View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9656_high_24 (Length: 272)
Name: NF9656_high_24
Description: NF9656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9656_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 36273794 - 36274035
Alignment:
| Q |
17 |
aaaaagtatccacatttggtggatattgggagagaaatagtgaaaaaatgtagaggaattcctttggtattgagaacattaggcagtttactattttcaa |
116 |
Q |
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| T |
36273794 |
aaaaagtatccacatttggtggatattgggagagaaatagtgaaaaaatgaagaggaattcctttggtattgagaacattaggcagtttactattttcaa |
36273893 |
T |
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| Q |
117 |
aatatgagacatatgagtggaagtacataagagacaatgaaatttggaatacacaagacagaagtttcattttacctgcacttgagttaagctgtactca |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |
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| T |
36273894 |
aatatgagacatatgagtggaagtacataagagacaatgaaatttggaatacacaagacagaggtttcattttacctgcacttgagttaagttgtactca |
36273993 |
T |
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| Q |
217 |
aatgccatactatttgaaggactgttttgccttgttctccct |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
36273994 |
aatgccatactatttgaaggactgttttgccttgttctccct |
36274035 |
T |
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