View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9653_low_12 (Length: 445)
Name: NF9653_low_12
Description: NF9653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9653_low_12 |
 | |
|
| [»] chr7 (31 HSPs) |
| |
|
| [»] chr4 (3 HSPs) |
| |
|
| [»] scaffold1207 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 416; Significance: 0; HSPs: 31)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 18 - 445
Target Start/End: Original strand, 10494232 - 10494659
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494232 |
ggtgctattgctggccttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
10494331 |
T |
|
| Q |
118 |
gaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacac |
217 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
10494332 |
gaaatatttttgtctttgatctgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccactgcaggtaacac |
10494431 |
T |
|
| Q |
218 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatcc |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494432 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatcc |
10494531 |
T |
|
| Q |
318 |
ttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgact |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494532 |
ttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgact |
10494631 |
T |
|
| Q |
418 |
tttcttcatcaatcactcgtgccaaatt |
445 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
10494632 |
tttcttcatcaatcactcgtgccaaatt |
10494659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 18 - 445
Target Start/End: Original strand, 13333314 - 13333741
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
117 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| | |
|
|
| T |
13333314 |
ggtgctattgctggccttaatatcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagacgtgattgtgatggtaagc |
13333413 |
T |
|
| Q |
118 |
gaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacac |
217 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
13333414 |
gaaatatttttgtctttgatctgggtggtggtacttttgatgtgtctatccttacaattatgggtgatgtctttgaagtaaaagccaccgcaggaaacac |
13333513 |
T |
|
| Q |
218 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatcc |
317 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| |
|
|
| T |
13333514 |
tcaccttgggggagaagacttcgataacagaatggtgaactattttgttgaggagttcaaaaagaagaataacgtcgatatcagtgggaacccaaaatcc |
13333613 |
T |
|
| Q |
318 |
ttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgact |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||||||||||| |
|
|
| T |
13333614 |
ttaaggaggttgagaactgcctgtgagagggaaaaaaggatactctccttttcttttgtcaccactgttgaagtagatgctttatttatgggaatcgact |
13333713 |
T |
|
| Q |
418 |
tttcttcatcaatcactcgtgccaaatt |
445 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
13333714 |
tttcttcatcaatcactcgtgccaaatt |
13333741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 22 - 445
Target Start/End: Complemental strand, 8667725 - 8667302
Alignment:
| Q |
22 |
ctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaa |
121 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||| |||||| |
|
|
| T |
8667725 |
ctattgctggacttaatgtcattcggataatcaatgaacctactgcggcagctattgcatatggccttgacaagagaaatgactgtgatggtagccgaaa |
8667626 |
T |
|
| Q |
122 |
tatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcac |
221 |
Q |
| |
|
|||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| |
|
|
| T |
8667625 |
tatttttgtctttgatctgggtggcgggacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtgaaagccactgcaggaaacactcac |
8667526 |
T |
|
| Q |
222 |
cttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaa |
321 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||| ||| ||||||||||||| |
|
|
| T |
8667525 |
cttgggggcgaggacttcgataacagaatggtgaactattttgttgaggagttaaaaaagaagaataaagtggacatcagtcagaacccaaaatccttaa |
8667426 |
T |
|
| Q |
322 |
ggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttc |
421 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
8667425 |
ggaggttgagaactgcctgtgagagggcaaaaaggatactctcttttgcttttgttaccactgttgaggtagatgctttatttacgggaatcgacttttg |
8667326 |
T |
|
| Q |
422 |
ttcatcaatcactcgtgccaaatt |
445 |
Q |
| |
|
||||||||| |||||||| ||||| |
|
|
| T |
8667325 |
ttcatcaattactcgtgctaaatt |
8667302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 18 - 445
Target Start/End: Complemental strand, 8654760 - 8654333
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
117 |
Q |
| |
|
||||| |||||||| ||||| |||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||| ||||| | | ||| ||||| | |
|
|
| T |
8654760 |
ggtgccattgctggacttaacgtcattcggatactcaatgaacctactgccgcagctattgcatatggccttgacaagcgaagtaactatgatggtaaac |
8654661 |
T |
|
| Q |
118 |
gaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacac |
217 |
Q |
| |
|
| |||||||| || |||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || || ||||| |
|
|
| T |
8654660 |
ggaatattttggtatttgatcttggtggtggtacttttgatgtgtctatactcacaattaagggtgatgtctttgacgtaaaagccactgctggaaacac |
8654561 |
T |
|
| Q |
218 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatcc |
317 |
Q |
| |
|
||||| |||||||| ||||| ||||||||||||||| | || ||||| ||||||||||||||||||||||| ||||| || || || || ||||||||| |
|
|
| T |
8654560 |
gcacctagggggagaagactttgataacagaatggtgtactactttgtagaggagttcaaaaagaagaataaagtggaaattagcggtaacccaaaatcc |
8654461 |
T |
|
| Q |
318 |
ttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgact |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
8654460 |
ttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctcttttacttttgtcaccactgttgaggtagatgctttatttatgggaatcgact |
8654361 |
T |
|
| Q |
418 |
tttcttcatcaatcactcgtgccaaatt |
445 |
Q |
| |
|
|||||||||||||||||||||| ||||| |
|
|
| T |
8654360 |
tttcttcatcaatcactcgtgctaaatt |
8654333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 18 - 441
Target Start/End: Complemental strand, 8659673 - 8659250
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
117 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| |||| ||||| ||||| | |
|
|
| T |
8659673 |
ggtgccattgctggccttaatgtcattcagataattaatgaacctactgctgcagctattgcatatggttttgacaagagaggtgactgtgatggtaaac |
8659574 |
T |
|
| Q |
118 |
gaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacac |
217 |
Q |
| |
|
||||||||| ||||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | || ||||| |
|
|
| T |
8659573 |
aaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacac |
8659474 |
T |
|
| Q |
218 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatcc |
317 |
Q |
| |
|
||||||||| ||||||||||| |||| |||||||||||| || ||||| ||||||||||||||||||||||| |||||||| ||||| || ||||||||| |
|
|
| T |
8659473 |
tcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcc |
8659374 |
T |
|
| Q |
318 |
ttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgact |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||| |||||||||||| |||||||| |||||| |||| |
|
|
| T |
8659373 |
ttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttcagggaatagact |
8659274 |
T |
|
| Q |
418 |
tttcttcatcaatcactcgtgcca |
441 |
Q |
| |
|
| | ||||| |||||||||||||| |
|
|
| T |
8659273 |
tctgttcattaatcactcgtgcca |
8659250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 18 - 442
Target Start/End: Complemental strand, 1301774 - 1301346
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaaccta----ctgctgcagctattgcatatggccttgacaagagaagtgattgtgagggt |
113 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||| ||| |
|
|
| T |
1301774 |
ggtgcaattgctggccttaatgtcattcagataattaatgaacctagctactgctgcagctattgcgtatggttttgacaagagaagtgactgtgatggt |
1301675 |
T |
|
| Q |
114 |
aaccgaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggta |
213 |
Q |
| |
|
|| || |||||||| |||||||| | || |||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||| | || | |
|
|
| T |
1301674 |
aaacggaatattttggtctttgaccttggcggtggtacttttgatgtgtctatccttaccatcaagggcgatgtctttgaagtaaaagccactggtggaa |
1301575 |
T |
|
| Q |
214 |
acactcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaa |
313 |
Q |
| |
|
| ||||||||||| ||||||||||| ||||| |||||||||| || ||||| |||||||||| |||||||||||| |||||||| ||||| || | || |
|
|
| T |
1301574 |
atactcaccttggaggagaggactttgataatagaatggtgagctactttgtagaggagttcagaaagaagaataaagtggacattagtggtaaccagaa |
1301475 |
T |
|
| Q |
314 |
atccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatc |
413 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
1301474 |
atccttaaggaggttgagaattgcgtgtgagagggcaaaaaggacactctcttttgctttagtcaccaccgttgaggtcgattctttatttcagggaatc |
1301375 |
T |
|
| Q |
414 |
gacttttcttcatcaatcactcgtgccaa |
442 |
Q |
| |
|
||||| | ||||| ||||||||||||||| |
|
|
| T |
1301374 |
gacttctgttcattaatcactcgtgccaa |
1301346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 271
Target Start/End: Original strand, 8585564 - 8585817
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
117 |
Q |
| |
|
||||| ||||||||||||||||| || | |||||||||||||| |||||||||||||||||||||||||||||||| | | || | ||||| ||| | | |
|
|
| T |
8585564 |
ggtgccattgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttgacaacaaaggtaactgtgatggtgaac |
8585663 |
T |
|
| Q |
118 |
gaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacac |
217 |
Q |
| |
|
||||||||||||| |||||| | |||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||||| || || || |
|
|
| T |
8585664 |
gaaatatttttgtgtttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagcaaccgctggaaatac |
8585763 |
T |
|
| Q |
218 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgagga |
271 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||| |||| || ||||||||||| |
|
|
| T |
8585764 |
tcaccttgggggaggggactttgataacagaatgttgaactactttgttgagga |
8585817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 8628842 - 8628609
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
117 |
Q |
| |
|
||||| ||||||||||||||||| || | ||||||||||| || |||||||||||||||||||||||||||||||| | | || ||||| ||| | | |
|
|
| T |
8628842 |
ggtgccattgctggccttaatgttatgaggataatcaatgaccccactgctgcagctattgcatatggccttgacaacaaaggtaggtgtgatggtgaac |
8628743 |
T |
|
| Q |
118 |
gaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacac |
217 |
Q |
| |
|
||||||||||||| |||||| | |||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||| || || || || |
|
|
| T |
8628742 |
gaaatatttttgtgtttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccactgctggaaatac |
8628643 |
T |
|
| Q |
218 |
tcaccttgggggagaggacttcgataacagaatg |
251 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||| |
|
|
| T |
8628642 |
tcaccttggtggagaggactttgataacagaatg |
8628609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 18 - 442
Target Start/End: Complemental strand, 3147582 - 3147150
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtga----gggt |
113 |
Q |
| |
|
|||| |||||||||||||||| | || || |||||||||||||||||||||||||||||||| ||||| || |||||||||| | |||||| | || |
|
|
| T |
3147582 |
ggtgttattgctggccttaatattatgcggataatcaatgaacctactgctgcagctattgcgtatggactggacaagagaactaattgtgtaattgtgt |
3147483 |
T |
|
| Q |
114 |
a----accgaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgca |
209 |
Q |
| |
|
| | || ||||||||| ||||||| ||||||||||| ||||||||||||||| | || |||||||||| | | |||||| |||| || |||| |||| |
|
|
| T |
3147482 |
agaggagcgtaatatttttatctttgacttgggtggtgggacttttgatgtgtctcttcttacaattaaggataaggtctttcaagttaaggccatcgca |
3147383 |
T |
|
| Q |
210 |
ggtaacactcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatc |
309 |
Q |
| |
|
|| ||||| |||||||||||||||||||| ||||| || |||||||| || |||| |||||| || |||||||| || || ||||| |||| ||| |
|
|
| T |
3147382 |
ggaaacacccaccttgggggagaggactttgataataggatggtgaactactttgcacgggagtttaagaagaagaacaaggtagacattagtgagaact |
3147283 |
T |
|
| Q |
310 |
caaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatggg |
409 |
Q |
| |
|
||| | ||||||||||||||| ||| || ||||| || |||||| | ||||| |||||| || | |||||||| ||||| | ||| |||||||| ||| |
|
|
| T |
3147282 |
caagagccttaaggaggttgaaaacggcgtgtgaaagagcaaaacgaatactatcttttgctgtcatcaccaccattgagatagattctttatttcaggg |
3147183 |
T |
|
| Q |
410 |
aatcgacttttcttcatcaatcactcgtgccaa |
442 |
Q |
| |
|
| | ||||| | ||||||||||||||||||||| |
|
|
| T |
3147182 |
atttgacttattttcatcaatcactcgtgccaa |
3147150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 49 - 442
Target Start/End: Complemental strand, 17260520 - 17260127
Alignment:
| Q |
49 |
taatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttgtctttgatttgggtggtgg |
148 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||| |||||||| | |||||| || ||||||||||||||||| | ||||| || |
|
|
| T |
17260520 |
taattaatgaacctattgctgcagctattgcatatggccttgtcaagagaactaattgtgtttaagtacggaatatttttgtctttgaccttggtggggg |
17260421 |
T |
|
| Q |
149 |
tacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgataacaga |
248 |
Q |
| |
|
||||||||||||||| || | |||||||||| | | ||||| ||||| || ||||||| || ||||||| |||||||| |||||||| ||||| ||| |
|
|
| T |
17260420 |
gacttttgatgtgtctctcgttacaattaaggataaggtcttcgaagttaaggccaccggtggagacactcatcttgggggtgaggactttgataataga |
17260321 |
T |
|
| Q |
249 |
atggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtgagaggg |
348 |
Q |
| |
|
|||||| | |||||||| |||||| |||||| | ||| || ||||||| | |||||| |||||| |||||||||||||||||||||| ||||| | | |
|
|
| T |
17260320 |
atggtgtactattttgtagaggagatcaaaagaacgaaaaaattggacattattgggaacccaaaagccttaaggaggttgagaactgcatgtgaaaaag |
17260221 |
T |
|
| Q |
349 |
caaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgccaa |
442 |
Q |
| |
|
||||||||| ||| |||||| | | ||| |||| |||||||| || |||||||||| ||| | | |||||||| ||||||||||||||||| |
|
|
| T |
17260220 |
caaaaaggacactttcttttgcctctgtgaccaatgttgaggtagacgctttatttaagggtgttaatttttcttcgtcaatcactcgtgccaa |
17260127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 49 - 442
Target Start/End: Complemental strand, 17268218 - 17267825
Alignment:
| Q |
49 |
taatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttgtctttgatttgggtggtgg |
148 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||| |||||||| | | |||| | | || ||||||||||||||||| | |||||||| |
|
|
| T |
17268218 |
taatcaatgaaccaactgctgcagctattgcatatggccttggcaagagaactaactgtgttgaagaacggaatatttttgtctttgaccttggtggtgg |
17268119 |
T |
|
| Q |
149 |
tacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgataacaga |
248 |
Q |
| |
|
||||||||||||||| || | |||||||||| | | ||||| ||||| || ||||||| || ||||||| |||||||| |||||||| ||||| ||| |
|
|
| T |
17268118 |
gacttttgatgtgtctctcgttacaattaaggataaggtcttcgaagttaaggccaccggtggagacactcatcttgggggtgaggactttgataataga |
17268019 |
T |
|
| Q |
249 |
atggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtgagaggg |
348 |
Q |
| |
|
||||| | |||||||||||||| |||||| ||| || || || | || |||||| |||||| || | ||||||||||||||||| ||||| | | |
|
|
| T |
17268018 |
atggtatactattttgttgaggaaatcaaaaggaaaaaaaaattgaaaattgttgggaacccaaaagccatgaggaggttgagaactgcatgtgaaaaag |
17267919 |
T |
|
| Q |
349 |
caaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgccaa |
442 |
Q |
| |
|
||||||||| ||| ||||| | | ||| |||| |||||||| || |||||||||| ||| | || |||||||| ||||||||||||||||| |
|
|
| T |
17267918 |
caaaaaggacactttctttcgcctctgtgaccaatgttgaggtagacgctttatttaagggtgttgatttttcttcgtcaatcactcgtgccaa |
17267825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 24 - 445
Target Start/End: Complemental strand, 8647181 - 8646760
Alignment:
| Q |
24 |
attgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaata |
123 |
Q |
| |
|
||||||||||||||| |||| || |||||||||||||| || ||||| ||| | |||||||||||||||||||||| |||||| | | ||||||| |
|
|
| T |
8647181 |
attgctggccttaatatcatccggataatcaatgaaccaacagctgctgctctcgcatatggccttgacaagagaacaaattgtgctgaagaacgaaata |
8647082 |
T |
|
| Q |
124 |
tttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcacct |
223 |
Q |
| |
|
| || |||| || | |||||||| ||||||||||||||| |||| |||||||||| | | |||||| | || ||||||||||| || ||||||||||| |
|
|
| T |
8647081 |
tattcatcttcgaccttggtggtggaacttttgatgtgtctctccttacaattaaggataaggtctttcatgttaaagccaccgctggaaacactcacct |
8646982 |
T |
|
| Q |
224 |
tgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaagg |
323 |
Q |
| |
|
|| ||||||||||| |||| ||||||||| | | |||| | || || || |||||||| || |||||||| | ||| || ||| | |||||||| |
|
|
| T |
8646981 |
cggaggagaggactttgatagtagaatggtggaccactttgcacaagaatttaacaagaagaacaaggtggacattactggaaactcaagagccttaagg |
8646882 |
T |
|
| Q |
324 |
aggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttctt |
423 |
Q |
| |
|
||||||||||| || || ||||| |||||||||| ||| |||||| ||| | ||||||| |||| | ||| ||||||||| || || |||||| || |
|
|
| T |
8646881 |
aggttgagaacggcatgcgagagagcaaaaaggacactatcttttgcttcttgcaccaccattgaattagattctttatttaatggcattgactttattt |
8646782 |
T |
|
| Q |
424 |
catcaatcactcgtgccaaatt |
445 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
8646781 |
catcaatcactcgtgccaaatt |
8646760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 18 - 404
Target Start/End: Original strand, 27830733 - 27831119
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
117 |
Q |
| |
|
||||| ||||||||||||||||| || || ||||| | || |||||||||||||||||||||||||||||||||| | ||| | | | || | | |
|
|
| T |
27830733 |
ggtgccattgctggccttaatgttatgcggataataagcgagcctactgctgcagctattgcatatggccttgacacgggaacaaaatatactggagaac |
27830832 |
T |
|
| Q |
118 |
gaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacac |
217 |
Q |
| |
|
| ||||||||||| ||||| | |||||||| ||||||||||||||| | | |||||||||| | | ||||| |||| || || || || || ||||| |
|
|
| T |
27830833 |
ggaatatttttgtgtttgaccttggtggtgggacttttgatgtgtctcttgttacaattaaggataaggtcttccaagttaaggcaactgctggaaacac |
27830932 |
T |
|
| Q |
218 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatcc |
317 |
Q |
| |
|
||||||||| ||||||||||| ||||| || |||||||| |||||||| |||| |||||| |||||||| | |||||||| |||||||| |||| | || |
|
|
| T |
27830933 |
tcaccttggtggagaggactttgataataggatggtgaactattttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcc |
27831032 |
T |
|
| Q |
318 |
ttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttattt |
404 |
Q |
| |
|
|| |||||| ||||||| ||||||| ||||||||||| ||||||||||||| ||| ||| || ||||| | ||||| |||||| |
|
|
| T |
27831033 |
ttgaggaggctgagaacctaatgtgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttattt |
27831119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 8671492 - 8671607
Alignment:
| Q |
22 |
ctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaa |
121 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| |
|
|
| T |
8671492 |
ctattgctggacttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaaatgaccgtgaaggtaaccgaaa |
8671591 |
T |
|
| Q |
122 |
tatttttgtctttgat |
137 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
8671592 |
tatttttgtctttgat |
8671607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 36 - 357
Target Start/End: Complemental strand, 8545924 - 8545604
Alignment:
| Q |
36 |
aatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttgtctttg |
135 |
Q |
| |
|
|||||||| || |||||||||||||| ||||| || ||| |||||||||||||| | |||||| | |||| | | ||| ||||||||||| |||||| |
|
|
| T |
8545924 |
aatgtcatgcggataatcaatgaaccgactgcggcggctcttgcatatggccttcaaaagagagctaattg-gttgataagagaaatatttttatctttg |
8545826 |
T |
|
| Q |
136 |
atttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagagga |
235 |
Q |
| |
|
| | || ||||| ||||||||||||||||| || |||||||| | | |||||||| || || ||||| || || ||||| |||| || || || || |
|
|
| T |
8545825 |
accttggcggtggaacttttgatgtgtctattcttacaattaaaaataaggtctttgatgtcaaggccactgctggagacacttacctaggcggtgaaga |
8545726 |
T |
|
| Q |
236 |
cttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaact |
335 |
Q |
| |
|
||| |||||||||||||||||||| ||||| |||||||||| | |||||| || | ||| || ||| |||| ||| || |||| ||||||||||||||| |
|
|
| T |
8545725 |
ctttgataacagaatggtgaattactttgtgaaggagttcaagaggaagaacaatgaggatattagtcggaacccagaagccttgaggaggttgagaact |
8545626 |
T |
|
| Q |
336 |
gcctgtgagagggcaaaaagga |
357 |
Q |
| |
|
|||||||||| ||||||||||| |
|
|
| T |
8545625 |
gcctgtgagaaggcaaaaagga |
8545604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 357
Target Start/End: Complemental strand, 8576638 - 8576297
Alignment:
| Q |
16 |
caggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaa |
115 |
Q |
| |
|
||||||| |||||||| || |||||||| | |||||||||||||| ||||| |||||| |||| ||||||||| | |||||| | |||||| | ||| |
|
|
| T |
8576638 |
caggtgcaattgctggtctcaatgtcatgcagataatcaatgaaccgactgcggcagctcttgcgtatggccttcaaaagagagctaattgtgttgataa |
8576539 |
T |
|
| Q |
116 |
ccgaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaac |
215 |
Q |
| |
|
||||||||||| ||||||| | || ||||| ||||||||||||||||| |||||| ||||| ||||||| ||||| || ||||| || || || |
|
|
| T |
8576538 |
aagaaatatttttatctttgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagac |
8576439 |
T |
|
| Q |
216 |
actcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaat |
315 |
Q |
| |
|
|||||||| || || | ||||| ||||||| ||||||| || | |||||| ||||||||| || ||| | || | ||| || |||| |||| ||||| |
|
|
| T |
8576438 |
actcacctaggaggccaagactttgataacataatggtggatcactttgttaaggagttcaggaacaagtacaaagaggatattagtgagaattcaaaag |
8576339 |
T |
|
| Q |
316 |
ccttaaggaggttgagaactgcctgtgagagggcaaaaagga |
357 |
Q |
| |
|
|||||||||||||||||||||| ||||| | ||||||||||| |
|
|
| T |
8576338 |
ccttaaggaggttgagaactgcttgtgaaaaggcaaaaagga |
8576297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 24 - 357
Target Start/End: Complemental strand, 8570615 - 8570282
Alignment:
| Q |
24 |
attgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaata |
123 |
Q |
| |
|
|||||||| || ||||| || || |||||||||||||| ||||| |||||| |||||||||||||| | |||||| | ||| || | ||| |||||| |
|
|
| T |
8570615 |
attgctggtctcaatgtaatgcggataatcaatgaaccgactgcggcagctcttgcatatggccttcaaaagagagctaattttgttgataagagaaata |
8570516 |
T |
|
| Q |
124 |
tttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcacct |
223 |
Q |
| |
|
||||| ||||||| | || ||||| ||||||||||||||||| |||||| |||||| | | || |||||| || ||||| || || |||||||||| |
|
|
| T |
8570515 |
tttttatctttgaccttggcggtggaacttttgatgtgtctattctcacagttaaggataacaactatgaagtcaaggccactgctggagacactcacct |
8570416 |
T |
|
| Q |
224 |
tgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaagg |
323 |
Q |
| |
|
|| || || || || |||||||||||| ||| | | ||||| || ||||||| |||||||| |||| ||| || ||| |||| |||||| |||| ||| |
|
|
| T |
8570415 |
gggaggtgaagattttgataacagaatgttgactcactttgtgaagaagttcaagaagaagaacaacgaggatattagtaggaacccaaaagccttgagg |
8570316 |
T |
|
| Q |
324 |
aggttgagaactgcctgtgagagggcaaaaagga |
357 |
Q |
| |
|
||||| ||||| || ||||||||||||||||||| |
|
|
| T |
8570315 |
aggttaagaacagcttgtgagagggcaaaaagga |
8570282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 18 - 271
Target Start/End: Original strand, 8636201 - 8636454
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
117 |
Q |
| |
|
||||| ||||| ||||||||||| ||||| |||||||||||||| |||||||||||| |||| ||||| ||| | |||||| || | |||| | |
|
|
| T |
8636201 |
ggtgccattgccggccttaatgtaattcggataatcaatgaaccaactgctgcagcttttgcgtatggacttcaaaagagaggtaactgtgttaaagaga |
8636300 |
T |
|
| Q |
118 |
gaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacac |
217 |
Q |
| |
|
|||| ||||| || |||||| | ||||||||||| || || |||||||| |||| |||||| ||||| ||||||||||| |||||||| || || |||| |
|
|
| T |
8636301 |
gaaacattttcgtatttgatcttggtggtggtacattcgacgtgtctatactcaaaattaaaggtgaagtctttgaagttaaagccactgccggagacac |
8636400 |
T |
|
| Q |
218 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgagga |
271 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||| | |||||||| ||||| |
|
|
| T |
8636401 |
acaccttggaggagaggactttgataacagaatggtggaatattttgtagagga |
8636454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 18 - 368
Target Start/End: Complemental strand, 6789822 - 6789472
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
117 |
Q |
| |
|
||||| |||||||| |||||||| || ||||||||||||||||| || ||||| ||| |||||||||||||||| ||||||| | ||| | || | |
|
|
| T |
6789822 |
ggtgccattgctggtcttaatgttatacgaataatcaatgaaccaacagctgctgctcttgcatatggccttgataagagaactaattacggtggagaaa |
6789723 |
T |
|
| Q |
118 |
gaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacac |
217 |
Q |
| |
|
||||||||| ||||| || | |||||||| ||||| |||||||||||| | ||||| || | | | ||||| |||| || ||||||| || ||||| |
|
|
| T |
6789722 |
aaaatattttcgtcttcgaccttggtggtggcactttcgatgtgtctatcttaacaatcaaagataaggtcttccaagttaaggccaccggtggaaacac |
6789623 |
T |
|
| Q |
218 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatcc |
317 |
Q |
| |
|
|||||| || ||||||||||| |||||| || |||| || || |||| |||||||| || | |||||| || ||||| || | ||| || ||| || |
|
|
| T |
6789622 |
tcacctcggaggagaggactttgataaccgattggtaaactactttgcagaggagtttaagaggaagaacaaagtggatattactggaaactcaagggcc |
6789523 |
T |
|
| Q |
318 |
ttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttt |
368 |
Q |
| |
|
||||| |||||||||||||| ||||| ||||| |||||| ||||||||||| |
|
|
| T |
6789522 |
ttaagaaggttgagaactgcgtgtgaaagggccaaaagggtactctctttt |
6789472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 357
Target Start/End: Original strand, 8382734 - 8383073
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
117 |
Q |
| |
|
||||| ||||||||||| ||||| || || ||||||||||| || ||||| || ||| |||||||||||||| | |||||| | ||||| | | |
|
|
| T |
8382734 |
ggtgcgattgctggcctcaatgtaatgcggataatcaatgagccaactgccgctgctcttgcatatggccttcagaagagagctaattgtcttgaagaga |
8382833 |
T |
|
| Q |
118 |
gaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacac |
217 |
Q |
| |
|
|||||||||| |||||||| | |||||||| ||||||||||||||| |||||||||||||| | ||||||||| || || ||||| || || |||| |
|
|
| T |
8382834 |
gaaatattttcatctttgatcttggtggtggaacttttgatgtgtctctcctcacaattaagaataatgtctttgttgtgaaggccactgccggagacac |
8382933 |
T |
|
| Q |
218 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatcc |
317 |
Q |
| |
|
||| || || || || ||||| ||||||||||| ||||| || |||||||| |||||||| | |||| |||| |||||| |||||||| ||||| | |
|
|
| T |
8382934 |
tcatctaggaggtgaagacttagataacagaatcgtgaagtactttgttgacgagttcaagaggaagcataataaggacattagtgggaacccaaaggct |
8383033 |
T |
|
| Q |
318 |
ttaaggaggttgagaactgcctgtgagagggcaaaaagga |
357 |
Q |
| |
|
| || ||||| ||||| || || |||||||||||||||| |
|
|
| T |
8383034 |
cttagaaggttaagaacggcttgcgagagggcaaaaagga |
8383073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 23 - 352
Target Start/End: Original strand, 29577532 - 29577864
Alignment:
| Q |
23 |
tattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggt---aaccga |
119 |
Q |
| |
|
|||||||||||| ||||| || || |||||||||||||| |||||||| || |||||||||| || | |||||| || ||| || | | || ||| |
|
|
| T |
29577532 |
tattgctggcctcaatgtaatgcggataatcaatgaaccaactgctgctgcacttgcatatggaattcaaaagagaggtaattttgttgttggaaagcga |
29577631 |
T |
|
| Q |
120 |
aatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactc |
219 |
Q |
| |
|
||| | || |||||||| | |||||||| || |||||||||||| | |||||| |||||| |||| ||||||||||| ||||| || ||| | |||| |
|
|
| T |
29577632 |
aatgtattcatctttgatcttggtggtggcacctttgatgtgtctcttctcacacttaaggatgatagttttgaagtaaaggccactgctggtgatactc |
29577731 |
T |
|
| Q |
220 |
accttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatcctt |
319 |
Q |
| |
|
|||| || ||||||||||||||||| | |||||||| | ||||| | ||||| || | |||||| || |||||||| ||| ||| |||||| | || |
|
|
| T |
29577732 |
acctaggaggagaggacttcgataataaaatggtgagccactttgtgaatgagttgaagaggaagaacaatgtggacattagtttgaacccaaaagcttt |
29577831 |
T |
|
| Q |
320 |
aaggaggttgagaactgcctgtgagagggcaaa |
352 |
Q |
| |
|
||||| | |||||||||| |||||||||||||| |
|
|
| T |
29577832 |
aaggaagctgagaactgcttgtgagagggcaaa |
29577864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 27 - 357
Target Start/End: Original strand, 29581708 - 29582038
Alignment:
| Q |
27 |
gctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatattt |
126 |
Q |
| |
|
|||||||| ||||| || | |||||||| ||||| |||||||| || |||||||||| || | ||| || || ||| || || || |||||||| | |
|
|
| T |
29581708 |
gctggcctcaatgtaatgaggataatcaacgaaccaactgctgctgcacttgcatatggtattcaaaagggaggtaattttgttggaaaacgaaatatat |
29581807 |
T |
|
| Q |
127 |
ttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgg |
226 |
Q |
| |
|
| |||||||| | |||||||| ||||||||||||||| | |||||| | |||| |||| |||||||| || ||||| || || | |||||||| || |
|
|
| T |
29581808 |
tcatctttgatcttggtggtggcacttttgatgtgtctcttctcacactcaaggatgataagtttgaagtgaaggccactgctggcgatactcacctagg |
29581907 |
T |
|
| Q |
227 |
gggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggagg |
326 |
Q |
| |
|
||||||||||| |||||| ||||||||||||| |||| | ||||| || | |||||| || ||||||| |||||||| |||||| | ||||||| | |
|
|
| T |
29581908 |
aggagaggactttgataaccgaatggtgaattactttgcgaatgagttgaagaggaagaacaatttggacattagtgggaacccaaaagctttaaggaag |
29582007 |
T |
|
| Q |
327 |
ttgagaactgcctgtgagagggcaaaaagga |
357 |
Q |
| |
|
||||||| || |||||||||||||| |||| |
|
|
| T |
29582008 |
ctgagaacagcttgtgagagggcaaagagga |
29582038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 48 - 357
Target Start/End: Complemental strand, 8581980 - 8581671
Alignment:
| Q |
48 |
ataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttgtctttgatttgggtggtg |
147 |
Q |
| |
|
|||||||||||||| ||||| |||||| |||||||||||||| | |||||| | |||||| | ||| ||||||||||| ||||||| | || |||| |
|
|
| T |
8581980 |
ataatcaatgaaccgactgcggcagctcttgcatatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggaggtg |
8581881 |
T |
|
| Q |
148 |
gtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgataacag |
247 |
Q |
| |
|
| ||||||||||||||||| |||||| ||||| | | | || |||||| || ||||| || || |||||||||| || || || || || |||||||| |
|
|
| T |
8581880 |
gaacttttgatgtgtctattctcacagttaagaataacgactatgaagtcaaggccactgctggagacactcacctgggaggggaagattttgataacag |
8581781 |
T |
|
| Q |
248 |
aatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtgagagg |
347 |
Q |
| |
|
|||||||||| | ||||| ||||||||| | || |||| | ||| || | ||| ||||||||| || | || |||||||| ||||| |||||||| |
|
|
| T |
8581780 |
aatggtgaatcactttgtgtcggagttcaagagaaaacataaagaggagattattggaaatccaaaagccattagaaggttgaggactgcttgtgagaga |
8581681 |
T |
|
| Q |
348 |
gcaaaaagga |
357 |
Q |
| |
|
|| ||||||| |
|
|
| T |
8581680 |
gcgaaaagga |
8581671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 8602284 - 8602025
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
117 |
Q |
| |
|
||||| |||||||| || ||||| || || ||||||||||| || ||||| || ||| |||||||||||||| | |||||| | |||||| | | |
|
|
| T |
8602284 |
ggtgccattgctggtctcaatgtaatgcggataatcaatgagccaactgcagctgctcttgcatatggccttcaaaagagagctaattgtgttgaagaga |
8602185 |
T |
|
| Q |
118 |
gaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacac |
217 |
Q |
| |
|
|||||||||| | |||||| | |||||||| ||||||||||| ||| | |||||||||||| | || |||||||||| || ||||| | || |||| |
|
|
| T |
8602184 |
gaaatattttcatatttgatcttggtggtggaacttttgatgtttctcttctcacaattaagaataatctctttgaagtcaaggccacttccggagacac |
8602085 |
T |
|
| Q |
218 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaa |
277 |
Q |
| |
|
|||||||| ||||||||||| |||||| |||||||||| | |||||| ||||||||| |
|
|
| T |
8602084 |
acaccttggaggagaggactttgataaccgaatggtgaaccactttgttatggagttcaa |
8602025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 256
Target Start/End: Complemental strand, 8559637 - 8559405
Alignment:
| Q |
24 |
attgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaata |
123 |
Q |
| |
|
|||||||| |||||||| || | |||||||||||||| ||||| || ||| |||||||||| ||| | |||||| | |||||| | |||||| |
|
|
| T |
8559637 |
attgctggtcttaatgtaatgcagataatcaatgaaccaactgcagctgctcttgcatatggacttcaaaagagatctaattgtgttaaagagagaaata |
8559538 |
T |
|
| Q |
124 |
tttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcacct |
223 |
Q |
| |
|
|||| |||||||| | |||||||| ||||||||||| ||| | |||||||||||| | || |||||||||| || ||||| | || |||| ||||| |
|
|
| T |
8559537 |
ttttcatctttgatctcggtggtggaacttttgatgtttctcttctcacaattaagaataatctctttgaagtcaaggccacttccggagacacacacct |
8559438 |
T |
|
| Q |
224 |
tgggggagaggacttcgataacagaatggtgaa |
256 |
Q |
| |
|
|| ||||||||||| ||||||||||||||||| |
|
|
| T |
8559437 |
cggaggagaggactttgataacagaatggtgaa |
8559405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 28 - 284
Target Start/End: Complemental strand, 8610217 - 8609961
Alignment:
| Q |
28 |
ctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttt |
127 |
Q |
| |
|
||||||||||||| || || || ||||||||||| || ||||| ||| |||||||||| ||| | |||||| | |||||| || || |||||||||| |
|
|
| T |
8610217 |
ctggccttaatgtaatccggattatcaatgaaccaacggctgcggctcttgcatatggtcttcagaagagagctaattgtgtggaaaatagaaatatttt |
8610118 |
T |
|
| Q |
128 |
tgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttggg |
227 |
Q |
| |
|
| |||||||| | |||||||| ||||| ||||||||| | ||||||||||| ||| || || || || || || || || | ||||||||||| |
|
|
| T |
8610117 |
tatctttgatcttggtggtgggactttcgatgtgtctgttctcacaattaaaaacaatgctttcgatgtcaaggctactgctggagatactcaccttgga |
8610018 |
T |
|
| Q |
228 |
ggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaag |
284 |
Q |
| |
|
||||||||||| ||| |||||||||| ||| | ||||| |||||||||||| |||| |
|
|
| T |
8610017 |
ggagaggactttgatcacagaatggttaatcactttgtgaaggagttcaaaaggaag |
8609961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 357
Target Start/End: Original strand, 7877714 - 7877930
Alignment:
| Q |
141 |
ggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcg |
240 |
Q |
| |
|
|||||||| ||||| ||||||||| | |||||| | || | |||| |||||| |||| ||| || || || | |||||||| || ||||||||||| | |
|
|
| T |
7877714 |
ggtggtggcactttcgatgtgtctcttctcacactaaaagatgatagctttgatgtaatagctactgccggagatactcacctaggtggagaggactttg |
7877813 |
T |
|
| Q |
241 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
340 |
Q |
| |
|
||||||||||| |||| |||| || |||||| || | ||||||||| |||||||| |||| || || | || | ||||||||||||||||| || |
|
|
| T |
7877814 |
ataacagaatgttgaaccatttagtgatggagtttaagaggaagaataaagtggacattggtggaaacccgagggcccttaggaggttgagaactgcatg |
7877913 |
T |
|
| Q |
341 |
tgagagggcaaaaagga |
357 |
Q |
| |
|
||||||||| ||||||| |
|
|
| T |
7877914 |
tgagagggctaaaagga |
7877930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 356
Target Start/End: Complemental strand, 8538340 - 8538008
Alignment:
| Q |
24 |
attgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaata |
123 |
Q |
| |
|
||||||||||| ||||| || || ||||||||||||||||| ||||| ||| ||||||| |||||| | |||||| | |||||| | | |||| |
|
|
| T |
8538340 |
attgctggcctcaatgtaatgcggataatcaatgaacctacagctgctgctcttgcatacggccttcaaaagagagctaattgtgttgaagagagaaaag |
8538241 |
T |
|
| Q |
124 |
tttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcacct |
223 |
Q |
| |
|
|||| |||||||| | |||||||| ||||||||||| ||| |||| ||| | ||| | ||| |||| ||| || ||||| || || | |||||||| |
|
|
| T |
8538240 |
ttttcatctttgatcttggtggtggaacttttgatgtatctctccttacattgaagaataatgcctttacagtcaaggccactgccggagatactcacct |
8538141 |
T |
|
| Q |
224 |
tgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaagg |
323 |
Q |
| |
|
||| ||||||||||| ||||| | |||||||| ||||||| | || || || | ||| || || || ||||| ||||| ||| ||||| | | ||| |
|
|
| T |
8538140 |
tggaggagaggactttgataatcggttggtgaatcattttgtgaatgaattgaagaggaaaaacaaagttgacattagtggaaattcaaaagctctgagg |
8538041 |
T |
|
| Q |
324 |
aggttgagaactgcctgtgagagggcaaaaagg |
356 |
Q |
| |
|
| |||||||||||| || ||||||||||||||| |
|
|
| T |
8538040 |
aagttgagaactgcatgcgagagggcaaaaagg |
8538008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 8590836 - 8590713
Alignment:
| Q |
130 |
tctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttggggg |
229 |
Q |
| |
|
|||||||| | |||||||| ||||||||||||||| | |||||| | || |||||| |||||| ||||||||||| | || | || ||||| || || |
|
|
| T |
8590836 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacactcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg |
8590737 |
T |
|
| Q |
230 |
agaggacttcgataacagaatggt |
253 |
Q |
| |
|
||||||||| |||||||||||||| |
|
|
| T |
8590736 |
agaggactttgataacagaatggt |
8590713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 8102865 - 8102832
Alignment:
| Q |
130 |
tctttgatttgggtggtggtacttttgatgtgtc |
163 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
8102865 |
tctttgatttgggtggtggtacttttgatgtgtc |
8102832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 39985951 - 39985878
Alignment:
| Q |
23 |
tattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaaga |
96 |
Q |
| |
|
|||||| || ||||||||||| ||||| |||||||| || |||||||| || ||||| ||||| |||||||||| |
|
|
| T |
39985951 |
tattgccggtcttaatgtcatgcgaattatcaatgagcccactgctgctgccattgcttatggtcttgacaaga |
39985878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 304; Significance: 1e-171; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 22 - 445
Target Start/End: Original strand, 9335753 - 9336176
Alignment:
| Q |
22 |
ctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaa |
121 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||| ||||||||||| |
|
|
| T |
9335753 |
ctattgctggccttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttgataagagaaatgactgtgatggtaaccgaaa |
9335852 |
T |
|
| Q |
122 |
tatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcac |
221 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||| ||| |
|
|
| T |
9335853 |
tatttttgtctttgatctgggtggcggtacttttgatgtgtctatcctcacaattaagggtgatctatttgaagtaaaagccaccgcaggaaacacgcac |
9335952 |
T |
|
| Q |
222 |
cttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaa |
321 |
Q |
| |
|
||||| || |||||||| |||||||||||||| || |||||||| || ||||| |||||||||||||| |||||||||| ||| ||||||||||||| |
|
|
| T |
9335953 |
cttggaggcgaggactttgataacagaatggttaactattttgtggaagagttaaaaaagaagaataaagtggacatcaagcagaacccaaaatccttaa |
9336052 |
T |
|
| Q |
322 |
ggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttc |
421 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
9336053 |
ggaggttgagaactgcctgtgagagggcaaaaaggatactgtcttttgcttttgttaccactgttgaggtagatgctttatttatgggaatcgacttttc |
9336152 |
T |
|
| Q |
422 |
ttcatcaatcactcgtgccaaatt |
445 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
9336153 |
ttcatcaatcactcgtgccaaatt |
9336176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 18 - 364
Target Start/End: Complemental strand, 30775562 - 30775216
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
117 |
Q |
| |
|
||||| |||||||| |||||||| || ||||||| ||||| || ||||| ||||||||||||||||| ||||| |||||| || ||||| | | | |
|
|
| T |
30775562 |
ggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttgagaagagaggtaggtgtgatgctgaga |
30775463 |
T |
|
| Q |
118 |
gaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacac |
217 |
Q |
| |
|
| |||||||||||||||||| | |||||||| ||||||||||||||| | ||||| |||| | |||||| |||||||| ||||| || || || ||||| |
|
|
| T |
30775462 |
ggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaactgctggaaacac |
30775363 |
T |
|
| Q |
218 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatcc |
317 |
Q |
| |
|
|||| | |||||||||||||| |||||||||||| ||||||| ||||| ||||| || || | |||||| ||||||||||| | |||||||||| | | |
|
|
| T |
30775362 |
tcacatcgggggagaggactttgataacagaatgttgaattactttgtagaggaatttaagacgaagaacaacgtggacattaccgggaatccaagagct |
30775263 |
T |
|
| Q |
318 |
ttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctc |
364 |
Q |
| |
|
|| || |||||||||||| ||||| | ||||||||||| |||||| |
|
|
| T |
30775262 |
ttgagacagttgagaactgcatgtgaaaaggcaaaaaggacactctc |
30775216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 319
Target Start/End: Complemental strand, 35132758 - 35132457
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
117 |
Q |
| |
|
|||||||||||||| | ||||| || || |||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||||| || | | |
|
|
| T |
35132758 |
ggtgctattgctggtcccaatgttatgagagtaatgaatgaacctactgccgcagcggttgcatatggccttgacaagagatctgattgtgctggagaac |
35132659 |
T |
|
| Q |
118 |
gaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacac |
217 |
Q |
| |
|
||||||||||||||| ||| | |||||||| ||||||||||| || || || || ||||||| | ||||||| |||| || ||||| || || ||||| |
|
|
| T |
35132658 |
aaaatatttttgtcttcgatcttggtggtggcacttttgatgtttcaatacttactattaaggataatgtcttccaagttaaggccactgccggaaacac |
35132559 |
T |
|
| Q |
218 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatcc |
317 |
Q |
| |
|
||| || || ||||||||||| ||||||||||||||||| || ||||| | |||||||| | ||||| || || ||||| ||||||||| ||||| || |
|
|
| T |
35132558 |
tcatctcggtggagaggactttgataacagaatggtgaactactttgtacaagagttcaagagaaagaacaaagtagacattagtgggaattcaaaagcc |
35132459 |
T |
|
| Q |
318 |
tt |
319 |
Q |
| |
|
|| |
|
|
| T |
35132458 |
tt |
35132457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 257; Significance: 1e-143; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 18 - 442
Target Start/End: Original strand, 16657375 - 16657799
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
117 |
Q |
| |
|
||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | |
|
|
| T |
16657375 |
ggtgccatcgctggccttaatgtcattcgaattatcaatgaacctactgctgcagctattgcatatggtcttgacaagagaagtgattgtgatggtaaac |
16657474 |
T |
|
| Q |
118 |
gaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacac |
217 |
Q |
| |
|
| ||||||||||||||||| | || |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| || || ||||| |
|
|
| T |
16657475 |
ggaatatttttgtctttgaccttggcggtggtacttttgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccactgccggaaacac |
16657574 |
T |
|
| Q |
218 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatcc |
317 |
Q |
| |
|
||||||||||||||||||||| |||||||||| |||||| || ||||| |||||||| ||||||||||||| |||||||| |||||||| ||| | || |
|
|
| T |
16657575 |
tcaccttgggggagaggactttgataacagaacggtgaactactttgtagaggagtttcaaaagaagaataaggtggacataagtgggaactcaagagcc |
16657674 |
T |
|
| Q |
318 |
ttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgact |
417 |
Q |
| |
|
|| ||||||||||||||||| |||||||||||||| |||| |||||||||| ||||||||||||| |||||||| ||| |||||||| |||||| |||| |
|
|
| T |
16657675 |
ttgaggaggttgagaactgcatgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtagattctttatttcagggaattgact |
16657774 |
T |
|
| Q |
418 |
tttcttcatcaatcactcgtgccaa |
442 |
Q |
| |
|
|||||||||||||||| |||||||| |
|
|
| T |
16657775 |
tttcttcatcaatcacccgtgccaa |
16657799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 18 - 367
Target Start/End: Original strand, 16661850 - 16662199
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
117 |
Q |
| |
|
||||| |||||||||||||| || | | |||||||||||||| ||||| |||||||||||||||||||||||||| |||||| ||||||| ||| | |
|
|
| T |
16661850 |
ggtgccattgctggccttaacgttgtgaggataatcaatgaacccactgcagcagctattgcatatggccttgacaaaagaagtaattgtgatggtgaaa |
16661949 |
T |
|
| Q |
118 |
gaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacac |
217 |
Q |
| |
|
|||||||||||||||||||| | |||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||| | || ||||| |
|
|
| T |
16661950 |
gaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacac |
16662049 |
T |
|
| Q |
218 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatcc |
317 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||| |||| || ||||| | || || || | |||||| || ||||| |||| | ||||||||| | || |
|
|
| T |
16662050 |
tcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagcc |
16662149 |
T |
|
| Q |
318 |
ttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctcttt |
367 |
Q |
| |
|
|| ||||||||||||||| | ||||| | ||| ||||||| ||||||||| |
|
|
| T |
16662150 |
ttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctcttt |
16662199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 49 - 404
Target Start/End: Complemental strand, 14703687 - 14703332
Alignment:
| Q |
49 |
taatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttgtctttgatttgggtggtgg |
148 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||| || || | || ||||| |||||||||||| | |||||||| |
|
|
| T |
14703687 |
taatgaatgaacctacagctgcagctattgcatatggccttgacaagagaactgattatggtggagaacgtaatatatttgtctttgatcttggtggtgg |
14703588 |
T |
|
| Q |
149 |
tacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgataacaga |
248 |
Q |
| |
|
||||||||| |||||| |||| ||||||||||| ||||| || | || || || || || ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
14703587 |
tacttttgacgtgtctctcctaacaattaagggcaccgtcttccaaattaaggctactgctggaaacactcacctcgggggagaggacttcgataacaga |
14703488 |
T |
|
| Q |
249 |
atggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtgagaggg |
348 |
Q |
| |
|
|||||||| || |||||| | |||||||| | || || | ||||||| ||||| ||||||||| |||||||||| |||||||| || || ||||||| |
|
|
| T |
14703487 |
atggtgaactactttgttcaagagttcaagagaaaaaacagattggacattagtggaaatccaaaagccttaaggagcttgagaaccgcttgcgagaggg |
14703388 |
T |
|
| Q |
349 |
caaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttattt |
404 |
Q |
| |
|
||||||| | ||| ||||| ||||| |||| ||||||| |||||||||||| |
|
|
| T |
14703387 |
caaaaagaacactttctttccaagttgtcgccactattgaggtagatgctttattt |
14703332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 54 - 355
Target Start/End: Complemental strand, 7542500 - 7542199
Alignment:
| Q |
54 |
aatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttgtctttgatttgggtggtggtactt |
153 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||||||||||||| ||||| ||| || | |||||||||||||| |||||| | || ||||| |||| |
|
|
| T |
7542500 |
aatgaacctactgccgcagctgttgcatatggccttgacaagagaactgattatgatggagagcgaaatatttttgtttttgatcttggcggtggcactt |
7542401 |
T |
|
| Q |
154 |
ttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgataacagaatggt |
253 |
Q |
| |
|
||||||||||| | || || |||||||| | ||| |||| || ||||| || || |||||||||||||| ||||| ||||| ||||| ||||||| |
|
|
| T |
7542400 |
ttgatgtgtctttactaacgattaagggcaacaacttccaagttaaggccactgctggcaacactcaccttggtggagaagactttgataatagaatggc |
7542301 |
T |
|
| Q |
254 |
gaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaa |
353 |
Q |
| |
|
||| || ||||| | |||||||| | ||||| || |||||||| ||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
7542300 |
gaactactttgtacaagagttcaagagaaagaacaaagtggacattagtgggaatccaaaagccttgaggaggttgagaactgcttgtgagagggcaaaa |
7542201 |
T |
|
| Q |
354 |
ag |
355 |
Q |
| |
|
|| |
|
|
| T |
7542200 |
ag |
7542199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 76 - 355
Target Start/End: Complemental strand, 12234941 - 12234662
Alignment:
| Q |
76 |
ttgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaat |
175 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||| || | |||||||||||||| |||||| | || ||||| ||||||||||||||| |||| ||||| |
|
|
| T |
12234941 |
ttgcatatggtcttgacaagagaactgattgtgttggagaacgaaatatttttgtttttgatctcggcggtggcacttttgatgtgtctctcctaacaat |
12234842 |
T |
|
| Q |
176 |
taagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttc |
275 |
Q |
| |
|
|| ||| ||||||| |||| |||||||| || || ||||||||||| |||||||||||||| |||||||||||||| || || ||| | | |||||| |
|
|
| T |
12234841 |
caaaggtaatgtcttccaagttaaagccacagccggaaacactcacctcgggggagaggactttgataacagaatggtaaactaccttgctcaagagttc |
12234742 |
T |
|
| Q |
276 |
aaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaag |
355 |
Q |
| |
|
|| | ||||| || |||||||| ||||| ||||||||| |||| |||||||| |||||||| ||||||||||||||||| |
|
|
| T |
12234741 |
aatagaaagaaaaaagtggacatgagtggaaatccaaaagccttgaggaggttaagaactgcttgtgagagggcaaaaag |
12234662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 54 - 355
Target Start/End: Original strand, 12258475 - 12258776
Alignment:
| Q |
54 |
aatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttgtctttgatttgggtggtggtactt |
153 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||| |||| | |||||| | || || |||||||||||||||||| | |||||||| |||| |
|
|
| T |
12258475 |
aatgaacctactgctgcagcttttgcatatggccttgacaaaagaattaattgtgtcgaaaaacggaatatttttgtctttgatcttggtggtggcactt |
12258574 |
T |
|
| Q |
154 |
ttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgataacagaatggt |
253 |
Q |
| |
|
||||||||||| | || || ||||||| | |||||||| |||| || || || || || ||||| |||||||| ||||||||||| ||||| |||||||| |
|
|
| T |
12258575 |
ttgatgtgtctctactaaccattaaggataatgtctttcaagttaaggctacagctggaaacacgcaccttggaggagaggactttgataatagaatggt |
12258674 |
T |
|
| Q |
254 |
gaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaa |
353 |
Q |
| |
|
|| ||| ||||| || |||||||| | ||||| || || || || ||||| ||||||| | | || ||||| |||| ||| || |||||||| |||||| |
|
|
| T |
12258675 |
gagttactttgtagaagagttcaagagaaagaacaaagtagatataagtggaaatccaagagctttgaggagattgaaaacagcttgtgagagtgcaaaa |
12258774 |
T |
|
| Q |
354 |
ag |
355 |
Q |
| |
|
|| |
|
|
| T |
12258775 |
ag |
12258776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 49 - 361
Target Start/End: Original strand, 12245295 - 12245607
Alignment:
| Q |
49 |
taatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttgtctttgatttgggtggtgg |
148 |
Q |
| |
|
|||| |||||||| |||||||||||| |||||||||||||||| |||||| |||||||| || | |||| |||||||| |||||| | |||||||| |
|
|
| T |
12245295 |
taatgaatgaacccactgctgcagctgttgcatatggccttgaaaagagagctgattgtgttggagaaagaaacatttttgtgtttgatcttggtggtgg |
12245394 |
T |
|
| Q |
149 |
tacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgataacaga |
248 |
Q |
| |
|
|||||||| || |||||||| || ||||||| | | |||| |||| || ||||| || || |||||||||||||| |||||||| || ||||| ||| |
|
|
| T |
12245395 |
cacttttgacgtttctatcctaactattaaggataacatcttccaagttaaggccactgctggaaacactcaccttggaggagaggattttgataataga |
12245494 |
T |
|
| Q |
249 |
atggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtgagaggg |
348 |
Q |
| |
|
||||| || || |||| |||||||||| | ||||| || |||| || |||| | | ||||| |||| ||||| ||||||||||| |||||||||| |
|
|
| T |
12245495 |
atggtaaactactttgcacaggagttcaagagaaagaacaaattggatattagtgcaagttcaaaagccttgaggagattgagaactgcttgtgagaggg |
12245594 |
T |
|
| Q |
349 |
caaaaaggatact |
361 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
12245595 |
caaaaagaatact |
12245607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 445
Target Start/End: Complemental strand, 43625710 - 43625295
Alignment:
| Q |
30 |
ggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttg |
129 |
Q |
| |
|
||||||||||| | ||| ||||||||||||| || ||||| ||| | ||||| |||||| ||||||||| | |||||| || | ||||||||||| |
|
|
| T |
43625710 |
ggccttaatgttttacgagtaatcaatgaaccaacagctgctgctctagcatacggccttaacaagagaattaattgtgttggagaacgaaatattttca |
43625611 |
T |
|
| Q |
130 |
tctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttggggg |
229 |
Q |
| |
|
||||||| | |||||||||||||||||||||||||| || |||||||||| | ||||| || |||||||| || || |||||||||||||| || |
|
|
| T |
43625610 |
tctttgaccttggtggtggtacttttgatgtgtctatacttacaattaaggacaaggtcttccgtgttaaagccactgctggaaacactcaccttggagg |
43625511 |
T |
|
| Q |
230 |
agaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttg |
329 |
Q |
| |
|
||||||||| ||| | ||||||||||| || |||| || || || | |||||||| || ||||| || | ||| || ||| | || |||| |||||| |
|
|
| T |
43625510 |
agaggactttgatgatagaatggtgaactactttgcagaagaatttgagaagaagaacaatgtggatattattggaaactcaagagccataagaaggttg |
43625411 |
T |
|
| Q |
330 |
agaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaa |
429 |
Q |
| |
|
||||| || || ||||| | |||||||| ||| |||||| ||| ||| ||| ||||||| ||| ||||||| || || ||||| | |||||||| |
|
|
| T |
43625410 |
agaacggcatgcgagagaggaaaaaggacactgtcttttgcttcgttcagcactattgaggtagattctttattccgtggtattgacttcttttcatcaa |
43625311 |
T |
|
| Q |
430 |
tcactcgtgccaaatt |
445 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
43625310 |
tcactcgtgccaaatt |
43625295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 244
Target Start/End: Complemental strand, 11999673 - 11999478
Alignment:
| Q |
49 |
taatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttgtctttgatttgggtggtgg |
148 |
Q |
| |
|
|||| |||||||| ||||||||| || ||||||||||||||||||||||| |||||||| || | |||| ||||| ||||||||| | || ||||| |
|
|
| T |
11999673 |
taatgaatgaacccactgctgcaactgttgcatatggccttgacaagagagctgattgtgttggagaaagaaacattttagtctttgatcttggcggtgg |
11999574 |
T |
|
| Q |
149 |
tacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgataa |
244 |
Q |
| |
|
||||||||| ||||||| || |||||||||| ||||||| |||| || ||||| || || ||||||||| | || |||||||| || ||||| |
|
|
| T |
11999573 |
cacttttgatttgtctatactaacaattaaggacaatgtcttccaagttaaggccacagctggaaacactcacttcggaggagaggattttgataa |
11999478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 11999425 - 11999374
Alignment:
| Q |
310 |
caaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatact |
361 |
Q |
| |
|
||||| |||| ||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
11999425 |
caaaagccttgaggaggttgagaactgcttgtgagagggcaaaaagaatact |
11999374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 349
Target Start/End: Original strand, 17666764 - 17666872
Alignment:
| Q |
241 |
ataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctg |
340 |
Q |
| |
|
||||||||||||||||| | |||||| | |||||||||| ||||| ||| |||||||||||| || |||| | | | | ||||||| | ||||| || |
|
|
| T |
17666764 |
ataacagaatggtgaatcactttgttcaagagttcaaaagaaagaacaacaaggacatcagtggcaacccaagagctcttatgaggttggggactgcttg |
17666863 |
T |
|
| Q |
341 |
tgagagggc |
349 |
Q |
| |
|
||||||||| |
|
|
| T |
17666864 |
tgagagggc |
17666872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 442
Target Start/End: Original strand, 4678416 - 4678839
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaacc |
117 |
Q |
| |
|
||||| |||||||| ||||||||||||| ||||||||| |||||||||| |||||||||||||||||| |||||||||||||||| |||| |||| | |
|
|
| T |
4678416 |
ggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgttgcagctattgcatatggttttgacaagagaagtgaaagtgattgtaaac |
4678515 |
T |
|
| Q |
118 |
gaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacac |
217 |
Q |
| |
|
||||||| ||||||||||| | ||||||||||||||||||||||||||||| | ||| ||||||| ||||||||||||||||||||| || || ||||| |
|
|
| T |
4678516 |
gaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacac |
4678615 |
T |
|
| Q |
218 |
tcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatcc |
317 |
Q |
| |
|
|||||| || ||||||||||| ||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||||| ||| ||| ||||| || |
|
|
| T |
4678616 |
tcacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaaccc |
4678715 |
T |
|
| Q |
318 |
ttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgact |
417 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |||| ||||||||| | ||||||||||| ||||| || ||| |||||||| |||||| |||| |
|
|
| T |
4678716 |
ttaaggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttga-gtagattctttatttcagggaatagact |
4678814 |
T |
|
| Q |
418 |
tttcttcatcaatcactcgtgccaa |
442 |
Q |
| |
|
|||||||||| || ||||||||||| |
|
|
| T |
4678815 |
tttcttcatctattactcgtgccaa |
4678839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 16 - 405
Target Start/End: Complemental strand, 15595353 - 15594957
Alignment:
| Q |
16 |
caggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctg-------cagctattgcatatggccttgacaagagaagtgattgtg |
108 |
Q |
| |
|
||||||| ||||||||||||||||| || || ||||||||||||| || |||| |||||||||||||||||||||||||||| | | | |||| |
|
|
| T |
15595353 |
caggtgccattgctggccttaatgttatacgggtaatcaatgaaccgacagctgacagctgcagctattgcatatggccttgacaagaggattaactgtg |
15595254 |
T |
|
| Q |
109 |
agggtaaccgaaatatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgc |
208 |
Q |
| |
|
|| | |||||||||||||||||||| | |||||||| |||||||||||||||||||| |||||||||| | ||||| |||| || ||||| | |
|
|
| T |
15595253 |
ttggagaaagaaatatttttgtctttgatcttggtggtggcacttttgatgtgtctatcctaacaattaaggacaaggtcttccaagttaaggccacagg |
15595154 |
T |
|
| Q |
209 |
aggtaacactcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaat |
308 |
Q |
| |
|
|| |||||||||||||| ||||||||||| |||||||||||||| || || |||| |||| ||||| | |||||| || ||||| || | |||||| |
|
|
| T |
15595153 |
cggaaacactcaccttggaggagaggactttgataacagaatggtcaactactttgcgcaggaattcaagacgaagaacaaagtggatattactgggaac |
15595054 |
T |
|
| Q |
309 |
ccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttattta |
405 |
Q |
| |
|
|||| |||| ||||| ||||||||||| || || |||||||||||| ||||||||||| || |||||| ||| ||||||| ||| |||||||| |
|
|
| T |
15595053 |
ccaagggccttgaggagattgagaactgcgtgcgaaagggcaaaaagggtactctcttttactactgtcactaccattgaggtagattgtttattta |
15594957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 22 - 252
Target Start/End: Original strand, 34466655 - 34466885
Alignment:
| Q |
22 |
ctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaa |
121 |
Q |
| |
|
||||||||||||||||||| | | ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||| | || || | |||| |
|
|
| T |
34466655 |
ctattgctggccttaatgttttgcaaataatcaatgaacccactgctgcagctattgcatatggacttgacaagagagctgactttgtggaagaaggaaa |
34466754 |
T |
|
| Q |
122 |
tatttttgtctttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcac |
221 |
Q |
| |
|
|||||| |||||||| | |||||||| ||||||||||||||| |||| |||||||||| | ||||||||||||| || ||||| | |||||||||||| |
|
|
| T |
34466755 |
tattttcgtctttgaccttggtggtgggacttttgatgtgtctctccttacaattaaggataatgtctttgaagttaaggccacttctggtaacactcac |
34466854 |
T |
|
| Q |
222 |
cttgggggagaggacttcgataacagaatgg |
252 |
Q |
| |
|
|| || |||||||||| ||||| ||||||| |
|
|
| T |
34466855 |
ctcggacgagaggactttgataatagaatgg |
34466885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 201 - 404
Target Start/End: Complemental strand, 28220045 - 28219842
Alignment:
| Q |
201 |
gccaccgcaggtaacactcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatca |
300 |
Q |
| |
|
|||||||| || ||||||||||| |||||||||||||| |||| || |||||||| || || | |||||||| || |||||||| || |||||||| | |
|
|
| T |
28220045 |
gccaccgctggaaacactcacctcgggggagaggactttgatagtaggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacatta |
28219946 |
T |
|
| Q |
301 |
gtgggaatccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgcttt |
400 |
Q |
| |
|
||| || ||| | ||||||||||||||||||| || || |||| |||||||||| ||| |||||| || ||||| ||||| ||||||| ||| |||| |
|
|
| T |
28219945 |
ctggaaactcaagagccttaaggaggttgagaacagcgtgcaagagagcaaaaaggacactatcttttgctgttgtcgccaccattgaggtagattcttt |
28219846 |
T |
|
| Q |
401 |
attt |
404 |
Q |
| |
|
|||| |
|
|
| T |
28219845 |
attt |
28219842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 169
Target Start/End: Complemental strand, 28220227 - 28220110
Alignment:
| Q |
52 |
tcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttgtctttgatttgggtggtggtac |
151 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||| | ||||| |||| | | || ||| | ||||||||||| ||||||| |||||||||| || |
|
|
| T |
28220227 |
tcaatgaacccactgctgctgctattgcatatggattggacaaaagaactaactgcatgggagaacgaaatattttcatctttgacctgggtggtgggac |
28220128 |
T |
|
| Q |
152 |
ttttgatgtgtctatcct |
169 |
Q |
| |
|
||||||||||||| |||| |
|
|
| T |
28220127 |
ttttgatgtgtctctcct |
28220110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 213 - 404
Target Start/End: Complemental strand, 43744931 - 43744740
Alignment:
| Q |
213 |
aacactcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaa |
312 |
Q |
| |
|
||||||||||| || |||||||| || ||||| || |||||||| || || | |||||||| || |||||||| || |||||||| | ||| || |||| |
|
|
| T |
43744931 |
aacactcacctcggaggagaggattttgataataggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacattactggaaacccaa |
43744832 |
T |
|
| Q |
313 |
aatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttattt |
404 |
Q |
| |
|
| | ||||||||||||||||| || || || || |||||||||| | | |||||| || |||||||||| ||||||| ||| |||||||| |
|
|
| T |
43744831 |
gagcattaaggaggttgagaacagcatgcgaaagagcaaaaaggacattatcttttgctgttgtcaccactattgaggtagattctttattt |
43744740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 43745129 - 43744997
Alignment:
| Q |
48 |
ataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttgtctttgatttgggtggtg |
147 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| || || ||||||| | | | || | | |||||||||| ||||||| ||||||||| |
|
|
| T |
43745129 |
ataatcaatgaacccactgctgcagctattgcatatggtctggaaaagagaactaactctgtgcgaggaagaaatattttcatctttgacctgggtggtg |
43745030 |
T |
|
| Q |
148 |
gtacttttgatgtgtctatcctcacaattaagg |
180 |
Q |
| |
|
| ||||||||||||||| |||| |||||||||| |
|
|
| T |
43745029 |
ggacttttgatgtgtctctccttacaattaagg |
43744997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 357
Target Start/End: Complemental strand, 12528688 - 12528475
Alignment:
| Q |
144 |
ggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggagaggacttcgata |
243 |
Q |
| |
|
||||| ||||||||||||||| | || ||| | ||| | ||||||| ||||| || ||||| || || ||||||||||||| ||||||||||| |||| |
|
|
| T |
12528688 |
ggtggaacttttgatgtgtctcttcttacagtaaagaataatgtcttcgaagtcaaggccactgccggagacactcaccttggaggagaggactttgata |
12528589 |
T |
|
| Q |
244 |
acagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtga |
343 |
Q |
| |
|
| ||||||||||| | ||||| | ||||| || | |||||| || || ||||| | |||||| ||||| || ||||||| ||||||||| ||| || |
|
|
| T |
12528588 |
atcgaatggtgaatcactttgtgaaagagtttaagaggaagaacaaagttgacattattgggaactcaaaagccctaaggagattgagaactaactgcga |
12528489 |
T |
|
| Q |
344 |
gagggcaaaaagga |
357 |
Q |
| |
|
|| ||| ||||||| |
|
|
| T |
12528488 |
gaaggcgaaaagga |
12528475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 44; Significance: 7e-16; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 33 - 256
Target Start/End: Complemental strand, 28910877 - 28910654
Alignment:
| Q |
33 |
cttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttgtct |
132 |
Q |
| |
|
|||||||| || || ||||||||||| | ||||||| ||||||| |||||||||| ||||||||| ||| |||| || | ||||||| ||| ||| |
|
|
| T |
28910877 |
cttaatgttatgcggataatcaatgagctcactgctgtagctatttcatatggcctcgacaagagagctgagtgtgctggagaacgaaatactttcatct |
28910778 |
T |
|
| Q |
133 |
ttgatttgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccaccgcaggtaacactcaccttgggggaga |
232 |
Q |
| |
|
| || ||||| |||| ||||||||||| ||| |||| |||||| ||| | | ||||| |||| || |||||||| || ||||||||||| |||| || |
|
|
| T |
28910777 |
tcgacctgggtagtgggacttttgatgtttctctccttacaattcaggataaggtcttccaagttaaggccaccgctggaaacactcacctcggggtcga |
28910678 |
T |
|
| Q |
233 |
ggacttcgataacagaatggtgaa |
256 |
Q |
| |
|
|||| | ||||| || |||||||| |
|
|
| T |
28910677 |
ggacattgataataggatggtgaa |
28910654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 11170880 - 11170806
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgac |
92 |
Q |
| |
|
||||||||||||||||| ||||| | |||||| ||||||| |||||||| || || |||||||||||||||||| |
|
|
| T |
11170880 |
ggtgctattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggccttgac |
11170806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 11156580 - 11156505
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgaca |
93 |
Q |
| |
|
|||| |||||||||||| ||||| || |||||||||||||| ||| |||| || || ||||||||||| ||||||| |
|
|
| T |
11156580 |
ggtgttattgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgaca |
11156505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 11197033 - 11196958
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgaca |
93 |
Q |
| |
|
|||| |||||||||||| ||||| || |||||||||||||| ||| |||| || || ||||||||||| ||||||| |
|
|
| T |
11197033 |
ggtgttattgctggcctcaatgttatgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgaca |
11196958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 11200198 - 11200123
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgaca |
93 |
Q |
| |
|
||||||||||||||||| ||||| | |||||||||||||| ||| |||| || || ||||||||||| ||||||| |
|
|
| T |
11200198 |
ggtgctattgctggcctcaatgttttgcgaataatcaatgagccttctgcagctgcaattgcatatggtcttgaca |
11200123 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 11314610 - 11314659
Alignment:
| Q |
34 |
ttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatat |
83 |
Q |
| |
|
|||||||||| | ||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
11314610 |
ttaatgtcatgcaaataatcaatgaacctagtgctgcagccattgcatat |
11314659 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 11209702 - 11209634
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggc |
86 |
Q |
| |
|
||||||||||||||||| ||||| | |||||| ||||||| |||||||| || || |||||||||||| |
|
|
| T |
11209702 |
ggtgctattgctggcctcaatgttttgcgaatactcaatgagcctactgcagctgcaattgcatatggc |
11209634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 11276264 - 11276196
Alignment:
| Q |
18 |
ggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggc |
86 |
Q |
| |
|
||||||||||||||||| || || || |||||||| ||||| |||||||| || || |||||||||||| |
|
|
| T |
11276264 |
ggtgctattgctggcctaaacgttatgcgaataataaatgagcctactgcagctgcaattgcatatggc |
11276196 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1207 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1207
Description:
Target: scaffold1207; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 1197 - 1120
Alignment:
| Q |
16 |
caggtgctattgctggccttaatgtcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgaca |
93 |
Q |
| |
|
||||||||||||||||||| ||||| | ||||| ||||||| |||||||| || || |||||||||||| |||||| |
|
|
| T |
1197 |
caggtgctattgctggcctcaatgttttgggaatactcaatgagcctactgcagctgcaattgcatatggctttgaca |
1120 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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