||||||| |||||||||||    
T  17452835 atcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaatacat----tgtcaggccatgtcttatccgat 17452930  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  17452931 gtgggactctt 17452941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 35772341 - 35772235
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| | ||||||||||  |||||| || |||||    || |||||||||| ||||||||    
T  35772341 atcgtggttgggcctaacacaaccccacaaaaccggcttctgaggtaaggattgcccccacttataaacacatt----gtcaggccatctcctatccgat 35772246  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  35772245 gtgggactctt 35772235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 42586446 - 42586551
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || ||||| |||||||||| ||||||||||||  ||||||  | ||||    ||| |||||||||||||||||||    
T  42586446 atcgtggttgggcctaacacaaccccacaaaattggcttgtgaggtgaggattgccc-cacttatatacacat----tgtcaggccatctcttatccgat 42586540  T
Q  140 gtgggactctt 150  Q
    ||| |||||||    
T  42586541 gtgagactctt 42586551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 25145492 - 25145548
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| |||||||||||||||| |||| || |||||||| ||||||||||||    
T  25145492 atcgtggttgggtctaacacaacctcacaaaaccgacttgtgaggtgaggattgccc 25145548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 40079229 - 40079124
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||| |||||| ||||||||    
T  40079229 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggtcatctcctatccgat 40079134  T
Q  140 gtgggactct 149  Q
    || |||||||    
T  40079133 gtaggactct 40079124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 146
Target Start/End: Complemental strand, 52961646 - 52961557
Alignment:
Q  53 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggac 146  Q
    ||||||||||| ||||||| |||||| |||| ||||||||||||| |||||| || ||||    ||| || ||||||| |||||||||||||||    
T  52961646 ctaacacaaccccataaaaccggcttttgaggtgaggattgccctcacttataaacacat----tgtcagaccatctcctatccgatgtgggac 52961557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 2859389 - 2859505
Alignment:
Q  30 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 129  Q
    ||||| ||| || ||||||| | |||||||||||||| | || ||||||||||| | ||||||||||  |||||| || ||||    ||| ||||||||     
T  2859389 actcttagaaatggtggttgggcctaacacaacctcacagaaccggcttgtgaggtaaggattgcccccacttataaacacat----tgtcaggccatca 2859484  T
Q  130 cttatccgatgtgggactctt 150  Q
    | |||||||||||||||||||    
T  2859485 cctatccgatgtgggactctt 2859505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 156
Target Start/End: Original strand, 4113013 - 4113124
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| ||  |||||||    
T  4113013 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcccatccgat 4113108  T
Q  140 gtgggactctttaacag 156  Q
    |||||||| ||||||||    
T  4113109 gtgggact-tttaacag 4113124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 151
Target Start/End: Original strand, 31181523 - 31181627
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | ||||||||||| ||||||| | ||||||||| ||||||||||||  |||||| || |||| |    | |||||||||||||||| |||||    
T  31181523 gtggttgggcctaacacaaccccataaaaccagcttgtgaggtgaggattgcccccacttataaacacatgt----tcaggccatctcttatccaatgtg 31181618  T
Q  143 ggactcttt 151  Q
    | |||||||    
T  31181619 gaactcttt 31181627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 27413424 - 27413371
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 93  Q
    ||||||||||   |||||||||||||| |||||||||||||||| |||||||||    
T  27413424 atcgtggttggacctaacacaacctcacaaaatcggcttgtgaggtgaggattg 27413371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 27413669 - 27413604
Alignment:
Q  30 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 95  Q
    ||||| ||| ||| |||||||| ||||||||||||||||||| ||  ||||||| |||||||||||    
T  27413669 actcttagaaatcatggttgagcctaacacaacctcataaaaccgatttgtgaggtgaggattgcc 27413604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 51589066 - 51589005
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 104  Q
    ||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  51589066 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 51589005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 38733459 - 38733353
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    ||||| |||| | |||||||||||||| |||| |||| | |||| ||||||||||||| ||||||  |||||| |  ||| || ||||| | ||||||||    
T  38733459 atcgttgttgggcctaacacaacctcacaaaaccggcctatgaggtgaggattgccctcacttat--aaacatat--tgtcagaccatcacatatccgat 38733364  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  38733363 gtgggactctt 38733353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 51589303 - 51589239
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 104  Q
    |||||||||  | ||||||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  51589303 atcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 51589239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 5953497 - 5953540
Alignment:
Q  54 taacacaacctcataaaatcggcttgtgagctgaggattgccct 97  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||    
T  5953497 taacacaacctcacaaaatcggctcgtgaggtgaggattgccct 5953540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 155
Target Start/End: Complemental strand, 17468341 - 17468310
Alignment:
Q  124 ccatctcttatccgatgtgggactctttaaca 155  Q
    ||||||||||||||||||||||||||||||||    
T  17468341 ccatctcttatccgatgtgggactctttaaca 17468310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 21626423 - 21626457
Alignment:
Q  121 aggccatctcttatccgatgtgggactctttaaca 155  Q
    ||||||||||||||| |||||||||||||||||||    
T  21626423 aggccatctcttatctgatgtgggactctttaaca 21626457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 25137313 - 25137416
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | ||||||||||| || |||| |||||| |||| |||||||||||| ||||||| || | ||    ||| |||||| ||| || ||||||||    
T  25137313 gtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgcccatacttataaacaaat----tgtcaggccaactcctaaccgatgtg 25137408  T
Q  143 ggactctt 150  Q
    ||||||||    
T  25137409 ggactctt 25137416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 3170067 - 3170014
Alignment:
Q  51 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 104  Q
    ||||||||||||| || |||| ||||||||||| | ||||||||||| ||||||    
T  3170067 gtctaacacaaccccacaaaaccggcttgtgaggtaaggattgccctcacttat 3170014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 5953206 - 5953267
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 104  Q
    ||||||||| |||||||||||| | ||||||| ||||||||  |||||||| ||| ||||||    
T  5953206 gtggttgagcctaacacaaccttacaaaatcgacttgtgaggagaggattgtcctcacttat 5953267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 40316057 - 40316110
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 93  Q
    ||||||||||  ||||||||||||||| |||| |||||| |||| |||||||||    
T  40316057 atcgtggttggatctaacacaacctcacaaaaccggcttatgaggtgaggattg 40316110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 2859638 - 2859686
Alignment:
Q  44 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 92  Q
    |||||| | |||||||||||||| |||| ||||||||||| ||||||||    
T  2859638 tggttggggctaacacaacctcacaaaaccggcttgtgaggtgaggatt 2859686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 3169843 - 3169787
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||| ||||||||    
T  3169843 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgccc 3169787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 9499322 - 9499259
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 104  Q
    |||||||||||||| ||||||||| || |||| ||| ||||||| ||| |||||||| |||||||    
T  9499322 atcgtggttgagtcgaacacaaccccacaaaaccgg-ttgtgaggtgaagattgcccctacttat 9499259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 31432237 - 31432293
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||| ||||||| || |||| ||||||||||| ||||||||||||    
T  31432237 atcgtggttgggcctagcacaaccccacaaaaccggcttgtgaggtgaggattgccc 31432293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 31496378 - 31496418
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgt 80  Q
    |||||| ||||||||||||||||| ||||||| ||||||||    
T  31496378 atcgtgattgagtctaacacaaccccataaaaccggcttgt 31496418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 33156810 - 33156754
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||| ||||||| ||||||||||||    
T  33156810 atcgtggttgggcctaacacaaccccacaaaaccggtttgtgagatgaggattgccc 33156754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 35772106 - 35772050
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||| ||| ||||||||||||    
T  35772106 atcgtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgccc 35772050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 52907461 - 52907405
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| |||| |||||||| || |||| | ||||||||| ||||||||||||    
T  52907461 atcgtggttgggtcttacacaaccccacaaaaccagcttgtgaggtgaggattgccc 52907405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 11211686 - 11211796
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | | ||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    |||||||||||||||||||||     
T  11211686 atcgtggttgggcccaacacaaccccacaaaaccggcttgtgaggtgaggattgcccc-acttataaagacatt----gttaggccatctcttatccgac 11211780  T
Q  140 gtgggactctttaaca 155  Q
    ||||||||||||||||    
T  11211781 gtgggactctttaaca 11211796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 42985134 - 42985185
Alignment:
Q  44 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 95  Q
    ||||||||||||||||||||||| ||||||| |||||||| |||||||||||    
T  42985134 tggttgagtctaacacaacctcacaaaatcgacttgtgaggtgaggattgcc 42985185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 26028972 - 26029022
Alignment:
Q  44 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgc 94  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||||||||    
T  26028972 tggttgggtctaacacaacctcacaaaatcggcttgtgaggtgaggattgc 26029022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 36277233 - 36277339
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || ||||||| |||||||| ||||||||||||  |||||| || ||||    ||| ||||||| |||| ||||||    
T  36277233 atcgtggttgggactaacacaaccccacaaaatcgacttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcttgtccgat 36277328  T
Q  140 gtgggactctt 150  Q
    ||| |||||||    
T  36277329 gtgagactctt 36277339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 48661562 - 48661668
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| ||||||||||| |||| |||| ||||||||||| ||||||||||||  || ||| || ||||    ||| ||| |||||| |||| |||    
T  48661562 atcgtggttgggtctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacctataaatacat----tgtcaggtcatctcctatctgat 48661657  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  48661658 gtgggactctt 48661668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 23796034 - 23796086
Alignment:
Q  44 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||| |||||||| || ||||||||||||||||||| ||||||||||||    
T  23796034 tggttgagcctaacacatccccataaaatcggcttgtgaggtgaggattgccc 23796086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 1596902 - 1596799
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | |||||||||||  | |||| |||||||| || ||||||||||||  |||||| |||||||    ||||||||||| || | |||||||||    
T  1596902 gtggttgggcctaacacaaccctacaaaaccggcttgtaaggtgaggattgcccccacttataaaaacat----tgttaggccatgtcctgtccgatgtg 1596807  T
Q  143 ggactctt 150  Q
    ||||||||    
T  1596806 ggactctt 1596799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 22574921 - 22574840
Alignment:
Q  31 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||| ||| |||||||||| | ||||||||| |||| |||  ||||||||||| ||||||||||||| |||||| ||||||||    
T  22574921 ctcttagaaatcgtggttgggcctaacacaaactcacaaatacggcttgtgaggtgaggattgccctcacttat-aaaacatt 22574840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 3038095 - 3038197
Alignment:
Q  44 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 143  Q
    |||||| | ||||||||||| || |||| ||||||||||  ||||||||||||  |||||| || ||||    |||||| | ||||||||| ||||||||    
T  3038095 tggttgggcctaacacaaccccacaaaaccggcttgtgacgtgaggattgcccccacttataaacacat----tgttagacaatctcttattcgatgtgg 3038190  T
Q  144 gactctt 150  Q
    |||||||    
T  3038191 gactctt 3038197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 17202256 - 17202150
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||| |||||||  |||||| || | ||    ||| |||||| |||||| |||||    
T  17202256 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgagaattgcccccacttataaacaaat----tgtcaggccaactcttaaccgat 17202161  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  17202160 gtgggactctt 17202150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 21054963 - 21055066
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  ||||||  |||||| |  ||| |||||||| | |||||||| ||    
T  21054963 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttat--aaacatat--tgtcaggccatcacctatccgatatg 21055058  T
Q  143 ggactctt 150  Q
    ||||||||    
T  21055059 ggactctt 21055066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 25620213 - 25620140
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  25620213 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 25620140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 29469682 - 29469576
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  29469682 atcgtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgat 29469587  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  29469586 gtgggactctt 29469576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 40746339 - 40746278
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 104  Q
    ||||||| | ||||||||||| || ||||||||||| |||| ||||||||||||| ||||||    
T  40746339 gtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgccctcacttat 40746278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 48243068 - 48243141
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  48243068 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 48243141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 24432196 - 24432148
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggat 91  Q
    |||||||||||||| ||||||||| |||||| ||||||||| |||||||    
T  24432196 gtggttgagtctaatacaacctcacaaaatcagcttgtgagatgaggat 24432148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 34027470 - 34027414
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  34027470 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 34027414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 6782938 - 6782883
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 95  Q
    |||||||||||| ||||||||||| || |||| |||||||| || |||||||||||    
T  6782938 atcgtggttgagcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcc 6782883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 36206070 - 36206125
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 95  Q
    |||||||||||| |||| |||||| ||||||| ||||||||||| ||| |||||||    
T  36206070 atcgtggttgagcctaatacaaccccataaaaccggcttgtgaggtgaagattgcc 36206125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 4507009 - 4506955
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgc 94  Q
    ||||| |||| ||||||||||||| ||||||| || |||||||| ||||||||||    
T  4507009 atcgtagttgggtctaacacaaccccataaaaccgacttgtgaggtgaggattgc 4506955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 21861368 - 21861265
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | ||||||||| | || |||| |||||||| || ||||||||||||| |||||| || ||||    ||| ||||||| || | |||||||||    
T  21861368 gtggttgggcctaacacaatcccacaaaaccggcttgtaaggtgaggattgccctcacttataaacacat----tgtcaggccatgtcctgtccgatgtg 21861273  T
Q  143 ggactctt 150  Q
    ||||||||    
T  21861272 ggactctt 21861265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 21861603 - 21861533
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    ||||||| | ||||||||||| || ||||||||||||| || ||||||||||||  |||||| || |||||    
T  21861603 gtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgcccccacttataaacacatt 21861533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 47710517 - 47710414
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | ||||||||||| || ||||  |||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | |||||||||||    
T  47710517 gtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaacacat----tgtaaggccatcacctatccgatgtg 47710422  T
Q  143 ggactctt 150  Q
     |||||||    
T  47710421 agactctt 47710414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 47722173 - 47722070
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | ||||||||||| || ||||  |||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | |||||||||||    
T  47722173 gtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaacacat----tgtaaggccatcacctatccgatgtg 47722078  T
Q  143 ggactctt 150  Q
     |||||||    
T  47722077 agactctt 47722070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 21822117 - 21822064
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    ||||||| ||||||||||| | || |||||| ||||||||| ||||||||||||    
T  21822117 gtggttgggtctaacacaaacccacaaaatctgcttgtgagatgaggattgccc 21822064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 29469917 - 29469811
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||  || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  29469917 atcgtggttgggcctaacacaactccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgat 29469822  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  29469821 gtgggactctt 29469811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 33996318 - 33996424
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||  || |||| || |||||||| ||| ||||||||  |||||| || ||||| |    |||||||| || ||||||||    
T  33996318 atcgtggttgggcctaacacaactccacaaaaccgacttgtgaggtgaagattgcccccacttataaatacattat----taggccatgtcctatccgat 33996413  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  33996414 gtgggactctt 33996424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 40991754 - 40991803
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 92  Q
    |||||||||||||||||||||||| |||| | | ||||||| ||||||||    
T  40991754 gtggttgagtctaacacaacctcacaaaaccagattgtgagatgaggatt 40991803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 48243448 - 48243517
Alignment:
Q  44 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||| ||||||||||||| || |||| |||||||| || ||||||||||||  |||||| || |||||    
T  48243448 tggttgggtctaacacaaccccacaaaaccggcttgtaagatgaggattgcccccacttataaacacatt 48243517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 2544454 - 2544510
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| || |||||||| ||||||||||||    
T  2544454 atcgtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgaggattgccc 2544510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 4886406 - 4886350
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | |||||||||||||   ||| ||||||||||| ||||||||||||    
T  4886406 atcgtggttgggcctaacacaacctcgccaaaccggcttgtgaggtgaggattgccc 4886350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 10903162 - 10903098
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 104  Q
    |||||||||| | ||||||||||  || |||| ||||||||||| |||||||| ||| |||||||    
T  10903162 atcgtggttggggctaacacaactccacaaaaccggcttgtgaggtgaggattacccctacttat 10903098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 21311415 - 21311455
Alignment:
Q  52 tctaacacaacctcataaaatcggcttgtgagctgaggatt 92  Q
    |||||||||||||||||||||||  ||||||| ||||||||    
T  21311415 tctaacacaacctcataaaatcgatttgtgagatgaggatt 21311455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 31257038 - 31257094
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||||||||||||||||| || ||||  || ||||||| ||| ||||||||    
T  31257038 atcgtggttgagtctaacacaaccccacaaaactggtttgtgaggtgaagattgccc 31257094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 31485679 - 31485739
Alignment:
Q  53 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||| ||| |||| |||||||| || ||||||||||||  |||||| ||||||||    
T  31485679 ctaacacaacttcacaaaaccggcttgtcaggtgaggattgcccccacttataaaaacatt 31485739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 9705340 - 9705225
Alignment:
Q  31 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctc 130  Q
    |||| ||| |||||||||| ||||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||||| ||||| ||    
T  9705340 ctcttagaaatcgtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgttaagccatgtc 9705245  T
Q  131 ttatccgatgtgggactctt 150  Q
     |||||||||||||||||||    
T  9705244 ctatccgatgtgggactctt 9705225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 12329951 - 12330057
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | |||||||||||||| |||||| ||||||||| ||||||||||||  |||||| || ||||    |||||   ||| |||||||||||    
T  12329951 atcgtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataaacacat----tgttatatcatatcttatccgat 12330046  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  12330047 gtgggactctt 12330057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 21690799 - 21690743
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||||| ||||||||||| || |||||||||||||||| ||||||||||||    
T  21690799 atcgtggttgagcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccc 21690743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 6054489 - 6054374
Alignment:
Q  31 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctc 130  Q
    |||| ||| |||||||||| |||||||||||||  | |||||||| ||||||| ||||||||||||  |||||| || || |    ||| || |||||||    
T  6054489 ctcttagaaatcgtggttgggtctaacacaaccctacaaaatcggtttgtgaggtgaggattgcccccacttataaatacct----tgtcagaccatctc 6054394  T
Q  131 ttatccgatgtgggactctt 150  Q
    ||||||||||| ||||||||    
T  6054393 ttatccgatgttggactctt 6054374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 4868584 - 4868690
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  4868584 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgat 4868679  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  4868680 gtgggactctt 4868690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 6542950 - 6543056
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| ||||||||||||| || |||| |||||| |||| ||| ||||||||  |||||| || ||||    ||| || ||||||||||||||||    
T  6542950 atcgtggttgggtctaacacaaccccacaaaaccggcttctgaggtgatgattgcccccacttataaacacat----tgtcagaccatctcttatccgat 6543045  T
Q  140 gtgggactctt 150  Q
    |||| ||||||    
T  6543046 gtggaactctt 6543056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 12330298 - 12330403
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | |||||||||||||| |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| || |||| || ||||||||    
T  12330298 atcgtggttgggcctaacacaacctcacaaaaccggcttgtgagatgaggattgccc-cacttataaacacat----tgtcagaccatgtcctatccgat 12330392  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  12330393 gtgggactctt 12330403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 25065101 - 25065207
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    ||||| |||| | ||||||||||| || |||| ||||||||||| |||||||||||| |||||||  |||||| |  ||| || |||| || ||||||||    
T  25065101 atcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccctacttat--aaacatat--tgtcagaccatgtcctatccgat 25065196  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  25065197 gtgggactctt 25065207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 33494613 - 33494510
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||||    | | |||||||| |||||||||||    
T  33494613 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacatattt----tcaagccatctcctatccgatgtg 33494518  T
Q  143 ggactctt 150  Q
    ||||||||    
T  33494517 ggactctt 33494510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 4868820 - 4868893
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  4868820 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 4868893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 12330186 - 12330259
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||| | |||||||||||||| |||| ||||||||||| ||||| ||||||  |||||| || |||||    
T  12330186 atcgtggttgggcctaacacaacctcacaaaaccggcttgtgaggtgagggttgcccccacttataaacacatt 12330259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 30256889 - 30256779
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  ||||||  |||||| |  ||| ||| |||| | ||||||||    
T  30256889 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc-cacttat--aaacatat--tgtcaggtcatcacctatccgat 30256795  T
Q  140 gtgggactctttaaca 155  Q
    ||||||||||| ||||    
T  30256794 gtgggactcttaaaca 30256779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 6237715 - 6237815
Alignment:
Q  41 tcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatg 140  Q
    ||||| ||||||||||||||||||||      ||||||||||| ||||||||||||| |||||| || ||||    ||| ||||| || ||||||| |||    
T  6237715 tcgtgattgagtctaacacaacctcac-----cggcttgtgaggtgaggattgccctcacttataaatacat----tgtcaggccttcacttatccaatg 6237805  T
Q  141 tgggactctt 150  Q
    ||||||||||    
T  6237806 tgggactctt 6237815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 8026466 - 8026410
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  8026466 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 8026410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 8026681 - 8026625
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  8026681 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 8026625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 4906872 - 4906810
Alignment:
Q  51 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    ||||||||||| | |||||||  |||||||||| ||||||||||||| |||||| || |||||    
T  4906872 gtctaacacaatcccataaaactggcttgtgagatgaggattgccctcacttataaacacatt 4906810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 13353275 - 13353172
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | |||||||||    
T  13353275 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgatgtg 13353180  T
Q  143 ggactctt 150  Q
    ||||||||    
T  13353179 ggactctt 13353172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 33796400 - 33796297
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | |||||||||    
T  33796400 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgatgtg 33796305  T
Q  143 ggactctt 150  Q
    ||||||||    
T  33796304 ggactctt 33796297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 7915926 - 7915872
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| ||||||||  ||| || |||||||||||||||| ||||||||||||    
T  7915926 atcgtggttgggtctaaca--accccacaaaatcggcttgtgaggtgaggattgccc 7915872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 20830820 - 20830771
Alignment:
Q  47 ttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||||||||||||| |||||| | ||||||| ||| ||||||||    
T  20830820 ttgagtctaacacaacctcacaaaatcagtttgtgaggtgatgattgccc 20830771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 5648692 - 5648752
Alignment:
Q  53 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||||||| |||| ||||||||||| ||| ||||| ||||| |||| || |||||    
T  5648692 ctaacacaacctcacaaaaccggcttgtgaggtgatgattgtccttaattataaacacatt 5648752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 11721982 - 11721926
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  11721982 atcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgccc 11721926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 17147680 - 17147773
Alignment:
Q  53 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 150  Q
    |||||| |||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||| ||| || |||||||||||||||||||    
T  17147680 ctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacat----tgtcaggtcatgtcctatccgatgtgggactctt 17147773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 20373647 - 20373584
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 104  Q
    |||||||||| | ||||||||||| || ||||| |||||||||| ||||||||||| | ||||||    
T  20373647 atcgtggttgggcctaacacaaccccacaaaat-ggcttgtgaggtgaggattgccatcacttat 20373584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 30256655 - 30256599
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||| ||||||| ||||||||||||    
T  30256655 atcgtggttgggcctaacacaaccccacaaaaccggtttgtgagttgaggattgccc 30256599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 54368593 - 54368487
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||  |||||| || |||||||     |||||||||  |||| |||    
T  54368593 atcgtggttgggtctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaacacattttc----aggccatcttctatcggat 54368498  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  54368497 gtgggactctt 54368487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 45138978 - 45139089
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| |||| |||||||| || |||| ||||||||||| ||||||||||||  |||||| || || |    ||| ||||||||||||||| |||    
T  45138978 atcgtggttgggtcttacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttattaacacgt----tgtcaggccatctcttatcagat 45139073  T
Q  140 gtgggactctttaaca 155  Q
    |||||||| |||||||    
T  45139074 gtgggactatttaaca 45139089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 20327621 - 20327727
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  20327621 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacat----tgtcaggccatgtcctatccgat 20327716  T
Q  140 gtgggactctt 150  Q
    |||||| ||||    
T  20327717 gtgggattctt 20327727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 35038201 - 35038307
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||| |||  |||||| || ||||    ||| |||||||| | ||||||||    
T  35038201 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacacat----tgtcaggccatcacctatccgat 35038296  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  35038297 gtgggactctt 35038307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 45138800 - 45138920
Alignment:
Q  31 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctc 130  Q
    |||| ||| |||||||||| |||| | |||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||  || |||||||    
T  45138800 ctctaagaaatcgtggttgggtctcatacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgccagaccatctc 45138895  T
Q  131 ttatccgatgtgggactctttaaca 155  Q
    ||||||||||||||||  |||||||    
T  45138896 ttatccgatgtgggacaatttaaca 45138920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 38791460 - 38791563
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | ||||||||||| || |||||||  ||||||| ||||||||| ||| |||||| || ||||    ||| || ||||||| |||||||||||    
T  38791460 gtggttgggcctaacacaaccccacaaaatcgatttgtgaggtgaggattgtcctcacttataaatacat----tgtcagaccatctcctatccgatgtg 38791555  T
Q  143 ggactctt 150  Q
    ||||||||    
T  38791556 ggactctt 38791563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 16926956 - 16927062
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    ||||||||||||  |||||||||| || |||| ||||||||||| |||||||| |||  |||||| || ||||    ||| ||||||| |  ||||||||    
T  16926956 atcgtggttgagcttaacacaaccccacaaaaccggcttgtgagatgaggattacccccacttataaacacat----tgtcaggccatgttctatccgat 16927051  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  16927052 gtgggactctt 16927062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 20303071 - 20303177
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||||| ||||||||| | || |||| ||| ||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  20303071 atcgtggttgagcctaacacaatcccacaaaaccggtttgtgaggtgaggattgcccccacttataaatacat----tgtcaggccatgtcatatccgat 20303166  T
Q  140 gtgggactctt 150  Q
    |||||| ||||    
T  20303167 gtgggattctt 20303177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 22729174 - 22729072
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | |||||||||||||| |||| ||||||||||  ||||||||||||  |||| | || ||||    ||| || ||||||| |||||||||||    
T  22729174 gtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttgtaaacacat----tgtcagaccatctcctatccgatgtg 22729079  T
Q  143 ggactct 149  Q
    |||||||    
T  22729078 ggactct 22729072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 1723083 - 1723139
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  1723083 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 1723139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 11589862 - 11589806
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  11589862 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 11589806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 31317305 - 31317249
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||||| ||||||||| | || |||| ||||||||||| ||||||||||||    
T  31317305 atcgtggttgagcctaacacaatcccacaaaaccggcttgtgaggtgaggattgccc 31317249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 35038436 - 35038541
Alignment:
Q  41 tcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatg 140  Q
    ||||||||| | ||||||||||| || |||| | |||||| || ||||||||||||  |||||| || ||||    ||| |||||||| | |||||||||    
T  35038436 tcgtggttgggcctaacacaaccccacaaaaccagcttgtcaggtgaggattgcccccacttataaacacat----tgtcaggccatcacctatccgatg 35038531  T
Q  141 tgggactctt 150  Q
    ||||||||||    
T  35038532 tgggactctt 35038541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 24866274 - 24866219
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 95  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||||||    
T  24866274 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcc 24866219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 45828083 - 45828040
Alignment:
Q  53 ctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||    
T  45828083 ctaacacaacctcacaaaaccggcttgtgaggtgaggattgccc 45828040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 34610648 - 34610582
Alignment:
Q  30 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    ||||| ||| || ||||||| ||||||||||||| || |||| || |||||||| ||||||||||||    
T  34610648 actcttagaaattgtggttgggtctaacacaaccccacaaaaccgacttgtgaggtgaggattgccc 34610582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 13741111 - 13741160
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 92  Q
    ||||||| ||||||||||||| || |||| ||||||||||| ||||||||    
T  13741111 gtggttgggtctaacacaaccccaaaaaaccggcttgtgaggtgaggatt 13741160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 16239668 - 16239562
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||| | || |||| ||||||||||| ||||| ||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  16239668 atcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggtttgcccccacttataaacacat----tgtcaggccatgtcctatccgat 16239573  T
Q  140 gtgggactctt 150  Q
    ||| |||||||    
T  16239572 gtgagactctt 16239562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 20327860 - 20327962
Alignment:
Q  44 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 143  Q
    |||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||||||    
T  20327860 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgatgtgg 20327955  T
Q  144 gactctt 150  Q
    |||||||    
T  20327956 gactctt 20327962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 54567969 - 54567896
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||| |||  |||||| || |||||    
T  54567969 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacacatt 54567896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 4155401 - 4155345
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  4155401 atcgtggttgggcctaacacaaccccacaaaaccggcttttgaggtgaggattgccc 4155345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 6487340 - 6487392
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 92  Q
    |||||||||| | |||| |||||| ||||||| ||||||||||| ||||||||    
T  6487340 atcgtggttgggcctaaaacaaccccataaaaccggcttgtgaggtgaggatt 6487392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 33205542 - 33205482
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttac 100  Q
    |||||||||| | ||||||||||| |  ||||  |||||||||| ||||||||||||||||    
T  33205542 atcgtggttgggcctaacacaaccccgcaaaactggcttgtgaggtgaggattgcccttac 33205482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 50052546 - 50052602
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||||||  ||||||||||||    
T  50052546 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaagtgaggattgccc 50052602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 50930768 - 50930667
Alignment:
Q  51 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 150  Q
    |||| |||||||| || |||| ||  ||||||| ||||||||||||  |||||| || |||| |||    ||||||||| ||||| ||||||||| ||||    
T  50930768 gtcttacacaaccccacaaaaccgttttgtgaggtgaggattgcccccacttataaacacatgtta----aggccatcttttatcagatgtgggagtctt 50930673  T
Q  151 taacag 156  Q
    ||||||    
T  50930672 taacag 50930667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 6361 - 6245
Alignment:
Q  30 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 129  Q
    ||||| ||| |||||||||| | ||||||||||| || |||||||||||||||| ||||||||||||  |||||| || ||||    ||| || | ||||    
T  6361 actctaagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaacacat----tgtcagactatct 6266  T
Q  130 cttatccgatgtgggactctt 150  Q
    |||||| ||||||||||||||    
T  6265 cttatctgatgtgggactctt 6245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 156
Target Start/End: Original strand, 38447447 - 38447546
Alignment:
Q  53 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactcttta 152  Q
    ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||||||||||||| ||||||| ||||||    
T  38447447 ctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatctcttatccgttgtgggattcttta 38447542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 22638186 - 22638295
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| |  |||||||||| || |||| ||||||||| | |||||||||||| |||||||  ||||| ||  ||  |||||||||||||||||||    
T  22638186 atcgtggttgggcttaacacaaccccacaaaaccggcttgtgtggtgaggattgcccctacttat--aaacactt--tgacaggccatctcttatccgat 22638281  T
Q  140 gtgggactctttaa 153  Q
    ||| ||||||||||    
T  22638282 gtgagactctttaa 22638295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 15042677 - 15042783
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||||| ||||||||||| || |||||||| ||| ||| ||| ||||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  15042677 atcgtggttgagcctaacacaaccccacaaaatcggtttgcgaggtgatgattgcccccacttataaacacat----tgtcaggccatgtcgtatccgat 15042772  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  15042773 gtgggactctt 15042783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 17469895 - 17469789
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  17469895 atcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 17469800  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  17469799 gtgggactctt 17469789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 17477142 - 17477036
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  17477142 atcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 17477047  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  17477046 gtgggactctt 17477036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 24532432 - 24532534
Alignment:
Q  44 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 143  Q
    |||||| | ||||||||||| || |||| ||||||||||| ||| ||||||||  |||||| || ||||    ||| |||||||||| ||||||||||||    
T  24532432 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaacacat----tgtcaggccatctcctatccgatgtgg 24532527  T
Q  144 gactctt 150  Q
    |||||||    
T  24532528 gactctt 24532534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 39052936 - 39053042
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    ||||| |||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | ||||||||    
T  39052936 atcgttgttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatcacctatccgat 39053031  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  39053032 gtgggactctt 39053042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 39743606 - 39743500
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||||||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  39743606 atcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccccaacttataaacaaat----tgtcaggccaactcctaaccgat 39743511  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  39743510 gtgggactctt 39743500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 20702874 - 20702818
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||| |||||||||||||||||||| |||| |||||| |||| ||||||||||||    
T  20702874 atcgtgattgagtctaacacaacctcacaaaaccggcttatgagatgaggattgccc 20702818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 39960279 - 39960162
Alignment:
Q  30 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg-cccttacttatcaaaacattttatgttaggccatc 128  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||| |||  |||||| || | ||||    | ||||||||    
T  39960279 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccccccacttataaacaaattt----tcaggccatc 39960184  T
Q  129 tcttatccgatgtgggactctt 150  Q
    || |||||||||||||||||||    
T  39960183 tcctatccgatgtgggactctt 39960162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 10450087 - 10449971
Alignment:
Q  30 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 129  Q
    ||||| ||| |||||||||||| |||||||||||  | |||| |||||| |||| ||||||||||||  |||||| || ||||    ||| ||||||| |    
T  10450087 actcttagaaatcgtggttgagcctaacacaaccctacaaaaccggcttctgaggtgaggattgcccacacttataaacacat----tgtcaggccatgt 10449992  T
Q  130 cttatccgatgtgggactctt 150  Q
    | ||||||||||| |||||||    
T  10449991 cctatccgatgtgagactctt 10449971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 155
Target Start/End: Complemental strand, 8716187 - 8716080
Alignment:
Q  44 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 143  Q
    |||||| ||||||||||||| || ||||||||||| |||| ||||||||||| | |||| | || ||||    ||| || |||||||||||||||| ||     
T  8716187 tggttgggtctaacacaaccccacaaaatcggcttatgaggtgaggattgccttcacttttaaacacat----tgtgagaccatctcttatccgatatga 8716092  T
Q  144 gactctttaaca 155  Q
    || |||||||||    
T  8716091 gattctttaaca 8716080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 34843194 - 34843140
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgc 94  Q
    ||||||||| |||||||||||||| || |||| ||||||||||| ||||||||||    
T  34843194 atcgtggttcagtctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 34843140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 4828149 - 4828092
Alignment:
Q  36 agagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 93  Q
    |||||||||||||| | ||||||||||| || |||| ||||||||||| |||||||||    
T  4828149 agagatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg 4828092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 149
Target Start/End: Original strand, 5590378 - 5590480
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | |||||||||||||| |||| ||||||||||  ||||||||||||  |||| | || ||||    ||| || ||||||| |||||||||||    
T  5590378 gtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttgtaaacacat----tgtcagaccatctcctatccgatgtg 5590473  T
Q  143 ggactct 149  Q
    |||||||    
T  5590474 ggactct 5590480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 18939307 - 18939360
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    ||||||| | |||||||||||||| |||||| ||||||||| ||||||||||||    
T  18939307 gtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgccc 18939360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 19256593 - 19256699
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  19256593 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 19256688  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  19256689 gtgggactctt 19256699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 28069364 - 28069470
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    ||||||||||  |||||||||||  || |||||| | ||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  28069364 atcgtggttggatctaacacaactccacaaaatcagtttgtgaggtgaggattgcccccacttataaatacat----tgtcaggccatgtcatatccgat 28069459  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  28069460 gtgggactctt 28069470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 29005941 - 29005888
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 93  Q
    |||||||||| |||||||||||||||||||| ||||||| |||  |||||||||    
T  29005941 atcgtggttgggtctaacacaacctcataaattcggcttatgaagtgaggattg 29005888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 42846612 - 42846669
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccct 97  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||||||||    
T  42846612 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccct 42846669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 24075313 - 24075369
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  24075313 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 24075369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 30201610 - 30201642
Alignment:
Q  123 gccatctcttatccgatgtgggactctttaaca 155  Q
    |||||||||||||||||||||||||||||||||    
T  30201610 gccatctcttatccgatgtgggactctttaaca 30201642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 4828367 - 4828259
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| | |||| ||| || ||||||||    
T  4828367 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcatgccaactcctaaccgatgtg 4828272  T
Q  143 ggactctttaaca 155  Q
    |||||||||||||    
T  4828271 ggactctttaaca 4828259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 37001303 - 37001194
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||  || |||| ||||||||||| ||||||||||||  || |||  ||||| ||  ||| |||||||||||  | ||||    
T  37001303 atcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacctat--aaacactt--tgtgaggccatctctcgttcgat 37001208  T
Q  140 gtgggactctttaa 153  Q
    ||||||||||||||    
T  37001207 gtgggactctttaa 37001194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 11232204 - 11232307
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | |||||||||    
T  11232204 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgatgtg 11232299  T
Q  143 ggactctt 150  Q
    ||||||||    
T  11232300 ggactctt 11232307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 3157569 - 3157622
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    ||||||||| ||||||||||| || ||||  |||||||||| ||||||||||||    
T  3157569 gtggttgagcctaacacaaccccacaaaactggcttgtgaggtgaggattgccc 3157622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 8466810 - 8466843
Alignment:
Q  123 gccatctcttatccgatgtgggactctttaacag 156  Q
    |||||||||||||||||||| |||||||||||||    
T  8466810 gccatctcttatccgatgtgagactctttaacag 8466843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 12688149 - 12688076
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||| |||||||||||| |||  || |||| ||||||||||| || |||||||||| |||||| || |||||    
T  12688149 atcgtgtttgagtctaacataactccacaaaaccggcttgtgaggtggggattgccctcacttataaacacatt 12688076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 19256827 - 19256933
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| | ||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  19256827 atcgtggttgggcctaacacaaccccacaaaacctgcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 19256922  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  19256923 gtgggactctt 19256933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 20301338 - 20301265
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||| | |||||||||||||| ||||  |||||||||| | ||||||||||  |||||| || |||||    
T  20301338 atcgtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaacacatt 20301265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 21087970 - 21087897
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||| | |||||||||||||| ||||  |||||||||| | ||||||||||  |||||| || |||||    
T  21087970 atcgtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaacacatt 21087897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 27205246 - 27205181
Alignment:
Q  31 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||| ||| |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  27205246 ctcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgccc 27205181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 155
Target Start/End: Original strand, 29907815 - 29907844
Alignment:
Q  126 atctcttatccgatgtgggactctttaaca 155  Q
    ||||||||||||||||||||||||||||||    
T  29907815 atctcttatccgatgtgggactctttaaca 29907844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 35682788 - 35682861
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||| | ||||||||||| || |||| ||||||| ||| ||||||||||||  |||||| || |||||    
T  35682788 atcgtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgcccccacttataaacacatt 35682861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 10614946 - 10614998
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 92  Q
    |||||||||||| |||| |||||| || |||||||||||||||| ||| ||||    
T  10614946 atcgtggttgagcctaatacaaccccacaaaatcggcttgtgaggtgaagatt 10614998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 10884141 - 10884086
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  10884141 atcgtggttgggcctaacacaacc-cacaaaaccggcttgtgaggtgaggattgccc 10884086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 15686047 - 15686095
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgag 88  Q
    |||||||||||||||||||||| | || |||| ||||||||||| ||||    
T  15686047 atcgtggttgagtctaacacaatcccacaaaaccggcttgtgaggtgag 15686095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 27205041 - 27204985
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  27205041 atcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgccc 27204985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 27205139 - 27205083
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  27205139 atcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgccc 27205083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 24346511 - 24346614
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||||| ||||||||||| ||||||| ||||||||||| |||||||| |||  |||||| || ||||    ||| ||||||| || |||||||||||    
T  24346511 gtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattacccccacttataaacacat----tgtcaggccatgtcctatccgatgtg 24346606  T
Q  143 ggactctt 150  Q
    ||||||||    
T  24346607 ggactctt 24346614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 156
Target Start/End: Original strand, 1564574 - 1564686
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||||| ||||||||||| || ||||  | |||||||  ||||||||||||  |||||| |  |||||    || || ||||||||||||||||    
T  1564574 atcgtggttgagcctaacacaaccccacaaaactgtcttgtgatgtgaggattgcccccacttataatcacatt----gtcagaccatctcttatccgat 1564669  T
Q  140 gtgggactctttaacag 156  Q
    |||||||||||||||||    
T  1564670 gtgggactctttaacag 1564686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 41666754 - 41666870
Alignment:
Q  30 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 129  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| |    
T  41666754 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgt 41666849  T
Q  130 cttatccgatgtgggactctt 150  Q
    | | |||||||||||||||||    
T  41666850 cctgtccgatgtgggactctt 41666870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 155
Target Start/End: Complemental strand, 15438950 - 15438843
Alignment:
Q  44 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 143  Q
    ||||||||||||||||||||  | |||||||||||||||| ||||||||||||  |||||| || ||||    | | || ||||||| |||||||||||     
T  15438950 tggttgagtctaacacaaccctagaaaatcggcttgtgaggtgaggattgcccccacttataaacacat----tatcagaccatctcatatccgatgtga 15438855  T
Q  144 gactctttaaca 155  Q
     |||||||||||    
T  15438854 aactctttaaca 15438843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 24269881 - 24269983
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||||| ||||||||||| ||||||| ||||||||||| |||||||| |||  |||||| || ||||    ||| ||||||| || |||||||||||    
T  24269881 gtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattaccc-cacttataaacacat----tgtcaggccatgtcctatccgatgtg 24269975  T
Q  143 ggactctt 150  Q
    ||||||||    
T  24269976 ggactctt 24269983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 28510168 - 28510057
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||| | |||||| || ||||    ||| ||| ||||||||||| |||    
T  28510168 atcgtggttgggcctaacacaaccccacaaaaccggcttatgagatgaggattgccttcacttataaacacat----tgtcaggtcatctcttatctgat 28510073  T
Q  140 gtgggactctttaaca 155  Q
    || |||||||||||||    
T  28510072 gttggactctttaaca 28510057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 24346744 - 24346850
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| ||||||||||||| || |||| ||||||||||| |||| ||| |||  |||||| || ||||    ||| ||||||| |||||| ||||    
T  24346744 atcgtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgagtattacccccacttataaatacat----tgtcaggccatgtcttattcgat 24346839  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  24346840 gtgggactctt 24346850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 41667000 - 41667106
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  41667000 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgat 41667095  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  41667096 gtgggactctt 41667106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 27133000 - 27133064
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 104  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  27133000 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 27133064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 9187363 - 9187320
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgag 83  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  9187363 atcgtggttgagtctaacacaaccccacaaaatcggcttgtgag 9187320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 17352445 - 17352547
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||||| ||||| |||||||| |||| ||||||||||| ||| ||||||||  |||||| || ||||    ||| ||| |||||||||| |||||||    
T  17352445 gtggttgagcctaacgcaacctcacaaaaccggcttgtgaggtgatgattgcccccacttataaacacat----tgtcaggtcatctcttat-cgatgtg 17352539  T
Q  143 ggactctt 150  Q
    ||||||||    
T  17352540 ggactctt 17352547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 24531676 - 24531603
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||| |  |||||||||| || |||||||||||||||| ||||||||||||  |||||| || |||||    
T  24531676 atcgtggttgggcataacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaacacatt 24531603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 7369798 - 7369690
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgtt-aggccatctcttatccgatgt 141  Q
    ||||||| | ||||||||||| || |||| ||||||||||| |||||| |||||  ||||||  ||||| ||   ||| | |||||||||||||| ||||    
T  7369798 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggactgcccccacttat--aaacactt---gttcatgccatctcttatccaatgt 7369704  T
Q  142 gggactctttaaca 155  Q
    ||||||||||||||    
T  7369703 gggactctttaaca 7369690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 17015890 - 17015950
Alignment:
Q  44 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 104  Q
    |||||| | ||||||||||| || |||||||||||||||| |||| |||||||| ||||||    
T  17015890 tggttgggcctaacacaaccccacaaaatcggcttgtgaggtgagaattgccctcacttat 17015950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 19522397 - 19522341
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| ||||||||||||| || |||||||||||||||| |||  |||||||    
T  19522397 atcgtggttgtgtctaacacaaccccacaaaatcggcttgtgaggtgattattgccc 19522341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 25258101 - 25258157
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  25258101 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 25258157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 25258308 - 25258364
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    ||||||||||||| |||||||||| || |||| || |||||||| ||||||||||||    
T  25258308 atcgtggttgagtttaacacaaccccacaaaaccgacttgtgaggtgaggattgccc 25258364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 25321891 - 25321947
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  25321891 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 25321947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 25322098 - 25322154
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    ||||||||||||| |||||||||| || |||| || |||||||| ||||||||||||    
T  25322098 atcgtggttgagtttaacacaaccccacaaaaccgacttgtgaggtgaggattgccc 25322154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 38731623 - 38731674
Alignment:
Q  53 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 104  Q
    ||||||||||||||||||||||||||||||| ||  |||||| || ||||||    
T  38731623 ctaacacaacctcataaaatcggcttgtgaggtggtgattgctctcacttat 38731674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 6413444 - 6413506
Alignment:
Q  51 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    ||||||||||||| || ||||||||||| |||| ||||||||||||  |||||| || |||||    
T  6413444 gtctaacacaaccccacaaaatcggcttatgaggtgaggattgcccccacttataaacacatt 6413506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 8081124 - 8081227
Alignment:
Q  44 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg-cccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    |||||| | ||||||||||| || |||| ||||||||||| ||||||||| |||  |||||| || ||||    ||| ||||||| || |||||||||||    
T  8081124 tggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgccccccacttataaacacat----tgtcaggccatgtcctatccgatgtg 8081219  T
Q  143 ggactctt 150  Q
    ||||||||    
T  8081220 ggactctt 8081227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 9368904 - 9368801
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | ||||||||||| || | |||||||||||||  |||| |||||||  |||||| || |||||    || | |||||||| |||||||||||    
T  9368904 gtggttgggcctaacacaaccccacataatcggcttgtgaagtgagaattgcccccacttataaacacatt----gtcatgccatctcctatccgatgtg 9368809  T
Q  143 ggactctt 150  Q
    ||||||||    
T  9368808 ggactctt 9368801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 18333475 - 18333578
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | ||||||||||| || |||| ||||||||||| |||||||| |||  |||||| || ||||    ||| || ||||||| |||||||||||    
T  18333475 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacacat----tgtcagaccatctcctatccgatgtg 18333570  T
Q  143 ggactctt 150  Q
    ||| ||||    
T  18333571 ggattctt 18333578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 38731848 - 38731898
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 93  Q
    ||||||| | |||||||||||||| ||||||| |||||||| |||||||||    
T  38731848 gtggttgtgcctaacacaacctcacaaaatcgacttgtgaggtgaggattg 38731898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 20225118 - 20225065
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 93  Q
    |||||||||||  ||||||||||| || ||||||| |||||||| |||||||||    
T  20225118 atcgtggttgaacctaacacaaccccacaaaatcgacttgtgaggtgaggattg 20225065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 21306964 - 21306891
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||| ||||||||||| | || || | ||||||||||| ||||||||||||  |||||| || |||||    
T  21306964 atcgtggttgggtctaacacaatcccacaataccggcttgtgaggtgaggattgcccccacttataaatacatt 21306891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 21314802 - 21314729
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||| ||||||||||| | || || | ||||||||||| ||||||||||||  |||||| || |||||    
T  21314802 atcgtggttgggtctaacacaatcccacaataccggcttgtgaggtgaggattgcccccacttataaatacatt 21314729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 24528613 - 24528544
Alignment:
Q  44 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  24528613 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 24528544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 43117959 - 43117902
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccct 97  Q
    ||||| |||| | |||||||||||  |||||| ||||||||||| |||||||||||||    
T  43117959 atcgttgttgggcctaacacaaccctataaaaccggcttgtgagatgaggattgccct 43117902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 8098394 - 8098338
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| |  |||||||||| || |||| ||||||||||| ||||||||||||    
T  8098394 atcgtggttgggcttaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 8098338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 19522164 - 19522108
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| ||| || |||||| || |||| ||||||||||| ||||||||||||    
T  19522164 atcgtggttgggtcaaatacaaccccacaaaaccggcttgtgaggtgaggattgccc 19522108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 24487652 - 24487704
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 92  Q
    |||||||||| |  ||||||||||||| |||| ||||||||||| ||||||||    
T  24487652 atcgtggttgggcttaacacaacctcacaaaaccggcttgtgaggtgaggatt 24487704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 33337462 - 33337518
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||||  ||||||||||| || |||| ||| ||||||| ||||||||||||    
T  33337462 atcgtggttgaacctaacacaaccccacaaaaccggtttgtgagatgaggattgccc 33337518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 155
Target Start/End: Original strand, 44118878 - 44118977
Alignment:
Q  52 tctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactcttt 151  Q
    |||||||||||| || ||||  |||||||||| |||||||| |||  |||||| || |||||    || |||||||||||||||||||||||||||||||    
T  44118878 tctaacacaaccccacaaaacgggcttgtgaggtgaggattacccccacttataaacacatt----gtcaggccatctcttatccgatgtgggactcttt 44118973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 35788736 - 35788630
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| ||||||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || |||| |||    
T  35788736 atcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctatctgat 35788641  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  35788640 gtgggactctt 35788630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 35788980 - 35788865
Alignment:
Q  31 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctc 130  Q
    |||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| |     
T  35788980 ctcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgcccccacttataaacacat----tgtcaggccatgtt 35788885  T
Q  131 ttatccgatgtgggactctt 150  Q
     |||||||||||||||||||    
T  35788884 ctatccgatgtgggactctt 35788865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 22827615 - 22827509
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | |||||||||||  | |||| ||||||||||| ||||||||||||  |||||| || || |    ||| |||||||||| ||||||||    
T  22827615 atcgtggttgggcctaacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaacacgt----tgtcaggccatctcctatccgat 22827520  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  22827519 gtgggactctt 22827509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 9685709 - 9685653
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| ||||||| ||||||||||| ||||||||||||    
T  9685709 atcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgccc 9685653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 12005476 - 12005532
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    ||||| |||| |||||||||||||||| |||| ||||||||||| ||||||||||||    
T  12005476 atcgttgttgggtctaacacaacctcacaaaaccggcttgtgaggtgaggattgccc 12005532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 22845444 - 22845560
Alignment:
Q  30 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 129  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| |||||||| |||  |||||| || ||||    ||| ||||||| |    
T  22845444 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacacat----tgtcaggccatgt 22845539  T
Q  130 cttatccgatgtgggactctt 150  Q
    | |||| ||||||||||||||    
T  22845540 catatctgatgtgggactctt 22845560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 39902573 - 39902676
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | ||||||||||| || |||| | ||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || |||||||||||    
T  39902573 gtggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctatccgatgtg 39902668  T
Q  143 ggactctt 150  Q
    ||||||||    
T  39902669 ggactctt 39902676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 155
Target Start/End: Complemental strand, 53699093 - 53698993
Alignment:
Q  51 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 150  Q
    ||||||||||||| |||||| |||| ||||||| ||||||||||||  ||||||  |||||| |  ||| ||  |||||||||| || ||||||||||||    
T  53699093 gtctaacacaaccccataaagtcggtttgtgaggtgaggattgcccacacttat--aaacatat--tgtcagatcatctcttattcgttgtgggactctt 53698998  T
Q  151 taaca 155  Q
    |||||    
T  53698997 taaca 53698993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 6218516 - 6218410
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||||| |||||||||   ||||||| ||||||||||| ||| ||||||||  |||||| || ||||    ||||||| |||||| |||| |||    
T  6218516 atcgtggttgagcctaacacaattccataaaaccggcttgtgaggtgatgattgcccccacttataaacacat----tgttaggtcatctcctatctgat 6218421  T
Q  140 gtgggactctt 150  Q
    ||| |||||||    
T  6218420 gtgagactctt 6218410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 21498872 - 21498766
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  21498872 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 21498777  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  21498776 gtgggactctt 21498766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 28245533 - 28245639
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    ||||| |||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | ||||||||    
T  28245533 atcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatcacctatccgat 28245628  T
Q  140 gtgggactctt 150  Q
    ||| |||||||    
T  28245629 gtgagactctt 28245639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 50543574 - 50543680
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||  || |||| ||||||||||| ||||||||||||  ||||||  | ||||    ||| |||||||| | ||||||||    
T  50543574 atcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttatacacacat----tgtcaggccatcacctatccgat 50543669  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  50543670 gtgggactctt 50543680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 1518241 - 1518185
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||  | ||||||||||| || |||| ||||||||||||||||||||||||    
T  1518241 atcgtggttaggcctaacacaaccccacaaaaccggcttgtgagctgaggattgccc 1518185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 22231315 - 22231371
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  22231315 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 22231371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 27464272 - 27464366
Alignment:
Q  57 cacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctttaaca 155  Q
    ||||||| || |||| ||||||||||| |||||||||||   ||||||  ||||| |||  || |||  ||||||||||||||||||||||||||||||    
T  27464272 cacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttat--aaacacttt--gtcaggaaatctcttatccgatgtgggactctttaaca 27464366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 53559297 - 53559353
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || ||||||||||||| || ||||||||||||    
T  53559297 atcgtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgccc 53559353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 35796763 - 35796822
Alignment:
Q  54 taacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  35796763 taacacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 35796822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 400575 - 400645
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||  ||||||||||||| |||| ||||||||||| |||||||| |||  |||||| || |||||    
T  400575 gtggttgagcttaacacaacctcacaaaaccggcttgtgaggtgaggatttcccccacttataaacacatt 400645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 5398221 - 5398275
Alignment:
Q  42 cgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  5398221 cgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgccc 5398275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 22863560 - 22863478
Alignment:
Q  31 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||| ||| |||||||||| | ||||||||||| || |||| ||||||||| | ||||||||||||  |||||| || |||||    
T  22863560 ctcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttataaacacatt 22863478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 155
Target Start/End: Original strand, 28208414 - 28208452
Alignment:
Q  117 tgttaggccatctcttatccgatgtgggactctttaaca 155  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  28208414 tgttagaccatctcttatccaatgtgggactctttaaca 28208452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 9685475 - 9685422
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 93  Q
    |||||||||| | |||||||||||||| |||| || |||||||| |||||||||    
T  9685475 atcgtggttgggcctaacacaacctcacaaaaccgacttgtgaggtgaggattg 9685422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 21498431 - 21498325
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | |||||| |||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  21498431 atcgtggttgggcctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 21498336  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  21498335 gtgggactctt 21498325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 27634116 - 27634194
Alignment:
Q  68 aaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 150  Q
    |||||||| ||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || |||||||||||||||||||    
T  27634116 aaaatcggtttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctatccgatgtgggactctt 27634194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 53828533 - 53828586
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    ||||||| | ||||||||||| || ||||||||||| |||| ||||||||||||    
T  53828533 gtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgccc 53828586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 5846223 - 5846167
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||||| ||||| ||||| || |||| |||||| |||| ||||||||||||    
T  5846223 atcgtggttgagcctaacgcaaccccacaaaaccggcttatgaggtgaggattgccc 5846167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 11036766 - 11036826
Alignment:
Q  53 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    ||||||||||| || | |||||||||||||| ||||||||||||  |||||| || |||||    
T  11036766 ctaacacaaccccacacaatcggcttgtgaggtgaggattgcccccacttataaacacatt 11036826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 14783194 - 14783250
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||| ||||||||    
T  14783194 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgccc 14783250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 30529937 - 30529981
Alignment:
Q  44 tggttgagtctaacacaacctcataaaatcggcttgtgagctgag 88  Q
    |||||||| ||||||||| ||||||||| ||||||||||| ||||    
T  30529937 tggttgagcctaacacaatctcataaaaccggcttgtgaggtgag 30529981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 35819135 - 35819191
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | |||||||||||||| ||||  ||||||||||  |||||||||||    
T  35819135 atcgtggttgggcctaacacaacctcacaaaactggcttgtgaggcgaggattgccc 35819191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 37836144 - 37836051
Alignment:
Q  53 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 150  Q
    ||||||||||| || |||| |||||||| ||  |||||||||||  |||||| || |||||    |||||||||| || | |||||||||||||||||    
T  37836144 ctaacacaaccccacaaaaccggcttgtaaggagaggattgcccccacttataaatacatt----gttaggccatgtcctgtccgatgtgggactctt 37836051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 50543337 - 50543393
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||||| | ||||||||||||    
T  50543337 atcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgccc 50543393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 16419589 - 16419473
Alignment:
Q  30 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 129  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| || |||| |    
T  16419589 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcagaccatgt 16419494  T
Q  130 cttatccgatgtgggactctt 150  Q
    | |||||||||||||||||||    
T  16419493 cctatccgatgtgggactctt 16419473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 40379206 - 40379322
Alignment:
Q  30 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 129  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||     ||| ||||||||     
T  40379206 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca----ctgtcaggccatca 40379301  T
Q  130 cttatccgatgtgggactctt 150  Q
    | |||||||||||||||||||    
T  40379302 cctatccgatgtgggactctt 40379322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 40379451 - 40379557
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||     ||| |||||||| | ||||||||    
T  40379451 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca----ctgtcaggccatcacctatccgat 40379546  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  40379547 gtgggactctt 40379557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 2324551 - 2324495
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||||    
T  2324551 atcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 2324495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 17854936 - 17855000
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 104  Q
    |||||||||| ||||| ||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  17854936 atcgtggttgggtctagcacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 17855000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 27897513 - 27897561
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggat 91  Q
    ||||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  27897513 gtggttgagcctaacacaacctcataaaaccggcttgtgaggtgaggat 27897561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 5711446 - 5711552
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  5711446 atcgtggttgggcctaacacaaccccacaaaaccggcttgttaggtgaggattgcccccacttataaacacat----tgtcaggccatttcctttccgat 5711541  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  5711542 gtgggactctt 5711552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 33606089 - 33606167
Alignment:
Q  68 aaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 150  Q
    |||| ||| ||||||| |||||||||||| ||||||| || |||||||     |||||||||| |||||||||||||||||||    
T  33606089 aaaaccggtttgtgaggtgaggattgcccctacttataaacacattttc----aggccatctcctatccgatgtgggactctt 33606167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 2324317 - 2324261
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  2324317 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 2324261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 15124555 - 15124611
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| ||||||||||||| || ||||||||||| |||| || |||||||||    
T  15124555 atcgtggttgggtctaacacaaccccacaaaatcggcttatgaggtggggattgccc 15124611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 29718405 - 29718341
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 104  Q
    |||||||||  | ||||||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  29718405 atcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 29718341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 155
Target Start/End: Complemental strand, 10523250 - 10523219
Alignment:
Q  124 ccatctcttatccgatgtgggactctttaaca 155  Q
    ||||||||||||||||||||||||||||||||    
T  10523250 ccatctcttatccgatgtgggactctttaaca 10523219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 14927179 - 14927071
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||||| ||||||||||| || |||   | ||| |||| ||||||||||||  |||||| || |||||    || ||| |||||||||||||||    
T  14927179 atcgtggttgagcctaacacaaccacacaaagctgacttatgaggtgaggattgcccccacttataaacacatt----gtcaggtcatctcttatccgat 14927084  T
Q  140 gtgggactcttta 152  Q
    ||| |||||||||    
T  14927083 gtgtgactcttta 14927071  T

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Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 16533613 - 16533551
Alignment:
Q  51 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||||||||| |||| ||||||||||  ||||||||||||  |||||| || |||||    
T  16533613 gtctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttataaacacatt 16533551  T

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Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 150
Target Start/End: Complemental strand, 17719462 - 17719371
Alignment:
Q  55 aacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 150  Q
    |||||||||  | |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | |||||||||||||||||||    
T  17719462 aacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatcacctatccgatgtgggactctt 17719371  T

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Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 19191617 - 19191670
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 93  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||||    
T  19191617 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg 19191670  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 28407800 - 28407906
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||  || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||||||||||  || || |||||    
T  28407800 atcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgttaggccaattcctaaccgat 28407895  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  28407896 gtgggactctt 28407906  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 32884184 - 32884078
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    ||||| |||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  32884184 atcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 32884089  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  32884088 gtgggactctt 32884078  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 37812533 - 37812611
Alignment:
Q  68 aaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 150  Q
    ||||||| |||||||| ||||||||||||  |||||| || ||||    ||| ||| ||| ||||||||||||||||||||||    
T  37812533 aaaatcgacttgtgaggtgaggattgcccccacttataaacacat----tgtcaggtcatgtcttatccgatgtgggactctt 37812611  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 37769950 - 37770006
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| ||||||||||||| || |||| |||||| |||| ||| ||||||||    
T  37769950 atcgtggttgggtctaacacaaccccacaaaaccggcttatgaggtgaagattgccc 37770006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 40149023 - 40149063
Alignment:
Q  53 ctaacacaacctcataaaatcggcttgtgagctgaggattg 93  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  40149023 ctaacacaaccccacaaaatcggcttgtgaggtgaggattg 40149063  T

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Target: scaffold0692 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 5761 - 5867
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 139  Q
    |||||||||| | ||||||||||| |  |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| || | || |||||||||||    
T  5761 atcgtggttgggcctaacacaaccccgcaaaaccggcttgtgagatgaggattgcccccacttataaacacat----tgtcagactatgtcttatccgat 5856  T
Q  140 gtgggactctt 150  Q
    |||||||||||    
T  5857 gtgggactctt 5867  T

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Target: scaffold0334 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 4440 - 4492
Alignment:
Q  44 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||| ||||||||||| || |||| ||||||||||| ||||||||||||    
T  4440 tggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 4492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 2225 - 2122
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 142  Q
    ||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | |||||||||    
T  2225 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgatgtg 2130  T
Q  143 ggactctt 150  Q
    ||||||||    
T  2129 ggactctt 2122  T

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Target: scaffold0092 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 5732 - 5659
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 113  Q
    |||||||||| ||||||||||||| || |||| |||||||| || |||||||| |||  |||||| || |||||    
T  5732 atcgtggttgggtctaacacaaccccacaaaaccggcttgtaagatgaggattacccccacttataaacacatt 5659  T

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Target: scaffold0047 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 12721 - 12668
Alignment:
Q  43 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    ||||||| | ||||||||||| || ||||||| |||||||| ||||||||||||    
T  12721 gtggttgggcctaacacaaccacacaaaatcgacttgtgaggtgaggattgccc 12668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 56536 - 56480
Alignment:
Q  40 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 96  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||| ||||||||    
T  56536 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgccc 56480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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