View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9656_low_30 (Length: 366)

Name: NF9656_low_30
Description: NF9656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9656_low_30
NF9656_low_30
[»] chr8 (61 HSPs)
chr8 (1-352)||(9700083-9700434)
chr8 (10-75)||(16162851-16162916)
chr8 (1-76)||(14926895-14926970)
chr8 (4-59)||(1664454-1664509)
chr8 (14-76)||(1117402-1117464)
chr8 (4-74)||(10075468-10075538)
chr8 (4-77)||(7918694-7918766)
chr8 (7-80)||(31862580-31862652)
chr8 (4-72)||(4763979-4764047)
chr8 (18-73)||(44236739-44236794)
chr8 (32-78)||(31891924-31891970)
chr8 (4-74)||(43393687-43393757)
chr8 (1-74)||(28769254-28769327)
chr8 (5-68)||(1561363-1561426)
chr8 (4-71)||(10062059-10062126)
chr8 (4-75)||(10437968-10438039)
chr8 (4-55)||(24326116-24326167)
chr8 (42-77)||(27493060-27493095)
chr8 (20-75)||(31884854-31884909)
chr8 (5-71)||(2091849-2091915)
chr8 (8-74)||(6526167-6526233)
chr8 (19-73)||(7008698-7008752)
chr8 (13-75)||(7714336-7714398)
chr8 (20-70)||(18331815-18331865)
chr8 (15-69)||(29592488-29592542)
chr8 (4-78)||(30191052-30191126)
chr8 (8-70)||(34770957-34771019)
chr8 (18-72)||(43368617-43368671)
chr8 (4-65)||(6950407-6950468)
chr8 (18-70)||(10488562-10488614)
chr8 (15-75)||(20186378-20186438)
chr8 (15-75)||(20205445-20205505)
chr8 (22-78)||(33553343-33553399)
chr8 (39-75)||(38602447-38602483)
chr8 (21-73)||(43043770-43043822)
chr8 (4-59)||(1889065-1889120)
chr8 (5-76)||(7648063-7648134)
chr8 (35-78)||(16825454-16825497)
chr8 (39-78)||(30251365-30251404)
chr8 (39-78)||(37461261-37461300)
chr8 (1-64)||(39881646-39881709)
chr8 (26-73)||(42215216-42215263)
chr8 (8-78)||(2487919-2487989)
chr8 (8-78)||(2606138-2606208)
chr8 (1-63)||(7853461-7853523)
chr8 (5-67)||(8629199-8629261)
chr8 (32-70)||(9130238-9130276)
chr8 (20-74)||(25872340-25872394)
chr8 (15-57)||(29592129-29592171)
chr8 (31-76)||(38874817-38874862)
chr8 (32-73)||(43045641-43045682)
chr8 (13-57)||(2213502-2213546)
chr8 (4-71)||(3092542-3092607)
chr8 (4-56)||(4049784-4049836)
chr8 (21-69)||(4560604-4560652)
chr8 (7-59)||(10923684-10923736)
chr8 (4-72)||(11569374-11569442)
chr8 (4-72)||(26479870-26479938)
chr8 (29-73)||(29699381-29699425)
chr8 (20-52)||(39049373-39049405)
chr8 (13-53)||(44401654-44401694)
[»] chr3 (56 HSPs)
chr3 (4-75)||(51929826-51929897)
chr3 (10-75)||(44014712-44014777)
chr3 (25-72)||(40240738-40240785)
chr3 (8-70)||(50211824-50211886)
chr3 (4-72)||(49845457-49845525)
chr3 (8-58)||(2304202-2304252)
chr3 (8-70)||(44295616-44295678)
chr3 (4-70)||(45590736-45590802)
chr3 (13-70)||(21872214-21872271)
chr3 (7-76)||(32663726-32663795)
chr3 (4-76)||(2100092-2100164)
chr3 (20-76)||(25459543-25459599)
chr3 (4-64)||(27795938-27795998)
chr3 (1-77)||(34958375-34958451)
chr3 (25-72)||(11041376-11041423)
chr3 (7-58)||(22667491-22667542)
chr3 (7-58)||(22724130-22724181)
chr3 (4-70)||(2413598-2413664)
chr3 (13-71)||(11253595-11253653)
chr3 (8-70)||(20210847-20210909)
chr3 (32-70)||(24684741-24684779)
chr3 (32-69)||(584159-584196)
chr3 (13-70)||(36189723-36189780)
chr3 (4-57)||(48807784-48807837)
chr3 (4-44)||(1810062-1810102)
chr3 (22-70)||(31512486-31512534)
chr3 (8-76)||(41057244-41057312)
chr3 (25-65)||(41644369-41644409)
chr3 (18-78)||(45541670-45541730)
chr3 (7-71)||(49605769-49605833)
chr3 (22-78)||(53891806-53891862)
chr3 (22-73)||(3622364-3622415)
chr3 (4-55)||(11041160-11041211)
chr3 (15-70)||(22055651-22055705)
chr3 (26-57)||(23326123-23326154)
chr3 (12-71)||(37138375-37138434)
chr3 (8-75)||(50015975-50016042)
chr3 (5-70)||(1288768-1288831)
chr3 (41-78)||(5407365-5407402)
chr3 (4-57)||(12985295-12985348)
chr3 (4-71)||(25182908-25182972)
chr3 (6-47)||(30750085-30750126)
chr3 (22-63)||(39769640-39769681)
chr3 (4-69)||(42809378-42809443)
chr3 (20-57)||(49465869-49465906)
chr3 (21-70)||(49916564-49916613)
chr3 (31-76)||(53762307-53762352)
chr3 (42-78)||(1820043-1820079)
chr3 (41-77)||(15304280-15304316)
chr3 (4-64)||(24625267-24625327)
chr3 (13-77)||(26320009-26320073)
chr3 (32-76)||(39980842-39980886)
chr3 (24-64)||(41848641-41848681)
chr3 (4-36)||(47584535-47584567)
chr3 (22-70)||(50760694-50760742)
chr3 (22-66)||(52440584-52440628)
[»] chr6 (45 HSPs)
chr6 (4-73)||(2460067-2460136)
chr6 (4-76)||(4325218-4325290)
chr6 (18-81)||(12111066-12111129)
chr6 (5-71)||(10016709-10016775)
chr6 (15-59)||(6742907-6742951)
chr6 (4-59)||(3217042-3217097)
chr6 (18-65)||(3738200-3738247)
chr6 (4-59)||(32917282-32917337)
chr6 (32-74)||(32205928-32205970)
chr6 (8-70)||(35070386-35070448)
chr6 (19-76)||(8010457-8010514)
chr6 (26-71)||(34531507-34531552)
chr6 (8-52)||(316750-316794)
chr6 (10-74)||(21959792-21959855)
chr6 (18-70)||(34403954-34404006)
chr6 (25-57)||(34429646-34429678)
chr6 (32-71)||(835179-835218)
chr6 (4-70)||(8420115-8420182)
chr6 (4-71)||(19752724-19752791)
chr6 (13-68)||(26559160-26559215)
chr6 (4-75)||(30863331-30863402)
chr6 (13-68)||(31327527-31327582)
chr6 (22-73)||(32861645-32861696)
chr6 (13-71)||(2727801-2727859)
chr6 (5-59)||(3180999-3181053)
chr6 (20-70)||(7148767-7148817)
chr6 (4-77)||(7485051-7485122)
chr6 (4-70)||(7901750-7901816)
chr6 (33-71)||(9202903-9202941)
chr6 (4-42)||(31668442-31668480)
chr6 (20-70)||(33737831-33737881)
chr6 (32-73)||(103543-103584)
chr6 (20-69)||(738461-738510)
chr6 (4-73)||(2795346-2795415)
chr6 (7-72)||(28005473-28005538)
chr6 (32-65)||(31338090-31338123)
chr6 (32-76)||(848102-848145)
chr6 (42-78)||(9109025-9109061)
chr6 (1-45)||(10353705-10353749)
chr6 (22-70)||(13908343-13908391)
chr6 (1-57)||(27897173-27897229)
chr6 (18-58)||(29052850-29052890)
chr6 (39-75)||(30536879-30536915)
chr6 (22-70)||(31776191-31776239)
chr6 (4-48)||(33500421-33500465)
[»] chr4 (58 HSPs)
chr4 (4-73)||(27123268-27123337)
chr4 (4-71)||(18512433-18512500)
chr4 (10-70)||(56186817-56186877)
chr4 (5-76)||(7367967-7368038)
chr4 (21-76)||(21953375-21953430)
chr4 (20-71)||(28615435-28615486)
chr4 (1-76)||(47399567-47399642)
chr4 (18-68)||(32420979-32421029)
chr4 (4-70)||(55870261-55870327)
chr4 (4-69)||(2977896-2977961)
chr4 (21-70)||(24193634-24193683)
chr4 (9-70)||(46187828-46187889)
chr4 (4-56)||(18628486-18628538)
chr4 (4-68)||(19429391-19429455)
chr4 (4-68)||(25896869-25896933)
chr4 (39-74)||(17822780-17822815)
chr4 (4-71)||(17975255-17975322)
chr4 (13-68)||(50746069-50746124)
chr4 (13-67)||(1017122-1017176)
chr4 (26-68)||(3637299-3637341)
chr4 (32-78)||(18815136-18815182)
chr4 (8-70)||(32421189-32421251)
chr4 (32-74)||(39691064-39691106)
chr4 (6-71)||(11264388-11264453)
chr4 (33-78)||(23319965-23320010)
chr4 (22-58)||(1075561-1075597)
chr4 (27-75)||(22662165-22662213)
chr4 (27-75)||(22666644-22666692)
chr4 (32-76)||(35571544-35571588)
chr4 (8-76)||(47146033-47146101)
chr4 (4-76)||(53315411-53315483)
chr4 (5-73)||(56007765-56007833)
chr4 (7-70)||(2811559-2811622)
chr4 (10-57)||(4691939-4691986)
chr4 (4-67)||(10365860-10365923)
chr4 (39-78)||(27043741-27043780)
chr4 (4-59)||(33534099-33534154)
chr4 (43-78)||(42403934-42403969)
chr4 (4-67)||(46860003-46860066)
chr4 (4-70)||(9316610-9316676)
chr4 (8-70)||(37575855-37575917)
chr4 (14-76)||(52333693-52333755)
chr4 (13-78)||(29126174-29126239)
chr4 (18-59)||(30338545-30338586)
chr4 (49-78)||(41512769-41512798)
chr4 (4-69)||(43371905-43371969)
chr4 (4-57)||(44320034-44320087)
chr4 (32-73)||(54426156-54426197)
chr4 (8-63)||(21469848-21469904)
chr4 (20-76)||(22772389-22772445)
chr4 (18-70)||(22796754-22796806)
chr4 (24-64)||(25487482-25487522)
chr4 (40-76)||(32769500-32769536)
chr4 (4-76)||(36462102-36462174)
chr4 (33-77)||(44638138-44638182)
chr4 (4-78)||(53943691-53943762)
chr4 (4-76)||(54277236-54277308)
chr4 (32-76)||(55414326-55414370)
[»] chr7 (56 HSPs)
chr7 (8-78)||(529451-529521)
chr7 (8-58)||(8094395-8094445)
chr7 (8-70)||(23214944-23215006)
chr7 (25-77)||(17988945-17988997)
chr7 (18-70)||(40598404-40598456)
chr7 (4-70)||(1418504-1418570)
chr7 (4-78)||(33894712-33894786)
chr7 (4-76)||(13960637-13960708)
chr7 (7-70)||(31341223-31341286)
chr7 (32-78)||(25596145-25596191)
chr7 (4-70)||(30751604-30751670)
chr7 (6-76)||(40734731-40734801)
chr7 (4-70)||(47041958-47042024)
chr7 (7-72)||(2047959-2048024)
chr7 (13-74)||(8427107-8427168)
chr7 (18-71)||(29363607-29363660)
chr7 (8-80)||(17942160-17942232)
chr7 (4-80)||(28727672-28727748)
chr7 (4-56)||(30496790-30496842)
chr7 (4-76)||(35267434-35267506)
chr7 (4-68)||(39542221-39542285)
chr7 (32-76)||(40252036-40252080)
chr7 (15-75)||(44289957-44290017)
chr7 (12-68)||(46091686-46091742)
chr7 (23-70)||(5276594-5276641)
chr7 (14-69)||(32791665-32791720)
chr7 (39-90)||(37064367-37064418)
chr7 (21-71)||(3019885-3019935)
chr7 (23-69)||(7513663-7513709)
chr7 (18-76)||(12234802-12234860)
chr7 (13-71)||(29287320-29287378)
chr7 (4-78)||(34754721-34754795)
chr7 (7-57)||(42839911-42839961)
chr7 (32-69)||(25659805-25659842)
chr7 (4-53)||(28165176-28165225)
chr7 (18-71)||(28691754-28691807)
chr7 (27-64)||(29269474-29269511)
chr7 (21-70)||(46281061-46281110)
chr7 (26-71)||(47046026-47046071)
chr7 (12-64)||(1710822-1710874)
chr7 (13-73)||(3610656-3610716)
chr7 (8-68)||(3836604-3836664)
chr7 (42-74)||(4970707-4970739)
chr7 (8-56)||(5288200-5288248)
chr7 (4-72)||(6977501-6977569)
chr7 (4-76)||(12242329-12242401)
chr7 (4-68)||(12792419-12792483)
chr7 (20-72)||(24363517-24363569)
chr7 (7-71)||(27517223-27517287)
chr7 (20-75)||(28128316-28128369)
chr7 (7-63)||(29278742-29278798)
chr7 (39-71)||(30134252-30134284)
chr7 (8-64)||(33871330-33871386)
chr7 (32-76)||(34083521-34083565)
chr7 (32-76)||(36517690-36517734)
chr7 (42-78)||(40371565-40371601)
[»] chr1 (69 HSPs)
chr1 (8-78)||(10199319-10199389)
chr1 (4-69)||(6659765-6659830)
chr1 (15-71)||(52013983-52014039)
chr1 (4-74)||(32515356-32515426)
chr1 (18-72)||(33723299-33723353)
chr1 (13-75)||(9602568-9602630)
chr1 (18-76)||(15558310-15558368)
chr1 (22-67)||(2832075-2832120)
chr1 (11-76)||(24460314-24460379)
chr1 (15-68)||(29793619-29793672)
chr1 (4-69)||(42550280-42550345)
chr1 (4-72)||(4033934-4034002)
chr1 (18-78)||(14128382-14128442)
chr1 (13-77)||(21002249-21002313)
chr1 (4-76)||(26866398-26866470)
chr1 (18-78)||(43420357-43420417)
chr1 (20-71)||(1565064-1565115)
chr1 (13-76)||(4276563-4276626)
chr1 (4-71)||(26400063-26400130)
chr1 (7-70)||(28467521-28467584)
chr1 (9-76)||(29793847-29793914)
chr1 (4-58)||(1662658-1662712)
chr1 (4-70)||(3319865-3319931)
chr1 (1-75)||(7217988-7218062)
chr1 (4-58)||(9507316-9507370)
chr1 (4-53)||(4118807-4118856)
chr1 (19-67)||(2522696-2522744)
chr1 (4-68)||(5157157-5157221)
chr1 (20-68)||(11893514-11893562)
chr1 (20-64)||(15515657-15515701)
chr1 (18-58)||(24279848-24279888)
chr1 (16-68)||(49282635-49282686)
chr1 (39-78)||(2295311-2295350)
chr1 (13-68)||(4757432-4757487)
chr1 (4-59)||(16980888-16980943)
chr1 (4-71)||(32958722-32958789)
chr1 (4-75)||(37272508-37272579)
chr1 (4-70)||(4180652-4180718)
chr1 (20-70)||(6292593-6292643)
chr1 (32-78)||(15477666-15477712)
chr1 (20-70)||(24313595-24313645)
chr1 (33-71)||(30013997-30014035)
chr1 (4-54)||(30457977-30458027)
chr1 (8-58)||(31517671-31517721)
chr1 (18-68)||(32859868-32859918)
chr1 (20-58)||(35017683-35017721)
chr1 (41-71)||(37431858-37431888)
chr1 (13-59)||(37593614-37593660)
chr1 (32-74)||(40303994-40304036)
chr1 (31-69)||(42575389-42575427)
chr1 (20-57)||(6231748-6231785)
chr1 (7-68)||(7707278-7707339)
chr1 (4-65)||(15489197-15489258)
chr1 (12-69)||(24417655-24417712)
chr1 (14-59)||(25944536-25944581)
chr1 (22-67)||(29723592-29723637)
chr1 (4-68)||(30257768-30257833)
chr1 (21-70)||(33975676-33975725)
chr1 (33-70)||(50644174-50644211)
chr1 (13-77)||(3597193-3597257)
chr1 (13-57)||(14737658-14737702)
chr1 (20-76)||(17269351-17269407)
chr1 (4-76)||(23373226-23373298)
chr1 (34-70)||(29045852-29045888)
chr1 (10-70)||(34536249-34536309)
chr1 (44-76)||(36523201-36523233)
chr1 (20-72)||(37241738-37241789)
chr1 (4-76)||(40751035-40751106)
chr1 (4-44)||(43371836-43371876)
[»] chr5 (63 HSPs)
chr5 (4-76)||(14599285-14599357)
chr5 (4-68)||(31723890-31723954)
chr5 (15-78)||(9174912-9174975)
chr5 (13-74)||(40335788-40335849)
chr5 (4-72)||(25720334-25720402)
chr5 (1-77)||(41277274-41277350)
chr5 (15-78)||(8651263-8651326)
chr5 (19-78)||(11153357-11153416)
chr5 (4-71)||(34198506-34198573)
chr5 (32-78)||(7705909-7705955)
chr5 (4-69)||(21782576-21782641)
chr5 (20-73)||(25705575-25705628)
chr5 (4-76)||(12242623-12242695)
chr5 (24-72)||(26004914-26004962)
chr5 (18-70)||(36796626-36796678)
chr5 (8-59)||(444011-444062)
chr5 (27-74)||(6938648-6938695)
chr5 (4-71)||(10638453-10638520)
chr5 (9-68)||(10771809-10771868)
chr5 (4-71)||(11297114-11297181)
chr5 (4-75)||(38028621-38028692)
chr5 (8-70)||(11104994-11105056)
chr5 (6-72)||(35135569-35135635)
chr5 (4-82)||(42180992-42181070)
chr5 (4-65)||(8090021-8090082)
chr5 (20-69)||(13508541-13508590)
chr5 (41-78)||(35299887-35299924)
chr5 (4-64)||(4855780-4855840)
chr5 (4-84)||(10303881-10303961)
chr5 (24-68)||(11615575-11615619)
chr5 (4-60)||(12407659-12407715)
chr5 (20-68)||(14706205-14706253)
chr5 (4-68)||(14980594-14980658)
chr5 (32-72)||(16937800-16937840)
chr5 (4-76)||(35960498-35960569)
chr5 (4-75)||(7550432-7550503)
chr5 (39-78)||(14331486-14331525)
chr5 (22-73)||(17368775-17368826)
chr5 (5-84)||(34975450-34975528)
chr5 (22-57)||(41112830-41112865)
chr5 (18-68)||(2092458-2092508)
chr5 (32-70)||(8820873-8820911)
chr5 (22-72)||(17369306-17369356)
chr5 (18-59)||(1899252-1899293)
chr5 (29-66)||(5946487-5946524)
chr5 (26-71)||(6717221-6717266)
chr5 (11-76)||(6773298-6773363)
chr5 (18-59)||(11457197-11457238)
chr5 (4-53)||(17259302-17259351)
chr5 (7-68)||(19177533-19177594)
chr5 (4-73)||(29336715-29336784)
chr5 (20-57)||(32172754-32172791)
chr5 (40-77)||(39594928-39594965)
chr5 (39-71)||(6715869-6715901)
chr5 (20-76)||(10391443-10391499)
chr5 (39-75)||(10640073-10640109)
chr5 (20-72)||(10798341-10798393)
chr5 (1-57)||(11095427-11095483)
chr5 (26-74)||(18897633-18897681)
chr5 (8-68)||(32849267-32849327)
chr5 (18-58)||(34117479-34117519)
chr5 (18-58)||(39257325-39257365)
chr5 (26-74)||(42034167-42034215)
[»] scaffold0199 (1 HSPs)
scaffold0199 (4-59)||(6895-6950)
[»] chr2 (62 HSPs)
chr2 (13-72)||(41170704-41170763)
chr2 (4-78)||(9996823-9996897)
chr2 (8-70)||(13866967-13867029)
chr2 (13-74)||(15370238-15370299)
chr2 (21-78)||(28810363-28810420)
chr2 (4-71)||(6547974-6548041)
chr2 (4-71)||(15120268-15120335)
chr2 (3-77)||(10563472-10563546)
chr2 (4-70)||(11513981-11514047)
chr2 (8-74)||(28803445-28803511)
chr2 (11-76)||(2964722-2964787)
chr2 (22-78)||(33931481-33931537)
chr2 (1-69)||(43456627-43456695)
chr2 (32-75)||(449960-450003)
chr2 (4-71)||(3078526-3078593)
chr2 (5-64)||(35809953-35810012)
chr2 (4-70)||(36677737-36677804)
chr2 (8-70)||(22878187-22878249)
chr2 (20-70)||(35329737-35329787)
chr2 (22-80)||(43259938-43259996)
chr2 (18-78)||(2790337-2790397)
chr2 (13-57)||(29430852-29430896)
chr2 (18-66)||(33981222-33981270)
chr2 (18-70)||(35713286-35713338)
chr2 (22-58)||(39567945-39567981)
chr2 (18-74)||(40759259-40759315)
chr2 (4-75)||(1318321-1318391)
chr2 (20-75)||(12313087-12313142)
chr2 (18-57)||(14302921-14302960)
chr2 (32-71)||(18179062-18179101)
chr2 (7-70)||(33197180-33197243)
chr2 (4-78)||(757534-757608)
chr2 (6-72)||(3973629-3973695)
chr2 (42-76)||(26202151-26202185)
chr2 (4-74)||(37474850-37474919)
chr2 (23-76)||(1830143-1830196)
chr2 (32-73)||(5043476-5043517)
chr2 (41-78)||(7928209-7928246)
chr2 (26-71)||(24097916-24097961)
chr2 (40-73)||(27317500-27317533)
chr2 (32-73)||(33503111-33503152)
chr2 (13-74)||(37276838-37276899)
chr2 (32-73)||(37448693-37448734)
chr2 (8-77)||(38076985-38077054)
chr2 (8-73)||(39983434-39983499)
chr2 (20-73)||(43569808-43569861)
chr2 (8-73)||(43910929-43910993)
chr2 (32-68)||(1633421-1633457)
chr2 (4-59)||(3673893-3673949)
chr2 (40-76)||(4607046-4607082)
chr2 (40-76)||(6772446-6772482)
chr2 (14-78)||(11063288-11063352)
chr2 (19-59)||(14666648-14666688)
chr2 (5-73)||(15200249-15200317)
chr2 (5-69)||(21280273-21280337)
chr2 (18-58)||(25609895-25609935)
chr2 (27-71)||(30990357-30990401)
chr2 (20-52)||(31739919-31739951)
chr2 (24-76)||(35378445-35378497)
chr2 (20-68)||(35810726-35810774)
chr2 (18-78)||(38767493-38767553)
chr2 (7-71)||(45425299-45425363)
[»] scaffold0020 (1 HSPs)
scaffold0020 (14-75)||(159887-159948)
[»] scaffold0141 (1 HSPs)
scaffold0141 (6-74)||(9693-9761)
[»] scaffold0459 (1 HSPs)
scaffold0459 (7-70)||(6634-6697)
[»] scaffold0366 (1 HSPs)
scaffold0366 (7-70)||(6632-6695)
[»] scaffold0147 (1 HSPs)
scaffold0147 (19-64)||(12641-12686)


Alignment Details
Target: chr8 (Bit Score: 348; Significance: 0; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 9700083 - 9700434
Alignment:
Q  1 cacaagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcccttactcaagcatgtgatgggaatta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9700083 cacaagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcccttactcaagcatgtgatgggaatta 9700182  T
Q  101 tatcattttttcacgccgcattgttatttttatatttttcaggcaactggaaacgtgcttatgcagctgttaagcattttgttgaatgcctgatttctaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9700183 tatcattttttcacgccgcattgttatttttatatttttcaggcaactggaaacgtgcttatgcagctgttaagcattttgttgaatgcctgatttctaa 9700282  T
Q  201 ttatgatcctaaaaagagacagatcaccaaaaggaatggtcttccaagtatcatattgtcagattatttagaaggccgtatgccaaaaagttcgcaagat 300  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9700283 ttatgatcctaaaaagagacagatcaccagaaggaatggtcttccaagtatcatattgtcagattatttagaaggccgtatgccaaaaagttcgcaagat 9700382  T
Q  301 aagggatttaattggagtggggatgttgcgtcaatcacttcattttcacagg 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9700383 aagggatttaattggagtggggatgttgcgtcaatcacttcattttcacagg 9700434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 16162851 - 16162916
Alignment:
Q  10 tctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  16162851 tctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaacaggccc 16162916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 14926970 - 14926895
Alignment:
Q  1 cacaagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||||||||||| ||||||||||||| |||||| |||| ||||| |||||||||| |||||||||| |||||    
T  14926970 cacaagctctctcaaacagtctcacaagtgcttatgccagtaaataagttcaaataagtcaatccaaacaagccct 14926895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 1664454 - 1664509
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    |||||||| |||| |||||||||||||||||||||||||||||| |||||||||||    
T  1664454 aagctctcccaaacagtctcacaagtgtttatgctagtagataaactcaaataagt 1664509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 1117402 - 1117464
Alignment:
Q  14 aaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||||| |||||||||| |||||    
T  1117402 aaatagtctcacaagtgtttatgctagtatataagttcaagtaagtcaatccaaacaagccct 1117464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 10075538 - 10075468
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    ||||||||| ||| |||||| ||||| ||||||| ||||||||| |||||||||||||||| |||||||||    
T  10075538 aagctctcttaaacagtctcgcaagtatttatgccagtagataaactcaaataagttaatcgaaacaggcc 10075468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 7918766 - 7918694
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 77  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| | |||||| | ||| |||||||||||||    
T  7918766 aagctctcccaaacagtctcacaagtgtttatgctagtagataagtttaaataa-tcaattcaaacaggccctt 7918694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 31862580 - 31862652
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcccttact 80  Q
    |||||||||| ||||| ||||||| | ||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  31862580 ctctctcaaacagtctaacaagtgataatgctagtaga-aagctcaaataagtcaattcaaacaggcccttact 31862652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 4763979 - 4764047
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    ||||||||| ||||||||||| | ||| |||||||||| |||||| |||||||||| ||||||||||||    
T  4763979 aagctctcttaaatagtctcataggtgcttatgctagtggataagttcaaataagtcaatccaaacagg 4764047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 44236794 - 44236739
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    ||||||||||||| |||||| ||||||||| |||||||||| ||||||||||||||    
T  44236794 agtctcacaagtgcttatgccagtagataaactcaaataaggtaatccaaacaggc 44236739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 31891924 - 31891970
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||    
T  31891924 ttatgctagtagataaactcaaataaattaatccaaacaggccctta 31891970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 43393757 - 43393687
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    |||||||| |||| ||||||| |||||||| ||| |||||||||||| |||||||| |||||||| |||||    
T  43393757 aagctctcccaaacagtctcaaaagtgtttttgcaagtagataagcttaaataagtcaatccaaataggcc 43393687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28769327 - 28769254
Alignment:
Q  1 cacaagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    |||||||||||||||||| ||||||||||| |||||| ||||||||  || |||||||  |||| |||||||||    
T  28769327 cacaagctctctcaaataatctcacaagtgcttatgccagtagatagcctaaaataagacaatcaaaacaggcc 28769254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 1561363 - 1561426
Alignment:
Q  5 agctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||||||||||| | |||||||||||||||||| | |||||||| |||||||| | ||||||||    
T  1561363 agctctctcaaacaatctcacaagtgtttatgccattagataagatcaaataaatcaatccaaa 1561426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 10062126 - 10062059
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||| |||||||| ||  ||||||| ||| |||||||||||||||||||||  |||||||||||    
T  10062126 aagctctcccaaatagtttcgtaagtgttgatgttagtagataagctcaaataagccaatccaaacag 10062059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 10437968 - 10438039
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||||| |||| |||||||||||| |||||| | | |||||| |||||||||| |||||||||| ||||    
T  10437968 aagctctctaaaattgtctcacaagtgattatgccattggataagttcaaataagtcaatccaaacatgccc 10438039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 24326116 - 24326167
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaat 55  Q
    |||||||| |||| ||||||||||||| |||||| |||||||||||||||||    
T  24326116 aagctctcccaaacagtctcacaagtgcttatgccagtagataagctcaaat 24326167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 77
Target Start/End: Original strand, 27493060 - 27493095
Alignment:
Q  42 agataagctcaaataagttaatccaaacaggccctt 77  Q
    ||||||||||||||||||||||||||||||||||||    
T  27493060 agataagctcaaataagttaatccaaacaggccctt 27493095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 31884909 - 31884854
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||||||| ||||||||||||||||||||||||||   ||||||| |||||||    
T  31884909 tctcacaagtgcttatgctagtagataagctcaaataacgcaatccaagcaggccc 31884854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 2091849 - 2091915
Alignment:
Q  5 agctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||||||| | |||||||||||||||||| | | |||||| |||||||| | |||||||||||    
T  2091849 agctctctcaaacaatctcacaagtgtttatgccattggataagatcaaataaatcaatccaaacag 2091915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 6526233 - 6526167
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    ||||||||| | ||||||||| | |||||| |||||||| |||| ||||||| ||||||||||||||    
T  6526233 tctctcaaacaatctcacaagggcttatgccagtagataggctcgaataagtcaatccaaacaggcc 6526167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 7008698 - 7008752
Alignment:
Q  19 gtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    |||||||||||| |||||| ||||||||| ||||||||||| ||| |||||||||    
T  7008698 gtctcacaagtgcttatgccagtagataaactcaaataagtcaattcaaacaggc 7008752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 7714336 - 7714398
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    |||| |||||||||||||||||||  | || |||||||||||||||| |||||||||| ||||    
T  7714336 caaacagtctcacaagtgtttatgacattatataagctcaaataagtcaatccaaacatgccc 7714398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 18331815 - 18331865
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||||| ||||| ||||||||||| |||||||||| ||||||||||    
T  18331815 tctcacaagtgcttatgttagtagataagatcaaataagtcaatccaaaca 18331865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 29592542 - 29592488
Alignment:
Q  15 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 69  Q
    ||||||||||||||||||| ||| | |||| |||||||||||||| |||||||||    
T  29592542 aatagtctcacaagtgtttgtgcaaatagacaagctcaaataagtcaatccaaac 29592488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 30191126 - 30191052
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||||| |||| ||||| ||||||| |||||| | ||||||| |||||||||| | || ||||||||||||||    
T  30191126 aagctctcccaaacagtctaacaagtgcttatgccaatagataaactcaaataagcttatgcaaacaggccctta 30191052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 34770957 - 34771019
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||| ||| ||||||||| ||||||||| |||||| ||||||||||| || |||||||    
T  34770957 tctctcaaacagtttcacaagtgcttatgctagcagataaactcaaataagtcaaaccaaaca 34771019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 43368671 - 43368617
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    |||||||||| || ||||| ||||||||||| |||||||||| ||||||||||||    
T  43368671 agtctcacaaatgcttatgttagtagataagatcaaataagtcaatccaaacagg 43368617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 6950407 - 6950468
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatcc 65  Q
    |||||||| |||| | |||||||| ||||||||| ||||||||| ||||||||||| |||||    
T  6950407 aagctctcccaaacaatctcacaaatgtttatgccagtagataaactcaaataagtcaatcc 6950468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 10488562 - 10488614
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||| ||||||||| |||| ||||||||||||||||  ||||||||||    
T  10488562 agtctcacatgtgtttatgttagttgataagctcaaataagccaatccaaaca 10488614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 20186438 - 20186378
Alignment:
Q  15 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||||||| ||||| ||||| | ||||||||||||||||||| ||| |||| ||||||    
T  20186438 aatagtctcaccagtgtctatgccactagataagctcaaataagtcaatgcaaataggccc 20186378  T

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Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 20205505 - 20205445
Alignment:
Q  15 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||||||| ||||| ||||| | ||||||||||||||||||| ||| |||| ||||||    
T  20205505 aatagtctcaccagtgtctatgccactagataagctcaaataagtcaatgcaaataggccc 20205445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 33553343 - 33553399
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||| ||||| |  |||||||||||||||||| ||||||||||| |||||||    
T  33553343 tcacaagtgcttatgttgatagataagctcaaataagctaatccaaacaagccctta 33553399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 38602447 - 38602483
Alignment:
Q  39 agtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||||||||||||||||| |||||||||||||||    
T  38602447 agtagataagctcaaataagtcaatccaaacaggccc 38602483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 43043770 - 43043822
Alignment:
Q  21 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    |||||||||| |||||| ||| |||||||||||| |||| |||||||||||||    
T  43043770 ctcacaagtgcttatgccagttgataagctcaaacaagtcaatccaaacaggc 43043822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 1889120 - 1889065
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    ||||| || |||| ||||||| |||||||||||| ||||||||| |||||||||||    
T  1889120 aagctttcccaaacagtctcaaaagtgtttatgccagtagataaactcaaataagt 1889065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 7648134 - 7648063
Alignment:
Q  5 agctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||| || || |||||||||| ||||||||| ||  ||||||||||||||||| || |||||| ||||||    
T  7648134 agctctatcgaacagtctcacaaatgtttatgccagcggataagctcaaataagtcaacccaaaccggccct 7648063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 16825497 - 16825454
Alignment:
Q  35 tgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||||||||||| ||||||||| || ||||||||||||||||    
T  16825497 tgctagtagataagttcaaataagctagtccaaacaggccctta 16825454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 30251404 - 30251365
Alignment:
Q  39 agtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  30251404 agtagataagctcaaataagccaatccaaacaggccctta 30251365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 37461261 - 37461300
Alignment:
Q  39 agtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  37461261 agtagataagttcaaataagttaatccaaacaggctctta 37461300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 39881709 - 39881646
Alignment:
Q  1 cacaagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatc 64  Q
    ||||||||||  |||| | |||||||||||||||||| | |||||||| |||||||||| ||||    
T  39881709 cacaagctcttccaaacaatctcacaagtgtttatgccaatagataagttcaaataagtcaatc 39881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 42215263 - 42215216
Alignment:
Q  26 aagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    ||||| |||||| |||| ||||||||||||||||||||| ||||||||    
T  42215263 aagtgcttatgccagtaaataagctcaaataagttaatctaaacaggc 42215216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 2487989 - 2487919
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||| |||| ||||||||||||| |||||  ||||||| | ||||||||||  |||||||||| |||||||    
T  2487989 tctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaataagccaatccaaacatgccctta 2487919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 2606138 - 2606208
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||| |||| ||| |||| |||| |||||  ||||||||||||| ||||||| |||||||||| |||||||    
T  2606138 tctcccaaacagtttcactagtgattatgtcagtagataagctcgaataagtcaatccaaacaagccctta 2606208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 7853461 - 7853523
Alignment:
Q  1 cacaagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaat 63  Q
    |||||| |||| ||||||||||||| |||| |||||| |||||| ||| | ||||||||||||    
T  7853461 cacaagttctcccaaatagtctcactagtgcttatgccagtagaaaaggtaaaataagttaat 7853523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 8629199 - 8629261
Alignment:
Q  5 agctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaa 67  Q
    |||||||||||  ||||||||||||| |||||| ||||| |||||| |||||||  |||||||    
T  8629199 agctctctcaagcagtctcacaagtgcttatgccagtaggtaagcttaaataagcaaatccaa 8629261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 9130276 - 9130238
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  9130276 ttatgccagtagataagctcaaataagctaatccaaaca 9130238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 25872394 - 25872340
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    |||||||||||| ||||||||| |||||| |||| | ||| ||||||||||||||    
T  25872394 tctcacaagtgtgtatgctagttgataagttcaagttagtcaatccaaacaggcc 25872340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 29592171 - 29592129
Alignment:
Q  15 aatagtctcacaagtgtttatgctagtagataagctcaaataa 57  Q
    ||||||||||| |||||||||||  ||||||||||||||||||    
T  29592171 aatagtctcacgagtgtttatgcctgtagataagctcaaataa 29592129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 38874817 - 38874862
Alignment:
Q  31 tttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||||||| |||||||||||||||| |||| ||||| |||||    
T  38874817 tttatgctagtaaataagctcaaataagtcaatctaaacatgccct 38874862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 43045682 - 43045641
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    ||||||||||||||||||| |||||||  |||||||||||||    
T  43045682 ttatgctagtagataagcttaaataagccaatccaaacaggc 43045641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 2213502 - 2213546
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataa 57  Q
    |||| ||| ||||||||||||||||||||||||||  ||||||||    
T  2213502 caaacagtatcacaagtgtttatgctagtagataatttcaaataa 2213546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 3092607 - 3092542
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    ||||||||||||||||||  ||||||||||  |  | || |||||||||||||||| |||||||||||    
T  3092607 aagctctctcaaatagtc--acaagtgtttgcgtcaataaataagctcaaataagtcaatccaaacag 3092542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 4049784 - 4049836
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaata 56  Q
    |||| ||||||| |||||||||||||| ||||| || ||||||||||| ||||    
T  4049784 aagcactctcaagtagtctcacaagtgcttatgatactagataagctcgaata 4049836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 4560604 - 4560652
Alignment:
Q  21 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 69  Q
    |||||||||| |||||  | ||||||||||||||||||| |||||||||    
T  4560604 ctcacaagtgcttatgtcaatagataagctcaaataagtcaatccaaac 4560652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 10923684 - 10923736
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    ||||||||||| |||| |||||||||||||| | || |||| |||||||||||    
T  10923684 ctctctcaaattgtcttacaagtgtttatgccactaaataaactcaaataagt 10923736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 11569442 - 11569374
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    ||||||||| ||| ||||||||||||| |||||| || ||||||||||  |||||  |||| |||||||    
T  11569442 aagctctcttaaacagtctcacaagtggttatgccagcagataagctctgataagccaatcaaaacagg 11569374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 26479870 - 26479938
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    |||||||| |||||||| ||||||||  || ||  | |||||||||| |||||||| ||||||||||||    
T  26479870 aagctctcgcaaatagtttcacaagtccttgtgtcaatagataagcttaaataagtcaatccaaacagg 26479938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 29699381 - 29699425
Alignment:
Q  29 tgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    ||||||||| || ||| |||||||||||||| |||||||||||||    
T  29699381 tgtttatgccagcagagaagctcaaataagtcaatccaaacaggc 29699425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 39049373 - 39049405
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctca 52  Q
    |||||||| ||||||||||||||||||||||||    
T  39049373 tctcacaaatgtttatgctagtagataagctca 39049405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 44401654 - 44401694
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaa 53  Q
    |||| |||||||||||||| ||||| |||||||||||||||    
T  44401654 caaacagtctcacaagtgtatatgccagtagataagctcaa 44401694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 9e-21; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 51929826 - 51929897
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    |||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  51929826 aagctcttccaaatagcctcacaagtgtttatgctaatagataagctcaaataagtcaatccaaacaggccc 51929897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 44014777 - 44014712
Alignment:
Q  10 tctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  44014777 tctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaacaggccc 44014712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 40240785 - 40240738
Alignment:
Q  25 caagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  40240785 caagtgtttatgctagtatataagctcaaataagttaatccaaacagg 40240738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 50211824 - 50211886
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||| ||||| ||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  50211824 tctctcaaacagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 50211886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 49845525 - 49845457
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    |||||||| |||||||| ||| |||| ||||| |||||| |||||||||||||||| ||||||||||||    
T  49845525 aagctctcccaaatagtttcataagtttttatactagtatataagctcaaataagtcaatccaaacagg 49845457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 2304252 - 2304202
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataag 58  Q
    ||||||||||||| |||||||||||||||||||||||| || |||||||||    
T  2304252 tctctcaaatagtttcacaagtgtttatgctagtagatcagttcaaataag 2304202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 44295616 - 44295678
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||||||| |||| |||| |||||    
T  44295616 tctctcaaatagtatcacaagtgcttatgcttgtagataagctcaaacaagtcaatctaaaca 44295678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 45590736 - 45590802
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||| ||||| |||| ||| ||||||    
T  45590736 aagctctcccaaacagtctcacaagtgcttatgctagtagataagttcaaaaaagtcaattcaaaca 45590802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 21872271 - 21872214
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||| ||||||||||||| |||||  |||||||||| |||||||||||||||||||||    
T  21872271 caaacagtctcacaagtgcttatgtcagtagataagatcaaataagttaatccaaaca 21872214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 32663726 - 32663795
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||||||||||||||||||||| | ||   |||||||||||||||||||  ||||||||||| ||||    
T  32663726 ctctctcaaatagtctcacaagtgtatttgtcggtagataagctcaaataagccaatccaaacagaccct 32663795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 2100164 - 2100092
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||| |||| ||||||||||||||||  |||   |||||||||||||||||| ||||||||||| ||||    
T  2100164 aagctctcacaaacagtctcacaagtgttttagctgaaagataagctcaaataagtcaatccaaacagaccct 2100092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 25459599 - 25459543
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||||||| |||||||||| ||||||||||||||| | ||||||||||| ||||    
T  25459599 tctcacaagtgcttatgctagttgataagctcaaataaatcaatccaaacagaccct 25459543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 27795998 - 27795938
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatc 64  Q
    ||||||||| ||| ||| ||||||||| |||||| |||||||||||||||||||| |||||    
T  27795998 aagctctcttaaacagtttcacaagtgcttatgccagtagataagctcaaataagctaatc 27795938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34958375 - 34958451
Alignment:
Q  1 cacaagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 77  Q
    |||||| |||| |||||||| ||||||||||||| |  | ||||| | |||||| ||||||||||||||||||||||    
T  34958375 cacaagttctcccaaatagtgtcacaagtgtttaggtcaatagatcatctcaaacaagttaatccaaacaggccctt 34958451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 11041423 - 11041376
Alignment:
Q  25 caagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    |||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  11041423 caagtgtttatgctagcagataagctcaattaagtcaatccaaacagg 11041376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 22667491 - 22667542
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataag 58  Q
    |||||||||| ||||||||||||| |||||  ||||||||||||||||||||    
T  22667491 ctctctcaaacagtctcacaagtgcttatgtcagtagataagctcaaataag 22667542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 22724130 - 22724181
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataag 58  Q
    |||||||||| ||||||||||||| |||||  ||||||||||||||||||||    
T  22724130 ctctctcaaacagtctcacaagtgcttatgtcagtagataagctcaaataag 22724181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 2413664 - 2413598
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||||||| || || ||||||| |||||||| ||||| || |||||||||| ||||||||||    
T  2413664 aagctctctcaaacagacttacaagtgattatgctaatagatgagttcaaataagtaaatccaaaca 2413598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 11253595 - 11253653
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||| |||||| |||||| |||||||||||||||| ||||||||||| ||| |||||||    
T  11253595 caaacagtctctcaagtgcttatgctagtagataatctcaaataagtcaattcaaacag 11253653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 20210909 - 20210847
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||| ||||||||||||| |||||  ||||||||| ||||||||| | ||||||||||    
T  20210909 tctctcaaacagtctcacaagtggttatgtcagtagataacctcaaataaatcaatccaaaca 20210847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 24684779 - 24684741
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  24684779 ttatgccagtagataagctcaaataagttaatccaaaca 24684741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 584159 - 584196
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaac 69  Q
    |||||||||||||||||||||||||||| |||||||||    
T  584159 ttatgctagtagataagctcaaataagtcaatccaaac 584196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 36189723 - 36189780
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||| ||||||||||||| |||| |||||| |||||||||||||||| ||| ||||||    
T  36189723 caaacagtctcacaagtgcttatactagtaaataagctcaaataagtcaattcaaaca 36189780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 48807784 - 48807837
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataa 57  Q
    ||||||| | ||| ||||||||||||||||||||||||| ||||||| ||||||    
T  48807784 aagctctgtgaaagagtctcacaagtgtttatgctagtaaataagcttaaataa 48807837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 1810062 - 1810102
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtaga 44  Q
    ||||||||||||||||||||||||||| ||||| |||||||    
T  1810062 aagctctctcaaatagtctcacaagtgattatgttagtaga 1810102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 31512486 - 31512534
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||||| |||||||||| |||||||||| |||| ||||||||||    
T  31512486 tcacaagtgttcatgctagtaggtaagctcaaacaagtcaatccaaaca 31512534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 41057244 - 41057312
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||| |||| ||||||||||||| ||||||  |||||||||||||||||||  ||| |||| |||||||    
T  41057244 tctcccaaacagtctcacaagtgcttatgcatgtagataagctcaaataagccaattcaaataggccct 41057312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 41644409 - 41644369
Alignment:
Q  25 caagtgtttatgctagtagataagctcaaataagttaatcc 65  Q
    |||||| ||||||||||||||||||||||| ||||||||||    
T  41644409 caagtgcttatgctagtagataagctcaaagaagttaatcc 41644369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 45541670 - 45541730
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||| |||||||||||| | | || |||||||||||||||| ||||||||||||| ||||    
T  45541670 agtcttacaagtgtttataccattaaataagctcaaataagtcaatccaaacaggctctta 45541730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 49605833 - 49605769
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||||| | ||||||||||  ||||||||| |||||| |||||||||  ||||||||||||    
T  49605833 ctctctcaaacactctcacaagtacttatgctagaagataaactcaaataaactaatccaaacag 49605769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 53891862 - 53891806
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||||||||||||||||||||||| | |||||  ||||| || |||||||||    
T  53891862 tcacaagtgtttatgctagtagataagctgatataagccaatccgaataggccctta 53891806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 3622364 - 3622415
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    ||||||||| |||| |||||||||||||| ||||||||  ||||||||||||    
T  3622364 tcacaagtgcttatactagtagataagcttaaataagtcgatccaaacaggc 3622415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 11041211 - 11041160
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaat 55  Q
    ||||||||||||| |||| |||||||| ||||  ||||||||||||||||||    
T  11041211 aagctctctcaaacagtcccacaagtgcttatcttagtagataagctcaaat 11041160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 22055651 - 22055705
Alignment:
Q  15 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||| ||||||||| | ||| |||||||||||||||||||| |||||||||||    
T  22055651 aatagtcccacaagtgtgtgtgccagtagataagctcaaataag-taatccaaaca 22055705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 57
Target Start/End: Complemental strand, 23326154 - 23326123
Alignment:
Q  26 aagtgtttatgctagtagataagctcaaataa 57  Q
    ||||||||||||||||||||||||||||||||    
T  23326154 aagtgtttatgctagtagataagctcaaataa 23326123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 37138375 - 37138434
Alignment:
Q  12 tcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||||||||||||||||||||  |||||||||  || ||||||  |||||||||||    
T  37138375 tcaaatagtctcacaagtgtttatgtcagtagataaattctaataagccaatccaaacag 37138434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 50015975 - 50016042
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||||| |||||||||||||||||||| | ||||||| || | |||||  |||||||| ||||||    
T  50015975 tctctcaaacagtctcacaagtgtttatgccaatagataaactgagataagccaatccaaagaggccc 50016042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 1288831 - 1288768
Alignment:
Q  5 agctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||| |||| ||||||||  ||| |||||| ||| ||||||||||||||||| ||||||||||    
T  1288831 agctctcccaaacagtctcac--gtgcttatgccagttgataagctcaaataagtcaatccaaaca 1288768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 5407402 - 5407365
Alignment:
Q  41 tagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  5407402 tagataagctcaaataagctaatgcaaacaggccctta 5407365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 12985348 - 12985295
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataa 57  Q
    ||||||||||||| ||||||  ||||| |||||| ||| |||||||||||||||    
T  12985348 aagctctctcaaacagtctcgaaagtgcttatgcaagtggataagctcaaataa 12985295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 25182972 - 25182908
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    ||||||||||||| ||||||||||||  ||||   ||||| ||||||||||||||| | |||||||||    
T  25182972 aagctctctcaaacagtctcacaagttcttat---agtaggtaagctcaaataagtcactccaaacag 25182908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 30750085 - 30750126
Alignment:
Q  6 gctctctcaaatagtctcacaagtgtttatgctagtagataa 47  Q
    ||||||||||||||||||||  || |||||||||||||||||    
T  30750085 gctctctcaaatagtctcacgcgtctttatgctagtagataa 30750126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 39769640 - 39769681
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataagttaat 63  Q
    |||| ||||||||||| |||||||||| ||||||||||||||    
T  39769640 tcacgagtgtttatgcgagtagataagttcaaataagttaat 39769681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 42809378 - 42809443
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 69  Q
    ||||||| | |||| |||||||||||| | |||||||||||| || |||||||||  |||||||||    
T  42809378 aagctcttttaaattgtctcacaagtgctaatgctagtagattagttcaaataagacaatccaaac 42809443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 49465906 - 49465869
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataa 57  Q
    |||||||||||||||||||| | |||||||||||||||    
T  49465906 tctcacaagtgtttatgctaatggataagctcaaataa 49465869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 49916564 - 49916613
Alignment:
Q  21 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||||||  |||||||||||||| |||||||| | ||||||||||    
T  49916564 ctcacaagtgttcgtgctagtagataagttcaaataaatcaatccaaaca 49916613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 53762352 - 53762307
Alignment:
Q  31 tttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||||||||||||||||||||||   ||||||| ||||||||    
T  53762352 tttatgctagtagataagctcaaataaaccaatccaagcaggccct 53762307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 1820079 - 1820043
Alignment:
Q  42 agataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||||||||||||||  ||||||||||||||||||    
T  1820079 agataagctcaaataagccaatccaaacaggccctta 1820043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 15304316 - 15304280
Alignment:
Q  41 tagataagctcaaataagttaatccaaacaggccctt 77  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  15304316 tagataagctcaaataagtcaattcaaacaggccctt 15304280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 24625327 - 24625267
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatc 64  Q
    ||||||||||||  || || ||||||| |||||| |||| ||||||||||| |||||||||    
T  24625327 aagctctctcaatcagccttacaagtgcttatgccagtaaataagctcaaacaagttaatc 24625267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 26320073 - 26320009
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 77  Q
    |||| ||| ||||||||||||||   |||| | ||| |||||||||| |||||||||||||||||    
T  26320073 caaaaagtttcacaagtgtttatttcagtataaaagatcaaataagtcaatccaaacaggccctt 26320009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 39980842 - 39980886
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||||||||||||||||||| |||  ||||||||||| ||||    
T  39980842 ttatgctagtagataagctcaaacaagccaatccaaacagaccct 39980886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 41848681 - 41848641
Alignment:
Q  24 acaagtgtttatgctagtagataagctcaaataagttaatc 64  Q
    ||||||||||||| |||||||||| ||||||||||| ||||    
T  41848681 acaagtgtttatgttagtagataaactcaaataagtcaatc 41848641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 47584535 - 47584567
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatg 36  Q
    ||||||||||||||||||||||||||| |||||    
T  47584535 aagctctctcaaatagtctcacaagtgcttatg 47584567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 50760694 - 50760742
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||| ||||||| |||||| ||||||||||||| |||| |||||    
T  50760694 tcacaagtgcttatgcttgtagatgagctcaaataagtcaatctaaaca 50760742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 52440628 - 52440584
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataagttaatcca 66  Q
    ||||||||| ||||||||||||||| | ||||||||||| |||||    
T  52440628 tcacaagtgcttatgctagtagataggttcaaataagtttatcca 52440584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 2460136 - 2460067
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    ||||||||||||| ||||||||||||  ||||||||||  ||||||||||||||||||||||||||||||    
T  2460136 aagctctctcaaacagtctcacaagtacttatgctagtttataagctcaaataagttaatccaaacaggc 2460067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 4325290 - 4325218
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||| || |||||||||||||||||||||||| |||||||||| || |||| ||| ||||||||||||||||    
T  4325290 aagctgtcacaaatagtctcacaagtgtttatgttagtagataaactaaaattagtcaatccaaacaggccct 4325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 12111066 - 12111129
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcccttactc 81  Q
    |||||| |||||| |||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  12111066 agtctcgcaagtgcttatgctagtagataagctcaaataagtcaatccaaataggcccatactc 12111129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 10016709 - 10016775
Alignment:
Q  5 agctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||||||||||   |||||||||||    
T  10016709 agctctctgaaatagtctcacaagtgtttatgcctgtagataagctcaaataaaccaatccaaacag 10016775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 6742907 - 6742951
Alignment:
Q  15 aatagtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    |||||||||||||||| |||||||||||| |||||||||||||||    
T  6742907 aatagtctcacaagtgattatgctagtaggtaagctcaaataagt 6742951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 3217097 - 3217042
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    ||||||| ||||||||| || ||| ||||||||| |||||||||||||||||||||    
T  3217097 aagctctatcaaatagtttcgcaaatgtttatgcaagtagataagctcaaataagt 3217042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 3738200 - 3738247
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatcc 65  Q
    ||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  3738200 agtctcacaagtgcttatgctagtagataaactcaaataagtcaatcc 3738247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 32917282 - 32917337
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    |||||||| |||| |||||||||||||||||| ||||||| ||||||| |||||||    
T  32917282 aagctctcccaaacagtctcacaagtgtttattctagtaggtaagctctaataagt 32917337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 32205970 - 32205928
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  32205970 ttatgctagtagataaggtcaaataagtcaatccaaacaggcc 32205928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 35070448 - 35070386
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||| |||| |||| |||||||| ||||| |||||||||||||||||||||  ||||||||||    
T  35070448 tctcccaaacagtcccacaagtgcttatgttagtagataagctcaaataagaaaatccaaaca 35070386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 8010457 - 8010514
Alignment:
Q  19 gtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||||| ||||||||| | |||||||||||| |||||| ||||||||||| ||||    
T  8010457 gtctcacaaatgtttatgccaatagataagctcacataagtcaatccaaacagaccct 8010514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 34531507 - 34531552
Alignment:
Q  26 aagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||||    
T  34531507 aagtgtttatgctaggagataagctcaaatcagtcaatccaaacag 34531552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 316794 - 316750
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctca 52  Q
    |||||| ||| || |||||||||||||||||||||||||||||||    
T  316794 tctctcgaatcgtgtcacaagtgtttatgctagtagataagctca 316750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 21959792 - 21959855
Alignment:
Q  10 tctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    ||||||| ||||||| ||||| ||| || |||| ||||| |||||||||||||||||||||||||    
T  21959792 tctcaaacagtctcagaagtgctta-gcaagtatataagttcaaataagttaatccaaacaggcc 21959855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 34403954 - 34404006
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||| ||||||||||||||||||  || |||| |||||||||||||||||||    
T  34403954 agtctaacaagtgtttatgctagtttattagctgaaataagttaatccaaaca 34404006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 34429678 - 34429646
Alignment:
Q  25 caagtgtttatgctagtagataagctcaaataa 57  Q
    |||||||||||||||||||||||||||||||||    
T  34429678 caagtgtttatgctagtagataagctcaaataa 34429646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 835218 - 835179
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  835218 ttatgctagtagataagctcaaataaggcaatccaaacag 835179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 8420182 - 8420115
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaat-aagttaatccaaaca 70  Q
    |||||||| | || |||||||||||||||||||  | ||||||||||||||| |||| ||||||||||    
T  8420182 aagctctcactaacagtctcacaagtgtttatgtcaatagataagctcaaataaagtcaatccaaaca 8420115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 19752791 - 19752724
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    ||||||||||||||||||||||||||| |||    | ||||||||  |||||| ||||||||||||||    
T  19752791 aagctctctcaaatagtctcacaagtgcttaaataactagataagagcaaataggttaatccaaacag 19752724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 26559215 - 26559160
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||| |||||||||| || |||||| ||||| ||| ||||||||||||||||||||    
T  26559215 caaacagtctcacaaatgcttatgccagtaggtaaactcaaataagttaatccaaa 26559160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 30863331 - 30863402
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    |||||||  |||| ||||| |||||||||||||| | || ||| |||||||||||| | |||||||||||||    
T  30863331 aagctctaccaaagagtctaacaagtgtttatgccaataaataggctcaaataagtcactccaaacaggccc 30863402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 31327582 - 31327527
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||||||| ||||||||||||| ||||||| ||||||| |||||||| ||| ||||    
T  31327582 caaatagtttcacaagtgtttaggctagtaaataagcttaaataagtcaattcaaa 31327527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 32861645 - 32861696
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    ||||||||| |||| ||||||||||||||||||||||  |||||||| ||||    
T  32861645 tcacaagtgcttattctagtagataagctcaaataagcaaatccaaaaaggc 32861696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 2727859 - 2727801
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||| ||| |||||||||||||||| | |||||||||||||| |||  |||||||||||    
T  2727859 caaacagtgtcacaagtgtttatgcgattagataagctcaaacaagccaatccaaacag 2727801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 3181053 - 3180999
Alignment:
Q  5 agctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    |||||| ||||||||||||||||||| |||||   ||||||||| ||||||||||    
T  3181053 agctctttcaaatagtctcacaagtgcttatgtctgtagataagttcaaataagt 3180999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 7148767 - 7148817
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||||| |||||| | ||||||||||||||||||| || |||||||    
T  7148767 tctcacaagtgcttatgcgactagataagctcaaataagtcaaaccaaaca 7148817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 7485122 - 7485051
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 77  Q
    ||||||||||||| || ||||  ||||||||| | ||||||||||| |||| ||||  ||||||||||||||||    
T  7485122 aagctctctcaaacagcctca--agtgtttataccagtagataagcacaaacaagtatatccaaacaggccctt 7485051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 7901816 - 7901750
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||  |||| ||||||||||| | ||||| || || |||| ||||||||||||||||||||||    
T  7901816 aagctcttccaaacagtctcacaagggcttatgatactatataaactcaaataagttaatccaaaca 7901750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 9202941 - 9202903
Alignment:
Q  33 tatgctagtagataagctcaaataagttaatccaaacag 71  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  9202941 tatgccagtagataagctcaaataagtcaatccaaacag 9202903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 31668442 - 31668480
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagta 42  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  31668442 aagctctctctaatagtctcacaagtgtttatgcaagta 31668480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 33737831 - 33737881
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||| |||||||||||| |||||||||| ||||||||||| ||||| ||||    
T  33737831 tctctcaagtgtttatggtagtagataaactcaaataagtcaatcctaaca 33737881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 103543 - 103584
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    |||||||| || |||||||||||||||| |||||||||||||    
T  103543 ttatgctaatatataagctcaaataagtcaatccaaacaggc 103584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 738510 - 738461
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 69  Q
    |||||||| |||||||   | |||||||||||||||||||||||||||||    
T  738510 tctcacaaatgtttatctcaatagataagctcaaataagttaatccaaac 738461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 2795346 - 2795415
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    ||||||||  ||| |||||||||||| ||||||  ||||||||||  |||||| ||||||| ||||||||    
T  2795346 aagctctcctaaacagtctcacaagtatttatgtcagtagataagtacaaataggttaatcaaaacaggc 2795415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 28005538 - 28005473
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    |||||| ||| ||||| ||||||| |||||| ||||| ||||||||||| || ||||| |||||||    
T  28005538 ctctcttaaacagtcttacaagtgcttatgccagtaggtaagctcaaatgagctaatctaaacagg 28005473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 31338090 - 31338123
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatcc 65  Q
    |||||||||||||||||||||||||||| |||||    
T  31338090 ttatgctagtagataagctcaaataagtcaatcc 31338123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 848102 - 848145
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||    
T  848102 ttatgcta-tagataagctcaaataaggcaatccaaacaggccct 848145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 9109061 - 9109025
Alignment:
Q  42 agataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  9109061 agataaactcaagtaagttaatccaaacaggccctta 9109025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10353749 - 10353705
Alignment:
Q  1 cacaagctctctcaaatagtctcacaagtgtttatgctagtagat 45  Q
    ||||||||||| |||| ||||||||||||| ||||| ||||||||    
T  10353749 cacaagctctcccaaacagtctcacaagtgcttatgttagtagat 10353705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 13908343 - 13908391
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||||||||||  |||||||||| |||||||||| ||| ||||||    
T  13908343 tcacaagtgtttatgtcagtagataagttcaaataagtcaattcaaaca 13908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 27897173 - 27897229
Alignment:
Q  1 cacaagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataa 57  Q
    |||||||| || | |||||||||| ||| |||||||| | |||||||||||||||||    
T  27897173 cacaagctttccctaatagtctcataagcgtttatgccactagataagctcaaataa 27897229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 29052890 - 29052850
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataag 58  Q
    ||||||||||||| |||||||||||||| || |||||||||    
T  29052890 agtctcacaagtgcttatgctagtagattagttcaaataag 29052850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 30536915 - 30536879
Alignment:
Q  39 agtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  30536915 agtagataaactcaaataagtcaatccaaacaggccc 30536879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 31776239 - 31776191
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||||| |||   ||||||||||||||||||||| ||||||||||    
T  31776239 tcacaagtgtatatatcagtagataagctcaaataagtcaatccaaaca 31776191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 33500465 - 33500421
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataag 48  Q
    |||||| |||||| |||||||| ||||| ||||||||||||||||    
T  33500465 aagctccctcaaacagtctcacgagtgtgtatgctagtagataag 33500421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 27123337 - 27123268
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    ||||||||||||| ||||||||||||  ||||||||||  ||||||||||||||||||||||||||||||    
T  27123337 aagctctctcaaacagtctcacaagtacttatgctagtttataagctcaaataagttaatccaaacaggc 27123268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 18512500 - 18512433
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    ||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  18512500 aagctctttcaactagtctcacaagtgtttatgtcagtagataagctcaaataagttaatcgaaacag 18512433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 56186877 - 56186817
Alignment:
Q  10 tctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||| |||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  56186877 tctcgaatagtctcacaagtgtttatgttagtagataaactcgaataagttaatccaaaca 56186817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 7368038 - 7367967
Alignment:
Q  5 agctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||| |||| ||||||||||| ||||||||  |||||||| ||||||||||| ||||||||||| ||||    
T  7368038 agctctcccaaacagtctcacaagcgtttatgcctgtagataaactcaaataagtcaatccaaacagaccct 7367967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 21953375 - 21953430
Alignment:
Q  21 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||||||||| ||||    
T  21953375 ctcacaagtgattatgctactagataagctcaaataagtcaatccaaacagaccct 21953430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 28615435 - 28615486
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||||||||||||||||||||||| || |||||||| |||||||||||    
T  28615435 tctcacaagtgtttatgctagtagataaacttaaataagtcaatccaaacag 28615486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 47399567 - 47399642
Alignment:
Q  1 cacaagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||| ||||||||  |||||||||||| ||||||| |||| ||||| |||||||||||||| ||||||| ||||    
T  47399567 cacaagttctctcaatcagtctcacaagtttttatgccagtatataagttcaaataagttaattcaaacagaccct 47399642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 32421029 - 32420979
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  32421029 agtctcacaagtgcttatgctagtaggtaagctcaaataagtcaatccaaa 32420979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 55870327 - 55870261
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||| ||||||| |||||||||| ||||||||  | ||||||| ||||||||||||||||||||||    
T  55870327 aagctatctcaaagagtctcacaaatgtttatgtcattagataaactcaaataagttaatccaaaca 55870261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 2977961 - 2977896
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 69  Q
    ||||||||| ||| ||||||||| ||| |||||| | ||||| |||||||||||||||||||||||    
T  2977961 aagctctcttaaacagtctcacacgtgcttatgccactagatcagctcaaataagttaatccaaac 2977896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 24193634 - 24193683
Alignment:
Q  21 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||||||||||| || |||||||||||||||||| ||||||||||    
T  24193634 ctcacaagtgtttatgccaggagataagctcaaataagtcaatccaaaca 24193683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 46187889 - 46187828
Alignment:
Q  9 ctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||| ||| ||||||| |||||||||||| |||||||||||||||||||| | |||||||||    
T  46187889 ctcttaaacagtctcataagtgtttatgccagtagataagctcaaataagatcatccaaaca 46187828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 18628538 - 18628486
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaata 56  Q
    |||||||| |||| |||||||||||||||||||  ||||||||||||||||||    
T  18628538 aagctctcccaaacagtctcacaagtgtttatgtcagtagataagctcaaata 18628486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 19429455 - 19429391
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||||||| |||| |||||||||||||||||| | |||| |||||||||||||||  ||||||||    
T  19429455 aagctctcccaaacagtctcacaagtgtttataccagtaaataagctcaaataagccaatccaaa 19429391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 25896869 - 25896933
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    ||||||||  ||| ||||||||||||| | |||||||||||||| ||||||||||| ||||||||    
T  25896869 aagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaaataagtgaatccaaa 25896933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 17822815 - 17822780
Alignment:
Q  39 agtagataagctcaaataagttaatccaaacaggcc 74  Q
    ||||||||||||||||||||||||||||||||||||    
T  17822815 agtagataagctcaaataagttaatccaaacaggcc 17822780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 17975322 - 17975255
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||  |||||||| | |||||||||| || | |||||||||||||||||||| |||||||||||    
T  17975322 aagctcttccaaatagtttgacaagtgtttgtgttggtagataagctcaaataagtcaatccaaacag 17975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 50746069 - 50746124
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||| ||| ||||    
T  50746069 caaatagtctcacaagtgcttatgcaagtagataaactcaaataagtcaatacaaa 50746124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 1017122 - 1017176
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaa 67  Q
    |||| |||||||||||||||||||  ||||||| ||||||||||||| |||||||    
T  1017122 caaacagtctcacaagtgtttatgtcagtagattagctcaaataagtcaatccaa 1017176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 3637341 - 3637299
Alignment:
Q  26 aagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  3637341 aagtgtttatgctaatagataagctcaaataagtcaatccaaa 3637299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 18815136 - 18815182
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||    
T  18815136 ttatgctagtaggtaagctcaaataagccaatccaaacaggccctta 18815182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 32421189 - 32421251
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||| |||||||||||||  ||||||||||  ||| |||||||||||| ||||||||||    
T  32421189 tctctcaagtagtctcacaagtccttatgctagtgaatatgctcaaataagtcaatccaaaca 32421251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 39691106 - 39691064
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    |||||||||||||||||||||||||||| ||| ||||||||||    
T  39691106 ttatgctagtagataagctcaaataagtcaattcaaacaggcc 39691064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 11264388 - 11264453
Alignment:
Q  6 gctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||| |||| |||||||||  ||||||||||||||||||  ||||||||||  |||||||||||    
T  11264388 gctctcccaaacagtctcacagatgtttatgctagtagatagactcaaataagccaatccaaacag 11264453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 23319965 - 23320010
Alignment:
Q  33 tatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||    
T  23319965 tatgctagtagataatctcaaataagccaatccaaacaggccctta 23320010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 1075561 - 1075597
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataag 58  Q
    |||||||||||||||| ||||||||||||||||||||    
T  1075561 tcacaagtgtttatgccagtagataagctcaaataag 1075597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 22662213 - 22662165
Alignment:
Q  27 agtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    |||| ||||| |||||||||| ||||||||||| |||||||||||||||    
T  22662213 agtgcttatgttagtagataaactcaaataagtcaatccaaacaggccc 22662165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 22666692 - 22666644
Alignment:
Q  27 agtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    |||| ||||| |||||||||| ||||||||||| |||||||||||||||    
T  22666692 agtgcttatgttagtagataaactcaaataagtcaatccaaacaggccc 22666644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 35571588 - 35571544
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||||||||||||||||||||||  ||||||||||| ||||    
T  35571588 ttatgctagtagataagctcaaataagccaatccaaacagaccct 35571544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 47146033 - 47146101
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||| ||| |||||||||||||| |||||| | || ||||| |||||||||| |||||||| |||||||    
T  47146033 tctcccaagtagtctcacaagtgcttatgccaatatataagttcaaataagtcaatccaaataggccct 47146101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 53315411 - 53315483
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||| |||||||||| | | ||| |||| | ||| ||||||||||||||||| ||||||||||| ||||    
T  53315411 aagctctcacaaatagtcttatatgtgcttataccagtggataagctcaaataagtcaatccaaacagaccct 53315483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 56007765 - 56007833
Alignment:
Q  5 agctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    |||||||||||| ||||| ||||||| |||||| |||||||||| ||||| | | |||| |||||||||    
T  56007765 agctctctcaaacagtcttacaagtgattatgccagtagataagttcaaacatgataattcaaacaggc 56007833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 2811559 - 2811622
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||||| ||||||| || || |||||| ||||||||| ||||||||||| ||| ||||||    
T  2811559 ctctctcaaacagtctcataaatgcttatgccagtagataacctcaaataagtcaattcaaaca 2811622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 4691939 - 4691986
Alignment:
Q  10 tctcaaatagtctcacaagtgtttatgctagtagataagctcaaataa 57  Q
    ||||||||||||||||||||| || ||  |||||||||||||||||||    
T  4691939 tctcaaatagtctcacaagtgattgtgacagtagataagctcaaataa 4691986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 10365860 - 10365923
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaa 67  Q
    ||||| |||||||||||||| | ||||||||||  |||||||||| | |||||||| |||||||    
T  10365860 aagctgtctcaaatagtctctccagtgtttatgtcagtagataagattaaataagtcaatccaa 10365923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 27043780 - 27043741
Alignment:
Q  39 agtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  27043780 agtagataagctcaaataagtcaatccaaacagaccctta 27043741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 33534154 - 33534099
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    ||||||||||||||| ||||||||||  |||||  | |||||||||||||||||||    
T  33534154 aagctctctcaaatactctcacaagtacttatgtcactagataagctcaaataagt 33534099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 78
Target Start/End: Complemental strand, 42403969 - 42403934
Alignment:
Q  43 gataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||||||||||| ||||||||||||||||||    
T  42403969 gataagctcaaataagtcaatccaaacaggccctta 42403934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 46860003 - 46860066
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaa 67  Q
    ||||||||||||| ||| ||||||||| |||||  | |||||||| |||||||||| |||||||    
T  46860003 aagctctctcaaacagtttcacaagtgcttatgtgaatagataagttcaaataagtcaatccaa 46860066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 9316610 - 9316676
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||| |||| ||| |||||||||||||||  | | ||| ||||||||||||| ||||||||||    
T  9316610 aagctctcccaaacagtttcacaagtgtttatgtaaatggatgagctcaaataagtcaatccaaaca 9316676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 37575917 - 37575855
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||| | | |||| || ||||||||||| |||||| ||||||||||| ||||||||||    
T  37575917 tctctcaaacaatgtcacgagagtttatgctagcagataaactcaaataagtcaatccaaaca 37575855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 52333693 - 52333755
Alignment:
Q  14 aaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||||||||||||| ||| |  |||| |||||||||||||||  |||| |||||||||||    
T  52333693 aaatagtctcacaagtgcttaggtcagtaaataagctcaaataagccaatcgaaacaggccct 52333755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 29126239 - 29126174
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||||| ||  ||||| ||||||  |||||||||||||||||||  |||||||||| |||||||    
T  29126239 caaatagtttcgtaagtgcttatgccggtagataagctcaaataagccaatccaaacaagccctta 29126174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 30338586 - 30338545
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    |||||||||||||||||| | |||||||||||||||| ||||    
T  30338586 agtctcacaagtgtttatcccagtagataagctcaaaaaagt 30338545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 78
Target Start/End: Original strand, 41512769 - 41512798
Alignment:
Q  49 ctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||||||||||||||||||||||||    
T  41512769 ctcaaataagttaatccaaacaggccctta 41512798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 43371969 - 43371905
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 69  Q
    ||||||| |||||||||||||||||||  | | |||||||||| | |||||||||| |||||||||    
T  43371969 aagctctttcaaatagtctcacaagtgaat-tactagtagatatgttcaaataagtgaatccaaac 43371905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 44320034 - 44320087
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataa 57  Q
    |||||||| |||| |||||||||| ||||||||| | ||| |||||||||||||    
T  44320034 aagctctcccaaacagtctcacaattgtttatgccaataggtaagctcaaataa 44320087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 54426156 - 54426197
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    |||||| ||||||||||||||||||||  |||||||||||||    
T  54426156 ttatgccagtagataagctcaaataagccaatccaaacaggc 54426197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 21469904 - 21469848
Alignment:
Q  8 tctctcaaatagtctcacaa-gtgtttatgctagtagataagctcaaataagttaat 63  Q
    ||||||||||||| | |||| ||||||||| | ||||||||||||||||||| ||||    
T  21469904 tctctcaaatagtgttacaaagtgtttatgtttgtagataagctcaaataagctaat 21469848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 22772445 - 22772389
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||| ||||||||||||||||||||||    |||| ||| ||||||||||||||||    
T  22772445 tctcaaaagtgtttatgctagtagataaaactaaatgagtcaatccaaacaggccct 22772389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 22796754 - 22796806
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||| || || |||||||||||||||| ||||||||| | ||||||||||    
T  22796754 agtctcataaatgcttatgctagtagataaactcaaataaatcaatccaaaca 22796806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 25487522 - 25487482
Alignment:
Q  24 acaagtgtttatgctagtagataagctcaaataagttaatc 64  Q
    ||||||| |||||||| ||||||| ||||||||||||||||    
T  25487522 acaagtgcttatgctaatagataaactcaaataagttaatc 25487482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 32769500 - 32769536
Alignment:
Q  40 gtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  32769500 gtagataagctaaaataagtcaatccaaacaggccct 32769536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 36462102 - 36462174
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||||||||  |||||||||| || |||| | | || ||||  ||||||||||||||||||| |||||||    
T  36462102 aagctctctcaatcagtctcacaattgcttataccaatatataaattcaaataagttaatccaaataggccct 36462174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 44638182 - 44638138
Alignment:
Q  33 tatgctagtagataagctcaaataagttaatccaaacaggccctt 77  Q
    |||||||||| |||| ||||||||||| |||||||||| ||||||    
T  44638182 tatgctagtaaataaactcaaataagtcaatccaaacatgccctt 44638138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 53943691 - 53943762
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||||| |||||||| ||| ||||| ||||   |||||||||| |||||||| | |||||| |||||||||||    
T  53943691 aagctctcccaaatagtttcataagtgcttat---agtagataagttcaaataattcaatccatacaggccctta 53943762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 54277308 - 54277236
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||| | || ||||||| |||||||||||  | |||||||| |||||||||| |||| |||||| ||||    
T  54277308 aagctctcgctaacagtctcataagtgtttatgtcactagataagttcaaataagtcaatctaaacagaccct 54277236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 55414370 - 55414326
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||| ||||||||  ||||||||||| ||||||||||||||||    
T  55414370 ttatgccagtagatactctcaaataagtcaatccaaacaggccct 55414326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 9e-18; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 529451 - 529521
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| ||| ||||||    
T  529451 tctcccaaatagcctcacaagtgtttatgccagtagataagctcaaataagtcaatccaatcagaccctta 529521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 8094395 - 8094445
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataag 58  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8094395 tctctcaaatagtctcacaagtgcttatgctagtagataagctcaaataag 8094445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 23214944 - 23215006
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||    
T  23214944 tctctcaaacagtctcataagtgtttatgctagtagataaggtcaaataagtcaatccaaaca 23215006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 17988997 - 17988945
Alignment:
Q  25 caagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 77  Q
    |||||| |||||| |||||||||||||||||||||||||||||||| ||||||    
T  17988997 caagtgattatgcgagtagataagctcaaataagttaatccaaacaagccctt 17988945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 40598456 - 40598404
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||| |||||||| |||||||||||||||||||||||||| ||||||||||    
T  40598456 agtctcgcaagtgttcatgctagtagataagctcaaataagtcaatccaaaca 40598404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 1418504 - 1418570
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||| |||| || |||| ||||| |||||| ||||||||||||||||||||| ||||||||||    
T  1418504 aagctctcacaaacagcctcataagtgcttatgccagtagataagctcaaataagtcaatccaaaca 1418570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 33894712 - 33894786
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||||| |||| ||||||||||||| |||||  | | |||||||||||||||| ||||||||||| |||||||    
T  33894712 aagctctcacaaacagtctcacaagtgcttatgtcatttgataagctcaaataagctaatccaaacatgccctta 33894786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 13960708 - 13960637
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||||||||||||||| |||||| |||||| | | ||||||||||||||||| ||||| || |||||||    
T  13960708 aagctctctcaaatagtctcgcaagtgcttatgc-aatggataagctcaaataagtcaatccgaataggccct 13960637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 31341223 - 31341286
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||| |||| ||||| | |||||||||||| |||||| |||||||||||||| ||||||||||    
T  31341223 ctctcccaaacagtcttaaaagtgtttatgcaagtagaaaagctcaaataagtcaatccaaaca 31341286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 25596145 - 25596191
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||| |||||||||||||||||||| | ||||||||||||||||    
T  25596145 ttatgctggtagataagctcaaataagtcagtccaaacaggccctta 25596191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 30751604 - 30751670
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||| |||| |||| |||||||| |||||  |||||||||| | |||||||||||||||||||    
T  30751604 aagctctcccaaacagtcgcacaagtgcttatgtcagtagataagtttaaataagttaatccaaaca 30751670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 40734801 - 40734731
Alignment:
Q  6 gctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||||||| | |||||||||| |||||  |||||||||||||||| |||||  || ||||||||||||    
T  40734801 gctctctcaaacaatctcacaagtatttatattagtagataagctcaagtaagtcgatgcaaacaggccct 40734731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 47042024 - 47041958
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||| |||| ||||||||||||||| |||  | |||||| |||||||||||| ||||||||||    
T  47042024 aagctctcacaaaaagtctcacaagtgttaatgtcaatagatatgctcaaataagtcaatccaaaca 47041958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 2048024 - 2047959
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    |||||||||| ||| |||||| |||||||||||||||||  | |||||||||| | ||||||||||    
T  2048024 ctctctcaaagagtatcacaaatgtttatgctagtagattggttcaaataagtcattccaaacagg 2047959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 8427107 - 8427168
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    |||| ||||||||||||  ||||| |||||||||||||||||||| | |||||||| |||||    
T  8427107 caaacagtctcacaagtacttatgttagtagataagctcaaataaatcaatccaaataggcc 8427168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 29363607 - 29363660
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    ||||||||||||| ||||| ||||||||||| |||||||||  |||||||||||    
T  29363607 agtctcacaagtgcttatgttagtagataagttcaaataagccaatccaaacag 29363660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 17942160 - 17942232
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcccttact 80  Q
    ||||||| | ||||||||| ||||||||   |||||||||||||||| |||| | |||||||||||| |||||    
T  17942160 tctctcagacagtctcacaggtgtttattgcagtagataagctcaaacaagtcattccaaacaggccattact 17942232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 28727748 - 28727672
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcccttact 80  Q
    ||||||||||||| |||||| |||||  ||| |  |  ||||||||||||||||||||||||||| |||| ||||||    
T  28727748 aagctctctcaaacagtctcgcaagttcttaggtcaaaagataagctcaaataagttaatccaaataggctcttact 28727672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 30496790 - 30496842
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaata 56  Q
    |||||||||||| ||||||| |||| | |||||||||||||||| ||||||||    
T  30496790 aagctctctcaagtagtctcgcaagggcttatgctagtagataaactcaaata 30496842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 35267434 - 35267506
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||| |||||||||| |||| ||||   |||| |||||||||||||||||||||| ||| |||| |||||||    
T  35267434 aagctttctcaaataggctcataagttcatatggtagtagataagctcaaataagtcaattcaaataggccct 35267506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 39542285 - 39542221
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    ||||||||| |||  ||||| |||||| |||||||||||||||| ||||||||||| || |||||    
T  39542285 aagctctctaaaactgtctcgcaagtgcttatgctagtagataaactcaaataagtcaacccaaa 39542221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 40252080 - 40252036
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||    
T  40252080 ttatgctagtagataagctcaaataagccaattcaaacaggccct 40252036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 44290017 - 44289957
Alignment:
Q  15 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||||||| ||||| ||||| | ||||||||||||||||||| ||| |||| ||||||    
T  44290017 aatagtctcaccagtgtctatgccactagataagctcaaataagtcaatgcaaataggccc 44289957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 46091686 - 46091742
Alignment:
Q  12 tcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||| ||||||||||| || |||| ||| ||||| ||||||||||||||||||||||    
T  46091686 tcaattagtctcacaaatgcttatactattagatgagctcaaataagttaatccaaa 46091742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 5276594 - 5276641
Alignment:
Q  23 cacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||||||||| |||||||||||||||  ||||| ||||||||||    
T  5276594 cacaagtgtttatgttagtagataagctcatctaagtcaatccaaaca 5276641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 32791720 - 32791665
Alignment:
Q  14 aaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 69  Q
    |||||||||||| |||| ||||||||||||||||||||  |||||  |||||||||    
T  32791720 aaatagtctcactagtgcttatgctagtagataagctctgataagccaatccaaac 32791665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 37064418 - 37064367
Alignment:
Q  39 agtagataagctcaaataagttaatccaaacaggcccttactcaagcatgtg 90  Q
    |||||||||| |||||||||| ||||||||||| |||||| | |||||||||    
T  37064418 agtagataagatcaaataagtcaatccaaacagacccttaattaagcatgtg 37064367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 3019885 - 3019935
Alignment:
Q  21 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||||  |||| ||||||||||||||||||||||| |||| ||||||    
T  3019885 ctcacaagtacttatactagtagataagctcaaataagtcaatcaaaacag 3019935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 7513663 - 7513709
Alignment:
Q  23 cacaagtgtttatgctagtagataagctcaaataagttaatccaaac 69  Q
    |||||||| |||||| ||||||||||||||||||||| ||| |||||    
T  7513663 cacaagtgcttatgccagtagataagctcaaataagtcaattcaaac 7513709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 12234860 - 12234802
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||||| ||| | |||| ||||||||||||||| ||||| |||||||| |||||||    
T  12234860 agtctcacacgtgctaatgccagtagataagctcaactaagtcaatccaaataggccct 12234802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 29287320 - 29287378
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    ||||||||||||| |||||||||  || ||||||| ||||||| ||| |||||||||||    
T  29287320 caaatagtctcacgagtgtttatattactagataaactcaaattagtcaatccaaacag 29287378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 34754795 - 34754721
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||||||| ||||||| |||||||| ||  | |||||||||||||| |||| || | ||| |||||||||    
T  34754795 aagctctctcaaacagtctcataagtgtttgtgtcaatagataagctcaaacaagtcaacctaaataggccctta 34754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 42839961 - 42839911
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataa 57  Q
    ||||| |||||||||||| ||||| ||||||||||| |||| |||||||||    
T  42839961 ctctcccaaatagtctcaaaagtgcttatgctagtacataatctcaaataa 42839911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 25659842 - 25659805
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaac 69  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  25659842 ttatgttagtagataatctcaaataagttaatccaaac 25659805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 28165176 - 28165225
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaa 53  Q
    ||||| ||||||| ||||||| ||||| ||||||| ||||||||||||||    
T  28165176 aagctatctcaaagagtctcataagtgcttatgctggtagataagctcaa 28165225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 28691807 - 28691754
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||||| || ||||| ||| |||||| ||||||||||| |||||||||||    
T  28691807 agtctcacaaatgcttatgttagcagataaactcaaataagtcaatccaaacag 28691754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 29269474 - 29269511
Alignment:
Q  27 agtgtttatgctagtagataagctcaaataagttaatc 64  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  29269474 agtgtttatgttagtacataagctcaaataagttaatc 29269511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 46281110 - 46281061
Alignment:
Q  21 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||| ||||||||||| ||||||||||| |||||||||  ||||||||||    
T  46281110 ctcaaaagtgtttatgttagtagataagttcaaataagccaatccaaaca 46281061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 47046071 - 47046026
Alignment:
Q  26 aagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||||||  ||||||||||| ||||||||| |||||||||||    
T  47046071 aagtgtttatgtcagtagataagcacaaataagtcaatccaaacag 47046026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 1710822 - 1710874
Alignment:
Q  12 tcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatc 64  Q
    ||||| ||| ||||||| | ||||| ||||||||||||||||||||| |||||    
T  1710822 tcaaacagtgtcacaagggattatgttagtagataagctcaaataagctaatc 1710874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 3610716 - 3610656
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    |||| ||| ||||||||| ||| || ||||||||||||||||||||  ||| |||||||||    
T  3610716 caaaaagtatcacaagtggttaggccagtagataagctcaaataagccaattcaaacaggc 3610656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 3836664 - 3836604
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||| |||| ||| ||||||||| ||| || ||||||||||||||||||||  ||||||||    
T  3836664 tctcccaaacagtttcacaagtgcttaagccagtagataagctcaaataaggcaatccaaa 3836604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 4970739 - 4970707
Alignment:
Q  42 agataagctcaaataagttaatccaaacaggcc 74  Q
    |||||||||||||||||| ||||||||||||||    
T  4970739 agataagctcaaataagtcaatccaaacaggcc 4970707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 5288200 - 5288248
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaata 56  Q
    |||| |||| ||||||| ||||| |||||||||||||| ||||||||||    
T  5288200 tctcccaaacagtctcataagtgcttatgctagtagattagctcaaata 5288248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 6977501 - 6977569
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    |||||| |||||| | |||||||| || |||||| | ||||||| ||| ||||||| ||||||||||||    
T  6977501 aagctcactcaaacaatctcacaaatgcttatgccaatagataaactctaataagtcaatccaaacagg 6977569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 12242329 - 12242401
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||||||||| ||||||||||| | |||||  ||||||| | ||||||||| | |||| |||||| ||||    
T  12242329 aagctctctcaaacagtctcacaagaggttatgtcagtagatcacctcaaataaatcaatcaaaacagaccct 12242401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 12792483 - 12792419
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    ||||||| | |||||||||| ||||||||||||  |||||||||| | |||||||| ||| ||||    
T  12792483 aagctctattaaatagtctctcaagtgtttatgtaagtagataagttgaaataagtcaattcaaa 12792419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 24363569 - 24363517
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    ||||| ||||| |||||||||||||||| |||||||||   ||||||||||||    
T  24363569 tctcataagtgcttatgctagtagataaactcaaataaaacaatccaaacagg 24363517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 27517287 - 27517223
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||||| ||||||||||||  |||||| ||||| | ||||||||||| | |||| ||||||    
T  27517287 ctctctcaaacagtctcacaagtaattatgccagtagcttagctcaaataattgaatcaaaacag 27517223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 28128369 - 28128316
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||||||| ||||||| ||||| |  |||||||||| ||||||||||||||||    
T  28128369 tctcacaagtgcttatgctcgtagaca--ctcaaataagctaatccaaacaggccc 28128316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 29278742 - 29278798
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaat 63  Q
    |||||||||| ||||  |||||||||||   |||||||||| |||||||||||||||    
T  29278742 ctctctcaaacagtcgaacaagtgtttactttagtagataaactcaaataagttaat 29278798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 30134252 - 30134284
Alignment:
Q  39 agtagataagctcaaataagttaatccaaacag 71  Q
    ||||||||||||||||||||||||| |||||||    
T  30134252 agtagataagctcaaataagttaattcaaacag 30134284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 33871330 - 33871386
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatc 64  Q
    |||| |||||||| || ||||||||||||  |||||||||||||||| |||| ||||    
T  33871330 tctcccaaatagtttcgcaagtgtttatgtaagtagataagctcaaaaaagtcaatc 33871386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 34083565 - 34083521
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||| ||||||| ||||||||||||| |||||||||| |||||    
T  34083565 ttatgcaagtagatgagctcaaataagtcaatccaaacatgccct 34083521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 36517690 - 36517734
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||| ||||| ||||||||||||| | ||||||||||||||||    
T  36517690 ttatgccagtagctaagctcaaataaatgaatccaaacaggccct 36517734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 40371601 - 40371565
Alignment:
Q  42 agataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||||||||||||||| |||||||||| |||||||    
T  40371601 agataagctcaaataagtcaatccaaacatgccctta 40371565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 9e-18; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 10199389 - 10199319
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||| |||||||| ||||||||| ||||| |||||||||||||||||||||| ||||||| ||||||||||    
T  10199389 tctcccaaatagtgtcacaagtgcttatgttagtagataagctcaaataagtcaatccaaccaggccctta 10199319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 6659765 - 6659830
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 69  Q
    ||||| || |||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  6659765 aagctatcccaaatagtctcacaagtgcttatgctagtagataagctaaaataagtcaatccaaac 6659830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 52013983 - 52014039
Alignment:
Q  15 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||||||||||    
T  52013983 aatagtctcacacgtgtttatgccaatagataagctcaaataagttaatccaaacag 52014039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 32515426 - 32515356
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    |||||||| |||| ||||||||||||| ||||| |||||||||| |||||||| | |||||||||||||||    
T  32515426 aagctctcccaaacagtctcacaagtgcttatgttagtagataaactcaaatatgctaatccaaacaggcc 32515356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 33723353 - 33723299
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    ||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  33723353 agtctcacaagtgtttatggtagtagataagttcaaataagtcaatccaaacagg 33723299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 9602630 - 9602568
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    |||||||||||||||||| ||| | ||||||||||||||| |||||| |||||||| ||||||    
T  9602630 caaatagtctcacaagtgcttaagttagtagataagctcagataagtcaatccaaataggccc 9602568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 15558310 - 15558368
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||||||||||||| || ||| ||||||||||||||| | ||||||||||||||||    
T  15558310 agtctcacaagtgtttaagccagtcgataagctcaaataactcaatccaaacaggccct 15558368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 2832075 - 2832120
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataagttaatccaa 67  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  2832075 tcacaagtgcttatgctagtagataagctcaaataagctaatccaa 2832120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 24460379 - 24460314
Alignment:
Q  11 ctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||| ||||||||||||| | |||  |||||||||| |||||||||| ||||||||||||||||    
T  24460379 ctcaaacagtctcacaagtgctcatgtcagtagataagttcaaataagtcaatccaaacaggccct 24460314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 29793672 - 29793619
Alignment:
Q  15 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| ||| ||||    
T  29793672 aatagtctcacaagtgtttatgtcagtagataagctcaaataagtcaatacaaa 29793619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 42550280 - 42550345
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 69  Q
    ||||||||||||| ||  ||||||||||||||||| |||||||| ||||| ||||| |||||||||    
T  42550280 aagctctctcaaagagcttcacaagtgtttatgctggtagataacctcaactaagtcaatccaaac 42550345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 4034002 - 4033934
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    ||||||||||||| | |||||||||||||||||| |||||| ||| |||||| ||| ||| ||||||||    
T  4034002 aagctctctcaaacaatctcacaagtgtttatgccagtagacaagttcaaatgagtcaatgcaaacagg 4033934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 14128442 - 14128382
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||||||| |||||||||||||||||||| ||| ||||  ||||||||||| |||||||    
T  14128442 agtctcacaaatgtttatgctagtagataagttcacataatctaatccaaacaagccctta 14128382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 21002249 - 21002313
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 77  Q
    |||| ||||||||||||  |||||| ||||||||||||||||||||  |||||||||| ||||||    
T  21002249 caaacagtctcacaagttcttatgcaagtagataagctcaaataagccaatccaaacaagccctt 21002313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 26866398 - 26866470
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||  |||||||||||| |||| ||| || ||||||||||||| |||||||| ||||||||||| ||||    
T  26866398 aagctcttccaaatagtctcagaagtatttgtgttagtagataagctgaaataagtcaatccaaacagaccct 26866470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 43420357 - 43420417
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||||||||||||||||   ||||||||||||||||||| |||||| ||||| ||||||    
T  43420357 agtctcacaagtgtttatgtctgtagataagctcaaataagctaatcctaacagaccctta 43420417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 1565115 - 1565064
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    ||||||||||| || ||||||||||||| |||||| ||||||||||||||||    
T  1565115 tctcacaagtgcttgtgctagtagataatctcaaaaaagttaatccaaacag 1565064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 4276626 - 4276563
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||||| |||| || |||||| || |||||||||||||||||| |||||||||| |||||    
T  4276626 caaatagtctaacaaatgcttatgccagaagataagctcaaataagtaaatccaaacatgccct 4276563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 26400063 - 26400130
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    ||||||||||||| | ||||||||||  ||||||||||| |||| ||||||||||  |||||||||||    
T  26400063 aagctctctcaaacaatctcacaagttattatgctagtatataatctcaaataagcaaatccaaacag 26400130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 28467521 - 28467584
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||| |||||||||||| ||||| | ||||||||| |||| ||||||||||| ||||||||||    
T  28467521 ctctcccaaatagtctcataagtgctaatgctagtaaataaactcaaataagtcaatccaaaca 28467584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 29793847 - 29793914
Alignment:
Q  9 ctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||||||||||||||||| ||||||| ||| ||||  |||||||||| ||| ||||||| ||||    
T  29793847 ctctcaaatagtctcacaagtgcttatgctggtaaataaattcaaataagtcaattcaaacagaccct 29793914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 1662658 - 1662712
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataag 58  Q
    |||||||| ||||||||||| || ||  |||||||||||||||||||||||||||    
T  1662658 aagctctcgcaaatagtctcgcatgtacttatgctagtagataagctcaaataag 1662712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 3319931 - 3319865
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||| ||||  ||||||| || || || ||||||||||||||||||||||||| ||||||||||    
T  3319931 aagctctttcaatcagtctcataattgcttttgctagtagataagctcaaataagtcaatccaaaca 3319865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7218062 - 7217988
Alignment:
Q  1 cacaagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||||| | |||| | ||||| ||||||||||||  ||||||||||| |||||||| |||||||||| ||||    
T  7218062 cacaagctcccccaaacaatctcagaagtgtttatgccggtagataagcttaaataagtcaatccaaacatgccc 7217988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 9507316 - 9507370
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataag 58  Q
    |||||||| |||| |||||||||| ||  ||||||||||||||||||||||||||    
T  9507316 aagctctcccaaacagtctcacaaatgcctatgctagtagataagctcaaataag 9507370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 4118856 - 4118807
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaa 53  Q
    ||||||| ||||| ||||||| |||||||||| |||||||||||||||||    
T  4118856 aagctctttcaaagagtctcaaaagtgtttatactagtagataagctcaa 4118807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 2522696 - 2522744
Alignment:
Q  19 gtctcacaagtgtttatgctagtagataagctcaaataagttaatccaa 67  Q
    |||| |||||||||||||| ||||||||| ||||||||||| |||||||    
T  2522696 gtcttacaagtgtttatgccagtagataaactcaaataagtcaatccaa 2522744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 5157157 - 5157221
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||||||| |||| ||| |||||||||||||||   ||||||||| |||||||||| ||||||||    
T  5157157 aagctctcccaaacagtttcacaagtgtttatgtccgtagataagttcaaataagtcaatccaaa 5157221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 11893562 - 11893514
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||||||||| ||| |||||||||||||| |||||||||| ||||||||    
T  11893562 tctcacaagtatttgtgctagtagataagttcaaataagtcaatccaaa 11893514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 15515657 - 15515701
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatc 64  Q
    ||||||| |||||||||| ||||||||||||||||||||| ||||    
T  15515657 tctcacacgtgtttatgccagtagataagctcaaataagtcaatc 15515701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 24279848 - 24279888
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataag 58  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  24279848 agtctcacaagtgtttatgctagtaaataagttcaaataag 24279888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 49282686 - 49282635
Alignment:
Q  16 atagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    ||||||||||||||||||||| ||||||| || |||||||||| |||||||||    
T  49282686 atagtctcacaagtgtttatgttagtagacaa-ctcaaataagctaatccaaa 49282635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 2295311 - 2295350
Alignment:
Q  39 agtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  2295311 agtagataagctcaaataagccaatccaaacaggccctta 2295350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 4757432 - 4757487
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    ||||| ||||||||||||||||||  | ||||||||||||||||||| || |||||    
T  4757432 caaatggtctcacaagtgtttatgtcaatagataagctcaaataagtcaaaccaaa 4757487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 16980888 - 16980943
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    ||||||||||||||||||||||||||  ||||| | ||| ||||| ||||||||||    
T  16980888 aagctctctcaaatagtctcacaagtacttatgttggtatataagttcaaataagt 16980943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 32958722 - 32958789
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    ||||||||  |||||  |||||||||| |||||  ||||||||||||||||||||| |||| ||||||    
T  32958722 aagctctccaaaataacctcacaagtgcttatgacagtagataagctcaaataagtcaatctaaacag 32958789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 37272579 - 37272508
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||||||||| | ||||||||||| ||| || |||||||||||||||| || | | | |||||||||||    
T  37272579 aagctctctcaaacaatctcacaagtgcttaagccagtagataagctcaaacaattcattacaaacaggccc 37272508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 4180718 - 4180652
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||| |||||| ||| ||||||| |||||| |||| ||||||  || ||||||||||||||||    
T  4180718 aagctctcacaaataatctgacaagtggttatgcaagtaaataagcaaaagtaagttaatccaaaca 4180652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 6292593 - 6292643
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||| ||||| |||||  ||||||||||||||||||||| ||||||||||    
T  6292593 tctcaaaagtgcttatgtcagtagataagctcaaataagtcaatccaaaca 6292643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 15477666 - 15477712
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||| ||||||||||||| ||||||  ||||||||||||||||||    
T  15477666 ttatgcaagtagataagctctaataagccaatccaaacaggccctta 15477712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 24313645 - 24313595
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||||||||| ||||||||||||| ||||||||  | ||||||||||    
T  24313645 tctcacaagtgtttgtgctagtagataaactcaaatagataaatccaaaca 24313595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 30014035 - 30013997
Alignment:
Q  33 tatgctagtagataagctcaaataagttaatccaaacag 71  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  30014035 tatgctagtagataaactcaaataagtcaatccaaacag 30013997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 30458027 - 30457977
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaa 54  Q
    |||||||| ||||||||||  ||| |||||||| |||||||||||||||||    
T  30458027 aagctctcccaaatagtctagcaactgtttatgttagtagataagctcaaa 30457977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 31517721 - 31517671
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataag 58  Q
    |||| |||| ||||||||||||| |||||| |||| |||||||||||||||    
T  31517721 tctcccaaacagtctcacaagtgcttatgccagtaaataagctcaaataag 31517671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 32859918 - 32859868
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    ||||||||||||  |||||||||||||||||||||| ||||| ||| ||||    
T  32859918 agtctcacaagtacttatgctagtagataagctcaagtaagtcaattcaaa 32859868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 35017683 - 35017721
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataag 58  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  35017683 tctcacaagtgtttatgccaatagataagctcaaataag 35017721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 71
Target Start/End: Original strand, 37431858 - 37431888
Alignment:
Q  41 tagataagctcaaataagttaatccaaacag 71  Q
    |||||||||||||||||||||||||||||||    
T  37431858 tagataagctcaaataagttaatccaaacag 37431888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 37593660 - 37593614
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    |||| ||||| |||||||||||||| |||| ||||||||||||||||    
T  37593660 caaacagtctaacaagtgtttatgccagtatataagctcaaataagt 37593614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 40304036 - 40303994
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    |||||| ||||||||| || |||||||||||||||||||||||    
T  40304036 ttatgccagtagataatctgaaataagttaatccaaacaggcc 40303994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 42575427 - 42575389
Alignment:
Q  31 tttatgctagtagataagctcaaataagttaatccaaac 69  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  42575427 tttatgctagtagataagctcaaataaggcaatccaaac 42575389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 6231785 - 6231748
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataa 57  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  6231785 tctcacaaatgtttatgctagtagataacctcaaataa 6231748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 7707278 - 7707339
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||||||||||| ||| |||||| ||||| |||||||||||  |||||||||| ||| ||||    
T  7707278 ctctctcaaataatcttacaagtatttatactagtagataaattcaaataagtcaatgcaaa 7707339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 15489258 - 15489197
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatcc 65  Q
    |||||||||||||| |||||| | ||| ||||||||||| |||| | ||||||||| |||||    
T  15489258 aagctctctcaaattgtctcataggtgcttatgctagtaaataaacccaaataagtcaatcc 15489197  T

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Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 24417712 - 24417655
Alignment:
Q  12 tcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 69  Q
    ||||||||||||||||||  ||||  || ||||||| ||||||||||| |||||||||    
T  24417712 tcaaatagtctcacaagtacttatattaatagataaactcaaataagtcaatccaaac 24417655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 25944536 - 25944581
Alignment:
Q  14 aaatagtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    |||||||||||||||||||||||  |||| |||||| |||||||||    
T  25944536 aaatagtctcacaagtgtttatgtcagtaaataagcgcaaataagt 25944581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 29723592 - 29723637
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataagttaatccaa 67  Q
    ||||||||| ||||||||||| |||||||||||| ||| |||||||    
T  29723592 tcacaagtgcttatgctagtaaataagctcaaattagtcaatccaa 29723637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 30257768 - 30257833
Alignment:
Q  4 aagctctctcaaatagtctcacaag-tgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    ||||||||  ||||||||||||||  ||||||||  ||||||||| ||||||||||| ||||||||    
T  30257768 aagctctcctaaatagtctcacaaaatgtttatgtcagtagataaactcaaataagtaaatccaaa 30257833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 33975676 - 33975725
Alignment:
Q  21 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||||| || || |||||||||||||||||||||| || |||||||    
T  33975676 ctcacaagtgcttgtgttagtagataagctcaaataagtgaacccaaaca 33975725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 50644211 - 50644174
Alignment:
Q  33 tatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  50644211 tatgttagtagataagctcaaataagtcaatccaaaca 50644174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 3597257 - 3597193
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 77  Q
    |||| ||||||||||||| ||||   | ||||||| ||||||||||| |||||||||||| ||||    
T  3597257 caaacagtctcacaagtggttatatcattagataacctcaaataagtcaatccaaacaggtcctt 3597193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 14737702 - 14737658
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataa 57  Q
    |||| ||||||||||||| |||| |||||| ||||||||||||||    
T  14737702 caaacagtctcacaagtgcttattctagtaaataagctcaaataa 14737658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 17269351 - 17269407
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||||||||||    || ||||||| |||||||||| ||||||||||||||||    
T  17269351 tctcacaagtgtttaaataagaagataagttcaaataagtcaatccaaacaggccct 17269407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 23373298 - 23373226
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||| |||| | ||||||||||| ||||   |||||| ||| |||||||||| ||| ||||||||||||    
T  23373298 aagctctcccaaacaatctcacaagtgcttatatcagtagacaagttcaaataagtcaattcaaacaggccct 23373226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 29045888 - 29045852
Alignment:
Q  34 atgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  29045888 atgctagtagataaactcaaataagtcaatccaaaca 29045852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 34536249 - 34536309
Alignment:
Q  10 tctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||| |||||||||||||||||||  | |||||| | |||||||||| | ||||||||    
T  34536249 tctcaaacagtctcacaagtgtttatgtcaatagatacgttcaaataagtcattccaaaca 34536309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 36523233 - 36523201
Alignment:
Q  44 ataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||| |||||||||||||||||||||||||    
T  36523233 ataagcttaaataagttaatccaaacaggccct 36523201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 37241789 - 37241738
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    |||| |||||| |||||| |||||||||||| |||||||| ||||||||||||    
T  37241789 tctcgcaagtgcttatgc-agtagataagcttaaataagtcaatccaaacagg 37241738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 40751106 - 40751035
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||| ||||| ||||||||||| ||||||  |||  |||||||||||||||| ||| ||||||| ||||    
T  40751106 aagctctcccaaat-gtctcacaagtttttatgtaagtgtataagctcaaataagtcaattcaaacagaccct 40751035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 43371876 - 43371836
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtaga 44  Q
    ||||||||||||| ||||||||||||| |||||| ||||||    
T  43371876 aagctctctcaaacagtctcacaagtgcttatgccagtaga 43371836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 14599357 - 14599285
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||||||||| | ||| ||||||||||||||||||| ||||| |||||||| | ||||||||||||||||    
T  14599357 aagctctctcaaacaatcttacaagtgtttatgctagtaaataagttcaaataactgaatccaaacaggccct 14599285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 31723890 - 31723954
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||||||  |||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  31723890 aagctcttacaaatagtctcataagtgtttatgctagtacataagctcaaataagtcaatccaaa 31723954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 9174912 - 9174975
Alignment:
Q  15 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||||| || |||||||||| ||||||||||||||||||| |||||||||| |||||||    
T  9174912 aatagtctcacgagcgtttatgctaatagataagctcaaataagtcaatccaaacatgccctta 9174975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 40335849 - 40335788
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    |||| |||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||    
T  40335849 caaacagtctcacaagtgtttgtgcgagtagataaactcaaataagtcaatccaaacaggcc 40335788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 25720402 - 25720334
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    ||||||||||| | ||||||||||||| |||||| ||||||||| |||||||||| |||| ||||||||    
T  25720402 aagctctctcagacagtctcacaagtgcttatgccagtagataacctcaaataagctaattcaaacagg 25720334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 41277350 - 41277274
Alignment:
Q  1 cacaagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 77  Q
    |||||||||||  ||| |||||||||||| |||||| ||||| ||||| |||||||| | |||||||||||||||||    
T  41277350 cacaagctctcctaaacagtctcacaagtatttatggtagtacataagttcaaataaataaatccaaacaggccctt 41277274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 8651326 - 8651263
Alignment:
Q  15 aatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||| |||||| |||||||||||||| |||||||||||||||||  |||||||||| |||||||    
T  8651326 aatactctcacgagtgtttatgctagaagataagctcaaataaggcaatccaaacatgccctta 8651263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 11153416 - 11153357
Alignment:
Q  19 gtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||| |||||||||||||||||||||||||||||| |||  ||||||||||| ||||||    
T  11153416 gtctcgcaagtgtttatgctagtagataagctcaaacaagccaatccaaacagcccctta 11153357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 34198506 - 34198573
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||| ||||||| || ||||||||||||||| ||||| |||| ||||||||||| |||||||||||    
T  34198506 aagctcgctcaaatggtatcacaagtgtttatgttagtaaataaactcaaataagtcaatccaaacag 34198573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 7705955 - 7705909
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  7705955 ttatgctagtagatatgctcaaataagtcaatccaaacaggccctta 7705909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 21782641 - 21782576
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 69  Q
    ||||||||||||| || ||||||||||||||||| |||||||||  |||||||||| || ||||||    
T  21782641 aagctctctcaaacagcctcacaagtgtttatgccagtagataatttcaaataagtcaagccaaac 21782576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 25705628 - 25705575
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    ||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||    
T  25705628 tctcacaagtgcttatgttagtagataagttcaaataatttaatccaaacaggc 25705575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 12242695 - 12242623
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||||||||||| |||||||| || | || | ||||||||  ||||||||||||||| ||||||||||||    
T  12242695 aagctctctcaaataatctcacaaatgctcataccagtagatagtctcaaataagttaatgcaaacaggccct 12242623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 26004962 - 26004914
Alignment:
Q  24 acaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  26004962 acaagtgcttatgctagtagataagctaaaataagtcaatccaaacagg 26004914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 36796678 - 36796626
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||||||||||||||  | ||||||||||||||||||| ||||||||||    
T  36796678 agtctcacaagtgtttatgtcattagataagctcaaataagtcaatccaaaca 36796626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 444011 - 444062
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    |||| |||| |||||||||||||||||||| | |||||||||||||||||||    
T  444011 tctcccaaacagtctcacaagtgtttatgcaattagataagctcaaataagt 444062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 6938695 - 6938648
Alignment:
Q  27 agtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  6938695 agtgcttatgctagtagataagctcaaataacctaatccaaacaggcc 6938648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 10638520 - 10638453
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||| |||||||||| ||||||| ||||| | |||||||| || |||||||| |||||||||||    
T  10638520 aagctctcccaaatagtcttacaagtgcttatgttggtagataatcttaaataagtcaatccaaacag 10638453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 10771868 - 10771809
Alignment:
Q  9 ctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||||||| | ||||||||||| |||||| ||||||||||||||||||||  ||||||||    
T  10771868 ctctcaaacaatctcacaagtgcttatgccagtagataagctcaaataagccaatccaaa 10771809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 11297181 - 11297114
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    ||||||| ||||| ||||| |||||||||||||| | |||||||||| |||||||| ||| |||||||    
T  11297181 aagctctttcaaacagtcttacaagtgtttatgccactagataagcttaaataagtcaattcaaacag 11297114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 38028621 - 38028692
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||||| ||||||||||| |||| || || | |||||||||||||||||||||   |||||||||||||    
T  38028621 aagctctctgaaatagtctcataagttttcataccagtagataagctcaaataagtcggtccaaacaggccc 38028692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 11104994 - 11105056
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||| |||||||| ||||||||| ||||||| || ||||||||||||||| | ||||||||||    
T  11104994 tctcccaaatagtatcacaagtgcttatgctggttgataagctcaaataaatcaatccaaaca 11105056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 35135635 - 35135569
Alignment:
Q  6 gctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    |||||| | |||||| ||||||||| |||||  |||||| ||||| |||||||||||||||||||||    
T  35135635 gctctcccgaatagtatcacaagtggttatgtcagtagagaagctgaaataagttaatccaaacagg 35135569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 42181070 - 42180992
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcccttactca 82  Q
    |||||||| ||||| ||||||||| ||  |||||||||| ||||| |||||| ||| ||||||||||| |||| |||||    
T  42181070 aagctctcccaaattgtctcacaaatgcatatgctagtaaataagttcaaattagtcaatccaaacagcccctgactca 42180992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 8090021 - 8090082
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatcc 65  Q
    |||||||||||||||||||| | |||| || || ||||||||||| |||||||||| |||||    
T  8090021 aagctctctcaaatagtctcgcgagtgcttgtgttagtagataagttcaaataagtcaatcc 8090082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 13508541 - 13508590
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 69  Q
    |||||||||||||||||| |||||||||| |||||||||| || ||||||    
T  13508541 tctcacaagtgtttatgccagtagataagttcaaataagtcaagccaaac 13508590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 35299887 - 35299924
Alignment:
Q  41 tagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  35299887 tagataagctcaaataagtcaatccaaacaggccctta 35299924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 4855780 - 4855840
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatc 64  Q
    ||||||||||||| ||||||||||||||||| |  | || |||||||||||||||| ||||    
T  4855780 aagctctctcaaacagtctcacaagtgtttaagtcattatataagctcaaataagtcaatc 4855840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 10303881 - 10303961
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcccttactcaag 84  Q
    ||||||||||||||| |||||||| || |||||   ||||||||||||||||| |  |||| |||||| |||||| |||||    
T  10303881 aagctctctcaaataatctcacaaatgcttatgtccgtagataagctcaaatatgccaatctaaacagacccttaatcaag 10303961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 11615619 - 11615575
Alignment:
Q  24 acaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    ||||||||||||| |||||||||||||||||||||  ||||||||    
T  11615619 acaagtgtttatgttagtagataagctcaaataagccaatccaaa 11615575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 12407715 - 12407659
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagtt 60  Q
    |||||||||||||  ||||||||||||||||||  | |||||||| |||||||||||    
T  12407715 aagctctctcaaaccgtctcacaagtgtttatgtcaatagataagttcaaataagtt 12407659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 14706253 - 14706205
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||||||||||||||||  ||||| ||||||||||||||| ||||||||    
T  14706253 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 14706205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 14980594 - 14980658
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    ||||||||||||| ||||||   |||| |||||| ||||||||||||||||||||| | ||||||    
T  14980594 aagctctctcaaacagtctctatagtgcttatgccagtagataagctcaaataagtcattccaaa 14980658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 16937840 - 16937800
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  16937840 ttatgctagtagataagctcaaataagccaatccaaacagg 16937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 35960498 - 35960569
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||||||||||||||| |||  || |||||| | | |||||||||||||||||||| ||||||| |||||    
T  35960498 aagctctctcaaatagtctgacat-tgcttatgccaattgataagctcaaataagttaacccaaacaagccct 35960569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 7550503 - 7550432
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||||||||| ||||||||||||  |||||  ||| |||||||||||||||   |||| ||||||||||    
T  7550503 aagctctctcaaagagtctcacaagtaattatgtcagtggataagctcaaataaaccaatcaaaacaggccc 7550432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 14331486 - 14331525
Alignment:
Q  39 agtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  14331486 agtagataagctcaaataagtcaatccaaacagaccctta 14331525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 17368775 - 17368826
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    ||||||||| |||||| |||||||||| | |||||||| |||||||||||||    
T  17368775 tcacaagtgcttatgccagtagataagtttaaataagtcaatccaaacaggc 17368826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 34975450 - 34975528
Alignment:
Q  5 agctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcccttactcaag 84  Q
    |||||| ||||| ||||||| ||||| ||||| |||||||||||||| ||||||| ||| ||||||  |||| |||||||    
T  34975450 agctctttcaaacagtctcataagtgattatgttagtagataagctc-aataagtcaattcaaacaacccctgactcaag 34975528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 41112865 - 41112830
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataa 57  Q
    |||||||||||||||| |||||||||||||||||||    
T  41112865 tcacaagtgtttatgcaagtagataagctcaaataa 41112830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 2092458 - 2092508
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||| ||||||| ||||||||||||||||| |||||||||||  |||||||    
T  2092458 agtcccacaagtatttatgctagtagataaactcaaataagtcgatccaaa 2092508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 8820873 - 8820911
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  8820873 ttatgctagtagataagatcaaataagtaaatccaaaca 8820911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 17369306 - 17369356
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    ||||||||| |||||  |||||||||| |||||||||| ||||||||||||    
T  17369306 tcacaagtgattatgtcagtagataagttcaaataagtcaatccaaacagg 17369356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 1899252 - 1899293
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    |||||||||  |||||||||||||| ||||||||||||||||    
T  1899252 agtctcacatatgtttatgctagtaaataagctcaaataagt 1899293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 5946524 - 5946487
Alignment:
Q  29 tgtttatgctagtagataagctcaaataagttaatcca 66  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  5946524 tgtttatgctagtagataagttcaaataagtcaatcca 5946487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 6717221 - 6717266
Alignment:
Q  26 aagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    ||||||||||||||| ||||||||| |||||||| ||| |||||||    
T  6717221 aagtgtttatgctagcagataagcttaaataagtcaattcaaacag 6717266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 6773363 - 6773298
Alignment:
Q  11 ctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||| |||||||  |||| || | |||||||| ||| |||||||||||||||||||||| ||||    
T  6773363 ctcaaacagtctcagtagtggttgtactagtagaaaagttcaaataagttaatccaaacagtccct 6773298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 11457197 - 11457238
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    |||||||||||||||| ||| | |||||||||||||||||||    
T  11457197 agtctcacaagtgtttctgccaatagataagctcaaataagt 11457238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 17259302 - 17259351
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaa 53  Q
    |||||| |||||  ||||||||||||| ||||| ||||||||||||||||    
T  17259302 aagctcactcaacaagtctcacaagtgcttatgttagtagataagctcaa 17259351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 19177533 - 19177594
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    ||||| |||| ||||||||||||||| |||| | ||| ||| ||||||||||| ||||||||    
T  19177533 ctctcccaaacagtctcacaagtgttcatgccaataggtaaactcaaataagtcaatccaaa 19177594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 29336715 - 29336784
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    ||||||||||||  ||||||||||||| || ||| | ||||||| ||||||| | | |||||||||||||    
T  29336715 aagctctctcaatcagtctcacaagtgcttttgccaatagataaactcaaatgattcaatccaaacaggc 29336784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 32172754 - 32172791
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataa 57  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  32172754 tctcacaagtgcttatgctagtatataagctcaaataa 32172791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 39594928 - 39594965
Alignment:
Q  40 gtagataagctcaaataagttaatccaaacaggccctt 77  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  39594928 gtagataagctcaaataagtcaatccaaacaagccctt 39594965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 6715901 - 6715869
Alignment:
Q  39 agtagataagctcaaataagttaatccaaacag 71  Q
    ||||||||||||| |||||||||||||||||||    
T  6715901 agtagataagctcgaataagttaatccaaacag 6715869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 10391443 - 10391499
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||||||| |||||| || ||||||||| |||||||  |||| |||||||||||    
T  10391443 tctcacaagtgattatgccagcagataagcttaaataagccaatcgaaacaggccct 10391499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 10640073 - 10640109
Alignment:
Q  39 agtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  10640073 agtagataaactcaaataagctaatccaaacaggccc 10640109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 10798393 - 10798341
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    |||||||||||  ||| |||||||||||||| |||||| | ||||||||||||    
T  10798393 tctcacaagtgcatatactagtagataagctaaaataaatcaatccaaacagg 10798341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11095483 - 11095427
Alignment:
Q  1 cacaagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataa 57  Q
    |||||| ||||||||| | | |||||||||||||||  |||||||||||| ||||||    
T  11095483 cacaagttctctcaaacaatatcacaagtgtttatgtcagtagataagcttaaataa 11095427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 18897681 - 18897633
Alignment:
Q  26 aagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    ||||| ||||||||||||||||| |||||||  | ||||||||||||||    
T  18897681 aagtgcttatgctagtagataagttcaaatacttcaatccaaacaggcc 18897633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 32849267 - 32849327
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||| |||| || |||||||||| ||||| ||||||||||||| |||||||| ||| ||||    
T  32849267 tctcccaaacagcctcacaagtgcttatgatagtagataagcttaaataagtcaattcaaa 32849327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 34117519 - 34117479
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataag 58  Q
    ||||| |||||||||||||| ||||||||||||| ||||||    
T  34117519 agtctaacaagtgtttatgccagtagataagctccaataag 34117479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 39257365 - 39257325
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataag 58  Q
    ||||||||||||| ||||| ||||||||||||| |||||||    
T  39257365 agtctcacaagtgcttatgttagtagataagcttaaataag 39257325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 42034167 - 42034215
Alignment:
Q  26 aagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    ||||| |||||  ||||| |||||||||||||| |||||||||||||||    
T  42034167 aagtgcttatgtcagtaggtaagctcaaataagctaatccaaacaggcc 42034215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 6895 - 6950
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    |||||||| |||| |||||||||||||||||||||||||||||| |||||||||||    
T  6895 aagctctcccaaacagtctcacaagtgtttatgctagtagataaactcaaataagt 6950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 41170704 - 41170763
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||  ||||||||||||    
T  41170704 caaatagtctcacaagtgtttatgttagtagataaactcaaataagccaatccaaacagg 41170763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 9996823 - 9996897
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||||| |||  ||||||||||||  |||||||||| ||||||||||||||||| || |||||||||||||||    
T  9996823 aagctctcccaagcagtctcacaagtacttatgctagttgataagctcaaataagtcaagccaaacaggccctta 9996897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 13866967 - 13867029
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||||| || ||||||||||    
T  13866967 tctctcaaacagtctcacaagtgtttatggcagtagataagctcaaataggtcaatccaaaca 13867029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 15370299 - 15370238
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    |||| |||||||||| || |||||| ||||||||||||||||||||| ||||||||||||||    
T  15370299 caaacagtctcacaaatgcttatgccagtagataagctcaaataagtcaatccaaacaggcc 15370238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 28810420 - 28810363
Alignment:
Q  21 ctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||||||||||| | |||| |||||||||||||| ||||||||||||||||||    
T  28810420 ctcacaagtgtttatgccaatagagaagctcaaataagtcaatccaaacaggccctta 28810363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 6547974 - 6548041
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||| |||||| ||||||||||||  |||||||||||||||||||  ||||||| |||||||||||    
T  6547974 aagctccctcaaacagtctcacaagttcttatgctagtagataagcttgaataagtcaatccaaacag 6548041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 15120268 - 15120335
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||| |||| ||  |||||| |||||||||||||||||||| |||||||||| |||||||||||    
T  15120268 aagctctcccaaacagattcacaactgtttatgctagtagataagttcaaataagtcaatccaaacag 15120335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 10563546 - 10563472
Alignment:
Q  3 caagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 77  Q
    ||||||||| ||||||   |||||| || ||||||| ||||||||| |||||||||| |||||||||||||||||    
T  10563546 caagctctcccaaataacttcacaattgcttatgctggtagataagttcaaataagtcaatccaaacaggccctt 10563472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 11513981 - 11514047
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||| |||||||||   ||||||||||    
T  11513981 aagctctctaaaacagtctcacaagtgcttatgctagtagataatctcaaataaaccaatccaaaca 11514047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 28803511 - 28803445
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    ||||||||| ||||||||| ||| ||||||  |||||||||||||||||||| |||||||| |||||    
T  28803511 tctctcaaacagtctcacatgtgcttatgccggtagataagctcaaataagtcaatccaaataggcc 28803445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 2964787 - 2964722
Alignment:
Q  11 ctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||| | |||| |||||||||||||  ||||||||| ||||||||||||||||||||| |||||    
T  2964787 ctcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaacatgccct 2964722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 33931537 - 33931481
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||| |||| ||||||    
T  33931537 tcacaagtgcttatgctattaggtaagctcaaataagttaatccagacagaccctta 33931481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 43456695 - 43456627
Alignment:
Q  1 cacaagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 69  Q
    |||||||||| ||||| ||||| |||||||||||||  |||| ||||| |||||||||| |||||||||    
T  43456695 cacaagctctttcaaacagtcttacaagtgtttatgtgagtaaataagttcaaataagtaaatccaaac 43456627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 449960 - 450003
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    |||||||||||||||||||||||||||||||| |||||| ||||    
T  449960 ttatgctagtagataagctcaaataagttaatgcaaacatgccc 450003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 3078593 - 3078526
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||  |||||||| | |||||||||| || | |||||||||||||||||||| |||||||||||    
T  3078593 aagctcttccaaatagtttgacaagtgtttgtgttggtagataagctcaaataagtcaatccaaacag 3078526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 35809953 - 35810012
Alignment:
Q  5 agctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatc 64  Q
    ||||||| ||||||||||||||| || ||||||  |||||||||||||||||||| ||||    
T  35809953 agctctcccaaatagtctcacaactgcttatgccggtagataagctcaaataagtcaatc 35810012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 36677737 - 36677804
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatg-ctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||||  |||||||||||||||| ||||| | | ||||||| ||||||||||||||||||||||    
T  36677737 aagctctcttgaatagtctcacaagtgcttatgtcaaatagataaactcaaataagttaatccaaaca 36677804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 22878187 - 22878249
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||| |||| ||||||||||||| |||||  ||| ||||||||||||||||| ||||||||||    
T  22878187 tctcccaaacagtctcacaagtgcttatgtcagtggataagctcaaataagtcaatccaaaca 22878249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 35329787 - 35329737
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||| |||||||||| ||||||||||||||| |||||| ||||||||||    
T  35329787 tctcactagtgtttatggtagtagataagctcacataagtcaatccaaaca 35329737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 43259938 - 43259996
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcccttact 80  Q
    ||||||||| ||||||||||||||||| |||||||||  ||||||||||  ||||||||    
T  43259938 tcacaagtgcttatgctagtagataagttcaaataagccaatccaaacaatcccttact 43259996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 2790337 - 2790397
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||| ||||||  |||| |||||||||||| |||||||||  ||||||||||||||||||    
T  2790337 agtctgacaagtacttatactagtagataagttcaaataagccaatccaaacaggccctta 2790397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 29430852 - 29430896
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataa 57  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||    
T  29430852 caaatagtcccacaagtgtttatgtcagtagataagctcaaataa 29430896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 33981222 - 33981270
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatcca 66  Q
    ||||||||||||| ||| |||||||| |||||||||||||| |||||||    
T  33981222 agtctcacaagtgcttaagctagtaggtaagctcaaataagctaatcca 33981270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 35713286 - 35713338
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    |||||||||||||||||||| ||||||| ||||||||||| | ||| ||||||    
T  35713286 agtctcacaagtgtttatgcaagtagattagctcaaataaatcaatacaaaca 35713338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 39567945 - 39567981
Alignment:
Q  22 tcacaagtgtttatgctagtagataagctcaaataag 58  Q
    ||||||||||||||||| |||||||||||||||||||    
T  39567945 tcacaagtgtttatgctggtagataagctcaaataag 39567981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 40759259 - 40759315
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    ||||||||||||| |||||  | ||||||||||||||||||  ||||||||||||||    
T  40759259 agtctcacaagtgcttatgtcaatagataagctcaaataaggcaatccaaacaggcc 40759315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 1318321 - 1318391
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    |||||||| |||| ||||||||||||| |||||| ||||||||| ||||||| | | ||| |||||||||||    
T  1318321 aagctctcacaaacagtctcacaagtgcttatgc-agtagataatctcaaattactcaattcaaacaggccc 1318391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 12313142 - 12313087
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||||||| |||||||||| | |||| ||||||||| |||| |||||||||||    
T  12313142 tctcacaagtgcttatgctagtgggtaagatcaaataagctaatacaaacaggccc 12313087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 14302921 - 14302960
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataa 57  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  14302921 agtctcacaaatgtttatgctaatagataagctcaaataa 14302960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 18179062 - 18179101
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  18179062 ttatgttagtagataagctcaaataagtcaatccaaacag 18179101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 33197243 - 33197180
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||||||||||||||||| |  |||  ||| ||||| ||||||||||| ||||||||||    
T  33197243 ctctctcaaatagtctcacaagtatcaatgtcagttgataaactcaaataagtcaatccaaaca 33197180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 757534 - 757608
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||| ||| |||| ||||||| |||| |||||||||||| ||||||||||||| |  || ||||||| |||||||    
T  757534 aagccctcccaaacagtctcataagtatttatgctagtaaataagctcaaatatgccaacccaaacaagccctta 757608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 3973629 - 3973695
Alignment:
Q  6 gctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacagg 72  Q
    ||||||||||| ||||| | ||||| ||||   ||| ||||||||||||||||| ||||||||||||    
T  3973629 gctctctcaaacagtcttataagtgcttatatcagtggataagctcaaataagtgaatccaaacagg 3973695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 76
Target Start/End: Original strand, 26202151 - 26202185
Alignment:
Q  42 agataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||| |||||||||||||||||||||||||||    
T  26202151 agataagttcaaataagttaatccaaacaggccct 26202185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 37474850 - 37474919
Alignment:
Q  4 aagctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    ||||||||||||| ||||||| ||||||||||| || ||||||| |||  ||||| ||||||||| |||||    
T  37474850 aagctctctcaaagagtctcataagtgtttatg-taatagataaactcggataagctaatccaaataggcc 37474919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 1830143 - 1830196
Alignment:
Q  23 cacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||| |||||  |||| |||| ||||||||||| ||||||||||||||||    
T  1830143 cacaagtgcttatgtcagtaaataaactcaaataagtcaatccaaacaggccct 1830196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 5043517 - 5043476
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    ||||||||||||||||| |||||||||| |||||||| ||||    
T  5043517 ttatgctagtagataaggtcaaataagtcaatccaaaaaggc 5043476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 7928246 - 7928209
Alignment:
Q  41 tagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  7928246 tagataagctcaaataagccaatccaaacaggccctta 7928209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 24097916 - 24097961
Alignment:
Q  26 aagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||||| | |||||| |||||||||||| |||||||||||||    
T  24097916 aagtgtttatccaagtagacaagctcaaataaattaatccaaacag 24097961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 27317500 - 27317533
Alignment:
Q  40 gtagataagctcaaataagttaatccaaacaggc 73  Q
    |||||||||||||||||||| |||||||||||||    
T  27317500 gtagataagctcaaataagtcaatccaaacaggc 27317533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 33503111 - 33503152
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    |||||||||||||||||||||||||||  ||| |||||||||    
T  33503111 ttatgctagtagataagctcaaataagccaatacaaacaggc 33503152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 37276838 - 37276899
Alignment:
Q  13 caaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    |||| ||||||||||||| ||||  |||||||||| || ||||||||  |||||||||||||    
T  37276838 caaacagtctcacaagtgcttatattagtagataaacttaaataagtcgatccaaacaggcc 37276899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 37448734 - 37448693
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    ||||||| |||||||||||||||||||| |||| ||||||||    
T  37448734 ttatgctggtagataagctcaaataagtcaatctaaacaggc 37448693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 38077054 - 38076985
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctt 77  Q
    ||||||||| | |||||||||||||||||  | |||| ||||||||||| || |||| |||||| |||||    
T  38077054 tctctcaaacaatctcacaagtgtttatgtgaatagaaaagctcaaatatgtcaatcgaaacagaccctt 38076985  T

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Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 39983434 - 39983499
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    ||||||||  |||||||||||  |||||||  |||||||| ||||||||||  |||||||||||||    
T  39983434 tctctcaatcagtctcacaaggatttatgccggtagataacctcaaataagcaaatccaaacaggc 39983499  T

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Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 43569808 - 43569861
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    |||||||| ||||||||| ||| ||||| ||||||||||| ||| |||||||||    
T  43569808 tctcacaaatgtttatgccagtggataacctcaaataagtcaattcaaacaggc 43569861  T

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Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 43910993 - 43910929
Alignment:
Q  8 tctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    |||||||||||||||||||| || |||| || | | |||| ||||||||||| |||||||||||||    
T  43910993 tctctcaaatagtctcacaaatgcttattctggaa-ataaactcaaataagtcaatccaaacaggc 43910929  T

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Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 1633457 - 1633421
Alignment:
Q  32 ttatgctagtagataagctcaaataagttaatccaaa 68  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  1633457 ttatgctagtagataaactcaaataagtaaatccaaa 1633421  T

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Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 3673893 - 3673949
Alignment:
Q  4 aagctctctcaaatagtctc-acaagtgtttatgctagtagataagctcaaataagt 59  Q
    |||||||| | ||||||||| ||||||||||||| |||| ||||| |||||||||||    
T  3673893 aagctctccctaatagtctccacaagtgtttatgttagttgataaactcaaataagt 3673949  T

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Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 4607046 - 4607082
Alignment:
Q  40 gtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||||||||||||||  ||||||||||||||||    
T  4607046 gtagataagctcaaataagccaatccaaacaggccct 4607082  T

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Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 6772482 - 6772446
Alignment:
Q  40 gtagataagctcaaataagttaatccaaacaggccct 76  Q
    |||||||||||||||||||| |||||||||| |||||    
T  6772482 gtagataagctcaaataagtcaatccaaacatgccct 6772446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 11063288 - 11063352
Alignment:
Q  14 aaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    |||||||||| ||| || || || ||||||||||| ||||||||| |||||||||| | ||||||    
T  11063288 aaatagtctcgcaaatgcttgtgttagtagataagttcaaataagctaatccaaacggaccctta 11063352  T

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Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 14666648 - 14666688
Alignment:
Q  19 gtctcacaagtgtttatgctagtagataagctcaaataagt 59  Q
    ||||||||||||||||||  |||| ||||||||||||||||    
T  14666648 gtctcacaagtgtttatggaagtaaataagctcaaataagt 14666688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 15200317 - 15200249
Alignment:
Q  5 agctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggc 73  Q
    ||||||| |||| ||||||||||||  |||||| |  |||||||||||||||| | ||||| |||||||    
T  15200317 agctctcacaaacagtctcacaagtacttatgccaacagataagctcaaataaatcaatccgaacaggc 15200249  T

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Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 21280337 - 21280273
Alignment:
Q  5 agctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaac 69  Q
    |||||||||||| | |||| |||||||||||   |||||||||| ||||| |||| |||||||||    
T  21280337 agctctctcaaaaattctcccaagtgtttatatgagtagataagttcaaacaagtcaatccaaac 21280273  T

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Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 25609895 - 25609935
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataag 58  Q
    ||||||||||||  ||||| |||||||||||||||||||||    
T  25609895 agtctcacaagttcttatgttagtagataagctcaaataag 25609935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 30990401 - 30990357
Alignment:
Q  27 agtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||| ||||| |||||||||||||||||||||  |||||||||||    
T  30990401 agtgcttatgttagtagataagctcaaataagccaatccaaacag 30990357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 31739951 - 31739919
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctca 52  Q
    ||||||||||||||||| |||||||||||||||    
T  31739951 tctcacaagtgtttatgttagtagataagctca 31739919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 35378497 - 35378445
Alignment:
Q  24 acaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccct 76  Q
    ||||||| |||||||| || |||||||||||||||  |||||||||| |||||    
T  35378497 acaagtgcttatgctattatataagctcaaataagccaatccaaacatgccct 35378445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 35810774 - 35810726
Alignment:
Q  20 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 68  Q
    ||||||||||| |||||||||||||||||||  |||||| | |||||||    
T  35810774 tctcacaagtgcttatgctagtagataagctggaataagctgatccaaa 35810726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 38767553 - 38767493
Alignment:
Q  18 agtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccctta 78  Q
    ||||||||||||| |||||| |||||||||||||  |||||  |||| ||||||| |||||    
T  38767553 agtctcacaagtgcttatgccagtagataagctcgtataagccaatctaaacagggcctta 38767493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 45425299 - 45425363
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacag 71  Q
    |||||||||| ||| ||| |||||||||| | |||| |||||||||||||| | || ||||||||    
T  45425299 ctctctcaaacagtttcataagtgtttatcccagtaaataagctcaaataactcaacccaaacag 45425363  T

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Target: scaffold0020 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 159948 - 159887
Alignment:
Q  14 aaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggccc 75  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||  |||||||||||||||    
T  159948 aaatagtttcacaagtgtttatattagtagataagctcaaataagccaatccaaacaggccc 159887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 9761 - 9693
Alignment:
Q  6 gctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaacaggcc 74  Q
    |||||| |||| |||||||||||| |||||| |||||||||| ||||||||| | |||| ||| |||||    
T  9761 gctctcccaaacagtctcacaagtatttatgttagtagataaactcaaataaatcaatctaaataggcc 9693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 6634 - 6697
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||||  |||||||||||| |||| | | || |||||||||||||||| ||||||||||    
T  6634 ctctctcaaactgtctcacaagtgattataccaatatataagctcaaataagtcaatccaaaca 6697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 6632 - 6695
Alignment:
Q  7 ctctctcaaatagtctcacaagtgtttatgctagtagataagctcaaataagttaatccaaaca 70  Q
    ||||||||||  |||||||||||| |||| | | || |||||||||||||||| ||||||||||    
T  6632 ctctctcaaactgtctcacaagtgattataccaatatataagctcaaataagtcaatccaaaca 6695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 12686 - 12641
Alignment:
Q  19 gtctcacaagtgtttatgctagtagataagctcaaataagttaatc 64  Q
    |||||||||||| |||||||||| |||||| |||||||||| ||||    
T  12686 gtctcacaagtgcttatgctagtggataagttcaaataagtcaatc 12641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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