View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9651_low_1 (Length: 813)

Name: NF9651_low_1
Description: NF9651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9651_low_1
NF9651_low_1
[»] chr7 (29 HSPs)
chr7 (159-801)||(30106879-30107521)
chr7 (529-609)||(3178311-3178393)
chr7 (435-519)||(2850882-2850966)
chr7 (533-611)||(34100658-34100736)
chr7 (529-607)||(37245634-37245712)
chr7 (443-565)||(39308580-39308706)
chr7 (463-514)||(39452393-39452444)
chr7 (529-607)||(25571364-25571441)
chr7 (397-483)||(30546318-30546404)
chr7 (394-504)||(39005480-39005590)
chr7 (435-508)||(21759985-21760058)
chr7 (529-607)||(36790682-36790762)
chr7 (446-494)||(6855254-6855302)
chr7 (443-519)||(27921032-27921108)
chr7 (443-519)||(42935705-42935781)
chr7 (529-607)||(759198-759276)
chr7 (453-496)||(17609349-17609392)
chr7 (453-496)||(17609592-17609635)
chr7 (453-496)||(17609835-17609878)
chr7 (453-496)||(17610078-17610121)
chr7 (453-496)||(17610321-17610364)
chr7 (457-577)||(17610561-17610693)
chr7 (529-607)||(34947444-34947522)
chr7 (529-607)||(42935602-42935680)
chr7 (433-496)||(44180272-44180335)
chr7 (515-565)||(40614737-40614787)
chr7 (448-485)||(6611299-6611336)
chr7 (529-607)||(21350732-21350811)
chr7 (443-496)||(38391815-38391868)
[»] chr2 (21 HSPs)
chr2 (407-572)||(38187847-38188024)
chr2 (529-611)||(5272237-5272318)
chr2 (529-607)||(5789746-5789823)
chr2 (529-607)||(36354541-36354618)
chr2 (529-607)||(17695265-17695345)
chr2 (435-502)||(34120431-34120498)
chr2 (464-519)||(34225627-34225682)
chr2 (529-607)||(9458364-9458441)
chr2 (516-609)||(43410361-43410454)
chr2 (463-544)||(1206723-1206804)
chr2 (440-489)||(5528110-5528158)
chr2 (463-607)||(16463624-16463782)
chr2 (463-519)||(16805918-16805974)
chr2 (463-519)||(16845199-16845255)
chr2 (529-607)||(35313824-35313902)
chr2 (463-517)||(11367118-11367172)
chr2 (529-607)||(37322366-37322443)
chr2 (393-519)||(38763585-38763711)
chr2 (516-593)||(16028267-16028343)
chr2 (438-519)||(36354438-36354519)
chr2 (529-607)||(45235516-45235596)
[»] chr5 (20 HSPs)
chr5 (433-519)||(7827916-7828002)
chr5 (529-607)||(6753966-6754044)
chr5 (412-490)||(16319875-16319953)
chr5 (438-519)||(6753654-6753734)
chr5 (529-607)||(6315875-6315953)
chr5 (443-494)||(18890555-18890606)
chr5 (529-607)||(19929883-19929961)
chr5 (444-519)||(41062161-41062236)
chr5 (529-607)||(41496017-41496095)
chr5 (454-500)||(31299398-31299444)
chr5 (438-519)||(40530219-40530300)
chr5 (463-519)||(1248624-1248680)
chr5 (467-519)||(21060667-21060719)
chr5 (463-519)||(27580637-27580693)
chr5 (443-494)||(29412043-29412094)
chr5 (448-502)||(4441075-4441129)
chr5 (438-496)||(5129227-5129285)
chr5 (463-517)||(11761319-11761372)
chr5 (438-519)||(4818588-4818669)
chr5 (438-519)||(8493833-8493914)
[»] chr6 (23 HSPs)
chr6 (438-519)||(24983445-24983526)
chr6 (438-502)||(4581977-4582041)
chr6 (443-503)||(7072213-7072273)
chr6 (463-514)||(32440666-32440717)
chr6 (526-612)||(12307691-12307776)
chr6 (529-611)||(15058051-15058132)
chr6 (466-519)||(3291792-3291845)
chr6 (405-478)||(6698973-6699046)
chr6 (438-519)||(15058154-15058235)
chr6 (443-503)||(1063604-1063664)
chr6 (443-519)||(11655947-11656023)
chr6 (443-519)||(30716937-30717013)
chr6 (423-482)||(2423692-2423751)
chr6 (529-607)||(7920178-7920254)
chr6 (417-488)||(20526460-20526531)
chr6 (448-494)||(16464446-16464492)
chr6 (438-496)||(23397617-23397675)
chr6 (533-612)||(34299926-34300006)
chr6 (464-514)||(34300037-34300087)
chr6 (438-519)||(1781839-1781920)
chr6 (438-519)||(6834365-6834446)
chr6 (438-519)||(13087567-13087648)
chr6 (529-607)||(29363241-29363321)
[»] chr4 (31 HSPs)
chr4 (463-611)||(46396911-46397059)
chr4 (433-519)||(42517636-42517722)
chr4 (529-607)||(35311329-35311409)
chr4 (463-519)||(5841455-5841511)
chr4 (443-519)||(47773027-47773103)
chr4 (448-519)||(17512352-17512423)
chr4 (463-607)||(28500919-28501069)
chr4 (438-519)||(11907602-11907683)
chr4 (438-519)||(38405105-38405186)
chr4 (529-611)||(43237174-43237258)
chr4 (438-519)||(49428345-49428426)
chr4 (463-519)||(17114477-17114533)
chr4 (435-519)||(17237296-17237380)
chr4 (531-607)||(34360592-34360668)
chr4 (463-519)||(36985823-36985879)
chr4 (443-519)||(38502490-38502566)
chr4 (516-607)||(42616996-42617087)
chr4 (531-612)||(49176042-49176124)
chr4 (464-519)||(3689599-3689654)
chr4 (529-609)||(16821437-16821518)
chr4 (433-496)||(35380331-35380394)
chr4 (424-518)||(39157862-39157957)
chr4 (448-519)||(49746998-49747069)
chr4 (438-519)||(2066826-2066907)
chr4 (445-494)||(32469958-32470007)
chr4 (438-519)||(33790734-33790815)
chr4 (529-607)||(38405208-38405287)
chr4 (529-607)||(49746897-49746976)
chr4 (438-519)||(52859802-52859883)
chr4 (558-607)||(52859930-52859978)
chr4 (438-519)||(53412145-53412226)
[»] chr3 (21 HSPs)
chr3 (438-519)||(24569097-24569178)
chr3 (463-519)||(30190682-30190738)
chr3 (529-607)||(10366749-10366827)
chr3 (435-521)||(37772958-37773044)
chr3 (516-606)||(39043844-39043932)
chr3 (400-502)||(52206806-52206908)
chr3 (463-519)||(34750533-34750589)
chr3 (463-519)||(34957540-34957596)
chr3 (443-519)||(36476621-36476697)
chr3 (529-572)||(8679154-8679197)
chr3 (529-607)||(19822948-19823026)
chr3 (529-572)||(31158611-31158654)
chr3 (529-607)||(36460516-36460594)
chr3 (529-612)||(38795276-38795359)
chr3 (463-514)||(44301604-44301655)
chr3 (438-516)||(10366639-10366717)
chr3 (438-519)||(8679051-8679132)
chr3 (438-519)||(37311987-37312068)
chr3 (438-519)||(37695663-37695744)
chr3 (438-519)||(43253860-43253941)
chr3 (529-607)||(43253963-43254042)
[»] chr8 (26 HSPs)
chr8 (440-496)||(15809982-15810038)
chr8 (438-517)||(7703154-7703233)
chr8 (529-607)||(13335154-13335231)
chr8 (465-519)||(17719283-17719337)
chr8 (443-519)||(4924070-4924146)
chr8 (448-496)||(44648540-44648588)
chr8 (529-609)||(14855035-14855117)
chr8 (438-519)||(10179945-10180026)
chr8 (438-519)||(31271058-31271139)
chr8 (438-519)||(39482652-39482733)
chr8 (438-519)||(42972506-42972587)
chr8 (460-504)||(13831615-13831659)
chr8 (422-482)||(27966464-27966524)
chr8 (422-482)||(27976875-27976935)
chr8 (422-482)||(28034144-28034204)
chr8 (463-519)||(34393977-34394033)
chr8 (524-607)||(40109650-40109732)
chr8 (464-519)||(31082656-31082711)
chr8 (529-606)||(17719359-17719436)
chr8 (529-612)||(36006988-36007073)
chr8 (561-611)||(396742-396794)
chr8 (438-519)||(1875590-1875671)
chr8 (529-605)||(1875840-1875916)
chr8 (438-519)||(9300111-9300192)
chr8 (450-519)||(36006897-36006966)
chr8 (435-484)||(45425661-45425710)
[»] scaffold0159 (1 HSPs)
scaffold0159 (529-607)||(34119-34196)
[»] scaffold0110 (1 HSPs)
scaffold0110 (443-521)||(1739-1817)
[»] chr1 (36 HSPs)
chr1 (438-519)||(6160459-6160540)
chr1 (438-519)||(23168993-23169074)
chr1 (529-607)||(24991756-24991835)
chr1 (532-607)||(12039019-12039094)
chr1 (443-519)||(45331378-45331454)
chr1 (435-514)||(31042839-31042918)
chr1 (444-519)||(49223992-49224067)
chr1 (529-607)||(4659714-4659791)
chr1 (417-482)||(11642239-11642304)
chr1 (463-519)||(917061-917117)
chr1 (463-519)||(7351673-7351729)
chr1 (529-609)||(11449822-11449900)
chr1 (443-546)||(35538653-35538756)
chr1 (463-519)||(36701958-36702014)
chr1 (463-519)||(36718062-36718118)
chr1 (443-519)||(40144852-40144928)
chr1 (463-519)||(41121850-41121906)
chr1 (529-607)||(6785193-6785271)
chr1 (417-496)||(15444460-15444539)
chr1 (529-572)||(35682897-35682940)
chr1 (529-607)||(39864048-39864126)
chr1 (560-607)||(49224121-49224167)
chr1 (438-496)||(10495898-10495956)
chr1 (438-504)||(16395047-16395113)
chr1 (531-609)||(27721468-27721545)
chr1 (463-497)||(28092571-28092605)
chr1 (463-505)||(43614448-43614490)
chr1 (463-565)||(44122203-44122308)
chr1 (515-607)||(7759152-7759244)
chr1 (443-508)||(22181384-22181449)
chr1 (438-519)||(26093431-26093512)
chr1 (443-496)||(27687301-27687354)
chr1 (438-519)||(30754941-30755022)
chr1 (438-503)||(32970567-32970632)
chr1 (523-607)||(33733359-33733443)
chr1 (438-519)||(39864148-39864229)
[»] scaffold0294 (1 HSPs)
scaffold0294 (435-519)||(17072-17156)
[»] scaffold1809 (1 HSPs)
scaffold1809 (529-607)||(784-861)
[»] scaffold0330 (2 HSPs)
scaffold0330 (529-607)||(5329-5405)
scaffold0330 (433-519)||(5427-5513)
[»] scaffold1391 (1 HSPs)
scaffold1391 (438-519)||(1814-1895)


Alignment Details
Target: chr7 (Bit Score: 567; Significance: 0; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 567; E-Value: 0
Query Start/End: Original strand, 159 - 801
Target Start/End: Complemental strand, 30107521 - 30106879
Alignment:
Q  159 catgggttgcaaatgattagtatttgatttgagaaagaaatttaatgcacaatttggttattgtgtacatgatgaggggaaaacacagcatgctcatgtt 258  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30107521 catgggttgcaaattattagtatttgatttgagaaagaaatttaatgcacaatttggttattgtgtacatgatgaggtgaaaacacagcatgctcatgtt 30107422  T
Q  259 aattttctgctataagaagatgtg-gtcaattttaagctgatataagtcttgaagaggttggatagctcaattcgtttgagctaaaggttgaaggagttg 357  Q
    ||||||||||||||||| | |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30107421 aattttctgctataagatgttgtcagtcaattttaagctgatataagtcttgaagaggttggatagctcaattcgtttgagctaaaggttgaaggagttg 30107322  T
Q  358 aagggctcgggtttaacctagcaagttaacaacaactactccctccatctcaatttaattgtcacatttgaattttacatgattcttaagaaaataatta 457  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30107321 aagggctcgggtttaacctagcaagttaacaacaactactccctccatctcaatttagttgtcacatttgaattttacatgattcttaagaaaataatta 30107222  T
Q  458 gtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagtcaagtagagtgaaattcaataaataatggtatatgagt 557  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30107221 gtttagttgattttaatggtaaaattaatattatttacttaaatacccttatgaattatagtcaagtagagtgaaattcaataaataatggtatatgagt 30107122  T
Q  558 ggaaaaaataataaaatgttgcattagtatcctaaggtgacaattattttaagaccgatnnnnnnnntgcagaagtgactattattatgaaacagagcgg 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||    
T  30107121 ggaaaaaataataaaatgttgcattagtatcctaaggtgacaattattttaagacggat-aaaaaaatgcagaagtgactattattatgaaacagagcgg 30107023  T
Q  658 agtaattactaacaattgtttatccaatttttgttttaaacaagctaaataatataagtcatttatcctaagccatctatagtatagatacatcttcatt 757  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30107022 agtaattactaacaattgtttgtccaatttttgatttaaacaagctaaataatataagtcatttatcctaagccatctatagtatagatacatcttcatt 30106923  T
Q  758 cctatgctgaaaatcaagcacaaaacataatgaatcaagtataa 801  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30106922 cctatgctgaaaatcaagcacaaaacataatgaatcaagtataa 30106879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 3178311 - 3178393
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaa-ataataaa-atgttgcattagtatcctaaggtgacaattattttaa 609  Q
    ||||||||||||||||| ||||||| | ||| |||| |||||||| ||||||||||||||| |||| || |||||||||||||    
T  3178311 tgaaattcaataaataagggtatattaatgggaaaacataataaatatgttgcattagtattctaaagtaacaattattttaa 3178393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 435 - 519
Target Start/End: Original strand, 2850882 - 2850966
Alignment:
Q  435 catgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||||| ||||| |||| |||| ||  |||||||| |||| |||||||| ||||||||||| ||||||||| || |||||||||    
T  2850882 catgattattaaggaaatgattaattatgttgatttcaatgataaaattaatattatttactaaaataccctcattaattatagt 2850966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 533 - 611
Target Start/End: Original strand, 34100658 - 34100736
Alignment:
Q  533 attcaataaataatggtatatgagtggaaaaa-ataataaaatgttgcattagtatcctaaggtgacaattattttaaga 611  Q
    ||||||||||||| ||||||  |||| ||||| |||||||| ||||||||||||||  ||| ||||||||||||||||||    
T  34100658 attcaataaataagggtataatagtgaaaaaacataataaa-tgttgcattagtattgtaaagtgacaattattttaaga 34100736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 37245712 - 37245634
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtg-gaaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  |||| |||||||||||||| ||||||||| ||||  ||| ||||||||||||||    
T  37245712 tgaaattcaataaataagggtataatagtgagaaaaaataataaa-tgttgcattggtattgtaaagtgacaattatttt 37245634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 443 - 565
Target Start/End: Complemental strand, 39308706 - 39308580
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatga-at-ta--tagtcaagtagagtgaaattcaa 538  Q
    |||||||||| ||||| | ||||||||||||| ||||||||| ||||||||||| ||| |||| ||| | || ||  |||| |||| |||||||||||||    
T  39308706 ttaagaaaatgattagatgagttgattttaatagtaaaattaatattatttactaaaacacccctattacatgtaagtagttaagttgagtgaaattcaa 39308607  T
Q  539 taaataatggtatatgagtggaaaaaa 565  Q
    || |||| | ||||| | |||||||||    
T  39308606 tagataaagatatattaatggaaaaaa 39308580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 463 - 514
Target Start/End: Complemental strand, 39452444 - 39452393
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaatt 514  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  39452444 gttgattttaatggtaaaattaatatcatttactaaaatacccttattaatt 39452393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 25571441 - 25571364
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  | |  ||||||||||||| ||||||||| |||| |||| ||||||||||||||    
T  25571441 tgaaattcaataaataagggtataataattaaaaaaataataaa-tgttgcattggtattctaaagtgacaattatttt 25571364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 483
Target Start/End: Original strand, 30546318 - 30546404
Alignment:
Q  397 tccctccatctcaatttaattgtcacatttgaattttacatgattcttaagaaaataattagtttagttgattttaatggtaaaatt 483  Q
    ||||||| |||||||||||||||||| |||| ||| ||| || ||| ||||||||| ||||| || ||||| || ||||| ||||||    
T  30546318 tccctccgtctcaatttaattgtcacgtttggattgtacgtggttcctaagaaaatgattagattggttgagttcaatggaaaaatt 30546404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 504
Target Start/End: Complemental strand, 39005590 - 39005480
Alignment:
Q  394 tactccctccatctcaatttaattgtcacatttgaattttacatgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattattt 493  Q
    ||||| |||| |||||  |||| |||||||||||  || | |||| ||||| |  |||| ||||||| ||||||||  ||||||||||||||||| ||||    
T  39005590 tactctctccgtctcatattaagtgtcacatttgggttgtgcatggttcttgatgaaattattagttgagttgattaaaatggtaaaattagtatcattt 39005491  T
Q  494 acttaaatacc 504  Q
    ||| |||||||    
T  39005490 actaaaatacc 39005480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 435 - 508
Target Start/End: Original strand, 21759985 - 21760058
Alignment:
Q  435 catgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaataccctta 508  Q
    ||||||| |||||||||| |||| ||  ||||||||| |||||||||||||||| ||||| | ||| |||||||    
T  21759985 catgattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttaataaaacaccctta 21760058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 36790762 - 36790682
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataata--aaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  | ||||||||||||||  ||||| ||||||  ||| |||| ||||||||||||||    
T  36790762 tgaaattcaataaataagggtataataatggaaaaaataataataaatgctgcattgctattctaaagtgacaattatttt 36790682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 446 - 494
Target Start/End: Complemental strand, 6855302 - 6855254
Alignment:
Q  446 agaaaataattagtttagttgattttaatggtaaaattagtattattta 494  Q
    ||||||| ||||||| | || ||||||||||||||||||||||||||||    
T  6855302 agaaaatgattagttgaatttattttaatggtaaaattagtattattta 6855254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 519
Target Start/End: Complemental strand, 27921108 - 27921032
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||| |||| ||  |||||||||||||||||||||||||| ||||| | ||| || ||||| |||| ||||    
T  27921108 ttaagaaaatgattaattatgttgattttaatggtaaaattagtatcatttattaaaacactcttattaattgtagt 27921032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 519
Target Start/End: Complemental strand, 42935781 - 42935705
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||| |||| ||  ||||||||| |||||||||||| ||| ||||||| ||| |||||||| |||| ||||    
T  42935781 ttaagaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaattgtagt 42935705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 759198 - 759276
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtgg-aaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  | ||| |||||||||| ||||| |||||| |||| |||| ||||||||||||||    
T  759198 tgaaattcaataaataagggtataataatggaaaaaaataat-aaatgctgcattggtattctaaagtgacaattatttt 759276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 453 - 496
Target Start/End: Original strand, 17609349 - 17609392
Alignment:
Q  453 aattagtttagttgattttaatggtaaaattagtattatttact 496  Q
    ||||| || ||||||||||||||||||||||||||| |||||||    
T  17609349 aattaattgagttgattttaatggtaaaattagtataatttact 17609392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 453 - 496
Target Start/End: Original strand, 17609592 - 17609635
Alignment:
Q  453 aattagtttagttgattttaatggtaaaattagtattatttact 496  Q
    ||||| || ||||||||||||||||||||||||||| |||||||    
T  17609592 aattaattgagttgattttaatggtaaaattagtataatttact 17609635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 453 - 496
Target Start/End: Original strand, 17609835 - 17609878
Alignment:
Q  453 aattagtttagttgattttaatggtaaaattagtattatttact 496  Q
    ||||| || ||||||||||||||||||||||||||| |||||||    
T  17609835 aattaattgagttgattttaatggtaaaattagtataatttact 17609878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 453 - 496
Target Start/End: Original strand, 17610078 - 17610121
Alignment:
Q  453 aattagtttagttgattttaatggtaaaattagtattatttact 496  Q
    ||||| || ||||||||||||||||||||||||||| |||||||    
T  17610078 aattaattgagttgattttaatggtaaaattagtataatttact 17610121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 453 - 496
Target Start/End: Original strand, 17610321 - 17610364
Alignment:
Q  453 aattagtttagttgattttaatggtaaaattagtattatttact 496  Q
    ||||| || ||||||||||||||||||||||||||| |||||||    
T  17610321 aattaattgagttgattttaatggtaaaattagtataatttact 17610364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 577
Target Start/End: Original strand, 17610561 - 17610693
Alignment:
Q  457 agtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaatt------------atagtcaagtagagtgaaattcaataaata 544  Q
    |||| ||||||||||||||||||||||||||| ||||| | |||||  ||||| ||||            ||||| || |||||||||||||||||||||    
T  17610561 agttgagttgattttaatggtaaaattagtataatttattaaaatattcttattaattttaattagtgaaatagttaattagagtgaaattcaataaata 17610660  T
Q  545 atggtatatgagtggaaaaaataataaaatgtt 577  Q
      | ||||| ||||||||||||||  |||||||    
T  17610661 gggatatattagtggaaaaaataaataaatgtt 17610693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 34947522 - 34947444
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaa-taataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||| | ||||||  | ||||||||| ||||||| ||||||||| |||| |||| ||||||||||||||    
T  34947522 tgaaattcaataaatgagggtataataatggaaaaaaataataaa-tgttgcattggtattctaaagtgacaattatttt 34947444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 42935680 - 42935602
Alignment:
Q  529 tgaaattcaataaataatggtat-atgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    |||| ||||||||||||  |||| || | |||||||||||||||| ||||||||| |||| |||| ||||||||||||||    
T  42935680 tgaagttcaataaataagagtattataattggaaaaaataataaa-tgttgcatttgtattctaaagtgacaattatttt 42935602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 496
Target Start/End: Complemental strand, 44180335 - 44180272
Alignment:
Q  433 tacatgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttact 496  Q
    |||| |||| |||||||||| |||| ||  |||||||| ||||||||||||||||| |||||||    
T  44180335 tacacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtataatttact 44180272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 515 - 565
Target Start/End: Original strand, 40614737 - 40614787
Alignment:
Q  515 atagtcaagtagagtgaaattcaataaataatggtatatgagtggaaaaaa 565  Q
    ||||||||| ||||||||||||||| ||| | ||||||||||||| |||||    
T  40614737 atagtcaagaagagtgaaattcaatgaatgaaggtatatgagtgggaaaaa 40614787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 448 - 485
Target Start/End: Complemental strand, 6611336 - 6611299
Alignment:
Q  448 aaaataattagtttagttgattttaatggtaaaattag 485  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  6611336 aaaataattagtttagttgatttcaatgataaaattag 6611299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 21350732 - 21350811
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtgg--aaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  |||||  |||||||||| ||||| |||||| ||||  ||| ||||||||||||||    
T  21350732 tgaaattcaataaataagggtataatagtggaaaaaaaataat-aaatgctgcattggtattgtaaagtgacaattatttt 21350811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 496
Target Start/End: Complemental strand, 38391868 - 38391815
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttact 496  Q
    |||||||||| |||| ||  ||||||||| |||||||||||||||| |||||||    
T  38391868 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttact 38391815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 3e-16; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 407 - 572
Target Start/End: Original strand, 38187847 - 38188024
Alignment:
Q  407 tcaatttaattgtcacatttgaattttacatgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaataccct 506  Q
    ||||||||||||||||||||| | | | | || ||||||   ||||| ||||||| ||||| |||||||||||||||||| | ||||||| ||| ||||     
T  38187847 tcaatttaattgtcacatttggaatgtgcgtggttcttacagaaatatttagtttggttgactttaatggtaaaattagtttaatttactaaaacacccc 38187946  T
Q  507 tatgaattatagtca------------agtagagtgaaattcaataaataatggtatatgagtggaaaaaataataaa 572  Q
    ||| |||| |||| |            |||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  38187947 tattaattgtagttagtcgagtatgtaagtgaagtgaaattcaataaataatggtatatgagtggaaaaattaataaa 38188024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 529 - 611
Target Start/End: Original strand, 5272237 - 5272318
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattattttaaga 611  Q
    ||||||||||||||||| ||||||  | ||| |||||||||||| ||||||||| |||| |||| ||||||||||||||||||    
T  5272237 tgaaattcaataaataagggtataataatgggaaaaataataaa-tgttgcatttgtattctaaagtgacaattattttaaga 5272318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 5789746 - 5789823
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||  |||  ||| ||||||||||||||    
T  5789746 tgaaattcaataaataatggtataatagtggaaaaaataat-aaatgatgcattgatattgtaaagtgacaattatttt 5789823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 36354541 - 36354618
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||||||||||  | ||||||||||||| ||||  |||||| |||| |||| ||||||||||||||    
T  36354541 tgaaattcaataaataatggtataataatggaaaaaataat-aaattctgcattggtattctaaagtgacaattatttt 36354618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 17695345 - 17695265
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataata--aaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  ||||||||||||||||  ||||| ||||||  ||| |||| ||||||||||||||    
T  17695345 tgaaattcaataaataagggtataatagtggaaaaaataataataaatgctgcattgatattctaaagtgacaattatttt 17695265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 435 - 502
Target Start/End: Original strand, 34120431 - 34120498
Alignment:
Q  435 catgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaata 502  Q
    ||||||| |||||||||| |||| ||  ||||||||| ||||||||| |||||||||||||| |||||    
T  34120431 catgattattaagaaaatgattaattgtgttgattttgatggtaaaactagtattatttactaaaata 34120498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 464 - 519
Target Start/End: Complemental strand, 34225682 - 34225627
Alignment:
Q  464 ttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||||| |||| ||||    
T  34225682 ttgattttaatggtaaacttagtattatttactaaaacacccttattaattgtagt 34225627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 9458364 - 9458441
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||| ||||||||| ||||||  | ||||||||||||| ||||| |||||| |||| |||| ||||||||||||||    
T  9458364 tgaaatttaataaataagggtataataatggaaaaaataat-aaatgctgcattggtattctaaagtgacaattatttt 9458441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 609
Target Start/End: Complemental strand, 43410454 - 43410361
Alignment:
Q  516 tagtcaagtagagtgaaattcaataaataatggtatatgagtggaaaaaa-taataaaatgttgcattagtatcctaaggtgacaattattttaa 609  Q
    |||| |||| || ||||||||||||||| |  |||||  | ||||||||| ||||||| |||||||||||||| |||| ||||||||||||||||    
T  43410454 tagttaagttgaatgaaattcaataaatgagagtataataatggaaaaaaataataaa-tgttgcattagtattctaaagtgacaattattttaa 43410361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 463 - 544
Target Start/End: Original strand, 1206723 - 1206804
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagtcaagtagagtgaaattcaataaata 544  Q
    |||||||| | ||||||||||||||  ||||||| ||||| |||||| |||| |||| |||| |  ||||||||||||||||    
T  1206723 gttgatttcagtggtaaaattagtaacatttactaaaatatccttattaattgtagttaagttggatgaaattcaataaata 1206804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 489
Target Start/End: Original strand, 5528110 - 5528158
Alignment:
Q  440 ttcttaagaaaataattagtttagttgattttaatggtaaaattagtatt 489  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  5528110 ttcttaagaaaataattagtt-agttgatttcaatggtaaaattaatatt 5528158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 463 - 607
Target Start/End: Complemental strand, 16463782 - 16463624
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagtca-------agtagag-----tgaaattcaataaataatggta 550  Q
    ||||||||| |||||||||||||||| ||||||| ||| |||||||| |||| |||| |       |||| ||     ||||||| ||||||||||||||    
T  16463782 gttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagttagtggagtagtaaagtttgatgaaatttaataaataatggta 16463683  T
Q  551 tatgagtggaaaaaataata--aaatgttgcattagtatcctaaggtgacaattatttt 607  Q
     |  | ||||||||||||||  ||||| |||||| |||| |||| ||||||||||||||    
T  16463682 aaataatggaaaaaataataataaatgctgcattggtattctaaagtgacaattatttt 16463624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 16805974 - 16805918
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||||| ||||||||||||| ||||||| ||||| |||||| |||| ||||    
T  16805974 gttgattttaatagtaaaattagtatcatttactaaaatatccttattaattgtagt 16805918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 16845255 - 16845199
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||||| ||||||||||||| ||||||| ||||| |||||| |||| ||||    
T  16845255 gttgattttaatagtaaaattagtatcatttactaaaatatccttattaattgtagt 16845199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 35313902 - 35313824
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaa-taataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    |||||||||||||||||  |||||  ||||||||||| ||||||| |||||||||| |||  ||| ||||||||||||||    
T  35313902 tgaaattcaataaataagagtataatagtggaaaaaagtaataaa-tgttgcattattattgtaaagtgacaattatttt 35313824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 463 - 517
Target Start/End: Complemental strand, 11367172 - 11367118
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattata 517  Q
    |||||||||||| ||||||||| | | ||||||||||||||| |||| |||||||    
T  11367172 gttgattttaattgtaaaattaatgtcatttacttaaatacctttattaattata 11367118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 37322443 - 37322366
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  | ||||||||||||| ||||| | |||  |||| |||| ||||||||||||||    
T  37322443 tgaaattcaataaataagggtataataatggaaaaaataat-aaatgctacataggtattctaaagtgacaattatttt 37322366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 393 - 519
Target Start/End: Complemental strand, 38763711 - 38763585
Alignment:
Q  393 ctactccctccatctcaatttaattgtcacatttgaattttacatgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatt 492  Q
    ||||||||||| |||||| |||  |||| | ||||| ||||||| | || ||||| ||||  |||||   ||||||||||||||||||||  || | |||    
T  38763711 ctactccctccgtctcaaattaggtgtcccttttgagttttacacggttattaaggaaatggttagtagtgttgattttaatggtaaaatgtgtttcatt 38763612  T
Q  493 tacttaaatacccttatgaattatagt 519  Q
    |||| |||||| | ||| |||||||||    
T  38763611 tactaaaatactcatattaattatagt 38763585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 593
Target Start/End: Complemental strand, 16028343 - 16028267
Alignment:
Q  516 tagtcaagtagagtgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaag 593  Q
    |||| |||| ||||||||||||||||||||  |||||  |||| ||||||| || ||||||||||||| ||| |||||    
T  16028343 tagttaagtggagtgaaattcaataaataaatgtataatagtgaaaaaaattat-aaatgttgcattaatattctaag 16028267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 36354438 - 36354519
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||| |||| | |||||  ||||||||| |||||||||||||||||||||| | ||| || ||||| |||| ||||    
T  36354438 gattattaaggaaatgactagttgtgttgattttgatggtaaaattagtattatttattgaaacactcttattaattgtagt 36354519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 45235596 - 45235516
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataa--aatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| | ||||  | || ||||||||||||  ||||||||||| ||||  ||| ||||||||||||||    
T  45235596 tgaaattcaataaataaggatatagtaatgaaaaaaataataataaatgttgcattggtattataaagtgacaattatttt 45235516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 433 - 519
Target Start/End: Original strand, 7827916 - 7828002
Alignment:
Q  433 tacatgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||| ||||||||||||||| ||  |||||||| ||||||||||||||||| ||||| | |||||||||||| |||| ||||    
T  7827916 tacacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagtatcatttattaaaatacccttattaattgtagt 7828002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 6754044 - 6753966
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| |||||||   ||||||||| || ||||||||||||| ||||  ||| ||||||||||||||    
T  6754044 tgaaattcaataaataagggtatattgatggaaaaaaaaaaaaaatgttgcattggtattataaagtgacaattatttt 6753966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 490
Target Start/End: Original strand, 16319875 - 16319953
Alignment:
Q  412 ttaattgtcacatttgaattttacatgattcttaagaaaataattagtttagttgattttaatggtaaaattagtatta 490  Q
    ||||||||||| ||| | || | | |||||||||||||||||||||||| ||||||||||| |||| |||||| |||||    
T  16319875 ttaattgtcacgtttaagttgtgcgtgattcttaagaaaataattagttgagttgattttattggtgaaattaatatta 16319953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 6753654 - 6753734
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||||||||| |||| |||| || |||| ||||||||||||||||| ||||||| |||||||||||| |||| ||||    
T  6753654 gattattaagaaaatgattaattta-ttaatttcaatggtaaaattagtatcatttactaaaatacccttattaattgtagt 6753734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 6315875 - 6315953
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaa-aataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  | ||||||| ||||||||| ||||||||| |||| |||| ||||||||||||||    
T  6315875 tgaaattcaataaataagggtataataatggaaaataataataaa-tgttgcattggtattctaaagtgacaattatttt 6315953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 443 - 494
Target Start/End: Original strand, 18890555 - 18890606
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattattta 494  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||| |||||    
T  18890555 ttaagaaaatgattagttgagttgtttttaatggtaaaattagtatcattta 18890606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 19929961 - 19929883
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaa-aataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  | ||||||| ||||||||| ||||||||| |||| |||| ||||||||||||||    
T  19929961 tgaaattcaataaataagggtataataatggaaaataataataaa-tgttgcattggtattctaaagtgacaattatttt 19929883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 444 - 519
Target Start/End: Original strand, 41062161 - 41062236
Alignment:
Q  444 taagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||||||| ||  ||||||||| ||| |||||||||||| ||||||| ||| |||||||| |||| ||||    
T  41062161 taagaaaataattaattatgttgattttgatgataaaattagtatcatttactaaaacacccttattaattgtagt 41062236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 41496095 - 41496017
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaa-aataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    |||||| |||||||||| ||||||  ||||||||| ||||||||| ||||||||||||||  ||| ||||||||||||||    
T  41496095 tgaaatgcaataaataaaggtataatagtggaaaagaataataaa-tgttgcattagtattgtaaagtgacaattatttt 41496017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 454 - 500
Target Start/End: Complemental strand, 31299444 - 31299398
Alignment:
Q  454 attagtttagttgattttaatggtaaaattagtattatttacttaaa 500  Q
    |||||||||||| ||||||||||||||||| || |||||||||||||    
T  31299444 attagtttagttaattttaatggtaaaatttgtgttatttacttaaa 31299398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 40530219 - 40530300
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||||||||| |||| ||  |||||||| ||||||||||||||||  ||||||| ||| |||||||| |||| ||||    
T  40530219 gattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgtagt 40530300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 519
Target Start/End: Original strand, 1248624 - 1248680
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||| ||||||||||||| ||| ||||||| |||||||||||| |||| ||||    
T  1248624 gttgatttcaatggtaaaattaatatcatttactaaaatacccttattaattgtagt 1248680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 467 - 519
Target Start/End: Complemental strand, 21060719 - 21060667
Alignment:
Q  467 attttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||| |||||||||||||||||||||||| |||||| ||||| |||| ||||    
T  21060719 attttgatggtaaaattagtattatttactaaaatactcttattaattgtagt 21060667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 27580693 - 27580637
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||| ||||||||||||| ||| ||||||| |||||||||||| |||| ||||    
T  27580693 gttgatttcaatggtaaaattaatatcatttactaaaatacccttattaattgtagt 27580637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 443 - 494
Target Start/End: Original strand, 29412043 - 29412094
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattattta 494  Q
    |||| |||||||||||||   ||||||||||||||||||||||||| |||||    
T  29412043 ttaaaaaaataattagttcgattgattttaatggtaaaattagtatgattta 29412094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 448 - 502
Target Start/End: Complemental strand, 4441129 - 4441075
Alignment:
Q  448 aaaataattagtttagttgattttaatggtaaaattagtattatttacttaaata 502  Q
    |||||||||| ||  ||||||||||||| |||||||| ||||||||||| |||||    
T  4441129 aaaataattaattgtgttgattttaatgataaaattaatattatttactaaaata 4441075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 496
Target Start/End: Original strand, 5129227 - 5129285
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttact 496  Q
    |||||||||||||||||||||||   ||| ||| ||||||||||||| ||| |||||||    
T  5129227 gattcttaagaaaataattagttgcattggtttgaatggtaaaattaatataatttact 5129285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 463 - 517
Target Start/End: Original strand, 11761319 - 11761372
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattata 517  Q
    |||||||||||||||||||||||||| | ||||| |||||| ||||| |||||||    
T  11761319 gttgattttaatggtaaaattagtatca-ttactaaaatactcttataaattata 11761372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Complemental strand, 4818669 - 4818588
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||| ||||||||| ||  |||||||| ||| ||||||||||||  ||||||| ||| |||||||| |||| ||||    
T  4818669 gattattaaggaaataattaattgtgttgatttcaattgtaaaattagtagcatttactaaaacacccttattaattgtagt 4818588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 8493833 - 8493914
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||||| ||||||||||  ||| |||| ||| ||||||||||||| ||||| | | |||| ||||| |||| ||||    
T  8493833 gattcttaagaatataattagttgggttaatttcaatcgtaaaattagtatgatttattaatatactcttattaattttagt 8493914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 24983445 - 24983526
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||| |||| ||||||| ||||||||| ||||||||||||||| | ||||||| ||| |||||||| |||| ||||    
T  24983445 gattcttaaggaaatgattagttgagttgatttcaatggtaaaattagtgtcatttactaaaacacccttattaattgtagt 24983526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 438 - 502
Target Start/End: Original strand, 4581977 - 4582041
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaata 502  Q
    |||||||| |||||||||||| |  |||||||||||||||||||||| ||| ||||||| |||||    
T  4581977 gattcttatgaaaataattagctgtgttgattttaatggtaaaattaatatcatttactaaaata 4582041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 443 - 503
Target Start/End: Complemental strand, 7072273 - 7072213
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatac 503  Q
    ||||||||||||||| ||  |||||||||||||||||||||||| | ||||||| ||||||    
T  7072273 ttaagaaaataattaattgtgttgattttaatggtaaaattagtgtcatttactgaaatac 7072213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 463 - 514
Target Start/End: Original strand, 32440666 - 32440717
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaatt 514  Q
    ||||||||| |||||||||||||||||||||||| ||| |||||||| ||||    
T  32440666 gttgattttgatggtaaaattagtattatttactaaaacacccttattaatt 32440717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 612
Target Start/End: Original strand, 12307691 - 12307776
Alignment:
Q  526 gagtgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattattttaagac 612  Q
    ||||||||||||||||||||   ||||| ||| ||||||||||| |||||||| |||| |||  ||| |||||||||||||| ||||    
T  12307691 gagtgaaattcaataaataagaatatattagttgaaaaaataat-aaatgttgtattaatattttaaagtgacaattattttgagac 12307776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 15058132 - 15058051
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattattttaaga 611  Q
    ||||||||||||||||| ||||||  |||  |||||||||| |||||||||||  ||||  ||| ||||||||||||||||||    
T  15058132 tgaaattcaataaataagggtataatagtacaaaaaataat-aaatgttgcatcggtattataaagtgacaattattttaaga 15058051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 466 - 519
Target Start/End: Original strand, 3291792 - 3291845
Alignment:
Q  466 gattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||||||| |||||||||||||||| ||||||| |||| |||| ||||    
T  3291792 gattttaatggtaatattagtattatttactaaaatacctttattaattgtagt 3291845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 405 - 478
Target Start/End: Complemental strand, 6699046 - 6698973
Alignment:
Q  405 tctcaatttaattgtcacatttgaattttacatgattcttaagaaaataattagtttagttgattttaatggta 478  Q
    |||||| |||||  || ||||||||||||||||| || ||||||||||||||| |   ||||||||||||||||    
T  6699046 tctcaaattaataatctcatttgaattttacatggttattaagaaaataattaatagtgttgattttaatggta 6698973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 519
Target Start/End: Complemental strand, 15058235 - 15058154
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||||||||| |||| || |||| |||| |||||||||||||||   ||||||| |||||||||||| |||| ||||    
T  15058235 gattattaagaaaatgattaattaagttaatttcaatggtaaaattagtggcatttactaaaatacccttattaattgtagt 15058154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 503
Target Start/End: Original strand, 1063604 - 1063664
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatac 503  Q
    |||||||||| |||| ||  |||||||| |||| |||||||||||||||||||| ||||||    
T  1063604 ttaagaaaatgattaattgtgttgatttcaatgataaaattagtattatttactaaaatac 1063664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 519
Target Start/End: Original strand, 11655947 - 11656023
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||| |||| ||  ||||||||| |||||||||||||| | ||||||| ||| |||||||| |||| ||||    
T  11655947 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtgtcatttactaaaacacccttattaattgtagt 11656023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 519
Target Start/End: Complemental strand, 30717013 - 30716937
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||| |||| |||| |||  |||| ||| |||||||||||||||| ||||||||||| |||||||| |||| ||||    
T  30717013 ttaaggaaatgattaattttattgactttgatggtaaaattagtatcatttacttaaacacccttattaattgtagt 30716937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 482
Target Start/End: Complemental strand, 2423751 - 2423692
Alignment:
Q  423 atttgaattttacatgattcttaagaaaataattagtttagttgattttaatggtaaaat 482  Q
    |||| |||||||||||||| || ||||||| |||| | | ||||||||||||||||||||    
T  2423751 atttaaattttacatgattattcagaaaatgattaatattgttgattttaatggtaaaat 2423692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 7920254 - 7920178
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||||||||||  ||||  ||||||||  ||||||||||||  ||| |||| |||| |||||||||    
T  7920254 tgaaattcaataaataatggtataatagtg--aaaaataaataaatgttgcattgatattctaaagtgataattatttt 7920178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 488
Target Start/End: Original strand, 20526460 - 20526531
Alignment:
Q  417 tgtcacatttgaattttacatgattcttaagaaaataattagtttagttgattttaatggtaaaattagtat 488  Q
    |||||||||||| || |||||  |||| |||||||| |||| ||| |||||||||||| ||||||| |||||    
T  20526460 tgtcacatttgagttgtacattgttctcaagaaaatgattaatttggttgattttaatagtaaaataagtat 20526531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 448 - 494
Target Start/End: Complemental strand, 16464492 - 16464446
Alignment:
Q  448 aaaataattagtttagttgattttaatggtaaaattagtattattta 494  Q
    ||||| |||| ||| |||||||||||||||||||||| |||||||||    
T  16464492 aaaattattactttggttgattttaatggtaaaattaatattattta 16464446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 496
Target Start/End: Original strand, 23397617 - 23397675
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttact 496  Q
    |||||||| |||||| |||| || ||||||||| ||||||||||||||| | |||||||    
T  23397617 gattcttatgaaaattattacttgagttgatttaaatggtaaaattagtgtaatttact 23397675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 533 - 612
Target Start/End: Complemental strand, 34300006 - 34299926
Alignment:
Q  533 attcaataaataatggtatatgagtggaaa--aaataataaaatgttgcattagtatcctaaggtgacaattattttaagac 612  Q
    ||||||||||||| | ||||| ||||||||  |||||||||| ||||| |||  ||| |||| |||||||||||||||||||    
T  34300006 attcaataaataaggatatattagtggaaagaaaataataaa-tgttgtattgatattctaaagtgacaattattttaagac 34299926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 464 - 514
Target Start/End: Complemental strand, 34300087 - 34300037
Alignment:
Q  464 ttgattttaatggtaaaattagtattatttacttaaatacccttatgaatt 514  Q
    ||||||| |||| |||||||||||||||||||| ||||| |||||| ||||    
T  34300087 ttgatttgaatgataaaattagtattatttactaaaatatccttattaatt 34300037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Complemental strand, 1781920 - 1781839
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||||||||| |||| ||  |||||| | ||||||||||||||||  ||||||| ||| |||||||| |||| ||||    
T  1781920 gattgttaagaaaatgattaattatgttgatctcaatggtaaaattagtagcatttactaaaacacccttattaattgtagt 1781839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 6834365 - 6834446
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||||||||||||| ||  ||||||||| || || |||||| ||| ||||||| ||| ||| |||| |||||||||    
T  6834365 gattattaagaaaataattaattgtgttgattttgatagtcaaattaatatcatttactaaaacacctttattaattatagt 6834446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Complemental strand, 13087648 - 13087567
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||||||| | |||| ||  |||||||| ||||||||||||| ||| ||||||| ||| | |||||| |||||||||    
T  13087648 gattattaagaaagtgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaacatccttattaattatagt 13087567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 29363321 - 29363241
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataata--aaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    |||||||||||||||||  |||||  | ||||||||||||||  ||||| |||||| |||| || | ||||||||||||||    
T  29363321 tgaaattcaataaataagagtataataatggaaaaaataataataaatgctgcattggtattctgaagtgacaattatttt 29363241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 463 - 611
Target Start/End: Original strand, 46396911 - 46397059
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagtcaagtagagtgaaattcaataaataatggtatatgagtggaaa 562  Q
    |||||||| ||||||||||||| ||  ||||||| ||| || ||||| |||| |||| |||| |  | ||||||| ||||||| ||||||  | ||||||    
T  46396911 gttgatttcaatggtaaaattaatagcatttactaaaacactcttattaattgtagttaagttggataaaattcattaaataagggtataataatggaaa 46397010  T
Q  563 aaa-taataaaatgttgcattagtatcctaaggtgacaattattttaaga 611  Q
    ||| |||| |||||||| ||| ||||| ||| ||||||||||||||||||    
T  46397011 aaactaat-aaatgttgtattcgtatcgtaaagtgacaattattttaaga 46397059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 433 - 519
Target Start/End: Original strand, 42517636 - 42517722
Alignment:
Q  433 tacatgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||| |||||||||| |||| ||  |||||||| |||||||||||||  || ||||||| |||||||||||| |||||||||    
T  42517636 tacacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaagatcatttactaaaatacccttattaattatagt 42517722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 35311329 - 35311409
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataata--aaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  | ||||||||||||||  |||||||||||| ||||  ||| ||||||||||||||    
T  35311329 tgaaattcaataaataaaggtataatattggaaaaaataataataaatgttgcattggtattgtaaagtgacaattatttt 35311409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 463 - 519
Target Start/End: Original strand, 5841455 - 5841511
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||||| |||| ||||    
T  5841455 gttgattttaatggtaaaattaatatcatttactaaaatacccttattaattgtagt 5841511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 443 - 519
Target Start/End: Original strand, 47773027 - 47773103
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||| ||||||||| ||  ||||||||| |||||||||||||||| ||||||| ||| |||||||| |||| ||||    
T  47773027 ttaaggaaataattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagt 47773103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 448 - 519
Target Start/End: Original strand, 17512352 - 17512423
Alignment:
Q  448 aaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||| ||||||| |||||||||||| |||||||||| ||| ||||||| ||||||| |||| |||| ||||    
T  17512352 aaaatgattagttgagttgattttaaaggtaaaattaatataatttactaaaataccattattaattgtagt 17512423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 463 - 607
Target Start/End: Original strand, 28500919 - 28501069
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaatt----atagtcaagtagagtgaaattcaataaataatggtatatgagtg 558  Q
    |||||||| ||||||||||||| ||| ||||||| |||||||||||| ||||     |||| ||||    ||||||||||||||||| ||||||  | ||    
T  28500919 gttgatttcaatggtaaaattaatatcatttactaaaatacccttattaattgcagttagttaagtttgatgaaattcaataaataagggtataataatg 28501018  T
Q  559 gaaaaaataata--aaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    | ||||| ||||  |||||||| ||| |||| |||| | ||||||||||||    
T  28501019 ggaaaaaaaataataaatgttgtattggtattctaaagagacaattatttt 28501069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 11907602 - 11907683
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||| |||| |||| ||  ||||||||| |||||||||||||||| ||||||| ||| |||||||| |||| ||||    
T  11907602 gattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagt 11907683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 38405105 - 38405186
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||| |||| |||| ||  |||||||| ||||||||||||| ||| ||||||| |||||||||||| |||| ||||    
T  38405105 gattattaaggaaatgattaattctgttgatttaaatggtaaaattaatatcatttactaaaatacccttattaattgtagt 38405186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 43237258 - 43237174
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataata--aaatgttgcattagtatcctaaggtgacaattattttaaga 611  Q
    |||||||||||||||||  |||||  |||| |||||||||||  |||||||||||||||| | ||| |||||| | |||||||||    
T  43237258 tgaaattcaataaataagtgtataatagtgaaaaaaataataataaatgttgcattagtaccgtaaagtgacactcattttaaga 43237174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 49428345 - 49428426
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||| |||| |||| ||  |||||||| ||||||||||||| ||| ||||||| |||||||||||| |||| ||||    
T  49428345 gattattaaggaaatgattatttgtgttgatttcaatggtaaaattaatataatttactaaaatacccttattaattgtagt 49428426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 17114533 - 17114477
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||||||| |||||||||||||||| ||||||| ||| |||||||| |||| ||||    
T  17114533 gttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagt 17114477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 435 - 519
Target Start/End: Original strand, 17237296 - 17237380
Alignment:
Q  435 catgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||||| ||||||||||||||| ||  |||||||  ||||||||||||||||  ||||||| ||| | |||||| |||| ||||    
T  17237296 catgattattaagaaaataattaattgtgttgattgcaatggtaaaattagtaacatttactaaaacaaccttattaattgtagt 17237380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 531 - 607
Target Start/End: Complemental strand, 34360668 - 34360592
Alignment:
Q  531 aaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||| ||||||  ||||||||||| || ||||||||  ||| ||||  ||| ||||||||||||||    
T  34360668 aaattcaataaataagggtataatagtggaaaaaaaaaaaaaatgttaaattggtattgtaaagtgacaattatttt 34360592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 36985879 - 36985823
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||| ||||||||||||||||| ||||||| |||||||| ||| |||| ||||    
T  36985879 gttgatttcaatggtaaaattagtatcatttactaaaatacccgtattaattgtagt 36985823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 519
Target Start/End: Original strand, 38502490 - 38502566
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||| ||||||||| ||  ||||||||| |||||||||||||||| ||||| | ||||||  |||| |||||||||    
T  38502490 ttaaggaaataattaattgtgttgattttgatggtaaaattagtatcatttattaaaatacttttattaattatagt 38502566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 607
Target Start/End: Original strand, 42616996 - 42617087
Alignment:
Q  516 tagtcaagtagagtgaaattcaataaataatggtatatgagtggaaaa-aataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    |||| |||| || |||||||||||||||||  |||||  | ||||||| ||||||||| ||||||||| |||| |||| ||||||||||||||    
T  42616996 tagttaagtcgaatgaaattcaataaataagtgtataataatggaaaataataataaa-tgttgcatttgtattctaaagtgacaattatttt 42617087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 531 - 612
Target Start/End: Original strand, 49176042 - 49176124
Alignment:
Q  531 aaattcaataaataatggtatatgagtgg--aaaaaataataaaatgttgcattagtatcctaaggtgacaattattttaagac 612  Q
    ||||||||||||||| ||||||  |||||  ||||||||||||  ||||||||| |||| |||| |||||||||||||| ||||    
T  49176042 aaattcaataaataagggtataatagtgggaaaaaaataataat-tgttgcattggtattctaaagtgacaattattttgagac 49176124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Complemental strand, 3689654 - 3689599
Alignment:
Q  464 ttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||| |||||||||||||||| ||||||| ||| || ||||| |||||||||    
T  3689654 ttgattttgatggtaaaattagtatcatttactaaaacactcttattaattatagt 3689599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 16821437 - 16821518
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataa--aatgttgcattagtatcctaaggtgacaattattttaa 609  Q
    ||||||||||||||||| ||||||  |||| ||||| ||||||  |||| |||||| |||| |||| ||||||||||||||||    
T  16821437 tgaaattcaataaataagggtataatagtgcaaaaa-taataataaatgctgcattggtattctaaagtgacaattattttaa 16821518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 496
Target Start/End: Original strand, 35380331 - 35380394
Alignment:
Q  433 tacatgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttact 496  Q
    |||| |||| |||||||||| |||| ||  |||||||||||||||||||||||||  |||||||    
T  35380331 tacacgattattaagaaaatgattaattatgttgattttaatggtaaaattagtagcatttact 35380394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 518
Target Start/End: Original strand, 39157862 - 39157957
Alignment:
Q  424 tttgaattttacatgattcttaagaaaataattagtttagttga-ttttaatggtaaaattagtattatttacttaaatacccttatgaattatag 518  Q
    ||||| ||||||| |||| |||||||||| |||||||  ||| | |||| ||||||||||| || | ||||||| |||||| ||||| ||||||||    
T  39157862 tttgagttttacacgattattaagaaaatgattagttgtgtttaattttgatggtaaaatttgtttcatttactaaaatacacttattaattatag 39157957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 519
Target Start/End: Complemental strand, 49747069 - 49746998
Alignment:
Q  448 aaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||| ||  |||||||| |||| ||||||||||| |||||||| ||||||| | || |||||||||    
T  49747069 aaaataattaattgtgttgatttcaatgataaaattagtagtatttactaaaataccttcattaattatagt 49746998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Complemental strand, 2066907 - 2066826
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||| |||| |||| ||  ||||||||| |||||||| ||||||||||||| | ||| |||||||| |||| ||||    
T  2066907 gattattaaggaaatgattaattgtgttgattttgatggtaaagttagtattatttattaaaacacccttattaattttagt 2066826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 445 - 494
Target Start/End: Original strand, 32469958 - 32470007
Alignment:
Q  445 aagaaaataattagtttagttgattttaatggtaaaattagtattattta 494  Q
    |||||||| |||| ||  |||||||||||||||||||||||||| |||||    
T  32469958 aagaaaatgattaattgtgttgattttaatggtaaaattagtatcattta 32470007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 33790734 - 33790815
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||||||||| |||| ||  ||||||||| |||||||||||||| | |||| || ||| |||||||| |||| ||||    
T  33790734 gattattaagaaaatgattaattgtgttgattttgatggtaaaattagtttcatttgctaaaacacccttattaattgtagt 33790815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 38405208 - 38405287
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaa--taataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  | |||||||||  |||| ||||||||||||  ||| |||| ||||||||||||||    
T  38405208 tgaaattcaataaataaaggtataataatggaaaaaaagtaat-aaatgttgcattgctattctaaagtgacaattatttt 38405287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 49746976 - 49746897
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataa--aatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  | |||||||| ||||||  ||||||||||| ||||  ||| ||||||||||||||    
T  49746976 tgaaattcaataaataagggtataataatggaaaaa-taataataaatgttgcattggtattgtaaagtgacaattatttt 49746897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 52859802 - 52859883
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||| |||| |||| ||  ||||||||| |||||||||||||||| ||||||| ||| | |||||| |||| ||||    
T  52859802 gattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacatccttattaattgtagt 52859883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 607
Target Start/End: Original strand, 52859930 - 52859978
Alignment:
Q  558 ggaaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||| ||||||||| |||| |||| ||||||||||||||    
T  52859930 ggaaaaaataataaa-tgttgcattggtattctaaagtgacaattatttt 52859978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Complemental strand, 53412226 - 53412145
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||||||||  |||| |||  ||||||| ||||||||||||||||| ||||||| |||||   |||| |||||||||    
T  53412226 gatttttaagaaaacgattaattttattgatttcaatggtaaaattagtatcatttactaaaatatttttattaattatagt 53412145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 24569097 - 24569178
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||||||||| |||| ||  |||||||| ||||||||||||| ||||||||||| |||||||||||| |||| ||||    
T  24569097 gattattaagaaaatgattaattgtgttgatttcaatggtaaaattaatattatttactaaaatacccttattaattgtagt 24569178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 463 - 519
Target Start/End: Original strand, 30190682 - 30190738
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||| |||| ||||    
T  30190682 gttgatttcaatggtaaaattagtatcatttactaaaatacccttattaattgtagt 30190738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 10366749 - 10366827
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtgg-aaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  | ||| ||||||||||||| ||||||||| |||| |||| ||||||||||||||    
T  10366749 tgaaattcaataaataagggtataataatgggaaaaaataataaa-tgttgcattggtattctaaagtgacaattatttt 10366827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 435 - 521
Target Start/End: Original strand, 37772958 - 37773044
Alignment:
Q  435 catgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagtca 521  Q
    ||||||| ||||| |||| |||| ||   ||||||  ||||||||||||| ||| ||||||| |||||||||||| |||||||||||    
T  37772958 catgattattaaggaaatgattaattgtattgattacaatggtaaaattaatatcatttactaaaatacccttattaattatagtca 37773044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 606
Target Start/End: Original strand, 39043844 - 39043932
Alignment:
Q  516 tagtcaagtagagtgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattattt 606  Q
    |||| |||| || ||||||||||||||||| ||||||  | || ||||||||||||| ||||||||| |||| |||| |||||||||||||    
T  39043844 tagttaagttgaatgaaattcaataaataagggtataataatg-aaaaaataataaa-tgttgcattggtattctaaagtgacaattattt 39043932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 502
Target Start/End: Original strand, 52206806 - 52206908
Alignment:
Q  400 ctccatctcaatttaattgtcacatttgaattttacatgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaa 499  Q
    |||| ||||| |||||| ||||  ||| |||| | ||| ||||||||| |||| ||||||| | ||||||| ||||||||||||| ||| ||||||| ||    
T  52206806 ctccgtctcattttaatagtcatttttcaattgtgcattattcttaaggaaatgattagttaaattgatttcaatggtaaaattaatatcatttactaaa 52206905  T
Q  500 ata 502  Q
    |||    
T  52206906 ata 52206908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 34750589 - 34750533
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||||||||||||||||||| ||||||| ||| | |||||| |||| ||||    
T  34750589 gttgattttaatggtaaaattagtatcatttactaaaacatccttattaattgtagt 34750533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 34957596 - 34957540
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||| ||| ||||||||||| |||| ||||||||||||| |||||| |||||||||    
T  34957596 gttgaatttgatggtaaaatttgtataatttacttaaatatccttattaattatagt 34957540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 519
Target Start/End: Complemental strand, 36476697 - 36476621
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||||||||||||  ||  |||||||  ||||||||||||| ||| ||||||| |||||||||||| |||| ||||    
T  36476697 ttaagaaaataattgattgtgttgattgcaatggtaaaattaatatcatttactaaaatacccttattaattgtagt 36476621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 572
Target Start/End: Original strand, 8679154 - 8679197
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaa 572  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||    
T  8679154 tgaaattcaataaataagggtataatagtggaaaaaataataaa 8679197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 19823026 - 19822948
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcct-aaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||| | || |||||||||| ||||| |||||| |||| || || ||||||||||||||    
T  19823026 tgaaattcaataaataagggtatattaatgaaaaaaataat-aaatgctgcattggtattctaaaagtgacaattatttt 19822948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 572
Target Start/End: Original strand, 31158611 - 31158654
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaa 572  Q
    ||||||||||||||||||||||||  |||| |||||||||||||    
T  31158611 tgaaattcaataaataatggtataatagtgaaaaaaataataaa 31158654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 36460516 - 36460594
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaa-aaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  |||||||| ||||||| |||| |||||||  |||| ||| ||||||||||||||    
T  36460516 tgaaattcaataaataagggtataatagtggaaacaaataat-aaatattgcattgatatcgtaaagtgacaattatttt 36460594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 612
Target Start/End: Complemental strand, 38795359 - 38795276
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattattttaagac 612  Q
    ||||||| |||||| || || |||  ||||||||| | |||||||| ||||||| |||| |||| |||||||||||||| ||||    
T  38795359 tgaaatttaataaaaaagggcataatagtggaaaataaaataaaatattgcattggtattctaaagtgacaattattttgagac 38795276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 514
Target Start/End: Complemental strand, 44301655 - 44301604
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaatt 514  Q
    |||||||| |||| |||||||||||| ||||||| |||||||||||| ||||    
T  44301655 gttgatttcaatgataaaattagtatcatttactaaaatacccttatcaatt 44301604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 516
Target Start/End: Original strand, 10366639 - 10366717
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattat 516  Q
    |||| |||||||||| |||| ||  |||||||| ||||||||||||||||| ||||| | ||| || ||||| ||||||    
T  10366639 gattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtatcatttattaaaacactcttattaattat 10366717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 8679051 - 8679132
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||| |||| |||| ||  |||||||| ||||||||||||||||  ||||||| ||| | |||||| |||||||||    
T  8679051 gattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaagatccttattaattatagt 8679132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Complemental strand, 37312068 - 37311987
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||| |||| |||| ||  |||||||| ||||||||||||||||  ||||||| ||| |||||||| |||| ||||    
T  37312068 gattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaaaacccttattaattgtagt 37311987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 37695663 - 37695744
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||| |||| |||| ||  |||||||| ||||||||||||| ||| ||||||| ||| |||||||| |||| ||||    
T  37695663 gattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaacacccttattaattgtagt 37695744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 43253860 - 43253941
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||| |||| |||| ||  |||||||| ||||||||||||||||  ||||||| ||| |||||||| |||| ||||    
T  43253860 gattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgtagt 43253941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 43253963 - 43254042
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaa--taataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||| ||||||| ||||||  |||||||||||  |||| |||||||||||| ||||  ||| ||||||||||||||    
T  43253963 tgaaattcattaaataagggtataatagtggaaaaaaactaat-aaatgttgcattggtattgtaaagtgacaattatttt 43254042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 440 - 496
Target Start/End: Original strand, 15809982 - 15810038
Alignment:
Q  440 ttcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttact 496  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||||    
T  15809982 ttcttaagaaaatgattagttcagttgattttaatggtagaattaatattatttact 15810038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 438 - 517
Target Start/End: Original strand, 7703154 - 7703233
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattata 517  Q
    |||| ||||| ||||||||| ||  |||||||| ||||||||||||| ||| ||||||| |||||||||||| |||||||    
T  7703154 gattattaaggaaataattaattgtgttgatttcaatggtaaaattaatatcatttactaaaatacccttattaattata 7703233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 13335231 - 13335154
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||| | ||||||  | |||||||||||||||| ||||||||| |||| |||| ||||||||||||||    
T  13335231 tgaaattcaataaatcagggtataataatggaaaaaataataaa-tgttgcattggtattctaaagtgacaattatttt 13335154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 465 - 519
Target Start/End: Original strand, 17719283 - 17719337
Alignment:
Q  465 tgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||||||||| ||||||||||||||| ||||| |||||| |||||||||    
T  17719283 tgattttaatggtaaagttagtattatttactaaaatatccttattaattatagt 17719337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 443 - 519
Target Start/End: Original strand, 4924070 - 4924146
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||| |||||||  ||  |||||||||||||||||||||||||||||| ||||| | |||| |||| ||||    
T  4924070 ttaagaaaattattagttgtgtatattttaatggtaaaattagtattatttactaaaatatctttattaattgtagt 4924146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 448 - 496
Target Start/End: Original strand, 44648540 - 44648588
Alignment:
Q  448 aaaataattagtttagttgattttaatggtaaaattagtattatttact 496  Q
    ||||| ||||||||||||||||| ||||||||||||||||| |||||||    
T  44648540 aaaatgattagtttagttgatttcaatggtaaaattagtatcatttact 44648588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 14855035 - 14855117
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataata--aaatgttgcattagtatcctaaggtgacaattattttaa 609  Q
    |||||||||||||| |||||||||  ||||||||||| ||||  |||| |||||||| |||  ||| ||||||||||||||||    
T  14855035 tgaaattcaataaagaatggtataatagtggaaaaaaaaataataaatattgcattaatattgtaaagtgacaattattttaa 14855117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 10179945 - 10180026
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||||||||| | |||||   ||||||| ||||||||||||||||| ||||||| |||||| ||||| |||| ||||    
T  10179945 gattattaagaaaatgagtagttgtattgatttcaatggtaaaattagtataatttactaaaatacacttattaattgtagt 10180026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 519
Target Start/End: Complemental strand, 31271139 - 31271058
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||||||||| |||  ||  |||||||||||||||||||||| ||| || |||| |||||| ||||| |||||||||    
T  31271139 gattattaagaaaatgattgattgtgttgattttaatggtaaaattaatatcatatactaaaatactcttattaattatagt 31271058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 519
Target Start/End: Complemental strand, 39482733 - 39482652
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||||||||| |||| ||  |||||||| || |||||||||||||  ||||||| ||| |||||||| |||||||||    
T  39482733 gattattaagaaaatgattaattgtgttgatttcaagggtaaaattagtagaatttactaaaacacccttattaattatagt 39482652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 42972506 - 42972587
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||||||||| |||| ||   ||||||| ||||||||||||| |||  |||||| |||||||||||| |||||||||    
T  42972506 gattattaagaaaatgattaattgttttgatttcaatggtaaaattaatatcgtttactaaaatacccttattaattatagt 42972587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 460 - 504
Target Start/End: Original strand, 13831615 - 13831659
Alignment:
Q  460 ttagttgattttaatggtaaaattagtattatttacttaaatacc 504  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||    
T  13831615 ttagttgattttaatggtaaaattaatattatttattaaaatacc 13831659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 27966524 - 27966464
Alignment:
Q  422 catttgaattttacatgattcttaagaaaataattagtttagttgattttaatggtaaaat 482  Q
    |||||||  |||||||||||  |||||||||||||| || |||| ||||||||||||||||    
T  27966524 catttgagatttacatgattaataagaaaataattaattgagttaattttaatggtaaaat 27966464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 27976935 - 27976875
Alignment:
Q  422 catttgaattttacatgattcttaagaaaataattagtttagttgattttaatggtaaaat 482  Q
    |||||||  |||||||||||  |||||||||||||| || |||| ||||||||||||||||    
T  27976935 catttgagatttacatgattaataagaaaataattaattgagttaattttaatggtaaaat 27976875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 28034204 - 28034144
Alignment:
Q  422 catttgaattttacatgattcttaagaaaataattagtttagttgattttaatggtaaaat 482  Q
    |||||||  |||||||||||  |||||||||||||| || |||| ||||||||||||||||    
T  28034204 catttgagatttacatgattaataagaaaataattaattgagttaattttaatggtaaaat 28034144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 519
Target Start/End: Original strand, 34393977 - 34394033
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||||||| |||||||||||||||| ||||||| ||| ||| |||| |||||||||    
T  34393977 gttgattttgatggtaaaattagtataatttactaaaacacctttattaattatagt 34394033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 524 - 607
Target Start/End: Complemental strand, 40109732 - 40109650
Alignment:
Q  524 tagagtgaaattcaataaataatggtatatgagtggaaaaa-ataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||||||||   ||||| |||||||||| ||||| ||||||||||||| ||| ||||  |||||||||||||    
T  40109732 tagagtgaaattcaataaataagaatatattagtggaaaaatataat-aaatgttgcatta-tattctaaaatgacaattatttt 40109650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Complemental strand, 31082711 - 31082656
Alignment:
Q  464 ttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||||| ||||||||||  |||||||| ||| |||||||| |||||||||    
T  31082711 ttgattttaatgataaaattagtggtatttactaaaacacccttattaattatagt 31082656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 606
Target Start/End: Original strand, 17719359 - 17719436
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaa-ataataaaatgttgcattagtatcctaaggtgacaattattt 606  Q
    ||||||| ||||||||| ||||||  | |||||||| |||||||| ||||||||| |||| |||| |||||||||||||    
T  17719359 tgaaatttaataaataaaggtataataatggaaaaagataataaa-tgttgcattggtattctaaagtgacaattattt 17719436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 612
Target Start/End: Original strand, 36006988 - 36007073
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaa--tgttgcattagtatcctaaggtgacaattattttaagac 612  Q
    |||||||||||||||||  | |||  |||| ||||||||| || |  |||||||||||||| |||| |||||||||||||| ||||    
T  36006988 tgaaattcaataaataagagcataatagtgaaaaaaataaaaataattgttgcattagtattctaaagtgacaattattttgagac 36007073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 611
Target Start/End: Original strand, 396742 - 396794
Alignment:
Q  561 aaaaataataa--aatgttgcattagtatcctaaggtgacaattattttaaga 611  Q
    |||||||||||  ||||||||||| |||| |||| ||||||||||||||||||    
T  396742 aaaaataataataaatgttgcattggtattctaaagtgacaattattttaaga 396794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 1875590 - 1875671
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||| |||| |||| ||  |||||||| ||||||||||||||||  ||||||| ||| |||||||| |||| ||||    
T  1875590 gattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgtagt 1875671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 605
Target Start/End: Original strand, 1875840 - 1875916
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaa-taataaaatgttgcattagtatcctaaggtgacaattatt 605  Q
    ||||||| ||||||||| ||||||  ||||||||||| |||| |||||||||||| ||||  ||| ||||||||||||    
T  1875840 tgaaatttaataaataagggtatactagtggaaaaaagtaat-aaatgttgcattggtattgtaaagtgacaattatt 1875916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 9300111 - 9300192
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||||||||| |||  ||  |||||||||||||||||||||| ||  ||||||| ||| |||||||| |||| ||||    
T  9300111 gattattaagaaaatgattgtttgtgttgattttaatggtaaaattaatagcatttactaaaacacccttattaattttagt 9300192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 519
Target Start/End: Original strand, 36006897 - 36006966
Alignment:
Q  450 aataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||||  ||||||||||||| |||||||| ||||||| ||| ||||| || ||| |||| ||||    
T  36006897 aataattagttgtgttgattttaatgataaaattaatattattgactaaaatatccctattaattgtagt 36006966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 435 - 484
Target Start/End: Original strand, 45425661 - 45425710
Alignment:
Q  435 catgattcttaagaaaataattagtttagttgattttaatggtaaaatta 484  Q
    ||||||| |||||||||| |||| ||  ||||||||||||||||||||||    
T  45425661 catgattattaagaaaatgattaattgtgttgattttaatggtaaaatta 45425710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 34119 - 34196
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||  |||  ||| ||||||||||||||    
T  34119 tgaaattcaataaataatggtataatagtggaaaaaataat-aaatgatgcattgatattgtaaagtgacaattatttt 34196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 443 - 521
Target Start/End: Complemental strand, 1817 - 1739
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagtca 521  Q
    |||||||||| |||| ||  ||||||||| |||||||||||||||| ||||||||||| |||| ||| |||| ||||||    
T  1817 ttaagaaaatgattaattatgttgattttgatggtaaaattagtatcatttacttaaacacccgtattaattgtagtca 1739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000005; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 6160459 - 6160540
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||||||||| |||| ||  |||||||| |||| |||||||||||||||||||| |||||| ||||| |||| ||||    
T  6160459 gatttttaagaaaatgattaattgtgttgatttcaatgataaaattagtattatttactaaaatactcttattaattgtagt 6160540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 23168993 - 23169074
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||||||||||||| ||  |||||||| ||||||||||||||||  ||||||| ||| | |||||| |||||||||    
T  23168993 gattattaagaaaataattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacatccttattaattatagt 23169074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 24991756 - 24991835
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtgg--aaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  |||||  ||||||||||||| ||||||||||||||  ||| ||||||||||||||    
T  24991756 tgaaattcaataaataaaggtataatagtgggaaaaaaataataaa-tgttgcattagtattgtaaagtgacaattatttt 24991835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 532 - 607
Target Start/End: Complemental strand, 12039094 - 12039019
Alignment:
Q  532 aattcaataaataatggtatatgagtggaaaa-aataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    |||||||||||||| ||||||  ||||||||| ||||||||| ||||||||||||||  ||| ||||||||||||||    
T  12039094 aattcaataaataagggtataatagtggaaaataataataaa-tgttgcattagtattgtaaagtgacaattatttt 12039019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 443 - 519
Target Start/End: Complemental strand, 45331454 - 45331378
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||||||||||||| ||  ||||||||| |||||||||||| ||| ||||||| ||| |||||||| |||| ||||    
T  45331454 ttaagaaaataattaattatgttgattttgatggtaaaattaatatcatttactaaaacacccttattaattgtagt 45331378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 435 - 514
Target Start/End: Complemental strand, 31042918 - 31042839
Alignment:
Q  435 catgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaatt 514  Q
    ||||||| ||||| |||| |||| ||  |||||||| ||||||||||||||||| |||||||  ||||||||||| ||||    
T  31042918 catgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcatttactgtaatacccttattaatt 31042839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 444 - 519
Target Start/End: Original strand, 49223992 - 49224067
Alignment:
Q  444 taagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||||||| |||| ||  ||||||||| |||||||||||||||| ||||||| ||| |||||||| |||| ||||    
T  49223992 taagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttattaattgtagt 49224067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 4659791 - 4659714
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| | ||||  |||||||||||||| | ||||||||||| ||||  ||| ||||||||||||||    
T  4659791 tgaaattcaataaataaggatataatagtggaaaaaataa-ataatgttgcattggtattgtaaagtgacaattatttt 4659714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 482
Target Start/End: Complemental strand, 11642304 - 11642239
Alignment:
Q  417 tgtcacatttgaattttacatgattcttaagaaaataattagtttagttgattttaatggtaaaat 482  Q
    |||| ||||||| ||||||||| || |||||||||| |||| | | ||||||||||||||||||||    
T  11642304 tgtctcatttgagttttacatggttattaagaaaatgattaatattgttgattttaatggtaaaat 11642239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 917117 - 917061
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||| ||||||||||||| ||| ||||||| |||||||||||| |||| ||||    
T  917117 gttgatttaaatggtaaaattaatatcatttactaaaatacccttattaattgtagt 917061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 7351729 - 7351673
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||||||||||| |||||||| ||||||||||| ||||| |||||| |||| ||||    
T  7351729 gttgattttaatgataaaattaatattatttactaaaataaccttattaattctagt 7351673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 11449900 - 11449822
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattattttaa 609  Q
    ||||||||||||||||| ||||||  | |||||| || || |||||||||||||||||| |||| ||||||| ||||||||    
T  11449900 tgaaattcaataaataa-ggtataataatggaaagaaaaa-aaaatgttgcattagtattctaaagtgacaactattttaa 11449822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 546
Target Start/End: Complemental strand, 35538756 - 35538653
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagtcaag-tagagtgaaattcaataa 541  Q
    |||||||||| |||| ||  |||||||| |||| ||||||   ||||||||||| ||||| |||||| |||| |||| ||| |||| |||||||||||||    
T  35538756 ttaagaaaattattaattgtgttgatttcaatgataaaatggatattatttactaaaatatccttattaattgtagttaagttaga-tgaaattcaataa 35538658  T
Q  542 ataat 546  Q
    |||||    
T  35538657 ataat 35538653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 36702014 - 36701958
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||| ||||||||||||||||| ||||||| |||| ||||||| |||| ||||    
T  36702014 gttgatttcaatggtaaaattagtatcatttactaaaatgcccttattaattgtagt 36701958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 519
Target Start/End: Complemental strand, 36718118 - 36718062
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||| ||||||||||||||||| ||||||| |||| ||||||| |||| ||||    
T  36718118 gttgatttcaatggtaaaattagtatcatttactaaaatgcccttattaattgtagt 36718062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 519
Target Start/End: Original strand, 40144852 - 40144928
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||||||||| |||| ||  ||||||||| |||||||||||| ||| ||||||| ||| |||||||| |||| ||||    
T  40144852 ttaagaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaattgtagt 40144928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 519
Target Start/End: Original strand, 41121850 - 41121906
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||||||| ||||||||||||| || ||||||| |||||||||||| |||| ||||    
T  41121850 gttgattttgatggtaaaattagcataatttactaaaatacccttattaattgtagt 41121906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 6785271 - 6785193
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaa-taataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  ||||||||||| ||||||| ||||||||  ||||  ||| ||||||||||||||    
T  6785271 tgaaattcaataaataagggtataatagtggaaaaaaataataaa-tgttgcataggtattgtaaagtgacaattatttt 6785193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 496
Target Start/End: Original strand, 15444460 - 15444539
Alignment:
Q  417 tgtcacatttgaattttacatgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttact 496  Q
    |||||||||||| ||||| ||| || ||||| |||| |||| |   ||||||||||||||||||||  ||||||||||||    
T  15444460 tgtcacatttgagttttatatggttattaaggaaatgattaatagtgttgattttaatggtaaaatatgtattatttact 15444539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 572
Target Start/End: Original strand, 35682897 - 35682940
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaa 572  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||    
T  35682897 tgaaattcaataaataagggtataatagtggaaaaaataataaa 35682940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 39864126 - 39864048
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaa-taataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  ||||||||||| ||||||| |||||||||  |||  ||| ||||||||||||||    
T  39864126 tgaaattcaataaataagggtataatagtggaaaaaaataataaa-tgttgcattgatattgtaaagtgacaattatttt 39864048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 560 - 607
Target Start/End: Original strand, 49224121 - 49224167
Alignment:
Q  560 aaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  49224121 aaaaaataataaa-tgttgcattagtattctaaagtgacaattatttt 49224167  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 496
Target Start/End: Complemental strand, 10495956 - 10495898
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttact 496  Q
    |||| |||| ||||| |||| ||| ||||||||| |||||||||||||||| |||||||    
T  10495956 gattattaaaaaaattattaattttgttgattttgatggtaaaattagtatcatttact 10495898  T

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Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 504
Target Start/End: Original strand, 16395047 - 16395113
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacc 504  Q
    |||| |||||||||| |||| ||  ||||||||| || ||||||||||||| ||||||| |||||||    
T  16395047 gattattaagaaaatgattaattgtgttgattttgatagtaaaattagtatcatttactaaaatacc 16395113  T

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Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 27721545 - 27721468
Alignment:
Q  531 aaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattattttaa 609  Q
    |||||||||||||||  |||||  ||||||||||||||| ||||| |||||| ||||  ||| ||| ||||||||||||    
T  27721545 aaattcaataaataaaagtataatagtggaaaaaataat-aaatgatgcatttgtattgtaaagtggcaattattttaa 27721468  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 463 - 497
Target Start/End: Complemental strand, 28092605 - 28092571
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttactt 497  Q
    |||||||||||||||||||||| ||||||||||||    
T  28092605 gttgattttaatggtaaaattaatattatttactt 28092571  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 43614490 - 43614448
Alignment:
Q  463 gttgattttaatggtaaaattagtattatttacttaaataccc 505  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||    
T  43614490 gttgattttaatggtaaaattagtatcattgactaaaataccc 43614448  T

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Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 463 - 565
Target Start/End: Complemental strand, 44122308 - 44122203
Alignment:
Q  463 gttgattttaatggtaaaattagtat--tatttacttaaatacccttatgaattatagtca-agtagagtgaaattcaataaataatggtatatgagtgg 559  Q
    |||||||||||||| |||||  ||||  |||||||| ||| |||||||| ||||||||| | ||  || |||||| |||||||||| ||||| | |||||    
T  44122308 gttgattttaatggaaaaatatgtatcatatttactaaaacacccttattaattatagttatagatgattgaaatgcaataaataagggtatgttagtgg 44122209  T
Q  560 aaaaaa 565  Q
    ||||||    
T  44122208 aaaaaa 44122203  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 515 - 607
Target Start/End: Complemental strand, 7759244 - 7759152
Alignment:
Q  515 atagtcaagtagagtgaaattcaataaataatggtatatgagtggaaaaaa-taataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||| |||| || ||||||||||||||||| ||||||  | ||||||||| ||||||| || ||||||| |||  ||| ||||||||||||||    
T  7759244 atagttaagttgaatgaaattcaataaataagggtataataatggaaaaaaataataaa-tgatgcattattattgtaaagtgacaattatttt 7759152  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 508
Target Start/End: Complemental strand, 22181449 - 22181384
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaataccctta 508  Q
    ||||| |||| ||||||| |||| |||| ||||||||||||| ||| ||||||| ||| |||||||    
T  22181449 ttaaggaaatgattagttgagttcatttcaatggtaaaattaatatcatttactaaaacaccctta 22181384  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Complemental strand, 26093512 - 26093431
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| |||||||||| |||| ||  |||||||| ||||||||||||| ||| ||||| | ||||| |||||| |||| ||||    
T  26093512 gattattaagaaaatgattaattgtgttgatttcaatggtaaaattaatatcatttattaaaatatccttattaattgtagt 26093431  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 496
Target Start/End: Complemental strand, 27687354 - 27687301
Alignment:
Q  443 ttaagaaaataattagtttagttgattttaatggtaaaattagtattatttact 496  Q
    |||| ||||| |||||||  |||||||| ||||||||||||| |||||||||||    
T  27687354 ttaaaaaaatgattagttgtgttgatttcaatggtaaaattaatattatttact 27687301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 30754941 - 30755022
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||| |||| |||| ||  ||||||||||| |||||||||  ||||||||||| ||||| | |||| |||||||||    
T  30754941 gattattaaggaaatgattaattgtgttgattttaagggtaaaatttatattatttactaaaatatcattattaattatagt 30755022  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 503
Target Start/End: Original strand, 32970567 - 32970632
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatac 503  Q
    |||| |||||||||| |||| ||  |||||||| |||| |||||||| ||||||||||| ||||||    
T  32970567 gattattaagaaaatgattaattgtgttgatttcaatgataaaattaatattatttactaaaatac 32970632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 607
Target Start/End: Original strand, 33733359 - 33733443
Alignment:
Q  523 gtagagtgaaattcaataaataatggtatatgagtggaaaa-aataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||| ||||||||||||||||| ||||||  | ||||||| |||||| ||||| | |||| |||| |||| ||||||||||||||    
T  33733359 gtagaatgaaattcaataaataagggtataataatggaaaagaataat-aaatgcttcattggtattctaaagtgacaattatttt 33733443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Complemental strand, 39864229 - 39864148
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||| |||| |||| ||  |||||||| ||||||||||||||||  ||||||| |||||| ||||| |||| ||||    
T  39864229 gattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaatactcttattaattgtagt 39864148  T

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Target: scaffold0294 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 435 - 519
Target Start/End: Complemental strand, 17156 - 17072
Alignment:
Q  435 catgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||||| |||||||||| |||| ||  |||||||| ||||||||||||||||  ||||| |  || |||||||| |||||||||    
T  17156 catgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttattagaacacccttattaattatagt 17072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 784 - 861
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||  |||||||||||| ||  ||||||||| | ||||  ||| ||||||||||||||    
T  784 tgaaattcaataaataagggtataatagtggaaaaaat-attcaatgttgcaatggtattgtaaagtgacaattatttt 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 5405 - 5329
Alignment:
Q  529 tgaaattcaataaataatggtatatgagtggaaaaaataataaaatgttgcattagtatcctaaggtgacaattatttt 607  Q
    ||||||||||||||||| ||||||| | ||||||||||||| |||||||| ||| | || |||| || |||||||||||    
T  5405 tgaaattcaataaataaaggtatat-aatggaaaaaataat-aaatgttgtattggcattctaaagtaacaattatttt 5329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 433 - 519
Target Start/End: Complemental strand, 5513 - 5427
Alignment:
Q  433 tacatgattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    ||||||||| |||||||||| ||||  |  ||||| || ||||||||||||| ||| ||||||| ||||| |||||| |||| ||||    
T  5513 tacatgattattaagaaaatgattaactgtgttgaattcaatggtaaaattaatatcatttactaaaatatccttattaattttagt 5427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 519
Target Start/End: Original strand, 1814 - 1895
Alignment:
Q  438 gattcttaagaaaataattagtttagttgattttaatggtaaaattagtattatttacttaaatacccttatgaattatagt 519  Q
    |||| ||||||||||||||| ||  ||||||||| || || |||||| ||| ||||||| ||| ||| |||| |||||||||    
T  1814 gattattaagaaaataattaattgtgttgattttgatagtcaaattaatatcatttactaaaacacctttattaattatagt 1895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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