View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9641_low_26 (Length: 208)
Name: NF9641_low_26
Description: NF9641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9641_low_26 |
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Alignment Details
Target: chr3 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 29280274 - 29280455
Alignment:
| Q |
12 |
cataggcatgaaagatgttaatgaaagaacaagagattatagttacgatgaagtcaccatttcatcagaaaactctttggaaatcacagtgagcaatgta |
111 |
Q |
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| T |
29280274 |
catatgcatgaaagatgttaatgaaagaacaagagattatagctatgatgaagtcaccatttcatcagaaaactctttggaaatcacagtgagcaatgta |
29280373 |
T |
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| Q |
112 |
attcctgcatgtcgcattttccagtcagctgaatccaagtaatatttagtcaacagttcatgagcaacagccaaaactttgt |
193 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29280374 |
attcctgcatgtcgcattttccagtcagctgaatccaagtaatatttagtcaacagttcatgagcaacagccaaaactttgt |
29280455 |
T |
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