View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9649_low_9 (Length: 381)

Name: NF9649_low_9
Description: NF9649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9649_low_9
NF9649_low_9
[»] chr7 (4 HSPs)
chr7 (23-359)||(36732639-36732977)
chr7 (154-201)||(6205407-6205454)
chr7 (154-201)||(6792779-6792826)
chr7 (212-279)||(30335740-30335807)
[»] chr5 (1 HSPs)
chr5 (75-369)||(41550089-41550384)
[»] chr1 (12 HSPs)
chr1 (111-369)||(37752402-37752660)
chr1 (128-352)||(5321467-5321690)
chr1 (110-349)||(30901773-30902016)
chr1 (127-290)||(9886377-9886540)
chr1 (156-201)||(19552755-19552800)
chr1 (154-201)||(7797868-7797915)
chr1 (154-201)||(8055142-8055189)
chr1 (154-201)||(28705316-28705363)
chr1 (154-201)||(46019186-46019233)
chr1 (154-201)||(46077336-46077383)
chr1 (154-201)||(49572822-49572869)
chr1 (154-201)||(33695937-33695984)
[»] chr8 (4 HSPs)
chr8 (75-369)||(29515112-29515404)
chr8 (158-201)||(11596891-11596934)
chr8 (154-201)||(24785153-24785200)
chr8 (154-201)||(35195792-35195839)
[»] chr6 (3 HSPs)
chr6 (234-342)||(6262016-6262124)
chr6 (75-198)||(6262130-6262254)
chr6 (50-195)||(20679159-20679305)
[»] scaffold0012 (1 HSPs)
scaffold0012 (154-201)||(109091-109138)
[»] chr4 (1 HSPs)
chr4 (154-201)||(54908301-54908348)


Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 23 - 359
Target Start/End: Complemental strand, 36732977 - 36732639
Alignment:
Q  23 gtgaggttgaaattcgcaagtta-----atcgcacttctattattgtcttatcgctgagtatgatgaacctcaaagtgtcaactacggttaatagatttt 117  Q
    |||||||||||||||||||||||     ||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||||  |||||||||||    
T  36732977 gtgaggttgaaattcgcaagttacgttaatcgcacttctatt---gtcttatcgctaagtatgatgaacctcaaagtgtcaactacgtctaatagatttt 36732881  T
Q  118 tgatacgttgaatcaacgaagtggtcgttcaactagtcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttttcagacggatatgtga 217  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||| ||||||||    
T  36732880 tgatacgctgaatcaacgaagtggtcgtccaactagtcttgcaattatttgtaaccatgttaataaacaattttgaatcactttctagacgaatatgtga 36732781  T
Q  218 aactccatcacgtcatgctagctccaaacccaaatacacaccccacatttttgcatgcagagcatcacaaacttcaattttgcgcacaaattatttgagc 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36732780 aactccatcacgtcatgctagctccaaacccaaatacacaccccacatttctgcatgcagagcatcacaaacttcaatcttgcgcacaaattatttgagc 36732681  T
Q  318 catttgtcattagtatcccgaagaagaccgccacaccccaca 359  Q
    ||||| |||||||||||| |||||||||||| ||||||||||    
T  36732680 catttatcattagtatcctgaagaagaccgcaacaccccaca 36732639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 6205454 - 6205407
Alignment:
Q  154 tcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttt 201  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||    
T  6205454 tcttgcaattatttgttatcatgtcaataagcaattttgaatcacttt 6205407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 6792779 - 6792826
Alignment:
Q  154 tcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttt 201  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||    
T  6792779 tcttgcaattatttgttatcatgtcaataagcaattttgaatcacttt 6792826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 30335807 - 30335740
Alignment:
Q  212 atgtgaaactccatcacgtcatgctagctccaaacccaaatacacaccccacatttttgcatgcagag 279  Q
    |||||||| || ||||||||| |||||||| ||||| ||||||| |||| | ||||||||||| ||||    
T  30335807 atgtgaaattctatcacgtcaagctagctctaaaccgaaatacaaacccaaaatttttgcatgaagag 30335740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 75 - 369
Target Start/End: Original strand, 41550089 - 41550384
Alignment:
Q  75 agtatgatgaacctcaaagtgtcaactacggtt-aatagatttttgatacgttgaatcaacgaagtggtcgttcaactagtcttgcaattatttgtaacc 173  Q
    ||||||||||||||||| ||| |||||||| |  || |||||| |||||||  | |||||||||| |||||| | | ||||| |||| || |||||||||    
T  41550089 agtatgatgaacctcaacgtgccaactacgatccaaaagatttctgatacgccgcatcaacgaaggggtcgtcccattagtcctgcagttgtttgtaacc 41550188  T
Q  174 atgtcaataaacaattttgaatcacttttcagacggatatgtgaaactccatcacgtcatgctagctccaaacccaaatacacaccccacatttttgcat 273  Q
    |||||||||| |||||||||||| | || || || || ||||||||||||||| || || ||||||||||| || ||||| | ||||||||||| |||||    
T  41550189 atgtcaataagcaattttgaatcgccttccacacagagatgtgaaactccatcccgccaagctagctccaaccctaaatataaaccccacatttctgcat 41550288  T
Q  274 gcagagcatcacaaacttcaattttgcgcacaaattatttgagccatttgtcattagtatcccgaagaagaccgccacaccccacatgatgtccat 369  Q
    |||||||||| |||||| |||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||| || ||| |||||    
T  41550289 gcagagcatcgcaaactccaattttgcgcacaaatcctttgagccacttgtcattagtgtcccgaagaagaccgccacaccccgcacgatttccat 41550384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 3e-58; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 111 - 369
Target Start/End: Complemental strand, 37752660 - 37752402
Alignment:
Q  111 agatttttgatacgttgaatcaacgaagtggtcgttcaactagtcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttttcagacgga 210  Q
    |||||| |||||||   |||||| |||| |||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||    
T  37752660 agatttctgatacgccaaatcaatgaaggggtcgtcccattagtcttgcaattatttgtaaccatgtcaataaacaattttgaatcactctccatacaga 37752561  T
Q  211 tatgtgaaactccatcacgtcatgctagctccaaacccaaatacacaccccacatttttgcatgcagagcatcacaaacttcaattttgcgcacaaatta 310  Q
     |||||||| ||||||||| || |||||||| ||||| ||||||| ||||||||||| |||||| ||||||||||||||  |||| ||||||||||||      
T  37752560 gatgtgaaattccatcacgccaagctagctctaaaccaaaatacaaaccccacatttctgcatgtagagcatcacaaacaccaatcttgcgcacaaatct 37752461  T
Q  311 tttgagccatttgtcattagtatcccgaagaagaccgccacaccccacatgatgtccat 369  Q
    ||||| |||| |  |||||||||||| |||||||| |||||| |||||| ||| |||||    
T  37752460 tttgaaccatctaccattagtatcccaaagaagactgccacaacccacacgatttccat 37752402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 128 - 352
Target Start/End: Complemental strand, 5321690 - 5321467
Alignment:
Q  128 aatcaacgaagtggtcgttcaactagtcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttttcagacggatatgtgaaactccatca 227  Q
    ||||||||||| |||||||| | ||||||||||||||||||||||||| ||||||| ||||||||| ||||||| || |  || |||||||| |||||||    
T  5321690 aatcaacgaaggggtcgttccattagtcttgcaattatttgtaaccatatcaataagcaattttgagtcactttccacatagagatgtgaaattccatca 5321591  T
Q  228 cgtcatgctagctccaaacccaaatacacaccccacatttttgcatgcagagcatcacaaacttcaattttgcgcacaaattatttgagccatttgtcat 327  Q
    | ||| |||||||||||| || |||||| ||| || |||| |||||| ||||||||||||||| |||| ||||| ||||||  |||||||||| ||||||    
T  5321590 cttcaagctagctccaaa-cctaatacaaacctcaaatttctgcatgaagagcatcacaaactccaatcttgcgtacaaatcctttgagccatctgtcat 5321492  T
Q  328 tagtatcccgaagaagaccgccaca 352  Q
     ||| || ||||||||||| |||||    
T  5321491 cagtgtcgcgaagaagaccaccaca 5321467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 110 - 349
Target Start/End: Complemental strand, 30902016 - 30901773
Alignment:
Q  110 tagatttttgatacgttgaatcaacgaagtggtcgttcaactagtcttgcaattatttgtaaccatgtcaataaa--caattttgaatcacttttcagac 207  Q
    ||||||| |||||||  |||||||||||  |||||| |   |||||||||||||||||||||||||||||||| |  ||||||| |||||| || || ||    
T  30902016 tagatttctgatacgccgaatcaacgaatgggtcgtcccgttagtcttgcaattatttgtaaccatgtcaatataagcaatttttaatcaccttccacac 30901917  T
Q  208 ggatatgtgaaactccatcacgtcatgctagctccaaacccaaatacacaccccacatt--tttgcatgcagagcatcacaaacttcaattttgcgcaca 305  Q
     || |||||||||||||||||| || |||||||||||||||| ||| | ||||||  ||  |||| |||||||||||||||| || |||| |||| ||||    
T  30901916 agagatgtgaaactccatcacgccaggctagctccaaacccagatataaaccccaatttaatttgtatgcagagcatcacaatctccaatcttgcacaca 30901817  T
Q  306 aattatttgagccatttgtcattagtatcccgaagaagaccgcc 349  Q
    |||| |||||| |||||| ||||| |||||||||||||||||||    
T  30901816 aattctttgagtcatttgccattactatcccgaagaagaccgcc 30901773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 127 - 290
Target Start/End: Original strand, 9886377 - 9886540
Alignment:
Q  127 gaatcaacgaagtggtcgttcaactagtcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttttcagacggatatgtgaaactccatc 226  Q
    ||||||||| || |||||| | | ||||||||||||||| | ||||||||||||| |||||||    |||||||| || ||  | |||||||| ||||||    
T  9886377 gaatcaacggaggggtcgtcccattagtcttgcaattatgtttaaccatgtcaatcaacaattcatgatcactttccacacaaagatgtgaaattccatc 9886476  T
Q  227 acgtcatgctagctccaaacccaaatacacaccccacatttttgcatgcagagcatcacaaact 290  Q
    | | || |||||||| ||||| ||||||| ||| |||||||  |||| || | |||||||||||    
T  9886477 atgacaagctagctctaaaccgaaatacagacctcacatttcagcatacaaaacatcacaaact 9886540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 19552755 - 19552800
Alignment:
Q  156 ttgcaattatttgtaaccatgtcaataaacaattttgaatcacttt 201  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||    
T  19552755 ttgcaattatttgtaaccatgtcaataactaattttgaatcacttt 19552800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 7797915 - 7797868
Alignment:
Q  154 tcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttt 201  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||    
T  7797915 tcttgcaattatttgttatcatgtcaataagcaattttgaatcacttt 7797868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 8055142 - 8055189
Alignment:
Q  154 tcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttt 201  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||    
T  8055142 tcttgcaattatttgttatcatgtcaataagcaattttgaatcacttt 8055189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 28705363 - 28705316
Alignment:
Q  154 tcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttt 201  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||    
T  28705363 tcttgcaattatttgttatcatgtcaataagcaattttgaatcacttt 28705316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 46019186 - 46019233
Alignment:
Q  154 tcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttt 201  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||    
T  46019186 tcttgcaattatttgttatcatgtcaataagcaattttgaatcacttt 46019233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 46077383 - 46077336
Alignment:
Q  154 tcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttt 201  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||||    
T  46077383 tcttgcaattatttgttatcatgacaataaacaattttgaatcacttt 46077336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 49572822 - 49572869
Alignment:
Q  154 tcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttt 201  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||    
T  49572822 tcttgcaattatttgttatcatgtcaataagcaattttgaatcacttt 49572869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 33695937 - 33695984
Alignment:
Q  154 tcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttt 201  Q
    |||||||||| ||||| ||||||||||||| || ||||||||||||||    
T  33695937 tcttgcaattttttgttaccatgtcaataagcatttttgaatcacttt 33695984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 75 - 369
Target Start/End: Original strand, 29515112 - 29515404
Alignment:
Q  75 agtatgatgaacctcaaagtgtcaactacggtt-aatagatttttgatacgttgaatcaacgaagtggtcgttcaactagtcttgcaattatttgtaacc 173  Q
    |||||||||||  |||| ||| ||||||||||  || |||||| |||||||| | |||||||||| | |||| | | ||||| |||| |||||| ||||     
T  29515112 agtatgatgaatttcaatgtgccaactacggtccaaaagatttctgatacgtcgcatcaacgaagggatcgtcccattagtcctgcagttatttctaact 29515211  T
Q  174 atgtcaataaacaattttgaatcacttttcagacggatatgtgaaactccatcacgtcatgctagctccaaacccaaatacacaccccacatttttgcat 273  Q
    |||||||||| |||||||||||| | || || ||  | ||||||||||||||  ||||| ||||||||||| | | ||||   ||||||||||| |||||    
T  29515212 atgtcaataagcaattttgaatcgccttccacacatagatgtgaaactccattccgtcaagctagctccaacctcgaata---accccacatttctgcat 29515308  T
Q  274 gcagagcatcacaaacttcaattttgcgcacaaattatttgagccatttgtcattagtatcccgaagaagaccgccacaccccacatgatgtccat 369  Q
    |||||||||| |||||| |||| |||| |||||||  ||||||| ||||| ||||||| ||  | |||||||| || ||||||||||||| |||||    
T  29515309 gcagagcatcgcaaactccaatcttgcacacaaatcctttgagcaatttgccattagtgtctaggagaagaccaccgcaccccacatgatttccat 29515404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 11596891 - 11596934
Alignment:
Q  158 gcaattatttgtaaccatgtcaataaacaattttgaatcacttt 201  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  11596891 gcaattatttgtatccatgtcaataagcaattttgaatcacttt 11596934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 24785200 - 24785153
Alignment:
Q  154 tcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttt 201  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||    
T  24785200 tcttgcaattatttgttatcatgtcaataagcaattttgaatcacttt 24785153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 35195792 - 35195839
Alignment:
Q  154 tcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttt 201  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||    
T  35195792 tcttgcaattatttgttatcatgtcaataagcaattttgaatcacttt 35195839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 6262124 - 6262016
Alignment:
Q  234 gctagctccaaacccaaatacacaccccacatttttgcatgcagagcatcacaaacttcaattttgcgcacaaattatttgagccatttgtcattagtat 333  Q
    |||||||||||||||||||||  || |||| ||| ||||||||||||||||| |||| |||| ||||||||||||   ||||| ||||||||||||||||    
T  6262124 gctagctccaaacccaaataccaacaccacgtttctgcatgcagagcatcacgaactccaatcttgcgcacaaatcccttgagtcatttgtcattagtat 6262025  T
Q  334 cccgaagaa 342  Q
    | |||||||    
T  6262024 ctcgaagaa 6262016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 75 - 198
Target Start/End: Complemental strand, 6262254 - 6262130
Alignment:
Q  75 agtatgatgaacctcaaagtgtcaactacggtt-aatagatttttgatacgttgaatcaacgaagtggtcgttcaactagtcttgcaattatttgtaacc 173  Q
    |||||||| |||||||| ||| ||||||||||  ||||||||| ||||| || |||||||| ||| |||||| | | |||||||||||||||||| ||||    
T  6262254 agtatgataaacctcaacgtgccaactacggtcgaatagatttctgatatgtcgaatcaaccaaggggtcgtaccattagtcttgcaattatttgaaacc 6262155  T
Q  174 atgtcaataaacaattttgaatcac 198  Q
    |||||||||| || |||||||||||    
T  6262154 atgtcaataagcagttttgaatcac 6262130  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 195
Target Start/End: Original strand, 20679159 - 20679305
Alignment:
Q  50 cacttctat-tattgtcttatcgctgagtatgatgaacctcaaagtgtcaactacggt-taatagatttttgatacgttgaatcaacgaagtggtcgttc 147  Q
    ||||||||| ||||| ||| ||||  ||||| ||||||||||| ||| |||||||| | || ||||||  |||||||  |||||||| ||| | |||| |    
T  20679159 cacttctatatattgccttctcgccaagtataatgaacctcaacgtgccaactacgatctagtagattcctgatacgccgaatcaacaaagggatcgtcc 20679258  T
Q  148 aactagtcttgcaattatttgtaaccatgtcaataaacaattttgaat 195  Q
       || |||||||||||||||||||||||| ||| | |||||||||||    
T  20679259 cgttaatcttgcaattatttgtaaccatgttaat-agcaattttgaat 20679305  T

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Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 109091 - 109138
Alignment:
Q  154 tcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttt 201  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||    
T  109091 tcttgcaattatttgttatcatgtcaataagcaattttgaatcacttt 109138  T

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Target: chr4 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 54908301 - 54908348
Alignment:
Q  154 tcttgcaattatttgtaaccatgtcaataaacaattttgaatcacttt 201  Q
    |||||||||||||||| | ||| ||||||| |||||||||||||||||    
T  54908301 tcttgcaattatttgttatcatatcaataagcaattttgaatcacttt 54908348  T

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